Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
05:08:20 (237924): wrapper (7.7.26015): starting
05:08:20 (237924): wrapper: running run_atlas (--nthreads 12)
[2024-06-18 05:08:20] Arguments: --nthreads 12
[2024-06-18 05:08:20] Threads: 12
[2024-06-18 05:08:20] Checking for CVMFS
[2024-06-18 05:08:21] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-18 05:08:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-18 05:08:22] Running cvmfs_config stat atlas.cern.ch
[2024-06-18 05:08:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-18 05:08:22] 2.10.1.0 44152 229535 134604 134010 3 181 35282108 45568000 11642 130560 0 1295857846 99.748 845126692 16755 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2024-06-18 05:08:22] CVMFS is ok
[2024-06-18 05:08:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-18 05:08:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-18 05:08:22] Further information can be found at the LHC@home message board.
[2024-06-18 05:08:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-18 05:08:22] Checking for apptainer binary...
[2024-06-18 05:08:22] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-18 05:08:22] Running /usr/bin/apptainer --version
[2024-06-18 05:08:23] apptainer version 1.1.8-1.el7
[2024-06-18 05:08:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-18 05:08:25] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0150.triumf.lcg
[2024-06-18 05:08:25] apptainer works
[2024-06-18 05:08:26] Set ATHENA_PROC_NUMBER=12
[2024-06-18 05:08:26] Set ATHENA_CORE_NUMBER=12
[2024-06-18 05:08:26] Starting ATLAS job with PandaID=6233616461
[2024-06-18 05:08:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-18 14:46:32]  *** The last 200 lines of the pilot log: ***
[2024-06-18 14:46:32] 2024-06-18 21:46:10,070 | INFO     | chi2: 6.987658771525397
[2024-06-18 14:46:32] 2024-06-18 21:46:10,071 | INFO     | model: linear, x: [1718712598.0, 1718712659.0, 1718712721.0, 1718712783.0, 1718712842.0, 1718712903.0, 1718712964.0, 1718713025.0, 1718713086.0, 1718713147.0, 1718
[2024-06-18 14:46:32] 2024-06-18 21:46:10,071 | INFO     | sum of square deviations: 55042315429.857574
[2024-06-18 14:46:32] 2024-06-18 21:46:10,076 | INFO     | sum of deviations: 582466270815.7755
[2024-06-18 14:46:32] 2024-06-18 21:46:10,077 | INFO     | mean x: 1718729709.4661922
[2024-06-18 14:46:32] 2024-06-18 21:46:10,077 | INFO     | mean y: 2698420.909252669
[2024-06-18 14:46:32] 2024-06-18 21:46:10,077 | INFO     | -- intersect: -18185164436.87323
[2024-06-18 14:46:32] 2024-06-18 21:46:10,077 | INFO     | intersect: -18185164436.87323
[2024-06-18 14:46:32] 2024-06-18 21:46:10,078 | INFO     | chi2: 6.21437143137204
[2024-06-18 14:46:32] 2024-06-18 21:46:10,078 | INFO     | current chi2=6.21437143137204 (change=11.066472554505538 %)
[2024-06-18 14:46:32] 2024-06-18 21:46:10,078 | INFO     | right removable region: 561
[2024-06-18 14:46:32] 2024-06-18 21:46:10,078 | INFO     | model: linear, x: [1718712903.0, 1718712964.0, 1718713025.0, 1718713086.0, 1718713147.0, 1718713208.0, 1718713269.0, 1718713330.0, 1718713391.0, 1718713452.0, 1718
[2024-06-18 14:46:32] 2024-06-18 21:46:10,078 | INFO     | sum of square deviations: 55042190017.85763
[2024-06-18 14:46:32] 2024-06-18 21:46:10,084 | INFO     | sum of deviations: 376536462962.6937
[2024-06-18 14:46:32] 2024-06-18 21:46:10,084 | INFO     | mean x: 1718730014.4661922
[2024-06-18 14:46:32] 2024-06-18 21:46:10,084 | INFO     | mean y: 2712260.3523131674
[2024-06-18 14:46:32] 2024-06-18 21:46:10,084 | INFO     | -- intersect: -11754896225.519278
[2024-06-18 14:46:32] 2024-06-18 21:46:10,084 | INFO     | intersect: -11754896225.519278
[2024-06-18 14:46:32] 2024-06-18 21:46:10,085 | INFO     | chi2: 4.106514525088847
[2024-06-18 14:46:32] 2024-06-18 21:46:10,085 | INFO     | current chi2=4.106514525088847 (change=41.231896700181885 %)
[2024-06-18 14:46:32] 2024-06-18 21:46:10,085 | INFO     | model: linear, x: [1718713208.0, 1718713269.0, 1718713330.0, 1718713391.0, 1718713452.0, 1718713513.0, 1718713576.0, 1718713635.0, 1718713696.0, 1718713757.0, 1718
[2024-06-18 14:46:32] 2024-06-18 21:46:10,086 | INFO     | sum of square deviations: 53585987795.64811
[2024-06-18 14:46:32] 2024-06-18 21:46:10,091 | INFO     | sum of deviations: 249653897482.45966
[2024-06-18 14:46:32] 2024-06-18 21:46:10,091 | INFO     | mean x: 1718730166.9748654
[2024-06-18 14:46:32] 2024-06-18 21:46:10,091 | INFO     | mean y: 2725547.461400359
[2024-06-18 14:46:32] 2024-06-18 21:46:10,091 | INFO     | -- intersect: -8004735032.388196
[2024-06-18 14:46:32] 2024-06-18 21:46:10,091 | INFO     | intersect: -8004735032.388196
[2024-06-18 14:46:32] 2024-06-18 21:46:10,092 | INFO     | chi2: 2.6311395099885737
[2024-06-18 14:46:32] 2024-06-18 21:46:10,092 | INFO     | current chi2=2.6311395099885737 (change=35.92767068243482 %)
[2024-06-18 14:46:32] 2024-06-18 21:46:10,092 | INFO     | model: linear, x: [1718713513.0, 1718713576.0, 1718713635.0, 1718713696.0, 1718713757.0, 1718713818.0, 1718713879.0, 1718713940.0, 1718714001.0, 1718714062.0, 1718
[2024-06-18 14:46:32] 2024-06-18 21:46:10,093 | INFO     | sum of square deviations: 52155693035.853165
[2024-06-18 14:46:32] 2024-06-18 21:46:10,098 | INFO     | sum of deviations: 127380135353.84235
[2024-06-18 14:46:32] 2024-06-18 21:46:10,098 | INFO     | mean x: 1718730319.4836957
[2024-06-18 14:46:32] 2024-06-18 21:46:10,098 | INFO     | mean y: 2738570.3713768115
[2024-06-18 14:46:32] 2024-06-18 21:46:10,099 | INFO     | -- intersect: -4194925922.018482
[2024-06-18 14:46:32] 2024-06-18 21:46:10,099 | INFO     | intersect: -4194925922.018482
[2024-06-18 14:46:32] 2024-06-18 21:46:10,099 | INFO     | chi2: 1.1706337015098685
[2024-06-18 14:46:32] 2024-06-18 21:46:10,099 | INFO     | current chi2=1.1706337015098685 (change=55.508489874223656 %)
[2024-06-18 14:46:32] 2024-06-18 21:46:10,100 | INFO     | model: linear, x: [1718713818.0, 1718713879.0, 1718713940.0, 1718714001.0, 1718714062.0, 1718714123.0, 1718714186.0, 1718714245.0, 1718714306.0, 1718714367.0, 1718
[2024-06-18 14:46:32] 2024-06-18 21:46:10,100 | INFO     | sum of square deviations: 50751140763.934265
[2024-06-18 14:46:32] 2024-06-18 21:46:10,105 | INFO     | sum of deviations: 77212312355.96155
[2024-06-18 14:46:32] 2024-06-18 21:46:10,106 | INFO     | mean x: 1718730471.989031
[2024-06-18 14:46:32] 2024-06-18 21:46:10,106 | INFO     | mean y: 2744014.4936014623
[2024-06-18 14:46:32] 2024-06-18 21:46:10,106 | INFO     | -- intersect: -2612116500.193256
[2024-06-18 14:46:32] 2024-06-18 21:46:10,106 | INFO     | intersect: -2612116500.193256
[2024-06-18 14:46:32] 2024-06-18 21:46:10,106 | INFO     | chi2: 0.9490420499241494
[2024-06-18 14:46:32] 2024-06-18 21:46:10,106 | INFO     | current chi2=0.9490420499241494 (change=18.92920486569906 %)
[2024-06-18 14:46:32] 2024-06-18 21:46:10,106 | INFO     | left removable region: 40
[2024-06-18 14:46:32] 2024-06-18 21:46:10,107 | INFO     | model: linear, x: [1718715040.0, 1718715099.0, 1718715164.0, 1718715224.0, 1718715283.0, 1718715343.0, 1718715407.0, 1718715466.0, 1718715526.0, 1718715587.0, 1718
[2024-06-18 14:46:32] 2024-06-18 21:46:10,107 | INFO     | sum of square deviations: 43852529345.808014
[2024-06-18 14:46:32] 2024-06-18 21:46:10,112 | INFO     | sum of deviations: 72859087804.90979
[2024-06-18 14:46:32] 2024-06-18 21:46:10,112 | INFO     | mean x: 1718730899.019194
[2024-06-18 14:46:32] 2024-06-18 21:46:10,112 | INFO     | mean y: 2753024.3090211134
[2024-06-18 14:46:32] 2024-06-18 21:46:10,112 | INFO     | -- intersect: -2852844300.4692726
[2024-06-18 14:46:32] 2024-06-18 21:46:10,112 | INFO     | intersect: -2852844300.4692726
[2024-06-18 14:46:32] 2024-06-18 21:46:10,113 | INFO     | chi2: 0.0027355198641249717
[2024-06-18 14:46:32] 2024-06-18 21:46:10,113 | INFO     | -- intersect: -2852844300.4692726
[2024-06-18 14:46:32] 2024-06-18 21:46:10,113 | INFO     | current memory leak: 1.66 B/s (using 521 data points, chi2=0.00)
[2024-06-18 14:46:32] 2024-06-18 21:46:10,114 | INFO     | ..............................
[2024-06-18 14:46:32] 2024-06-18 21:46:10,114 | INFO     | . Timing measurements:
[2024-06-18 14:46:32] 2024-06-18 21:46:10,114 | INFO     | . get job = 0 s
[2024-06-18 14:46:32] 2024-06-18 21:46:10,114 | INFO     | . initial setup = 3 s
[2024-06-18 14:46:32] 2024-06-18 21:46:10,114 | INFO     | . payload setup = 18 s
[2024-06-18 14:46:32] 2024-06-18 21:46:10,114 | INFO     | . stage-in = 0 s
[2024-06-18 14:46:32] 2024-06-18 21:46:10,114 | INFO     | . payload execution = 34570 s
[2024-06-18 14:46:32] 2024-06-18 21:46:10,114 | INFO     | . stage-out = 2 s
[2024-06-18 14:46:32] 2024-06-18 21:46:10,114 | INFO     | . log creation = 0 s
[2024-06-18 14:46:32] 2024-06-18 21:46:10,114 | INFO     | ..............................
[2024-06-18 14:46:32] 2024-06-18 21:46:10,277 | INFO     | 
[2024-06-18 14:46:32] 2024-06-18 21:46:10,277 | INFO     | job summary report
[2024-06-18 14:46:32] 2024-06-18 21:46:10,277 | INFO     | --------------------------------------------------
[2024-06-18 14:46:32] 2024-06-18 21:46:10,277 | INFO     | PanDA job id: 6233616461
[2024-06-18 14:46:32] 2024-06-18 21:46:10,277 | INFO     | task id: 38921007
[2024-06-18 14:46:32] 2024-06-18 21:46:10,277 | INFO     | errors: (none)
[2024-06-18 14:46:32] 2024-06-18 21:46:10,278 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-18 14:46:32] 2024-06-18 21:46:10,278 | INFO     | pilot state: finished 
[2024-06-18 14:46:32] 2024-06-18 21:46:10,278 | INFO     | transexitcode: 0
[2024-06-18 14:46:32] 2024-06-18 21:46:10,278 | INFO     | exeerrorcode: 0
[2024-06-18 14:46:32] 2024-06-18 21:46:10,278 | INFO     | exeerrordiag: 
[2024-06-18 14:46:32] 2024-06-18 21:46:10,278 | INFO     | exitcode: 0
[2024-06-18 14:46:32] 2024-06-18 21:46:10,278 | INFO     | exitmsg: OK
[2024-06-18 14:46:32] 2024-06-18 21:46:10,278 | INFO     | cpuconsumptiontime: 124999 s
[2024-06-18 14:46:32] 2024-06-18 21:46:10,278 | INFO     | nevents: 400
[2024-06-18 14:46:32] 2024-06-18 21:46:10,278 | INFO     | neventsw: 0
[2024-06-18 14:46:32] 2024-06-18 21:46:10,278 | INFO     | pid: 250380
[2024-06-18 14:46:32] 2024-06-18 21:46:10,278 | INFO     | pgrp: 250380
[2024-06-18 14:46:32] 2024-06-18 21:46:10,278 | INFO     | corecount: 12
[2024-06-18 14:46:32] 2024-06-18 21:46:10,278 | INFO     | event service: False
[2024-06-18 14:46:32] 2024-06-18 21:46:10,278 | INFO     | sizes: {0: 2379781, 1: 2381314, 2: 2381314, 12: 2381342, 19: 2381576, 23: 2381604, 34589: 2421090, 34593: 2430044, 34596: 2430100, 34606: 2430270}
[2024-06-18 14:46:32] 2024-06-18 21:46:10,278 | INFO     | --------------------------------------------------
[2024-06-18 14:46:32] 2024-06-18 21:46:10,278 | INFO     | 
[2024-06-18 14:46:32] 2024-06-18 21:46:10,279 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-06-18 14:46:32] 2024-06-18 21:46:10,297 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-18 14:46:32] 2024-06-18 21:46:10,297 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-18 14:46:32] 2024-06-18 21:46:10,297 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-18 14:46:32] 2024-06-18 21:46:10,298 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-18 14:46:32] 2024-06-18 21:46:10,298 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-18 14:46:32] 2024-06-18 21:46:10,298 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-18 14:46:32] 2024-06-18 21:46:10,298 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-18 14:46:32] 2024-06-18 21:46:10,298 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-18 14:46:32] 2024-06-18 21:46:10,298 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-18 14:46:32] 2024-06-18 21:46:10,298 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-18 14:46:32] 2024-06-18 21:46:10,298 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-18 14:46:32] 2024-06-18 21:46:10,298 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-18 14:46:32] 2024-06-18 21:46:10,298 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-18 14:46:32] 2024-06-18 21:46:10,298 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-18 14:46:32] 2024-06-18 21:46:10,298 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-18 14:46:32] 2024-06-18 21:46:10,298 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-18 14:46:32] 2024-06-18 21:46:10,298 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-18 14:46:32] 2024-06-18 21:46:10,298 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-18 14:46:32] 2024-06-18 21:46:10,298 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-18 14:46:32] 2024-06-18 21:46:10,299 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-18 14:46:32] 2024-06-18 21:46:10,299 | INFO     | job 6233616461 has completed (purged errors)
[2024-06-18 14:46:32] 2024-06-18 21:46:10,299 | INFO     | overall cleanup function is called
[2024-06-18 14:46:32] 2024-06-18 21:46:11,306 | INFO     | --- collectZombieJob: --- 10, [250380]
[2024-06-18 14:46:32] 2024-06-18 21:46:11,306 | INFO     | zombie collector waiting for pid 250380
[2024-06-18 14:46:32] 2024-06-18 21:46:11,306 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-18 14:46:32] 2024-06-18 21:46:12,312 | INFO     | collected zombie processes
[2024-06-18 14:46:32] 2024-06-18 21:46:12,312 | INFO     | will now attempt to kill all subprocesses of pid=250380
[2024-06-18 14:46:32] 2024-06-18 21:46:12,532 | INFO     | process IDs to be killed: [250380] (in reverse order)
[2024-06-18 14:46:32] 2024-06-18 21:46:12,646 | WARNING  | found no corresponding commands to process id(s)
[2024-06-18 14:46:32] 2024-06-18 21:46:12,647 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-18 14:46:32] 2024-06-18 21:46:12,668 | INFO     | did not find any defunct processes belonging to 250380
[2024-06-18 14:46:32] 2024-06-18 21:46:12,680 | INFO     | did not find any defunct processes belonging to 250380
[2024-06-18 14:46:32] 2024-06-18 21:46:12,681 | INFO     | ready for new job
[2024-06-18 14:46:32] 2024-06-18 21:46:12,681 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-18 14:46:32] 2024-06-18 21:46:12,772 | INFO     | *************************************
[2024-06-18 14:46:32] 2024-06-18 21:46:12,772 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-18 14:46:32] 2024-06-18 21:46:12,772 | INFO     | *************************************
[2024-06-18 14:46:32] 2024-06-18 21:46:12,772 | INFO     | 
[2024-06-18 14:46:32] 2024-06-18 21:46:12,775 | INFO     | architecture information:
[2024-06-18 14:46:32] 2024-06-18 21:46:12,775 | INFO     | executing command: cat /etc/os-release
[2024-06-18 14:46:32] 2024-06-18 21:46:12,795 | INFO     | cat /etc/os-release:
[2024-06-18 14:46:32] NAME="CentOS Linux"
[2024-06-18 14:46:32] VERSION="7 (Core)"
[2024-06-18 14:46:32] ID="centos"
[2024-06-18 14:46:32] ID_LIKE="rhel fedora"
[2024-06-18 14:46:32] VERSION_ID="7"
[2024-06-18 14:46:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-18 14:46:32] ANSI_COLOR="0;31"
[2024-06-18 14:46:32] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-18 14:46:32] HOME_URL="https://www.centos.org/"
[2024-06-18 14:46:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-18 14:46:32] 
[2024-06-18 14:46:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-18 14:46:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-18 14:46:32] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-18 14:46:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-18 14:46:32] 
[2024-06-18 14:46:32] 2024-06-18 21:46:12,795 | INFO     | *************************************
[2024-06-18 14:46:32] 2024-06-18 21:46:13,298 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-06-18 14:46:32] 2024-06-18 21:46:13,443 | INFO     | sufficient remaining disk space (1982049812480 B)
[2024-06-18 14:46:32] 2024-06-18 21:46:13,444 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-18 14:46:32] 2024-06-18 21:46:13,445 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-18 14:46:32] 2024-06-18 21:46:13,446 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-18 14:46:32] 2024-06-18 21:46:13,447 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-18 14:46:32] 2024-06-18 21:46:13,447 | INFO     | aborting loop
[2024-06-18 14:46:32] 2024-06-18 21:46:13,448 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-18 14:46:32] 2024-06-18 21:46:13,448 | INFO     | found 0 job(s) in 20 queues
[2024-06-18 14:46:32] 2024-06-18 21:46:13,448 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-18 14:46:32] 2024-06-18 21:46:13,448 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-18 14:46:32] 2024-06-18 21:46:14,379 | INFO     | all payload control threads have been joined
[2024-06-18 14:46:32] 2024-06-18 21:46:14,451 | INFO     | [job] retrieve thread has finished
[2024-06-18 14:46:32] 2024-06-18 21:46:14,495 | INFO     | [job] job monitor thread has finished
[2024-06-18 14:46:32] 2024-06-18 21:46:14,515 | INFO     | all data control threads have been joined
[2024-06-18 14:46:32] 2024-06-18 21:46:14,775 | INFO     | [job] validate thread has finished
[2024-06-18 14:46:32] 2024-06-18 21:46:14,878 | INFO     | [job] create_data_payload thread has finished
[2024-06-18 14:46:32] 2024-06-18 21:46:14,883 | INFO     | [payload] validate_pre thread has finished
[2024-06-18 14:46:32] 2024-06-18 21:46:15,117 | INFO     | all job control threads have been joined
[2024-06-18 14:46:32] 2024-06-18 21:46:15,193 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-18 14:46:32] 2024-06-18 21:46:15,258 | INFO     | [payload] failed_post thread has finished
[2024-06-18 14:46:32] 2024-06-18 21:46:15,275 | INFO     | [data] copytool_in thread has finished
[2024-06-18 14:46:32] 2024-06-18 21:46:15,384 | INFO     | [payload] control thread has finished
[2024-06-18 14:46:32] 2024-06-18 21:46:15,453 | INFO     | [data] copytool_out thread has finished
[2024-06-18 14:46:32] 2024-06-18 21:46:15,520 | INFO     | [data] control thread has finished
[2024-06-18 14:46:32] 2024-06-18 21:46:15,652 | INFO     | [payload] execute_payloads thread has finished
[2024-06-18 14:46:32] 2024-06-18 21:46:15,933 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-18 14:46:32] 2024-06-18 21:46:15,992 | INFO     | [payload] validate_post thread has finished
[2024-06-18 14:46:32] 2024-06-18 21:46:16,124 | INFO     | [job] control thread has finished
[2024-06-18 14:46:32] 2024-06-18 21:46:16,198 | INFO     | [job] queue monitor thread has finished
[2024-06-18 14:46:32] 2024-06-18 21:46:19,938 | INFO     | [data] queue_monitor thread has finished
[2024-06-18 14:46:32] 2024-06-18 21:46:24,216 | INFO     | job.realtimelogging is not enabled
[2024-06-18 14:46:32] 2024-06-18 21:46:25,222 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-18 14:46:32] 2024-06-18 21:46:26,466 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139650845099840)>', '<ExcThread(monitor, started 139650542835456)>']
[2024-06-18 14:46:32] 2024-06-18 21:46:26,520 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-18 14:46:32] 2024-06-18 21:46:26,521 | INFO     | [monitor] control thread has ended
[2024-06-18 14:46:32] 2024-06-18 21:46:31,493 | INFO     | all workflow threads have been joined
[2024-06-18 14:46:32] 2024-06-18 21:46:31,493 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-18 14:46:32] 2024-06-18 21:46:31,494 | INFO     | traces error code: 0
[2024-06-18 14:46:32] 2024-06-18 21:46:31,494 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-18 14:46:32] 2024-06-18 21:46:31,647 [wrapper] ==== pilot stdout END ====
[2024-06-18 14:46:32] 2024-06-18 21:46:31,650 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-18 14:46:32] 2024-06-18 21:46:31,652 [wrapper] pilotpid: 242281
[2024-06-18 14:46:32] 2024-06-18 21:46:31,654 [wrapper] Pilot exit status: 0
[2024-06-18 14:46:32] 2024-06-18 21:46:31,663 [wrapper] pandaids: 6233616461
[2024-06-18 14:46:32] 2024-06-18 21:46:31,737 [wrapper] cleanup supervisor_pilot  24108 242282
[2024-06-18 14:46:32] 2024-06-18 21:46:31,740 [wrapper] Test setup, not cleaning
[2024-06-18 14:46:32] 2024-06-18 21:46:31,742 [wrapper] ==== wrapper stdout END ====
[2024-06-18 14:46:32] 2024-06-18 21:46:31,745 [wrapper] ==== wrapper stderr END ====
[2024-06-18 14:46:32] 2024-06-18 21:46:31,749 [wrapper] apfmon messages muted
[2024-06-18 14:46:32]  *** Error codes and diagnostics ***
[2024-06-18 14:46:32]     "exeErrorCode": 0,
[2024-06-18 14:46:32]     "exeErrorDiag": "",
[2024-06-18 14:46:32]     "pilotErrorCode": 0,
[2024-06-18 14:46:32]     "pilotErrorDiag": "",
[2024-06-18 14:46:32]  *** Listing of results directory ***
[2024-06-18 14:46:32] total 927800
[2024-06-18 14:46:32] -rw-r--r-- 1 boinc boinc    469766 Jun 16 22:10 pilot3.tar.gz
[2024-06-18 14:46:32] -rwx------ 1 boinc boinc     32308 Jun 16 22:17 runpilot2-wrapper.sh
[2024-06-18 14:46:32] -rw-r--r-- 1 boinc boinc      5654 Jun 16 22:17 queuedata.json
[2024-06-18 14:46:32] -rw-r--r-- 1 boinc boinc       100 Jun 18 05:08 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-18 14:46:32] -rwxr-xr-x 1 boinc boinc      7986 Jun 18 05:08 run_atlas
[2024-06-18 14:46:32] -rw-r--r-- 1 boinc boinc       105 Jun 18 05:08 job.xml
[2024-06-18 14:46:32] -rw-r--r-- 1 boinc boinc      6622 Jun 18 05:08 init_data.xml
[2024-06-18 14:46:32] -rw-r--r-- 2 boinc boinc 582368474 Jun 18 05:08 EVNT.38776201._000640.pool.root.1
[2024-06-18 14:46:32] -rw-r--r-- 2 boinc boinc     17537 Jun 18 05:08 start_atlas.sh
[2024-06-18 14:46:32] drwxrwx--x 2 boinc boinc      4096 Jun 18 05:08 shared
[2024-06-18 14:46:32] -rw-r--r-- 2 boinc boinc    482537 Jun 18 05:08 input.tar.gz
[2024-06-18 14:46:32] -rw-r--r-- 1 boinc boinc         0 Jun 18 05:08 boinc_lockfile
[2024-06-18 14:46:32] -rw-r--r-- 1 boinc boinc      2632 Jun 18 05:08 pandaJob.out
[2024-06-18 14:46:32] -rw------- 1 boinc boinc       424 Jun 18 05:08 setup.sh.local
[2024-06-18 14:46:32] -rw------- 1 boinc boinc   1022058 Jun 18 05:08 agis_schedconf.cvmfs.json
[2024-06-18 14:46:32] -rw------- 1 boinc boinc   1317955 Jun 18 05:08 cric_ddmendpoints.json
[2024-06-18 14:46:32] drwx------ 4 boinc boinc      4096 Jun 18 05:08 pilot3
[2024-06-18 14:46:32] -rw------- 1 boinc boinc 355377434 Jun 18 14:44 HITS.38921007._045315.pool.root.1
[2024-06-18 14:46:32] -rw-r--r-- 1 boinc boinc       533 Jun 18 14:44 boinc_task_state.xml
[2024-06-18 14:46:32] -rw------- 1 boinc boinc      1071 Jun 18 14:45 memory_monitor_summary.json
[2024-06-18 14:46:32] -rw------- 1 boinc boinc         0 Jun 18 14:45 agis_ddmendpoints.agis.ALL.json
[2024-06-18 14:46:32] -rw------- 1 boinc boinc    684100 Jun 18 14:45 log.38921007._045315.job.log.tgz.1
[2024-06-18 14:46:32] -rw------- 1 boinc boinc        95 Jun 18 14:46 pilot_heartbeat.json
[2024-06-18 14:46:32] -rw------- 1 boinc boinc      7802 Jun 18 14:46 heartbeat.json
[2024-06-18 14:46:32] -rw-r--r-- 1 boinc boinc      8192 Jun 18 14:46 boinc_mmap_file
[2024-06-18 14:46:32] -rw-r--r-- 1 boinc boinc        29 Jun 18 14:46 wrapper_checkpoint.txt
[2024-06-18 14:46:32] -rw------- 1 boinc boinc      4405 Jun 18 14:46 pilotlog.txt
[2024-06-18 14:46:32] -rw------- 1 boinc boinc   3710021 Jun 18 14:46 log.38921007._045315.job.log.1
[2024-06-18 14:46:32] -rw------- 1 boinc boinc       357 Jun 18 14:46 output.list
[2024-06-18 14:46:32] -rw-r--r-- 1 boinc boinc       620 Jun 18 14:46 runtime_log
[2024-06-18 14:46:32] -rw------- 1 boinc boinc   4413440 Jun 18 14:46 result.tar.gz
[2024-06-18 14:46:32] -rw-r--r-- 1 boinc boinc     11287 Jun 18 14:46 runtime_log.err
[2024-06-18 14:46:32] -rw------- 1 boinc boinc       661 Jun 18 14:46 Cs6NDmlvJd5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmKYVKDmCcgYtn.diag
[2024-06-18 14:46:32] -rw-r--r-- 1 boinc boinc     21983 Jun 18 14:46 stderr.txt
[2024-06-18 14:46:32] HITS file was successfully produced:
[2024-06-18 14:46:32] -rw------- 1 boinc boinc 355377434 Jun 18 14:44 shared/HITS.pool.root.1
[2024-06-18 14:46:32]  *** Contents of shared directory: ***
[2024-06-18 14:46:32] total 920584
[2024-06-18 14:46:32] -rw-r--r-- 2 boinc boinc 582368474 Jun 18 05:08 ATLAS.root_0
[2024-06-18 14:46:32] -rw-r--r-- 2 boinc boinc     17537 Jun 18 05:08 start_atlas.sh
[2024-06-18 14:46:32] -rw-r--r-- 2 boinc boinc    482537 Jun 18 05:08 input.tar.gz
[2024-06-18 14:46:32] -rw------- 1 boinc boinc 355377434 Jun 18 14:44 HITS.pool.root.1
[2024-06-18 14:46:32] -rw------- 1 boinc boinc   4413440 Jun 18 14:46 result.tar.gz
14:46:34 (237924): run_atlas exited; CPU time 124215.973923
14:46:34 (237924): called boinc_finish(0)

</stderr_txt>
]]>

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