Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:38:15 (65124): wrapper (7.7.26015): starting
05:38:15 (65124): wrapper: running run_atlas (--nthreads 8)
[2024-06-18 05:38:15] Arguments: --nthreads 8
[2024-06-18 05:38:15] Threads: 8
[2024-06-18 05:38:15] Checking for CVMFS
[2024-06-18 05:38:15] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-18 05:38:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-18 05:38:16] Running cvmfs_config stat atlas.cern.ch
[2024-06-18 05:38:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-18 05:38:17] 2.11.2.0 58123 40892 198240 134004 0 142 17320148 18432001 8999 130560 0 271358089 98.943 571418360 41390 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-06-18 05:38:17] CVMFS is ok
[2024-06-18 05:38:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-18 05:38:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-18 05:38:17] Further information can be found at the LHC@home message board.
[2024-06-18 05:38:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-18 05:38:17] Checking for apptainer binary...
[2024-06-18 05:38:17] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-18 05:38:17] Running /usr/bin/apptainer --version
[2024-06-18 05:38:17] apptainer version 1.3.2-1.el7
[2024-06-18 05:38:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-18 05:38:24] c-211-40.aglt2.org
[2024-06-18 05:38:24] apptainer works
[2024-06-18 05:38:24] Set ATHENA_PROC_NUMBER=8
[2024-06-18 05:38:24] Set ATHENA_CORE_NUMBER=8
[2024-06-18 05:38:24] Starting ATLAS job with PandaID=6235500665
[2024-06-18 05:38:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-18 13:10:05]  *** The last 200 lines of the pilot log: ***
[2024-06-18 13:10:05] 2024-06-18 17:09:41,923 | INFO     | monitor loop #1932: job 0:6235500665 is in state 'finished'
[2024-06-18 13:10:05] 2024-06-18 17:09:41,927 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-18 13:10:05] 2024-06-18 17:09:42,909 | INFO     | CPU arch script returned: x86-64-v3
[2024-06-18 13:10:05] 2024-06-18 17:09:42,910 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6235500665/memory_monitor_summary.json (trf name=prmon)
[2024-06-18 13:10:05] 2024-06-18 17:09:42,911 | INFO     | extracted standard info from prmon json
[2024-06-18 13:10:05] 2024-06-18 17:09:42,911 | INFO     | extracted standard memory fields from prmon json
[2024-06-18 13:10:05] 2024-06-18 17:09:42,911 | WARNING  | GPU info not found in prmon json
[2024-06-18 13:10:05] 2024-06-18 17:09:42,911 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-18 13:10:05] 2024-06-18 17:09:42,911 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-18 13:10:05] 2024-06-18 17:09:42,926 | INFO     | fitting pss+swap vs Time
[2024-06-18 13:10:05] 2024-06-18 17:09:42,926 | INFO     | model: linear, x: [1718703800.0, 1718703861.0, 1718703922.0, 1718703983.0, 1718704044.0, 1718704105.0, 1718704166.0, 1718704227.0, 1718704288.0, 1718704349.0, 1718
[2024-06-18 13:10:05] 2024-06-18 17:09:42,927 | INFO     | sum of square deviations: 26055462195.497887
[2024-06-18 13:10:05] 2024-06-18 17:09:42,942 | INFO     | sum of deviations: 736111984523.5426
[2024-06-18 13:10:05] 2024-06-18 17:09:42,942 | INFO     | mean x: 1718717128.502283
[2024-06-18 13:10:05] 2024-06-18 17:09:42,942 | INFO     | mean y: 2402327.4566210047
[2024-06-18 13:10:05] 2024-06-18 17:09:42,942 | INFO     | -- intersect: -48554336632.0629
[2024-06-18 13:10:05] 2024-06-18 17:09:42,942 | INFO     | intersect: -48554336632.0629
[2024-06-18 13:10:05] 2024-06-18 17:09:42,943 | INFO     | chi2: 14.011707528933384
[2024-06-18 13:10:05] 2024-06-18 17:09:42,943 | INFO     | model: linear, x: [1718703800.0, 1718703861.0, 1718703922.0, 1718703983.0, 1718704044.0, 1718704105.0, 1718704166.0, 1718704227.0, 1718704288.0, 1718704349.0, 1718
[2024-06-18 13:10:05] 2024-06-18 17:09:42,943 | INFO     | sum of square deviations: 25173297122.99775
[2024-06-18 13:10:05] 2024-06-18 17:09:42,949 | INFO     | sum of deviations: 755775782328.2974
[2024-06-18 13:10:05] 2024-06-18 17:09:42,949 | INFO     | mean x: 1718716976.0023096
[2024-06-18 13:10:05] 2024-06-18 17:09:42,950 | INFO     | mean y: 2405678.7020785217
[2024-06-18 13:10:05] 2024-06-18 17:09:42,950 | INFO     | -- intersect: -51598489539.44424
[2024-06-18 13:10:05] 2024-06-18 17:09:42,950 | INFO     | intersect: -51598489539.44424
[2024-06-18 13:10:05] 2024-06-18 17:09:42,950 | INFO     | chi2: 13.226466123878735
[2024-06-18 13:10:05] 2024-06-18 17:09:42,950 | INFO     | current chi2=13.226466123878735 (change=5.604180671293413 %)
[2024-06-18 13:10:05] 2024-06-18 17:09:42,950 | INFO     | right removable region: 432
[2024-06-18 13:10:05] 2024-06-18 17:09:42,955 | INFO     | model: linear, x: [1718704105.0, 1718704166.0, 1718704227.0, 1718704288.0, 1718704349.0, 1718704410.0, 1718704471.0, 1718704532.0, 1718704593.0, 1718704654.0, 1718
[2024-06-18 13:10:05] 2024-06-18 17:09:42,955 | INFO     | sum of square deviations: 25173296512.99775
[2024-06-18 13:10:05] 2024-06-18 17:09:42,963 | INFO     | sum of deviations: 598303581107.8818
[2024-06-18 13:10:05] 2024-06-18 17:09:42,963 | INFO     | mean x: 1718717281.0023096
[2024-06-18 13:10:05] 2024-06-18 17:09:42,963 | INFO     | mean y: 2426139.11778291
[2024-06-18 13:10:05] 2024-06-18 17:09:42,963 | INFO     | -- intersect: -40846999505.423164
[2024-06-18 13:10:05] 2024-06-18 17:09:42,963 | INFO     | intersect: -40846999505.423164
[2024-06-18 13:10:05] 2024-06-18 17:09:42,964 | INFO     | chi2: 9.995003958041663
[2024-06-18 13:10:05] 2024-06-18 17:09:42,964 | INFO     | current chi2=9.995003958041663 (change=28.666767148810774 %)
[2024-06-18 13:10:05] 2024-06-18 17:09:42,964 | INFO     | model: linear, x: [1718704410.0, 1718704471.0, 1718704532.0, 1718704593.0, 1718704654.0, 1718704715.0, 1718704776.0, 1718704837.0, 1718704898.0, 1718704959.0, 1718
[2024-06-18 13:10:05] 2024-06-18 17:09:42,964 | INFO     | sum of square deviations: 24311270742.997765
[2024-06-18 13:10:05] 2024-06-18 17:09:42,972 | INFO     | sum of deviations: 505365768560.09375
[2024-06-18 13:10:05] 2024-06-18 17:09:42,972 | INFO     | mean x: 1718717433.5023365
[2024-06-18 13:10:05] 2024-06-18 17:09:42,972 | INFO     | mean y: 2442578.9065420562
[2024-06-18 13:10:05] 2024-06-18 17:09:42,972 | INFO     | -- intersect: -35725058706.467964
[2024-06-18 13:10:05] 2024-06-18 17:09:42,973 | INFO     | intersect: -35725058706.467964
[2024-06-18 13:10:05] 2024-06-18 17:09:42,973 | INFO     | chi2: 8.382825688934732
[2024-06-18 13:10:05] 2024-06-18 17:09:42,973 | INFO     | current chi2=8.382825688934732 (change=16.12984122742466 %)
[2024-06-18 13:10:05] 2024-06-18 17:09:42,973 | INFO     | left removable region: 20
[2024-06-18 13:10:05] 2024-06-18 17:09:42,973 | INFO     | model: linear, x: [1718705020.0, 1718705081.0, 1718705142.0, 1718705203.0, 1718705264.0, 1718705325.0, 1718705386.0, 1718705447.0, 1718705508.0, 1718705569.0, 1718
[2024-06-18 13:10:05] 2024-06-18 17:09:42,974 | INFO     | sum of square deviations: 21685420334.997787
[2024-06-18 13:10:05] 2024-06-18 17:09:42,982 | INFO     | sum of deviations: 363711472890.90497
[2024-06-18 13:10:05] 2024-06-18 17:09:42,982 | INFO     | mean x: 1718717555.502427
[2024-06-18 13:10:05] 2024-06-18 17:09:42,982 | INFO     | mean y: 2476729.594660194
[2024-06-18 13:10:05] 2024-06-18 17:09:42,982 | INFO     | -- intersect: -28824139676.192764
[2024-06-18 13:10:05] 2024-06-18 17:09:42,982 | INFO     | intersect: -28824139676.192764
[2024-06-18 13:10:05] 2024-06-18 17:09:42,986 | INFO     | chi2: 5.065771007625487
[2024-06-18 13:10:05] 2024-06-18 17:09:42,986 | INFO     | -- intersect: -28824139676.192764
[2024-06-18 13:10:05] 2024-06-18 17:09:42,986 | INFO     | current memory leak: 16.77 B/s (using 412 data points, chi2=5.07)
[2024-06-18 13:10:05] 2024-06-18 17:09:42,986 | INFO     | ..............................
[2024-06-18 13:10:05] 2024-06-18 17:09:42,987 | INFO     | . Timing measurements:
[2024-06-18 13:10:05] 2024-06-18 17:09:42,987 | INFO     | . get job = 0 s
[2024-06-18 13:10:05] 2024-06-18 17:09:42,987 | INFO     | . initial setup = 5 s
[2024-06-18 13:10:05] 2024-06-18 17:09:42,987 | INFO     | . payload setup = 57 s
[2024-06-18 13:10:05] 2024-06-18 17:09:42,987 | INFO     | . stage-in = 0 s
[2024-06-18 13:10:05] 2024-06-18 17:09:42,987 | INFO     | . payload execution = 26776 s
[2024-06-18 13:10:05] 2024-06-18 17:09:42,987 | INFO     | . stage-out = 4 s
[2024-06-18 13:10:05] 2024-06-18 17:09:42,987 | INFO     | . log creation = 1 s
[2024-06-18 13:10:05] 2024-06-18 17:09:42,987 | INFO     | ..............................
[2024-06-18 13:10:05] 2024-06-18 17:09:43,586 | INFO     | 
[2024-06-18 13:10:05] 2024-06-18 17:09:43,586 | INFO     | job summary report
[2024-06-18 13:10:05] 2024-06-18 17:09:43,586 | INFO     | --------------------------------------------------
[2024-06-18 13:10:05] 2024-06-18 17:09:43,586 | INFO     | PanDA job id: 6235500665
[2024-06-18 13:10:05] 2024-06-18 17:09:43,586 | INFO     | task id: 38921013
[2024-06-18 13:10:05] 2024-06-18 17:09:43,586 | INFO     | errors: (none)
[2024-06-18 13:10:05] 2024-06-18 17:09:43,586 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-18 13:10:05] 2024-06-18 17:09:43,586 | INFO     | pilot state: finished 
[2024-06-18 13:10:05] 2024-06-18 17:09:43,588 | INFO     | transexitcode: 0
[2024-06-18 13:10:05] 2024-06-18 17:09:43,588 | INFO     | exeerrorcode: 0
[2024-06-18 13:10:05] 2024-06-18 17:09:43,588 | INFO     | exeerrordiag: 
[2024-06-18 13:10:05] 2024-06-18 17:09:43,588 | INFO     | exitcode: 0
[2024-06-18 13:10:05] 2024-06-18 17:09:43,588 | INFO     | exitmsg: OK
[2024-06-18 13:10:05] 2024-06-18 17:09:43,588 | INFO     | cpuconsumptiontime: 134245 s
[2024-06-18 13:10:05] 2024-06-18 17:09:43,588 | INFO     | nevents: 400
[2024-06-18 13:10:05] 2024-06-18 17:09:43,588 | INFO     | neventsw: 0
[2024-06-18 13:10:05] 2024-06-18 17:09:43,588 | INFO     | pid: 42704
[2024-06-18 13:10:05] 2024-06-18 17:09:43,588 | INFO     | pgrp: 42704
[2024-06-18 13:10:05] 2024-06-18 17:09:43,588 | INFO     | corecount: 8
[2024-06-18 13:10:05] 2024-06-18 17:09:43,588 | INFO     | event service: False
[2024-06-18 13:10:05] 2024-06-18 17:09:43,588 | INFO     | sizes: {0: 2377570, 1: 2379106, 2: 2379106, 12: 2379134, 23: 2379162, 34: 2379190, 41: 2379552, 44: 2379580, 26839: 2415387, 26844: 2424347, 26846: 2424403, 26907:
[2024-06-18 13:10:05] 2024-06-18 17:09:43,591 | INFO     | --------------------------------------------------
[2024-06-18 13:10:05] 2024-06-18 17:09:43,591 | INFO     | 
[2024-06-18 13:10:05] 2024-06-18 17:09:43,591 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2024-06-18 13:10:05] 2024-06-18 17:09:43,949 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-18 13:10:05] 2024-06-18 17:09:43,951 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-18 13:10:05] 2024-06-18 17:09:43,952 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-18 13:10:05] 2024-06-18 17:09:43,952 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-18 13:10:05] 2024-06-18 17:09:43,952 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-18 13:10:05] 2024-06-18 17:09:43,952 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-18 13:10:05] 2024-06-18 17:09:43,952 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-18 13:10:05] 2024-06-18 17:09:43,952 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-18 13:10:05] 2024-06-18 17:09:43,952 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-18 13:10:05] 2024-06-18 17:09:43,952 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-18 13:10:05] 2024-06-18 17:09:43,952 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-18 13:10:05] 2024-06-18 17:09:43,952 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-18 13:10:05] 2024-06-18 17:09:43,952 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-18 13:10:05] 2024-06-18 17:09:43,952 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-18 13:10:05] 2024-06-18 17:09:43,952 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-18 13:10:05] 2024-06-18 17:09:43,952 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-18 13:10:05] 2024-06-18 17:09:43,952 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-18 13:10:05] 2024-06-18 17:09:43,953 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-18 13:10:05] 2024-06-18 17:09:43,953 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-18 13:10:05] 2024-06-18 17:09:43,953 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-18 13:10:05] 2024-06-18 17:09:43,953 | INFO     | job 6235500665 has completed (purged errors)
[2024-06-18 13:10:05] 2024-06-18 17:09:43,953 | INFO     | overall cleanup function is called
[2024-06-18 13:10:05] 2024-06-18 17:09:44,965 | INFO     | --- collectZombieJob: --- 10, [42704]
[2024-06-18 13:10:05] 2024-06-18 17:09:44,965 | INFO     | zombie collector waiting for pid 42704
[2024-06-18 13:10:05] 2024-06-18 17:09:44,965 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-18 13:10:05] 2024-06-18 17:09:45,971 | INFO     | collected zombie processes
[2024-06-18 13:10:05] 2024-06-18 17:09:45,971 | INFO     | will now attempt to kill all subprocesses of pid=42704
[2024-06-18 13:10:05] 2024-06-18 17:09:47,213 | INFO     | process IDs to be killed: [42704] (in reverse order)
[2024-06-18 13:10:05] 2024-06-18 17:09:48,200 | WARNING  | found no corresponding commands to process id(s)
[2024-06-18 13:10:05] 2024-06-18 17:09:48,203 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-18 13:10:05] 2024-06-18 17:09:48,233 | INFO     | did not find any defunct processes belonging to 42704
[2024-06-18 13:10:05] 2024-06-18 17:09:48,263 | INFO     | did not find any defunct processes belonging to 42704
[2024-06-18 13:10:05] 2024-06-18 17:09:48,263 | INFO     | ready for new job
[2024-06-18 13:10:05] 2024-06-18 17:09:48,263 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-18 13:10:05] 2024-06-18 17:09:48,266 | INFO     | *************************************
[2024-06-18 13:10:05] 2024-06-18 17:09:48,266 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-18 13:10:05] 2024-06-18 17:09:48,266 | INFO     | *************************************
[2024-06-18 13:10:05] 2024-06-18 17:09:48,266 | INFO     | 
[2024-06-18 13:10:05] 2024-06-18 17:09:48,269 | INFO     | architecture information:
[2024-06-18 13:10:05] 2024-06-18 17:09:48,274 | INFO     | executing command: cat /etc/os-release
[2024-06-18 13:10:05] 2024-06-18 17:09:48,560 | INFO     | cat /etc/os-release:
[2024-06-18 13:10:05] NAME="CentOS Linux"
[2024-06-18 13:10:05] VERSION="7 (Core)"
[2024-06-18 13:10:05] ID="centos"
[2024-06-18 13:10:05] ID_LIKE="rhel fedora"
[2024-06-18 13:10:05] VERSION_ID="7"
[2024-06-18 13:10:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-18 13:10:05] ANSI_COLOR="0;31"
[2024-06-18 13:10:05] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-18 13:10:05] HOME_URL="https://www.centos.org/"
[2024-06-18 13:10:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-18 13:10:05] 
[2024-06-18 13:10:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-18 13:10:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-18 13:10:05] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-18 13:10:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-18 13:10:05] 
[2024-06-18 13:10:05] 2024-06-18 17:09:48,561 | INFO     | *************************************
[2024-06-18 13:10:05] 2024-06-18 17:09:49,065 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2024-06-18 13:10:05] 2024-06-18 17:09:49,153 | INFO     | sufficient remaining disk space (72557264896 B)
[2024-06-18 13:10:05] 2024-06-18 17:09:49,153 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-18 13:10:05] 2024-06-18 17:09:49,163 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-18 13:10:05] 2024-06-18 17:09:49,163 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-18 13:10:05] 2024-06-18 17:09:49,164 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-18 13:10:05] 2024-06-18 17:09:49,164 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-18 13:10:05] 2024-06-18 17:09:49,164 | INFO     | found 0 job(s) in 20 queues
[2024-06-18 13:10:05] 2024-06-18 17:09:49,164 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-18 13:10:05] 2024-06-18 17:09:49,164 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-18 13:10:05] 2024-06-18 17:09:49,440 | INFO     | all data control threads have been joined
[2024-06-18 13:10:05] 2024-06-18 17:09:49,556 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-06-18 13:10:05] 2024-06-18 17:09:49,556 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-06-18 13:10:05] 2024-06-18 17:09:49,557 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-18 13:10:05] 2024-06-18 17:09:49,557 | INFO     | will abort loop
[2024-06-18 13:10:05] 2024-06-18 17:09:50,134 | INFO     | all payload control threads have been joined
[2024-06-18 13:10:05] 2024-06-18 17:09:50,171 | INFO     | [job] retrieve thread has finished
[2024-06-18 13:10:05] 2024-06-18 17:09:50,173 | INFO     | [job] queue monitor thread has finished
[2024-06-18 13:10:05] 2024-06-18 17:09:50,322 | INFO     | [payload] failed_post thread has finished
[2024-06-18 13:10:05] 2024-06-18 17:09:50,446 | INFO     | [data] control thread has finished
[2024-06-18 13:10:05] 2024-06-18 17:09:50,483 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-18 13:10:05] 2024-06-18 17:09:50,563 | INFO     | [job] job monitor thread has finished
[2024-06-18 13:10:05] 2024-06-18 17:09:50,592 | INFO     | [job] validate thread has finished
[2024-06-18 13:10:05] 2024-06-18 17:09:50,777 | INFO     | [job] create_data_payload thread has finished
[2024-06-18 13:10:05] 2024-06-18 17:09:50,780 | INFO     | all job control threads have been joined
[2024-06-18 13:10:05] 2024-06-18 17:09:50,871 | INFO     | [payload] validate_post thread has finished
[2024-06-18 13:10:05] 2024-06-18 17:09:51,140 | INFO     | [payload] control thread has finished
[2024-06-18 13:10:05] 2024-06-18 17:09:51,169 | INFO     | [data] copytool_out thread has finished
[2024-06-18 13:10:05] 2024-06-18 17:09:51,290 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-18 13:10:05] 2024-06-18 17:09:51,623 | INFO     | [payload] validate_pre thread has finished
[2024-06-18 13:10:05] 2024-06-18 17:09:51,623 | INFO     | [payload] execute_payloads thread has finished
[2024-06-18 13:10:05] 2024-06-18 17:09:51,660 | INFO     | [data] copytool_in thread has finished
[2024-06-18 13:10:05] 2024-06-18 17:09:51,786 | INFO     | [job] control thread has finished
[2024-06-18 13:10:05] 2024-06-18 17:09:55,299 | INFO     | [data] queue_monitor thread has finished
[2024-06-18 13:10:05] 2024-06-18 17:09:55,965 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140645509412672)>', '<ExcThread(monitor, started 140644936836864)>']
[2024-06-18 13:10:05] 2024-06-18 17:09:56,210 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-18 13:10:05] 2024-06-18 17:09:56,210 | INFO     | [monitor] control thread has ended
[2024-06-18 13:10:05] 2024-06-18 17:10:00,998 | INFO     | all workflow threads have been joined
[2024-06-18 13:10:05] 2024-06-18 17:10:00,998 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-18 13:10:05] 2024-06-18 17:10:00,998 | INFO     | traces error code: 0
[2024-06-18 13:10:05] 2024-06-18 17:10:00,998 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-18 13:10:05] 2024-06-18 17:10:02,052 [wrapper] ==== pilot stdout END ====
[2024-06-18 13:10:05] 2024-06-18 17:10:02,081 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-18 13:10:05] 2024-06-18 17:10:02,144 [wrapper] pilotpid: 48832
[2024-06-18 13:10:05] 2024-06-18 17:10:02,168 [wrapper] Pilot exit status: 0
[2024-06-18 13:10:05] 2024-06-18 17:10:02,408 [wrapper] pandaids: 6235500665
[2024-06-18 13:10:05] 2024-06-18 17:10:03,437 [wrapper] cleanup supervisor_pilot 55581 48833
[2024-06-18 13:10:05] 2024-06-18 17:10:03,467 [wrapper] Test setup, not cleaning
[2024-06-18 13:10:05] 2024-06-18 17:10:03,508 [wrapper] ==== wrapper stdout END ====
[2024-06-18 13:10:05] 2024-06-18 17:10:03,546 [wrapper] ==== wrapper stderr END ====
[2024-06-18 13:10:05] 2024-06-18 17:10:03,618 [wrapper] apfmon messages muted
[2024-06-18 13:10:05]  *** Error codes and diagnostics ***
[2024-06-18 13:10:05]     "exeErrorCode": 0,
[2024-06-18 13:10:05]     "exeErrorDiag": "",
[2024-06-18 13:10:05]     "pilotErrorCode": 0,
[2024-06-18 13:10:05]     "pilotErrorDiag": "",
[2024-06-18 13:10:05]  *** Listing of results directory ***
[2024-06-18 13:10:05] total 876596
[2024-06-18 13:10:05] -rw-r--r-- 1 boincer umatlas    469766 Jun 17 22:43 pilot3.tar.gz
[2024-06-18 13:10:05] -rw-r--r-- 1 boincer umatlas      5654 Jun 17 22:48 queuedata.json
[2024-06-18 13:10:05] -rwx------ 1 boincer umatlas     32308 Jun 17 22:50 runpilot2-wrapper.sh
[2024-06-18 13:10:05] -rw-r--r-- 1 boincer umatlas       100 Jun 18 05:38 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-18 13:10:05] -rwxr-xr-x 1 boincer umatlas      7986 Jun 18 05:38 run_atlas
[2024-06-18 13:10:05] -rw-r--r-- 1 boincer umatlas       105 Jun 18 05:38 job.xml
[2024-06-18 13:10:05] -rw-r--r-- 2 boincer umatlas 543423817 Jun 18 05:38 EVNT.38776210._000387.pool.root.1
[2024-06-18 13:10:05] -rw-r--r-- 2 boincer umatlas     17537 Jun 18 05:38 start_atlas.sh
[2024-06-18 13:10:05] drwxrwx--x 2 boincer umatlas      4096 Jun 18 05:38 shared
[2024-06-18 13:10:05] -rw-r--r-- 2 boincer umatlas    482533 Jun 18 05:38 input.tar.gz
[2024-06-18 13:10:05] -rw-r--r-- 1 boincer umatlas         0 Jun 18 05:38 boinc_lockfile
[2024-06-18 13:10:05] -rw-r--r-- 1 boincer umatlas      2645 Jun 18 05:38 pandaJob.out
[2024-06-18 13:10:05] -rw------- 1 boincer umatlas       467 Jun 18 05:38 setup.sh.local
[2024-06-18 13:10:05] -rw------- 1 boincer umatlas   1020167 Jun 18 05:39 agis_schedconf.cvmfs.json
[2024-06-18 13:10:05] -rw------- 1 boincer umatlas   1316805 Jun 18 05:39 cric_ddmendpoints.json
[2024-06-18 13:10:05] drwx------ 4 boincer umatlas      4096 Jun 18 05:39 pilot3
[2024-06-18 13:10:05] -rw-r--r-- 1 boincer umatlas      6340 Jun 18 13:00 init_data.xml
[2024-06-18 13:10:05] -rw------- 1 boincer umatlas 344553580 Jun 18 13:06 HITS.38921013._045031.pool.root.1
[2024-06-18 13:10:05] -rw-r--r-- 1 boincer umatlas       533 Jun 18 13:07 boinc_task_state.xml
[2024-06-18 13:10:05] -rw------- 1 boincer umatlas      1079 Jun 18 13:08 memory_monitor_summary.json
[2024-06-18 13:10:05] -rw------- 1 boincer umatlas         0 Jun 18 13:08 agis_ddmendpoints.agis.ALL.json
[2024-06-18 13:10:05] -rw------- 1 boincer umatlas    521503 Jun 18 13:08 log.38921013._045031.job.log.tgz.1
[2024-06-18 13:10:05] -rw------- 1 boincer umatlas      7752 Jun 18 13:09 heartbeat.json
[2024-06-18 13:10:05] -rw------- 1 boincer umatlas        95 Jun 18 13:09 pilot_heartbeat.json
[2024-06-18 13:10:05] -rw-r--r-- 1 boincer umatlas      8192 Jun 18 13:09 boinc_mmap_file
[2024-06-18 13:10:05] -rw-r--r-- 1 boincer umatlas        29 Jun 18 13:09 wrapper_checkpoint.txt
[2024-06-18 13:10:05] -rw------- 1 boincer umatlas      4520 Jun 18 13:10 pilotlog.txt
[2024-06-18 13:10:05] -rw------- 1 boincer umatlas   2542410 Jun 18 13:10 log.38921013._045031.job.log.1
[2024-06-18 13:10:05] -rw------- 1 boincer umatlas       357 Jun 18 13:10 output.list
[2024-06-18 13:10:05] -rw-r--r-- 1 boincer umatlas       620 Jun 18 13:10 runtime_log
[2024-06-18 13:10:05] -rw------- 1 boincer umatlas   3082240 Jun 18 13:10 result.tar.gz
[2024-06-18 13:10:05] -rw------- 1 boincer umatlas       654 Jun 18 13:10 T7MODmh6dd5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmjmiKDmdN1NPo.diag
[2024-06-18 13:10:05] -rw-r--r-- 1 boincer umatlas     11405 Jun 18 13:10 runtime_log.err
[2024-06-18 13:10:05] -rw-r--r-- 1 boincer umatlas     21719 Jun 18 13:10 stderr.txt
[2024-06-18 13:10:05] HITS file was successfully produced:
[2024-06-18 13:10:05] -rw------- 1 boincer umatlas 344553580 Jun 18 13:06 shared/HITS.pool.root.1
[2024-06-18 13:10:05]  *** Contents of shared directory: ***
[2024-06-18 13:10:05] total 870680
[2024-06-18 13:10:05] -rw-r--r-- 2 boincer umatlas 543423817 Jun 18 05:38 ATLAS.root_0
[2024-06-18 13:10:05] -rw-r--r-- 2 boincer umatlas     17537 Jun 18 05:38 start_atlas.sh
[2024-06-18 13:10:05] -rw-r--r-- 2 boincer umatlas    482533 Jun 18 05:38 input.tar.gz
[2024-06-18 13:10:05] -rw------- 1 boincer umatlas 344553580 Jun 18 13:06 HITS.pool.root.1
[2024-06-18 13:10:05] -rw------- 1 boincer umatlas   3082240 Jun 18 13:10 result.tar.gz
13:10:07 (65124): run_atlas exited; CPU time 131506.811966
13:10:07 (65124): called boinc_finish(0)

</stderr_txt>
]]>

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