Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
22:23:02 (1972610): wrapper (7.7.26015): starting
22:23:02 (1972610): wrapper: running run_atlas (--nthreads 12)
[2024-06-23 22:23:02] Arguments: --nthreads 12
[2024-06-23 22:23:02] Threads: 12
[2024-06-23 22:23:02] Checking for CVMFS
[2024-06-23 22:23:02] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-23 22:23:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-23 22:23:02] Running cvmfs_config stat atlas.cern.ch
[2024-06-23 22:23:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-23 22:23:03] 2.11.2.0 442286 539 55932 134222 1 187 3889040 4194305 851 130560 0 782994 98.463 1105800 14484 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.150.1:3128 1
[2024-06-23 22:23:03] CVMFS is ok
[2024-06-23 22:23:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-23 22:23:03] Checking for apptainer binary...
[2024-06-23 22:23:03] apptainer is not installed, using version from CVMFS
[2024-06-23 22:23:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-23 22:23:03] Trebeth
[2024-06-23 22:23:03] apptainer works
[2024-06-23 22:23:03] Set ATHENA_PROC_NUMBER=12
[2024-06-23 22:23:03] Set ATHENA_CORE_NUMBER=12
[2024-06-23 22:23:03] Starting ATLAS job with PandaID=6235321865
[2024-06-23 22:23:03] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-24 02:28:21]  *** The last 200 lines of the pilot log: ***
[2024-06-24 02:28:21] 2024-06-24 06:28:06,285 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-06-24 02:28:21] 2024-06-24 06:28:06,906 | INFO     | monitor loop #1139: job 0:6235321865 is in state 'finished'
[2024-06-24 02:28:21] 2024-06-24 06:28:06,906 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-24 02:28:21] 2024-06-24 06:28:09,409 | INFO     | monitor loop #1140: job 0:6235321865 is in state 'finished'
[2024-06-24 02:28:21] 2024-06-24 06:28:09,409 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-24 02:28:21] 2024-06-24 06:28:09,431 | INFO     | CPU arch script returned: x86-64-v3
[2024-06-24 02:28:21] 2024-06-24 06:28:09,431 | INFO     | using path: /var/lib/boinc-client/slots/6/PanDA_Pilot-6235321865/memory_monitor_summary.json (trf name=prmon)
[2024-06-24 02:28:21] 2024-06-24 06:28:09,432 | INFO     | extracted standard info from prmon json
[2024-06-24 02:28:21] 2024-06-24 06:28:09,433 | INFO     | extracted standard memory fields from prmon json
[2024-06-24 02:28:21] 2024-06-24 06:28:09,433 | WARNING  | GPU info not found in prmon json
[2024-06-24 02:28:21] 2024-06-24 06:28:09,433 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-24 02:28:21] 2024-06-24 06:28:09,433 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-24 02:28:21] 2024-06-24 06:28:09,438 | INFO     | fitting pss+swap vs Time
[2024-06-24 02:28:21] 2024-06-24 06:28:09,438 | INFO     | model: linear, x: [1719195814.0, 1719195875.0, 1719195936.0, 1719195997.0, 1719196058.0, 1719196119.0, 1719196180.0, 1719196241.0, 1719196302.0, 1719196363.0, 1719
[2024-06-24 02:28:21] 2024-06-24 06:28:09,438 | INFO     | sum of square deviations: 4340323240.0
[2024-06-24 02:28:21] 2024-06-24 06:28:09,440 | INFO     | sum of deviations: 51465238717.999985
[2024-06-24 02:28:21] 2024-06-24 06:28:09,440 | INFO     | mean x: 1719203134.0
[2024-06-24 02:28:21] 2024-06-24 06:28:09,440 | INFO     | mean y: 2762352.991701245
[2024-06-24 02:28:21] 2024-06-24 06:28:09,440 | INFO     | -- intersect: -20382631730.247986
[2024-06-24 02:28:21] 2024-06-24 06:28:09,440 | INFO     | intersect: -20382631730.247986
[2024-06-24 02:28:21] 2024-06-24 06:28:09,441 | INFO     | chi2: 3.188656881049592
[2024-06-24 02:28:21] 2024-06-24 06:28:09,441 | INFO     | model: linear, x: [1719195814.0, 1719195875.0, 1719195936.0, 1719195997.0, 1719196058.0, 1719196119.0, 1719196180.0, 1719196241.0, 1719196302.0, 1719196363.0, 1719
[2024-06-24 02:28:21] 2024-06-24 06:28:09,441 | INFO     | sum of square deviations: 4075741535.0
[2024-06-24 02:28:21] 2024-06-24 06:28:09,443 | INFO     | sum of deviations: 67110028003.49998
[2024-06-24 02:28:21] 2024-06-24 06:28:09,443 | INFO     | mean x: 1719202981.5
[2024-06-24 02:28:21] 2024-06-24 06:28:09,443 | INFO     | mean y: 2771203.4872881356
[2024-06-24 02:28:21] 2024-06-24 06:28:09,443 | INFO     | -- intersect: -28305147549.796867
[2024-06-24 02:28:21] 2024-06-24 06:28:09,443 | INFO     | intersect: -28305147549.796867
[2024-06-24 02:28:21] 2024-06-24 06:28:09,443 | INFO     | chi2: 2.489251369369423
[2024-06-24 02:28:21] 2024-06-24 06:28:09,444 | INFO     | current chi2=2.489251369369423 (change=21.934172843644113 %)
[2024-06-24 02:28:21] 2024-06-24 06:28:09,444 | INFO     | right removable region: 235
[2024-06-24 02:28:21] 2024-06-24 06:28:09,444 | INFO     | model: linear, x: [1719196119.0, 1719196180.0, 1719196241.0, 1719196302.0, 1719196363.0, 1719196424.0, 1719196485.0, 1719196546.0, 1719196607.0, 1719196668.0, 1719
[2024-06-24 02:28:21] 2024-06-24 06:28:09,444 | INFO     | sum of square deviations: 4075741535.0
[2024-06-24 02:28:21] 2024-06-24 06:28:09,446 | INFO     | sum of deviations: -11122970884.999996
[2024-06-24 02:28:21] 2024-06-24 06:28:09,446 | INFO     | mean x: 1719203286.5
[2024-06-24 02:28:21] 2024-06-24 06:28:09,446 | INFO     | mean y: 2798291.4576271186
[2024-06-24 02:28:21] 2024-06-24 06:28:09,446 | INFO     | -- intersect: 4694618893.162148
[2024-06-24 02:28:21] 2024-06-24 06:28:09,446 | INFO     | intersect: 4694618893.162148
[2024-06-24 02:28:21] 2024-06-24 06:28:09,446 | INFO     | chi2: 0.974715622417442
[2024-06-24 02:28:21] 2024-06-24 06:28:09,446 | INFO     | current chi2=0.974715622417442 (change=69.4317808789574 %)
[2024-06-24 02:28:21] 2024-06-24 06:28:09,447 | INFO     | model: linear, x: [1719196424.0, 1719196485.0, 1719196546.0, 1719196607.0, 1719196668.0, 1719196729.0, 1719196790.0, 1719196851.0, 1719196912.0, 1719196973.0, 1719
[2024-06-24 02:28:21] 2024-06-24 06:28:09,447 | INFO     | sum of square deviations: 3822136780.0
[2024-06-24 02:28:21] 2024-06-24 06:28:09,448 | INFO     | sum of deviations: -27093931531.999996
[2024-06-24 02:28:21] 2024-06-24 06:28:09,448 | INFO     | mean x: 1719203439.0
[2024-06-24 02:28:21] 2024-06-24 06:28:09,449 | INFO     | mean y: 2807895.337662338
[2024-06-24 02:28:21] 2024-06-24 06:28:09,449 | INFO     | -- intersect: 12189703066.013613
[2024-06-24 02:28:21] 2024-06-24 06:28:09,449 | INFO     | intersect: 12189703066.013613
[2024-06-24 02:28:21] 2024-06-24 06:28:09,449 | INFO     | chi2: 0.8364217280834793
[2024-06-24 02:28:21] 2024-06-24 06:28:09,449 | INFO     | current chi2=0.8364217280834793 (change=14.188127403865039 %)
[2024-06-24 02:28:21] 2024-06-24 06:28:09,449 | INFO     | left removable region: 20
[2024-06-24 02:28:21] 2024-06-24 06:28:09,450 | INFO     | model: linear, x: [1719197034.0, 1719197095.0, 1719197156.0, 1719197217.0, 1719197278.0, 1719197339.0, 1719197400.0, 1719197461.0, 1719197522.0, 1719197583.0, 1719
[2024-06-24 02:28:21] 2024-06-24 06:28:09,450 | INFO     | sum of square deviations: 3081657780.0
[2024-06-24 02:28:21] 2024-06-24 06:28:09,451 | INFO     | sum of deviations: -8223494423.999998
[2024-06-24 02:28:21] 2024-06-24 06:28:09,451 | INFO     | mean x: 1719203561.0
[2024-06-24 02:28:21] 2024-06-24 06:28:09,451 | INFO     | mean y: 2816508.693023256
[2024-06-24 02:28:21] 2024-06-24 06:28:09,451 | INFO     | -- intersect: 4590561776.632685
[2024-06-24 02:28:21] 2024-06-24 06:28:09,451 | INFO     | intersect: 4590561776.632685
[2024-06-24 02:28:21] 2024-06-24 06:28:09,452 | INFO     | chi2: 0.10737764281060594
[2024-06-24 02:28:21] 2024-06-24 06:28:09,452 | INFO     | -- intersect: 4590561776.632685
[2024-06-24 02:28:21] 2024-06-24 06:28:09,452 | INFO     | current memory leak: -2.67 B/s (using 215 data points, chi2=0.11)
[2024-06-24 02:28:21] 2024-06-24 06:28:09,453 | INFO     | ..............................
[2024-06-24 02:28:21] 2024-06-24 06:28:09,453 | INFO     | . Timing measurements:
[2024-06-24 02:28:21] 2024-06-24 06:28:09,453 | INFO     | . get job = 0 s
[2024-06-24 02:28:21] 2024-06-24 06:28:09,453 | INFO     | . initial setup = 1 s
[2024-06-24 02:28:21] 2024-06-24 06:28:09,453 | INFO     | . payload setup = 4 s
[2024-06-24 02:28:21] 2024-06-24 06:28:09,453 | INFO     | . stage-in = 0 s
[2024-06-24 02:28:21] 2024-06-24 06:28:09,453 | INFO     | . payload execution = 14666 s
[2024-06-24 02:28:21] 2024-06-24 06:28:09,453 | INFO     | . stage-out = 1 s
[2024-06-24 02:28:21] 2024-06-24 06:28:09,453 | INFO     | . log creation = 0 s
[2024-06-24 02:28:21] 2024-06-24 06:28:09,453 | INFO     | ..............................
[2024-06-24 02:28:21] 2024-06-24 06:28:09,550 | INFO     | 
[2024-06-24 02:28:21] 2024-06-24 06:28:09,550 | INFO     | job summary report
[2024-06-24 02:28:21] 2024-06-24 06:28:09,550 | INFO     | --------------------------------------------------
[2024-06-24 02:28:21] 2024-06-24 06:28:09,550 | INFO     | PanDA job id: 6235321865
[2024-06-24 02:28:21] 2024-06-24 06:28:09,550 | INFO     | task id: 38921013
[2024-06-24 02:28:21] 2024-06-24 06:28:09,550 | INFO     | errors: (none)
[2024-06-24 02:28:21] 2024-06-24 06:28:09,550 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-24 02:28:21] 2024-06-24 06:28:09,550 | INFO     | pilot state: finished 
[2024-06-24 02:28:21] 2024-06-24 06:28:09,551 | INFO     | transexitcode: 0
[2024-06-24 02:28:21] 2024-06-24 06:28:09,551 | INFO     | exeerrorcode: 0
[2024-06-24 02:28:21] 2024-06-24 06:28:09,551 | INFO     | exeerrordiag: 
[2024-06-24 02:28:21] 2024-06-24 06:28:09,551 | INFO     | exitcode: 0
[2024-06-24 02:28:21] 2024-06-24 06:28:09,551 | INFO     | exitmsg: OK
[2024-06-24 02:28:21] 2024-06-24 06:28:09,551 | INFO     | cpuconsumptiontime: 162052 s
[2024-06-24 02:28:21] 2024-06-24 06:28:09,551 | INFO     | nevents: 400
[2024-06-24 02:28:21] 2024-06-24 06:28:09,551 | INFO     | neventsw: 0
[2024-06-24 02:28:21] 2024-06-24 06:28:09,551 | INFO     | pid: 1984866
[2024-06-24 02:28:21] 2024-06-24 06:28:09,551 | INFO     | pgrp: 1984866
[2024-06-24 02:28:21] 2024-06-24 06:28:09,551 | INFO     | corecount: 12
[2024-06-24 02:28:21] 2024-06-24 06:28:09,552 | INFO     | event service: False
[2024-06-24 02:28:21] 2024-06-24 06:28:09,552 | INFO     | sizes: {0: 2387086, 1: 2387086, 4: 2387320, 11: 2387348, 14675: 2418166, 14678: 2427140, 14680: 2427324, 14684: 2427494}
[2024-06-24 02:28:21] 2024-06-24 06:28:09,552 | INFO     | --------------------------------------------------
[2024-06-24 02:28:21] 2024-06-24 06:28:09,552 | INFO     | 
[2024-06-24 02:28:21] 2024-06-24 06:28:09,552 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/6
[2024-06-24 02:28:21] 2024-06-24 06:28:09,569 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-24 02:28:21] 2024-06-24 06:28:09,569 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-24 02:28:21] 2024-06-24 06:28:09,570 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-24 02:28:21] 2024-06-24 06:28:09,570 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-24 02:28:21] 2024-06-24 06:28:09,570 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-24 02:28:21] 2024-06-24 06:28:09,570 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-24 02:28:21] 2024-06-24 06:28:09,570 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-24 02:28:21] 2024-06-24 06:28:09,570 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-24 02:28:21] 2024-06-24 06:28:09,570 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-24 02:28:21] 2024-06-24 06:28:09,570 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-24 02:28:21] 2024-06-24 06:28:09,570 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-24 02:28:21] 2024-06-24 06:28:09,570 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-24 02:28:21] 2024-06-24 06:28:09,570 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-24 02:28:21] 2024-06-24 06:28:09,571 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-24 02:28:21] 2024-06-24 06:28:09,571 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-24 02:28:21] 2024-06-24 06:28:09,571 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-24 02:28:21] 2024-06-24 06:28:09,571 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-24 02:28:21] 2024-06-24 06:28:09,571 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-24 02:28:21] 2024-06-24 06:28:09,571 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-24 02:28:21] 2024-06-24 06:28:09,571 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-24 02:28:21] 2024-06-24 06:28:09,571 | INFO     | job 6235321865 has completed (purged errors)
[2024-06-24 02:28:21] 2024-06-24 06:28:09,571 | INFO     | overall cleanup function is called
[2024-06-24 02:28:21] 2024-06-24 06:28:10,578 | INFO     | --- collectZombieJob: --- 10, [1984866]
[2024-06-24 02:28:21] 2024-06-24 06:28:10,579 | INFO     | zombie collector waiting for pid 1984866
[2024-06-24 02:28:21] 2024-06-24 06:28:10,579 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-24 02:28:21] 2024-06-24 06:28:11,582 | INFO     | collected zombie processes
[2024-06-24 02:28:21] 2024-06-24 06:28:11,583 | INFO     | will now attempt to kill all subprocesses of pid=1984866
[2024-06-24 02:28:21] 2024-06-24 06:28:11,654 | INFO     | process IDs to be killed: [1984866] (in reverse order)
[2024-06-24 02:28:21] 2024-06-24 06:28:11,751 | WARNING  | found no corresponding commands to process id(s)
[2024-06-24 02:28:21] 2024-06-24 06:28:11,751 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-24 02:28:21] 2024-06-24 06:28:11,758 | INFO     | did not find any defunct processes belonging to 1984866
[2024-06-24 02:28:21] 2024-06-24 06:28:11,763 | INFO     | did not find any defunct processes belonging to 1984866
[2024-06-24 02:28:21] 2024-06-24 06:28:11,764 | INFO     | ready for new job
[2024-06-24 02:28:21] 2024-06-24 06:28:11,764 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-24 02:28:21] 2024-06-24 06:28:11,765 | INFO     | *************************************
[2024-06-24 02:28:21] 2024-06-24 06:28:11,765 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-24 02:28:21] 2024-06-24 06:28:11,765 | INFO     | *************************************
[2024-06-24 02:28:21] 2024-06-24 06:28:11,766 | INFO     | 
[2024-06-24 02:28:21] 2024-06-24 06:28:11,786 | INFO     | architecture information:
[2024-06-24 02:28:21] 2024-06-24 06:28:11,787 | INFO     | executing command: cat /etc/os-release
[2024-06-24 02:28:21] 2024-06-24 06:28:11,796 | INFO     | cat /etc/os-release:
[2024-06-24 02:28:21] NAME="CentOS Linux"
[2024-06-24 02:28:21] VERSION="7 (Core)"
[2024-06-24 02:28:21] ID="centos"
[2024-06-24 02:28:21] ID_LIKE="rhel fedora"
[2024-06-24 02:28:21] VERSION_ID="7"
[2024-06-24 02:28:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-24 02:28:21] ANSI_COLOR="0;31"
[2024-06-24 02:28:21] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-24 02:28:21] HOME_URL="https://www.centos.org/"
[2024-06-24 02:28:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-24 02:28:21] 
[2024-06-24 02:28:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-24 02:28:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-24 02:28:21] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-24 02:28:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-24 02:28:21] 
[2024-06-24 02:28:21] 2024-06-24 06:28:11,796 | INFO     | *************************************
[2024-06-24 02:28:21] 2024-06-24 06:28:12,299 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/6
[2024-06-24 02:28:21] 2024-06-24 06:28:12,314 | INFO     | sufficient remaining disk space (391232094208 B)
[2024-06-24 02:28:21] 2024-06-24 06:28:12,315 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-24 02:28:21] 2024-06-24 06:28:12,315 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-24 02:28:21] 2024-06-24 06:28:12,315 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-24 02:28:21] 2024-06-24 06:28:12,315 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-24 02:28:21] 2024-06-24 06:28:12,406 | INFO     | found 0 job(s) in 20 queues
[2024-06-24 02:28:21] 2024-06-24 06:28:12,406 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-24 02:28:21] 2024-06-24 06:28:12,406 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-24 02:28:21] 2024-06-24 06:28:12,417 | INFO     | all payload control threads have been joined
[2024-06-24 02:28:21] 2024-06-24 06:28:12,714 | INFO     | all data control threads have been joined
[2024-06-24 02:28:21] 2024-06-24 06:28:12,914 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-24 02:28:21] 2024-06-24 06:28:12,915 | INFO     | aborting loop
[2024-06-24 02:28:21] 2024-06-24 06:28:13,319 | INFO     | [job] retrieve thread has finished
[2024-06-24 02:28:21] 2024-06-24 06:28:13,375 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-24 02:28:21] 2024-06-24 06:28:13,418 | INFO     | [payload] control thread has finished
[2024-06-24 02:28:21] 2024-06-24 06:28:13,521 | INFO     | all job control threads have been joined
[2024-06-24 02:28:21] 2024-06-24 06:28:13,596 | INFO     | [payload] execute_payloads thread has finished
[2024-06-24 02:28:21] 2024-06-24 06:28:13,606 | INFO     | [job] validate thread has finished
[2024-06-24 02:28:21] 2024-06-24 06:28:13,634 | INFO     | [job] create_data_payload thread has finished
[2024-06-24 02:28:21] 2024-06-24 06:28:13,718 | INFO     | [data] control thread has finished
[2024-06-24 02:28:21] 2024-06-24 06:28:13,851 | INFO     | [payload] failed_post thread has finished
[2024-06-24 02:28:21] 2024-06-24 06:28:13,918 | INFO     | [job] job monitor thread has finished
[2024-06-24 02:28:21] 2024-06-24 06:28:14,014 | INFO     | [data] copytool_in thread has finished
[2024-06-24 02:28:21] 2024-06-24 06:28:14,318 | INFO     | [data] copytool_out thread has finished
[2024-06-24 02:28:21] 2024-06-24 06:28:14,447 | INFO     | [payload] validate_post thread has finished
[2024-06-24 02:28:21] 2024-06-24 06:28:14,522 | INFO     | [job] control thread has finished
[2024-06-24 02:28:21] 2024-06-24 06:28:14,558 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-24 02:28:21] 2024-06-24 06:28:14,650 | INFO     | [payload] validate_pre thread has finished
[2024-06-24 02:28:21] 2024-06-24 06:28:15,562 | INFO     | [job] queue monitor thread has finished
[2024-06-24 02:28:21] 2024-06-24 06:28:16,318 | INFO     | [data] queue_monitor thread has finished
[2024-06-24 02:28:21] 2024-06-24 06:28:16,414 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140437934094144)>', '<ExcThread(monitor, started 140437352335104)>']
[2024-06-24 02:28:21] 2024-06-24 06:28:16,423 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-24 02:28:21] 2024-06-24 06:28:16,424 | INFO     | [monitor] control thread has ended
[2024-06-24 02:28:21] 2024-06-24 06:28:21,430 | INFO     | all workflow threads have been joined
[2024-06-24 02:28:21] 2024-06-24 06:28:21,431 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-24 02:28:21] 2024-06-24 06:28:21,431 | INFO     | traces error code: 0
[2024-06-24 02:28:21] 2024-06-24 06:28:21,431 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-24 02:28:21] 2024-06-24 06:28:21,533 [wrapper] ==== pilot stdout END ====
[2024-06-24 02:28:21] 2024-06-24 06:28:21,535 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-24 02:28:21] 2024-06-24 06:28:21,537 [wrapper] pilotpid: 1977304
[2024-06-24 02:28:21] 2024-06-24 06:28:21,538 [wrapper] Pilot exit status: 0
[2024-06-24 02:28:21] 2024-06-24 06:28:21,546 [wrapper] pandaids: 6235321865
[2024-06-24 02:28:21] 2024-06-24 06:28:21,598 [wrapper] cleanup supervisor_pilot 2629229 1977305
[2024-06-24 02:28:21] 2024-06-24 06:28:21,601 [wrapper] Test setup, not cleaning
[2024-06-24 02:28:21] 2024-06-24 06:28:21,602 [wrapper] ==== wrapper stdout END ====
[2024-06-24 02:28:21] 2024-06-24 06:28:21,604 [wrapper] ==== wrapper stderr END ====
[2024-06-24 02:28:21] 2024-06-24 06:28:21,608 [wrapper] apfmon messages muted
[2024-06-24 02:28:21]  *** Error codes and diagnostics ***
[2024-06-24 02:28:21]     "exeErrorCode": 0,
[2024-06-24 02:28:21]     "exeErrorDiag": "",
[2024-06-24 02:28:21]     "pilotErrorCode": 0,
[2024-06-24 02:28:21]     "pilotErrorDiag": "",
[2024-06-24 02:28:21]  *** Listing of results directory ***
[2024-06-24 02:28:21] total 877588
[2024-06-24 02:28:21] -rw-r--r-- 1 boinc boinc    469766 Jun 17 21:25 pilot3.tar.gz
[2024-06-24 02:28:21] -rwx------ 1 boinc boinc     32308 Jun 17 21:37 runpilot2-wrapper.sh
[2024-06-24 02:28:21] -rw-r--r-- 1 boinc boinc      5654 Jun 17 21:37 queuedata.json
[2024-06-24 02:28:21] -rw-r--r-- 1 boinc boinc       100 Jun 23 22:23 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-24 02:28:21] -rwxr-xr-x 1 boinc boinc      7986 Jun 23 22:23 run_atlas
[2024-06-24 02:28:21] -rw-r--r-- 1 boinc boinc       105 Jun 23 22:23 job.xml
[2024-06-24 02:28:21] -rw-r--r-- 1 boinc boinc      7598 Jun 23 22:23 init_data.xml
[2024-06-24 02:28:21] -rw-r--r-- 2 boinc boinc 541591629 Jun 23 22:23 EVNT.38776210._000299.pool.root.1
[2024-06-24 02:28:21] -rw-r--r-- 2 boinc boinc     17537 Jun 23 22:23 start_atlas.sh
[2024-06-24 02:28:21] drwxrwx--x 2 boinc boinc      4096 Jun 23 22:23 shared
[2024-06-24 02:28:21] -rw-r--r-- 2 boinc boinc    482522 Jun 23 22:23 input.tar.gz
[2024-06-24 02:28:21] -rw-r--r-- 1 boinc boinc         0 Jun 23 22:23 boinc_lockfile
[2024-06-24 02:28:21] -rw-r--r-- 1 boinc boinc      2645 Jun 23 22:23 pandaJob.out
[2024-06-24 02:28:21] -rw------- 1 boinc boinc       460 Jun 23 22:23 setup.sh.local
[2024-06-24 02:28:21] -rw------- 1 boinc boinc   1024662 Jun 23 22:23 agis_schedconf.cvmfs.json
[2024-06-24 02:28:21] -rw------- 1 boinc boinc   1321363 Jun 23 22:23 cric_ddmendpoints.json
[2024-06-24 02:28:21] drwx------ 4 boinc boinc      4096 Jun 23 22:23 pilot3
[2024-06-24 02:28:21] -rw------- 1 boinc boinc 349600774 Jun 24 02:27 HITS.38921013._044803.pool.root.1
[2024-06-24 02:28:21] -rw-r--r-- 1 boinc boinc       532 Jun 24 02:27 boinc_task_state.xml
[2024-06-24 02:28:21] -rw------- 1 boinc boinc        95 Jun 24 02:27 pilot_heartbeat.json
[2024-06-24 02:28:21] -rw------- 1 boinc boinc      1030 Jun 24 02:27 memory_monitor_summary.json
[2024-06-24 02:28:21] -rw------- 1 boinc boinc         0 Jun 24 02:28 agis_ddmendpoints.agis.ALL.json
[2024-06-24 02:28:21] -rw------- 1 boinc boinc    479518 Jun 24 02:28 log.38921013._044803.job.log.tgz.1
[2024-06-24 02:28:21] -rw------- 1 boinc boinc      7695 Jun 24 02:28 heartbeat.json
[2024-06-24 02:28:21] -rw-r--r-- 1 boinc boinc      8192 Jun 24 02:28 boinc_mmap_file
[2024-06-24 02:28:21] -rw-r--r-- 1 boinc boinc        29 Jun 24 02:28 wrapper_checkpoint.txt
[2024-06-24 02:28:21] -rw------- 1 boinc boinc      4219 Jun 24 02:28 pilotlog.txt
[2024-06-24 02:28:21] -rw------- 1 boinc boinc   1480886 Jun 24 02:28 log.38921013._044803.job.log.1
[2024-06-24 02:28:21] -rw------- 1 boinc boinc       357 Jun 24 02:28 output.list
[2024-06-24 02:28:21] -rw-r--r-- 1 boinc boinc       620 Jun 24 02:28 runtime_log
[2024-06-24 02:28:21] -rw------- 1 boinc boinc   1976320 Jun 24 02:28 result.tar.gz
[2024-06-24 02:28:21] -rw------- 1 boinc boinc       645 Jun 24 02:28 vmAODmaxcd5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmVyVKDmPhkNIm.diag
[2024-06-24 02:28:21] -rw-r--r-- 1 boinc boinc     11460 Jun 24 02:28 runtime_log.err
[2024-06-24 02:28:21] -rw-r--r-- 1 boinc boinc     21478 Jun 24 02:28 stderr.txt
[2024-06-24 02:28:21] HITS file was successfully produced:
[2024-06-24 02:28:21] -rw------- 1 boinc boinc 349600774 Jun 24 02:27 shared/HITS.pool.root.1
[2024-06-24 02:28:21]  *** Contents of shared directory: ***
[2024-06-24 02:28:21] total 872740
[2024-06-24 02:28:21] -rw-r--r-- 2 boinc boinc 541591629 Jun 23 22:23 ATLAS.root_0
[2024-06-24 02:28:21] -rw-r--r-- 2 boinc boinc     17537 Jun 23 22:23 start_atlas.sh
[2024-06-24 02:28:21] -rw-r--r-- 2 boinc boinc    482522 Jun 23 22:23 input.tar.gz
[2024-06-24 02:28:21] -rw------- 1 boinc boinc 349600774 Jun 24 02:27 HITS.pool.root.1
[2024-06-24 02:28:21] -rw------- 1 boinc boinc   1976320 Jun 24 02:28 result.tar.gz
02:28:23 (1972610): run_atlas exited; CPU time 161697.350396
02:28:23 (1972610): called boinc_finish(0)

</stderr_txt>
]]>

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