Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
22:19:46 (1945336): wrapper (7.7.26015): starting
22:19:46 (1945336): wrapper: running run_atlas (--nthreads 12)
[2024-06-23 22:19:46] Arguments: --nthreads 12
[2024-06-23 22:19:46] Threads: 12
[2024-06-23 22:19:46] Checking for CVMFS
[2024-06-23 22:19:46] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-23 22:19:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-23 22:19:46] Running cvmfs_config stat atlas.cern.ch
[2024-06-23 22:19:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-23 22:19:47] 2.11.2.0 442286 536 55948 134222 0 55 3888039 4194304 915 130560 0 731077 98.354 1105729 14500 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.150.1:3128 1
[2024-06-23 22:19:47] CVMFS is ok
[2024-06-23 22:19:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-23 22:19:47] Checking for apptainer binary...
[2024-06-23 22:19:47] apptainer is not installed, using version from CVMFS
[2024-06-23 22:19:47] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-23 22:19:47] Trebeth
[2024-06-23 22:19:47] apptainer works
[2024-06-23 22:19:47] Set ATHENA_PROC_NUMBER=12
[2024-06-23 22:19:47] Set ATHENA_CORE_NUMBER=12
[2024-06-23 22:19:47] Starting ATLAS job with PandaID=6235133730
[2024-06-23 22:19:47] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-24 01:47:21]  *** The last 200 lines of the pilot log: ***
[2024-06-24 01:47:21] 2024-06-24 05:46:59,522 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-24 01:47:21] 2024-06-24 05:46:59,522 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-24 01:47:21] 2024-06-24 05:46:59,525 | INFO     | fitting pss+swap vs Time
[2024-06-24 01:47:21] 2024-06-24 05:46:59,526 | INFO     | model: linear, x: [1719195618.0, 1719195679.0, 1719195740.0, 1719195801.0, 1719195862.0, 1719195923.0, 1719195984.0, 1719196045.0, 1719196106.0, 1719196167.0, 1719
[2024-06-24 01:47:21] 2024-06-24 05:46:59,526 | INFO     | sum of square deviations: 2593916542.0
[2024-06-24 01:47:21] 2024-06-24 05:46:59,527 | INFO     | sum of deviations: 38961392533.00001
[2024-06-24 01:47:21] 2024-06-24 05:46:59,527 | INFO     | mean x: 1719201779.0
[2024-06-24 01:47:21] 2024-06-24 05:46:59,527 | INFO     | mean y: 2736718.906403941
[2024-06-24 01:47:21] 2024-06-24 05:46:59,527 | INFO     | -- intersect: -25820181740.684856
[2024-06-24 01:47:21] 2024-06-24 05:46:59,527 | INFO     | intersect: -25820181740.684856
[2024-06-24 01:47:21] 2024-06-24 05:46:59,528 | INFO     | chi2: 3.759302652933534
[2024-06-24 01:47:21] 2024-06-24 05:46:59,528 | INFO     | model: linear, x: [1719195618.0, 1719195679.0, 1719195740.0, 1719195801.0, 1719195862.0, 1719195923.0, 1719195984.0, 1719196045.0, 1719196106.0, 1719196167.0, 1719
[2024-06-24 01:47:21] 2024-06-24 05:46:59,528 | INFO     | sum of square deviations: 2406926989.5
[2024-06-24 01:47:21] 2024-06-24 05:46:59,529 | INFO     | sum of deviations: 52001803624.0
[2024-06-24 01:47:21] 2024-06-24 05:46:59,529 | INFO     | mean x: 1719201626.5
[2024-06-24 01:47:21] 2024-06-24 05:46:59,529 | INFO     | mean y: 2747121.0606060605
[2024-06-24 01:47:21] 2024-06-24 05:46:59,529 | INFO     | -- intersect: -37140708314.571915
[2024-06-24 01:47:21] 2024-06-24 05:46:59,530 | INFO     | intersect: -37140708314.571915
[2024-06-24 01:47:21] 2024-06-24 05:46:59,530 | INFO     | chi2: 3.0740425553151485
[2024-06-24 01:47:21] 2024-06-24 05:46:59,530 | INFO     | current chi2=3.0740425553151485 (change=18.22838331688058 %)
[2024-06-24 01:47:21] 2024-06-24 05:46:59,530 | INFO     | right removable region: 197
[2024-06-24 01:47:21] 2024-06-24 05:46:59,530 | INFO     | model: linear, x: [1719195923.0, 1719195984.0, 1719196045.0, 1719196106.0, 1719196167.0, 1719196228.0, 1719196289.0, 1719196350.0, 1719196411.0, 1719196472.0, 1719
[2024-06-24 01:47:21] 2024-06-24 05:46:59,530 | INFO     | sum of square deviations: 2406926989.5
[2024-06-24 01:47:21] 2024-06-24 05:46:59,531 | INFO     | sum of deviations: -15531154429.000002
[2024-06-24 01:47:21] 2024-06-24 05:46:59,532 | INFO     | mean x: 1719201931.5
[2024-06-24 01:47:21] 2024-06-24 05:46:59,532 | INFO     | mean y: 2781040.4646464647
[2024-06-24 01:47:21] 2024-06-24 05:46:59,532 | INFO     | -- intersect: 11096258661.199759
[2024-06-24 01:47:21] 2024-06-24 05:46:59,532 | INFO     | intersect: 11096258661.199759
[2024-06-24 01:47:21] 2024-06-24 05:46:59,532 | INFO     | chi2: 1.3712284162603696
[2024-06-24 01:47:21] 2024-06-24 05:46:59,532 | INFO     | current chi2=1.3712284162603696 (change=63.52439420671955 %)
[2024-06-24 01:47:21] 2024-06-24 05:46:59,533 | INFO     | model: linear, x: [1719196228.0, 1719196289.0, 1719196350.0, 1719196411.0, 1719196472.0, 1719196533.0, 1719196594.0, 1719196655.0, 1719196716.0, 1719196777.0, 1719
[2024-06-24 01:47:21] 2024-06-24 05:46:59,533 | INFO     | sum of square deviations: 2229146912.0
[2024-06-24 01:47:21] 2024-06-24 05:46:59,534 | INFO     | sum of deviations: -38180860079.0
[2024-06-24 01:47:21] 2024-06-24 05:46:59,534 | INFO     | mean x: 1719202084.0
[2024-06-24 01:47:21] 2024-06-24 05:46:59,534 | INFO     | mean y: 2800331.2590673575
[2024-06-24 01:47:21] 2024-06-24 05:46:59,534 | INFO     | -- intersect: 29449318128.43564
[2024-06-24 01:47:21] 2024-06-24 05:46:59,534 | INFO     | intersect: 29449318128.43564
[2024-06-24 01:47:21] 2024-06-24 05:46:59,534 | INFO     | chi2: 0.8359692571676318
[2024-06-24 01:47:21] 2024-06-24 05:46:59,534 | INFO     | current chi2=0.8359692571676318 (change=39.035010706130414 %)
[2024-06-24 01:47:21] 2024-06-24 05:46:59,535 | INFO     | model: linear, x: [1719196533.0, 1719196594.0, 1719196655.0, 1719196716.0, 1719196777.0, 1719196838.0, 1719196899.0, 1719196960.0, 1719197021.0, 1719197082.0, 1719
[2024-06-24 01:47:21] 2024-06-24 05:46:59,535 | INFO     | sum of square deviations: 2060343747.0
[2024-06-24 01:47:21] 2024-06-24 05:46:59,536 | INFO     | sum of deviations: -40320145664.5
[2024-06-24 01:47:21] 2024-06-24 05:46:59,536 | INFO     | mean x: 1719202236.5
[2024-06-24 01:47:21] 2024-06-24 05:46:59,536 | INFO     | mean y: 2802203.3670212766
[2024-06-24 01:47:21] 2024-06-24 05:46:59,536 | INFO     | -- intersect: 33646937898.367714
[2024-06-24 01:47:21] 2024-06-24 05:46:59,536 | INFO     | intersect: 33646937898.367714
[2024-06-24 01:47:21] 2024-06-24 05:46:59,536 | INFO     | chi2: 0.7998865184124826
[2024-06-24 01:47:21] 2024-06-24 05:46:59,537 | INFO     | current chi2=0.7998865184124826 (change=4.316275801505195 %)
[2024-06-24 01:47:21] 2024-06-24 05:46:59,537 | INFO     | left removable region: 30
[2024-06-24 01:47:21] 2024-06-24 05:46:59,537 | INFO     | model: linear, x: [1719197448.0, 1719197509.0, 1719197570.0, 1719197631.0, 1719197692.0, 1719197753.0, 1719197814.0, 1719197875.0, 1719197936.0, 1719197997.0, 1719
[2024-06-24 01:47:21] 2024-06-24 05:46:59,537 | INFO     | sum of square deviations: 1444149868.0
[2024-06-24 01:47:21] 2024-06-24 05:46:59,538 | INFO     | sum of deviations: -16993919178.999998
[2024-06-24 01:47:21] 2024-06-24 05:46:59,538 | INFO     | mean x: 1719202511.0
[2024-06-24 01:47:21] 2024-06-24 05:46:59,538 | INFO     | mean y: 2805282.095808383
[2024-06-24 01:47:21] 2024-06-24 05:46:59,538 | INFO     | -- intersect: 20233384650.377728
[2024-06-24 01:47:21] 2024-06-24 05:46:59,538 | INFO     | intersect: 20233384650.377728
[2024-06-24 01:47:21] 2024-06-24 05:46:59,539 | INFO     | chi2: 0.07352423719363126
[2024-06-24 01:47:21] 2024-06-24 05:46:59,539 | INFO     | -- intersect: 20233384650.377728
[2024-06-24 01:47:21] 2024-06-24 05:46:59,539 | INFO     | current memory leak: -11.77 B/s (using 167 data points, chi2=0.07)
[2024-06-24 01:47:21] 2024-06-24 05:46:59,539 | INFO     | ..............................
[2024-06-24 01:47:21] 2024-06-24 05:46:59,539 | INFO     | . Timing measurements:
[2024-06-24 01:47:21] 2024-06-24 05:46:59,539 | INFO     | . get job = 0 s
[2024-06-24 01:47:21] 2024-06-24 05:46:59,539 | INFO     | . initial setup = 2 s
[2024-06-24 01:47:21] 2024-06-24 05:46:59,539 | INFO     | . payload setup = 4 s
[2024-06-24 01:47:21] 2024-06-24 05:46:59,540 | INFO     | . stage-in = 0 s
[2024-06-24 01:47:21] 2024-06-24 05:46:59,540 | INFO     | . payload execution = 12353 s
[2024-06-24 01:47:21] 2024-06-24 05:46:59,540 | INFO     | . stage-out = 1 s
[2024-06-24 01:47:21] 2024-06-24 05:46:59,540 | INFO     | . log creation = 0 s
[2024-06-24 01:47:21] 2024-06-24 05:46:59,540 | INFO     | ..............................
[2024-06-24 01:47:21] 2024-06-24 05:46:59,718 | INFO     | 
[2024-06-24 01:47:21] 2024-06-24 05:46:59,719 | INFO     | job summary report
[2024-06-24 01:47:21] 2024-06-24 05:46:59,719 | INFO     | --------------------------------------------------
[2024-06-24 01:47:21] 2024-06-24 05:46:59,719 | INFO     | PanDA job id: 6235133730
[2024-06-24 01:47:21] 2024-06-24 05:46:59,719 | INFO     | task id: 38921001
[2024-06-24 01:47:21] 2024-06-24 05:46:59,719 | INFO     | errors: (none)
[2024-06-24 01:47:21] 2024-06-24 05:46:59,719 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-24 01:47:21] 2024-06-24 05:46:59,719 | INFO     | pilot state: finished 
[2024-06-24 01:47:21] 2024-06-24 05:46:59,719 | INFO     | transexitcode: 0
[2024-06-24 01:47:21] 2024-06-24 05:46:59,719 | INFO     | exeerrorcode: 0
[2024-06-24 01:47:21] 2024-06-24 05:46:59,719 | INFO     | exeerrordiag: 
[2024-06-24 01:47:21] 2024-06-24 05:46:59,720 | INFO     | exitcode: 0
[2024-06-24 01:47:21] 2024-06-24 05:46:59,720 | INFO     | exitmsg: OK
[2024-06-24 01:47:21] 2024-06-24 05:46:59,720 | INFO     | cpuconsumptiontime: 135660 s
[2024-06-24 01:47:21] 2024-06-24 05:46:59,720 | INFO     | nevents: 400
[2024-06-24 01:47:21] 2024-06-24 05:46:59,720 | INFO     | neventsw: 0
[2024-06-24 01:47:21] 2024-06-24 05:46:59,720 | INFO     | pid: 1957591
[2024-06-24 01:47:21] 2024-06-24 05:46:59,720 | INFO     | pgrp: 1957591
[2024-06-24 01:47:21] 2024-06-24 05:46:59,720 | INFO     | corecount: 12
[2024-06-24 01:47:21] 2024-06-24 05:46:59,720 | INFO     | event service: False
[2024-06-24 01:47:21] 2024-06-24 05:46:59,720 | INFO     | sizes: {0: 2386965, 1: 2387164, 4: 2387370, 11: 2387398, 12361: 2417126, 12364: 2426100, 12366: 2426284, 12409: 2426454}
[2024-06-24 01:47:21] 2024-06-24 05:46:59,720 | INFO     | --------------------------------------------------
[2024-06-24 01:47:21] 2024-06-24 05:46:59,720 | INFO     | 
[2024-06-24 01:47:21] 2024-06-24 05:46:59,721 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/9
[2024-06-24 01:47:21] 2024-06-24 05:46:59,736 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-24 01:47:21] 2024-06-24 05:46:59,736 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-24 01:47:21] 2024-06-24 05:46:59,736 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-24 01:47:21] 2024-06-24 05:46:59,737 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-24 01:47:21] 2024-06-24 05:46:59,737 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-24 01:47:21] 2024-06-24 05:46:59,737 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-24 01:47:21] 2024-06-24 05:46:59,737 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-24 01:47:21] 2024-06-24 05:46:59,737 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-24 01:47:21] 2024-06-24 05:46:59,737 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-24 01:47:21] 2024-06-24 05:46:59,737 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-24 01:47:21] 2024-06-24 05:46:59,737 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-24 01:47:21] 2024-06-24 05:46:59,737 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-24 01:47:21] 2024-06-24 05:46:59,737 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-24 01:47:21] 2024-06-24 05:46:59,737 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-24 01:47:21] 2024-06-24 05:46:59,738 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-24 01:47:21] 2024-06-24 05:46:59,738 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-24 01:47:21] 2024-06-24 05:46:59,738 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-24 01:47:21] 2024-06-24 05:46:59,738 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-24 01:47:21] 2024-06-24 05:46:59,738 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-24 01:47:21] 2024-06-24 05:46:59,738 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-24 01:47:21] 2024-06-24 05:46:59,738 | INFO     | job 6235133730 has completed (purged errors)
[2024-06-24 01:47:21] 2024-06-24 05:46:59,738 | INFO     | overall cleanup function is called
[2024-06-24 01:47:21] 2024-06-24 05:47:00,746 | INFO     | --- collectZombieJob: --- 10, [1957591]
[2024-06-24 01:47:21] 2024-06-24 05:47:00,747 | INFO     | zombie collector waiting for pid 1957591
[2024-06-24 01:47:21] 2024-06-24 05:47:00,747 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-24 01:47:21] 2024-06-24 05:47:01,752 | INFO     | collected zombie processes
[2024-06-24 01:47:21] 2024-06-24 05:47:01,752 | INFO     | will now attempt to kill all subprocesses of pid=1957591
[2024-06-24 01:47:21] 2024-06-24 05:47:01,865 | INFO     | process IDs to be killed: [1957591] (in reverse order)
[2024-06-24 01:47:21] 2024-06-24 05:47:01,970 | WARNING  | found no corresponding commands to process id(s)
[2024-06-24 01:47:21] 2024-06-24 05:47:01,970 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-24 01:47:21] 2024-06-24 05:47:01,975 | INFO     | did not find any defunct processes belonging to 1957591
[2024-06-24 01:47:21] 2024-06-24 05:47:01,979 | INFO     | did not find any defunct processes belonging to 1957591
[2024-06-24 01:47:21] 2024-06-24 05:47:01,979 | INFO     | ready for new job
[2024-06-24 01:47:21] 2024-06-24 05:47:01,979 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-24 01:47:21] 2024-06-24 05:47:01,980 | INFO     | *************************************
[2024-06-24 01:47:21] 2024-06-24 05:47:01,980 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-24 01:47:21] 2024-06-24 05:47:01,981 | INFO     | *************************************
[2024-06-24 01:47:21] 2024-06-24 05:47:01,981 | INFO     | 
[2024-06-24 01:47:21] 2024-06-24 05:47:02,002 | INFO     | architecture information:
[2024-06-24 01:47:21] 2024-06-24 05:47:02,003 | INFO     | executing command: cat /etc/os-release
[2024-06-24 01:47:21] 2024-06-24 05:47:02,012 | INFO     | cat /etc/os-release:
[2024-06-24 01:47:21] NAME="CentOS Linux"
[2024-06-24 01:47:21] VERSION="7 (Core)"
[2024-06-24 01:47:21] ID="centos"
[2024-06-24 01:47:21] ID_LIKE="rhel fedora"
[2024-06-24 01:47:21] VERSION_ID="7"
[2024-06-24 01:47:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-24 01:47:21] ANSI_COLOR="0;31"
[2024-06-24 01:47:21] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-24 01:47:21] HOME_URL="https://www.centos.org/"
[2024-06-24 01:47:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-24 01:47:21] 
[2024-06-24 01:47:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-24 01:47:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-24 01:47:21] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-24 01:47:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-24 01:47:21] 
[2024-06-24 01:47:21] 2024-06-24 05:47:02,012 | INFO     | *************************************
[2024-06-24 01:47:21] 2024-06-24 05:47:02,515 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/9
[2024-06-24 01:47:21] 2024-06-24 05:47:02,530 | INFO     | sufficient remaining disk space (390564151296 B)
[2024-06-24 01:47:21] 2024-06-24 05:47:02,530 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-24 01:47:21] 2024-06-24 05:47:02,531 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-24 01:47:21] 2024-06-24 05:47:02,531 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-24 01:47:21] 2024-06-24 05:47:02,726 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-24 01:47:21] 2024-06-24 05:47:02,806 | INFO     | all data control threads have been joined
[2024-06-24 01:47:21] 2024-06-24 05:47:02,830 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-24 01:47:21] 2024-06-24 05:47:02,831 | INFO     | aborting loop
[2024-06-24 01:47:21] 2024-06-24 05:47:03,455 | INFO     | found 0 job(s) in 20 queues
[2024-06-24 01:47:21] 2024-06-24 05:47:03,455 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-24 01:47:21] 2024-06-24 05:47:03,455 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-24 01:47:21] 2024-06-24 05:47:03,534 | INFO     | [job] retrieve thread has finished
[2024-06-24 01:47:21] 2024-06-24 05:47:03,760 | INFO     | [payload] failed_post thread has finished
[2024-06-24 01:47:21] 2024-06-24 05:47:03,762 | INFO     | [payload] validate_post thread has finished
[2024-06-24 01:47:21] 2024-06-24 05:47:03,811 | INFO     | [data] control thread has finished
[2024-06-24 01:47:21] 2024-06-24 05:47:03,811 | INFO     | all job control threads have been joined
[2024-06-24 01:47:21] 2024-06-24 05:47:03,834 | INFO     | [job] job monitor thread has finished
[2024-06-24 01:47:21] 2024-06-24 05:47:03,842 | INFO     | all payload control threads have been joined
[2024-06-24 01:47:21] 2024-06-24 05:47:04,162 | INFO     | [job] create_data_payload thread has finished
[2024-06-24 01:47:21] 2024-06-24 05:47:04,163 | INFO     | [data] copytool_in thread has finished
[2024-06-24 01:47:21] 2024-06-24 05:47:04,163 | INFO     | [job] validate thread has finished
[2024-06-24 01:47:21] 2024-06-24 05:47:04,534 | INFO     | [data] copytool_out thread has finished
[2024-06-24 01:47:21] 2024-06-24 05:47:04,626 | INFO     | [payload] validate_pre thread has finished
[2024-06-24 01:47:21] 2024-06-24 05:47:04,636 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-24 01:47:21] 2024-06-24 05:47:04,816 | INFO     | [job] control thread has finished
[2024-06-24 01:47:21] 2024-06-24 05:47:04,846 | INFO     | [payload] control thread has finished
[2024-06-24 01:47:21] 2024-06-24 05:47:04,966 | INFO     | [payload] execute_payloads thread has finished
[2024-06-24 01:47:21] 2024-06-24 05:47:05,638 | INFO     | [job] queue monitor thread has finished
[2024-06-24 01:47:21] 2024-06-24 05:47:06,730 | INFO     | [data] queue_monitor thread has finished
[2024-06-24 01:47:21] 2024-06-24 05:47:13,470 | INFO     | job.realtimelogging is not enabled
[2024-06-24 01:47:21] 2024-06-24 05:47:14,474 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-24 01:47:21] 2024-06-24 05:47:15,924 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139972976834368)>', '<ExcThread(monitor, started 139972539557632)>']
[2024-06-24 01:47:21] 2024-06-24 05:47:16,502 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-24 01:47:21] 2024-06-24 05:47:16,503 | INFO     | [monitor] control thread has ended
[2024-06-24 01:47:21] 2024-06-24 05:47:20,949 | INFO     | all workflow threads have been joined
[2024-06-24 01:47:21] 2024-06-24 05:47:20,949 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-24 01:47:21] 2024-06-24 05:47:20,950 | INFO     | traces error code: 0
[2024-06-24 01:47:21] 2024-06-24 05:47:20,950 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-24 01:47:21] 2024-06-24 05:47:21,041 [wrapper] ==== pilot stdout END ====
[2024-06-24 01:47:21] 2024-06-24 05:47:21,043 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-24 01:47:21] 2024-06-24 05:47:21,044 [wrapper] pilotpid: 1950036
[2024-06-24 01:47:21] 2024-06-24 05:47:21,046 [wrapper] Pilot exit status: 0
[2024-06-24 01:47:21] 2024-06-24 05:47:21,054 [wrapper] pandaids: 6235133730
[2024-06-24 01:47:21] 2024-06-24 05:47:21,109 [wrapper] cleanup supervisor_pilot 2500566 1950037
[2024-06-24 01:47:21] 2024-06-24 05:47:21,112 [wrapper] Test setup, not cleaning
[2024-06-24 01:47:21] 2024-06-24 05:47:21,114 [wrapper] ==== wrapper stdout END ====
[2024-06-24 01:47:21] 2024-06-24 05:47:21,116 [wrapper] ==== wrapper stderr END ====
[2024-06-24 01:47:21] 2024-06-24 05:47:21,119 [wrapper] apfmon messages muted
[2024-06-24 01:47:21]  *** Error codes and diagnostics ***
[2024-06-24 01:47:21]     "exeErrorCode": 0,
[2024-06-24 01:47:21]     "exeErrorDiag": "",
[2024-06-24 01:47:21]     "pilotErrorCode": 0,
[2024-06-24 01:47:21]     "pilotErrorDiag": "",
[2024-06-24 01:47:21]  *** Listing of results directory ***
[2024-06-24 01:47:21] total 961060
[2024-06-24 01:47:21] -rw-r--r-- 1 boinc boinc    469766 Jun 17 19:40 pilot3.tar.gz
[2024-06-24 01:47:21] -rw-r--r-- 1 boinc boinc      5654 Jun 17 19:44 queuedata.json
[2024-06-24 01:47:21] -rwx------ 1 boinc boinc     32308 Jun 17 19:45 runpilot2-wrapper.sh
[2024-06-24 01:47:21] -rw-r--r-- 1 boinc boinc       100 Jun 23 22:19 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-24 01:47:21] -rwxr-xr-x 1 boinc boinc      7986 Jun 23 22:19 run_atlas
[2024-06-24 01:47:21] -rw-r--r-- 1 boinc boinc       105 Jun 23 22:19 job.xml
[2024-06-24 01:47:21] -rw-r--r-- 2 boinc boinc     17537 Jun 23 22:19 start_atlas.sh
[2024-06-24 01:47:21] drwxrwx--x 2 boinc boinc      4096 Jun 23 22:19 shared
[2024-06-24 01:47:21] -rw-r--r-- 2 boinc boinc    482541 Jun 23 22:19 input.tar.gz
[2024-06-24 01:47:21] -rw-r--r-- 1 boinc boinc      7598 Jun 23 22:19 init_data.xml
[2024-06-24 01:47:21] -rw-r--r-- 2 boinc boinc 617529625 Jun 23 22:19 EVNT.38776190._000377.pool.root.1
[2024-06-24 01:47:21] -rw-r--r-- 1 boinc boinc         0 Jun 23 22:19 boinc_lockfile
[2024-06-24 01:47:21] -rw-r--r-- 1 boinc boinc      2653 Jun 23 22:19 pandaJob.out
[2024-06-24 01:47:21] -rw------- 1 boinc boinc       460 Jun 23 22:19 setup.sh.local
[2024-06-24 01:47:21] -rw------- 1 boinc boinc   1024662 Jun 23 22:19 agis_schedconf.cvmfs.json
[2024-06-24 01:47:21] -rw------- 1 boinc boinc   1321363 Jun 23 22:19 cric_ddmendpoints.json
[2024-06-24 01:47:21] drwx------ 4 boinc boinc      4096 Jun 23 22:19 pilot3
[2024-06-24 01:47:21] -rw-r--r-- 1 boinc boinc       533 Jun 24 01:45 boinc_task_state.xml
[2024-06-24 01:47:21] -rw------- 1 boinc boinc 359696854 Jun 24 01:45 HITS.38921001._060742.pool.root.1
[2024-06-24 01:47:21] -rw------- 1 boinc boinc      1028 Jun 24 01:46 memory_monitor_summary.json
[2024-06-24 01:47:21] -rw------- 1 boinc boinc         0 Jun 24 01:46 agis_ddmendpoints.agis.ALL.json
[2024-06-24 01:47:21] -rw------- 1 boinc boinc    454122 Jun 24 01:46 log.38921001._060742.job.log.tgz.1
[2024-06-24 01:47:21] -rw------- 1 boinc boinc        95 Jun 24 01:46 pilot_heartbeat.json
[2024-06-24 01:47:21] -rw------- 1 boinc boinc      7698 Jun 24 01:46 heartbeat.json
[2024-06-24 01:47:21] -rw-r--r-- 1 boinc boinc      8192 Jun 24 01:47 boinc_mmap_file
[2024-06-24 01:47:21] -rw-r--r-- 1 boinc boinc        29 Jun 24 01:47 wrapper_checkpoint.txt
[2024-06-24 01:47:21] -rw------- 1 boinc boinc      4291 Jun 24 01:47 pilotlog.txt
[2024-06-24 01:47:21] -rw------- 1 boinc boinc   1226767 Jun 24 01:47 log.38921001._060742.job.log.1
[2024-06-24 01:47:21] -rw------- 1 boinc boinc       357 Jun 24 01:47 output.list
[2024-06-24 01:47:21] -rw-r--r-- 1 boinc boinc       620 Jun 24 01:47 runtime_log
[2024-06-24 01:47:21] -rw------- 1 boinc boinc   1699840 Jun 24 01:47 result.tar.gz
[2024-06-24 01:47:21] -rw------- 1 boinc boinc       645 Jun 24 01:47 ycoMDmUDbd5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmrvVKDm6b9mxn.diag
[2024-06-24 01:47:21] -rw-r--r-- 1 boinc boinc     11460 Jun 24 01:47 runtime_log.err
[2024-06-24 01:47:21] -rw-r--r-- 1 boinc boinc     21234 Jun 24 01:47 stderr.txt
[2024-06-24 01:47:21] HITS file was successfully produced:
[2024-06-24 01:47:21] -rw------- 1 boinc boinc 359696854 Jun 24 01:45 shared/HITS.pool.root.1
[2024-06-24 01:47:21]  *** Contents of shared directory: ***
[2024-06-24 01:47:21] total 956488
[2024-06-24 01:47:21] -rw-r--r-- 2 boinc boinc     17537 Jun 23 22:19 start_atlas.sh
[2024-06-24 01:47:21] -rw-r--r-- 2 boinc boinc    482541 Jun 23 22:19 input.tar.gz
[2024-06-24 01:47:21] -rw-r--r-- 2 boinc boinc 617529625 Jun 23 22:19 ATLAS.root_0
[2024-06-24 01:47:21] -rw------- 1 boinc boinc 359696854 Jun 24 01:45 HITS.pool.root.1
[2024-06-24 01:47:21] -rw------- 1 boinc boinc   1699840 Jun 24 01:47 result.tar.gz
01:47:22 (1945336): run_atlas exited; CPU time 135356.244962
01:47:22 (1945336): called boinc_finish(0)

</stderr_txt>
]]>

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