Stderr output

<core_client_version>7.16.5</core_client_version>
<![CDATA[
<stderr_txt>
2024-06-23 21:54:28 (10544): Detected: vboxwrapper 26206
2024-06-23 21:54:28 (10544): Detected: BOINC client v7.16.5
2024-06-23 21:54:28 (10544): Detected: VirtualBox VboxManage Interface (Version: 5.1.22)
2024-06-23 21:54:29 (10544): Successfully copied 'init_data.xml' to the shared directory.
2024-06-23 21:54:29 (10544): Create VM. (boinc_1052d1892490f891, slot#2)
2024-06-23 21:54:30 (10544): Setting Memory Size for VM. (4400MB)
2024-06-23 21:54:30 (10544): Setting CPU Count for VM. (6)
2024-06-23 21:54:30 (10544): Setting Chipset Options for VM.
2024-06-23 21:54:30 (10544): Setting Graphics Controller Options for VM.
2024-06-23 21:54:31 (10544): Setting Boot Options for VM.
2024-06-23 21:54:31 (10544): Setting Network Configuration for NAT.
2024-06-23 21:54:31 (10544): Enabling VM Network Access.
2024-06-23 21:54:32 (10544): Disabling USB Support for VM.
2024-06-23 21:54:32 (10544): Disabling COM Port Support for VM.
2024-06-23 21:54:32 (10544): Disabling LPT Port Support for VM.
2024-06-23 21:54:32 (10544): Disabling Audio Support for VM.
2024-06-23 21:54:33 (10544): Disabling Clipboard Support for VM.
2024-06-23 21:54:33 (10544): Disabling Drag and Drop Support for VM.
2024-06-23 21:54:33 (10544): Adding storage controller(s) to VM.
2024-06-23 21:54:33 (10544): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-06-23 21:54:34 (10544): Adding VirtualBox Guest Additions to VM.
2024-06-23 21:54:34 (10544): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-06-23 21:54:34 (10544): forwarding host port 53222 to guest port 80
2024-06-23 21:54:35 (10544): Enabling remote desktop for VM.
2024-06-23 21:54:35 (10544): Enabling shared directory for VM.
2024-06-23 21:54:36 (10544): Starting VM using VBoxManage interface. (boinc_1052d1892490f891, slot#2)
2024-06-23 21:54:40 (10544): Successfully started VM. (PID = '11668')
2024-06-23 21:54:40 (10544): Reporting VM Process ID to BOINC.
2024-06-23 21:54:40 (10544): Guest Log: BIOS: VirtualBox 5.1.22
2024-06-23 21:54:40 (10544): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-06-23 21:54:40 (10544): VM state change detected. (old = 'poweredoff', new = 'running')
2024-06-23 21:54:40 (10544): Detected: Web Application Enabled (http://localhost:53222)
2024-06-23 21:54:40 (10544): Detected: Remote Desktop Enabled (localhost:53223)
2024-06-23 21:54:40 (10544): Preference change detected
2024-06-23 21:54:40 (10544): Setting CPU throttle for VM. (100%)
2024-06-23 21:54:40 (10544): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2024-06-23 21:54:42 (10544): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-06-23 21:54:42 (10544): Guest Log: BIOS: Booting from Hard Disk...
2024-06-23 21:54:45 (10544): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-06-23 21:54:45 (10544): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-06-23 21:54:45 (10544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-06-23 21:54:45 (10544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-06-23 21:54:45 (10544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-06-23 21:54:45 (10544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-06-23 21:54:45 (10544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-06-23 21:54:45 (10544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-06-23 21:54:45 (10544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-06-23 21:54:45 (10544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-06-23 21:54:45 (10544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-06-23 21:54:45 (10544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-06-23 21:54:45 (10544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-06-23 21:54:45 (10544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-06-23 21:54:45 (10544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-06-23 21:54:45 (10544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-06-23 21:54:45 (10544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-06-23 21:54:45 (10544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-06-23 21:54:45 (10544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-06-23 21:54:45 (10544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-06-23 21:54:45 (10544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-06-23 21:54:45 (10544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-06-23 21:54:45 (10544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-06-23 21:54:45 (10544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-06-23 21:54:45 (10544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-06-23 21:54:45 (10544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-06-23 21:54:45 (10544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-06-23 21:54:45 (10544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-06-23 21:54:45 (10544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-06-23 21:54:45 (10544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-06-23 21:54:45 (10544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-06-23 21:54:45 (10544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-06-23 21:54:51 (10544): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-06-23 21:54:51 (10544): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-06-23 21:55:37 (10544): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-06-23 21:55:37 (10544): Guest Log: 00:00:00.000166 main     Log opened 2024-06-23T21:55:34.892525000Z
2024-06-23 21:55:37 (10544): Guest Log: 00:00:00.000247 main     OS Product: Linux
2024-06-23 21:55:37 (10544): Guest Log: 00:00:00.000307 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-06-23 21:55:37 (10544): Guest Log: 00:00:00.000346 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-06-23 21:55:37 (10544): Guest Log: 00:00:00.000384 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-06-23 21:55:37 (10544): Guest Log: 00:00:00.000385 main     Process ID: 1350
2024-06-23 21:55:37 (10544): Guest Log: 00:00:00.000385 main     Package type: LINUX_64BITS_GENERIC
2024-06-23 21:55:37 (10544): Guest Log: 00:00:00.001440 main     5.2.32 r132073 started. Verbose level = 0
2024-06-23 21:55:37 (10544): Guest Log: 00:00:00.002085 main     Error: Service 'control' failed to initialize: VERR_INVALID_PARAMETER
2024-06-23 21:55:37 (10544): Guest Log: 00:00:00.002242 main     Session 0 is about to close ...
2024-06-23 21:55:37 (10544): Guest Log: 00:00:00.002273 main     Stopping all guest processes ...
2024-06-23 21:55:37 (10544): Guest Log: 00:00:00.002300 main     Closing all guest files ...
2024-06-23 21:55:37 (10544): Guest Log: 00:00:00.002390 main     Ended.
2024-06-23 21:55:37 (10544): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-06-23 21:55:37 (10544): Guest Log: [INFO] Mounting shared directory
2024-06-23 21:55:37 (10544): Guest Log: [INFO] Checking for init_data.xml
2024-06-23 21:55:41 (10544): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-06-23 21:55:41 (10544): Guest Log: [INFO] Detected branch: prod
2024-06-23 21:55:41 (10544): Guest Log: This is the prod version of the ATLAS job wrapper
2024-06-23 21:55:41 (10544): Guest Log: Copying input files
2024-06-23 21:55:47 (10544): Guest Log: Copied input files into RunAtlas.
2024-06-23 21:55:47 (10544): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-06-23 21:55:47 (10544): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-06-23 21:55:47 (10544): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-06-23 21:55:47 (10544): Guest Log: Further information can be found at the LHC@home message board.
2024-06-23 21:56:02 (10544): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-06-23 21:56:03 (10544): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-06-23 21:56:03 (10544): Guest Log: 2.6.3.0 1620 0 30136 134211 3 1 3117206 4096000 0 65024 0 0 n/a 0 0 http://s1sampa-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2024-06-23 21:56:06 (10544): Guest Log: copied the webapp to /var/www
2024-06-23 21:56:06 (10544): Guest Log: ATHENA_PROC_NUMBER=6
2024-06-23 21:56:06 (10544): Guest Log: ATHENA_CORE_NUMBER=6
2024-06-23 21:56:07 (10544): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-06-23 21:56:08 (10544): Guest Log:  *** Starting ATLAS job. (PandaID=6235482256 taskID=38921013) ***
2024-06-23 23:34:41 (10544): Status Report: Elapsed Time: '6000.000000'
2024-06-23 23:34:41 (10544): Status Report: CPU Time: '27564.971097'
2024-06-24 01:14:42 (10544): Status Report: Elapsed Time: '12000.000000'
2024-06-24 01:14:42 (10544): Status Report: CPU Time: '63404.313235'
2024-06-24 02:54:43 (10544): Status Report: Elapsed Time: '18000.000000'
2024-06-24 02:54:43 (10544): Status Report: CPU Time: '99363.042939'
2024-06-24 04:34:44 (10544): Status Report: Elapsed Time: '24000.000000'
2024-06-24 04:34:44 (10544): Status Report: CPU Time: '135322.568247'
2024-06-24 06:14:44 (10544): Status Report: Elapsed Time: '30000.000000'
2024-06-24 06:14:44 (10544): Status Report: CPU Time: '171287.522390'
2024-06-24 07:54:45 (10544): Status Report: Elapsed Time: '36000.000000'
2024-06-24 07:54:45 (10544): Status Report: CPU Time: '207253.443739'
2024-06-24 09:34:51 (10544): Status Report: Elapsed Time: '42000.000000'
2024-06-24 09:34:51 (10544): Status Report: CPU Time: '243190.832506'
2024-06-24 10:19:57 (10544): Guest Log:  *** Job finished ***
2024-06-24 10:19:57 (10544): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-06-24 10:19:57 (10544): Guest Log: 2024-06-24 10:19:44,826 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
2024-06-24 10:19:57 (10544): Guest Log: 2024-06-24 10:19:45,828 | INFO     | [job] queue monitor thread has finished
2024-06-24 10:19:57 (10544): Guest Log: 2024-06-24 10:19:46,451 | INFO     | [data] queue_monitor thread has finished
2024-06-24 10:19:57 (10544): Guest Log: 2024-06-24 10:19:47,633 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140599834474304)>', '<ExcThread(monitor, started 140599084697344)>']
2024-06-24 10:19:57 (10544): Guest Log: 2024-06-24 10:19:47,746 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-06-24 10:19:57 (10544): Guest Log: 2024-06-24 10:19:47,747 | INFO     | [monitor] control thread has ended
2024-06-24 10:19:57 (10544): Guest Log: 2024-06-24 10:19:52,676 | INFO     | all workflow threads have been joined
2024-06-24 10:19:57 (10544): Guest Log: 2024-06-24 10:19:52,676 | INFO     | end of generic workflow (traces error code: 0)
2024-06-24 10:19:57 (10544): Guest Log: 2024-06-24 10:19:52,677 | INFO     | traces error code: 0
2024-06-24 10:19:57 (10544): Guest Log: 2024-06-24 10:19:52,677 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-06-24 10:19:57 (10544): Guest Log: 2024-06-24 10:19:52,785 [wrapper] ==== pilot stdout END ====
2024-06-24 10:19:57 (10544): Guest Log: 2024-06-24 10:19:52,789 [wrapper] ==== wrapper stdout RESUME ====
2024-06-24 10:19:57 (10544): Guest Log: 2024-06-24 10:19:52,793 [wrapper] pilotpid: 6509
2024-06-24 10:19:57 (10544): Guest Log: 2024-06-24 10:19:52,797 [wrapper] Pilot exit status: 0
2024-06-24 10:19:57 (10544): Guest Log: 2024-06-24 10:19:54,351 [wrapper] pandaids: 6235482256
2024-06-24 10:19:57 (10544): Guest Log: 2024-06-24 10:19:54,380 [wrapper] cleanup supervisor_pilot 16306 6510
2024-06-24 10:19:57 (10544): Guest Log: 2024-06-24 10:19:54,384 [wrapper] Test setup, not cleaning
2024-06-24 10:19:57 (10544): Guest Log: 2024-06-24 10:19:54,389 [wrapper] ==== wrapper stdout END ====
2024-06-24 10:19:57 (10544): Guest Log: 2024-06-24 10:19:54,393 [wrapper] ==== wrapper stderr END ====
2024-06-24 10:19:57 (10544): Guest Log: 2024-06-24 10:19:54,402 [wrapper] apfmon messages muted
2024-06-24 10:19:57 (10544): Guest Log:  *** Error codes and diagnostics ***
2024-06-24 10:19:57 (10544): Guest Log:     "exeErrorCode": 0,
2024-06-24 10:19:57 (10544): Guest Log:     "exeErrorDiag": "",
2024-06-24 10:19:57 (10544): Guest Log:     "pilotErrorCode": 0,
2024-06-24 10:19:57 (10544): Guest Log:     "pilotErrorDiag": "",
2024-06-24 10:19:57 (10544): Guest Log:  *** Listing of results directory ***
2024-06-24 10:19:57 (10544): Guest Log: total 349488
2024-06-24 10:19:57 (10544): Guest Log: -rw-r--r--. 1 atlas atlas    469766 Jun 18 02:20 pilot3.tar.gz
2024-06-24 10:19:57 (10544): Guest Log: -rw-r--r--. 1 atlas atlas      5654 Jun 18 02:38 queuedata.json
2024-06-24 10:19:57 (10544): Guest Log: -rwx------. 1 atlas atlas     32308 Jun 18 02:39 runpilot2-wrapper.sh
2024-06-24 10:19:57 (10544): Guest Log: -rwxr-xr-x. 1 atlas atlas     10709 Jun 23 21:55 init_data.xml
2024-06-24 10:19:57 (10544): Guest Log: -rwxr-xr-x. 1 atlas atlas    482539 Jun 23 21:55 input.tar.gz
2024-06-24 10:19:57 (10544): Guest Log: -rwxr-xr-x. 1 atlas atlas     17537 Jun 23 21:55 start_atlas.sh
2024-06-24 10:19:57 (10544): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun 23 21:55 EVNT.38776210._000563.pool.root.1 -> /data/./ATLAS.root_0
2024-06-24 10:19:57 (10544): Guest Log: -rw-r--r--. 1 atlas atlas      2647 Jun 23 21:56 pandaJob.out
2024-06-24 10:19:57 (10544): Guest Log: -rw-------. 1 atlas atlas       424 Jun 23 21:56 setup.sh.local
2024-06-24 10:19:57 (10544): Guest Log: -rw-------. 1 atlas atlas   1025534 Jun 23 21:57 agis_schedconf.cvmfs.json
2024-06-24 10:19:57 (10544): Guest Log: -rw-------. 1 atlas atlas   1321363 Jun 23 21:57 cric_ddmendpoints.json
2024-06-24 10:19:57 (10544): Guest Log: drwx------. 4 atlas atlas      4096 Jun 23 21:57 pilot3
2024-06-24 10:19:57 (10544): Guest Log: -rw-------. 1 atlas atlas 344015931 Jun 24 10:18 HITS.38921013._045017.pool.root.1
2024-06-24 10:19:57 (10544): Guest Log: -rw-------. 1 atlas atlas      1029 Jun 24 10:19 memory_monitor_summary.json
2024-06-24 10:19:57 (10544): Guest Log: -rw-------. 1 atlas atlas         0 Jun 24 10:19 agis_ddmendpoints.agis.ALL.json
2024-06-24 10:19:57 (10544): Guest Log: -rw-------. 1 atlas atlas    641624 Jun 24 10:19 log.38921013._045017.job.log.tgz.1
2024-06-24 10:19:57 (10544): Guest Log: -rw-------. 1 atlas atlas        95 Jun 24 10:19 pilot_heartbeat.json
2024-06-24 10:19:57 (10544): Guest Log: -rw-------. 1 atlas atlas      7732 Jun 24 10:19 heartbeat.json
2024-06-24 10:19:57 (10544): Guest Log: -rw-------. 1 atlas atlas      4271 Jun 24 10:19 pilotlog.txt
2024-06-24 10:19:57 (10544): Guest Log: -rw-------. 1 atlas atlas   4554416 Jun 24 10:19 log.38921013._045017.job.log.1
2024-06-24 10:19:57 (10544): Guest Log: -rw-------. 1 atlas atlas       357 Jun 24 10:19 output.list
2024-06-24 10:19:57 (10544): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun 24 10:19 runtime_log
2024-06-24 10:19:57 (10544): Guest Log: -rw-------. 1 atlas atlas   5212160 Jun 24 10:19 result.tar.gz
2024-06-24 10:19:57 (10544): Guest Log: -rw-r--r--. 1 atlas atlas     10937 Jun 24 10:19 runtime_log.err
2024-06-24 10:19:57 (10544): Guest Log: -rw-------. 1 atlas atlas       652 Jun 24 10:19 09eNDmmvdd5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmDmiKDmk1sTgm.diag
2024-06-24 10:19:57 (10544): Guest Log: Looking for outputfile HITS.38921013._045017.pool.root.1
2024-06-24 10:19:57 (10544): Guest Log: HITS file was successfully produced
2024-06-24 10:19:57 (10544): Guest Log: -rw-------. 1 atlas atlas 344015931 Jun 24 10:18 /home/atlas/RunAtlas/HITS.38921013._045017.pool.root.1
2024-06-24 10:19:59 (10544): Guest Log: Successfully finished the ATLAS job!
2024-06-24 10:19:59 (10544): Guest Log: Copying the results back to the shared directory!
2024-06-24 10:19:59 (10544): Guest Log:  *** Contents of shared directory: ***
2024-06-24 10:19:59 (10544): Guest Log: total 872243
2024-06-24 10:19:59 (10544): Guest Log: -rwxrwxrwx. 1 root root 543436005 Jun 23 18:54 ATLAS.root_0
2024-06-24 10:19:59 (10544): Guest Log: -rwxrwxrwx. 1 root root 344015931 Jun 24 07:19 HITS.pool.root.1
2024-06-24 10:19:59 (10544): Guest Log: -rwxrwxrwx. 1 root root     10709 Jun 23 18:54 init_data.xml
2024-06-24 10:19:59 (10544): Guest Log: -rwxrwxrwx. 1 root root    482539 Jun 18 10:50 input.tar.gz
2024-06-24 10:19:59 (10544): Guest Log: -rwxrwxrwx. 1 root root   5212160 Jun 24 07:19 result.tar.gz
2024-06-24 10:19:59 (10544): Guest Log: -rwxrwxrwx. 1 root root     17537 Jun 18 10:50 start_atlas.sh
2024-06-24 10:19:59 (10544): Guest Log:  *** Success! Shutting down the machine. ***
2024-06-24 10:19:59 (10544): VM Completion File Detected.
2024-06-24 10:19:59 (10544): Powering off VM.
2024-06-24 10:20:00 (10544): Successfully stopped VM.
2024-06-24 10:20:00 (10544): Deregistering VM. (boinc_1052d1892490f891, slot#2)
2024-06-24 10:20:00 (10544): Removing network bandwidth throttle group from VM.
2024-06-24 10:20:00 (10544): Removing VM from VirtualBox.
10:20:07 (10544): called boinc_finish(0)

</stderr_txt>
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