Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
07:22:32 (1413256): wrapper (7.7.26015): starting
07:22:32 (1413256): wrapper: running run_atlas (--nthreads 4)
[2024-06-18 07:22:32] Arguments: --nthreads 4
[2024-06-18 07:22:32] Threads: 4
[2024-06-18 07:22:32] Checking for CVMFS
[2024-06-18 07:22:36] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-18 07:22:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-18 07:22:38] Running cvmfs_config stat atlas.cern.ch
[2024-06-18 07:22:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-18 07:22:38] 2.11.2.0 1413743 0 25040 133999 3 1 3574373 4194304 0 130560 0 0 0.000 1141 410 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2024-06-18 07:22:38] CVMFS is ok
[2024-06-18 07:22:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-18 07:22:38] Small home clusters do not require a local http proxy but it is suggested if
[2024-06-18 07:22:38] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2024-06-18 07:22:38] Further information can be found at the LHC@home message board.
[2024-06-18 07:22:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-18 07:22:38] Checking for apptainer binary...
[2024-06-18 07:22:38] apptainer is not installed, using version from CVMFS
[2024-06-18 07:22:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-18 07:22:39] Ryze
[2024-06-18 07:22:39] apptainer works
[2024-06-18 07:22:39] Set ATHENA_PROC_NUMBER=4
[2024-06-18 07:22:39] Set ATHENA_CORE_NUMBER=4
[2024-06-18 07:22:39] Starting ATLAS job with PandaID=6233202668
[2024-06-18 07:22:39] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-18 15:08:03]  *** The last 200 lines of the pilot log: ***
[2024-06-18 15:08:03] 2024-06-18 13:07:43,204 | INFO     | fitting pss+swap vs Time
[2024-06-18 15:08:03] 2024-06-18 13:07:43,204 | INFO     | model: linear, x: [1718688223.0, 1718688284.0, 1718688345.0, 1718688406.0, 1718688467.0, 1718688528.0, 1718688589.0, 1718688650.0, 1718688711.0, 1718688772.0, 1718
[2024-06-18 15:08:03] 2024-06-18 13:07:43,205 | INFO     | sum of square deviations: 29595449788.0
[2024-06-18 15:08:03] 2024-06-18 13:07:43,208 | INFO     | sum of deviations: 199804912448.00003
[2024-06-18 15:08:03] 2024-06-18 13:07:43,208 | INFO     | mean x: 1718702131.0
[2024-06-18 15:08:03] 2024-06-18 13:07:43,208 | INFO     | mean y: 2330070.5645514224
[2024-06-18 15:08:03] 2024-06-18 13:07:43,208 | INFO     | -- intersect: -11600978251.10474
[2024-06-18 15:08:03] 2024-06-18 13:07:43,208 | INFO     | intersect: -11600978251.10474
[2024-06-18 15:08:03] 2024-06-18 13:07:43,209 | INFO     | chi2: 4.701421082063003
[2024-06-18 15:08:03] 2024-06-18 13:07:43,209 | INFO     | model: linear, x: [1718688223.0, 1718688284.0, 1718688345.0, 1718688406.0, 1718688467.0, 1718688528.0, 1718688589.0, 1718688650.0, 1718688711.0, 1718688772.0, 1718
[2024-06-18 15:08:03] 2024-06-18 13:07:43,209 | INFO     | sum of square deviations: 28634631773.0
[2024-06-18 15:08:03] 2024-06-18 13:07:43,213 | INFO     | sum of deviations: 223940588407.0
[2024-06-18 15:08:03] 2024-06-18 13:07:43,213 | INFO     | mean x: 1718701978.5
[2024-06-18 15:08:03] 2024-06-18 13:07:43,213 | INFO     | mean y: 2333863.9159292034
[2024-06-18 15:08:03] 2024-06-18 13:07:43,213 | INFO     | -- intersect: -13438982071.722559
[2024-06-18 15:08:03] 2024-06-18 13:07:43,213 | INFO     | intersect: -13438982071.722559
[2024-06-18 15:08:03] 2024-06-18 13:07:43,213 | INFO     | chi2: 4.047077435253704
[2024-06-18 15:08:03] 2024-06-18 13:07:43,213 | INFO     | current chi2=4.047077435253704 (change=13.917997035104342 %)
[2024-06-18 15:08:03] 2024-06-18 13:07:43,213 | INFO     | right removable region: 451
[2024-06-18 15:08:03] 2024-06-18 13:07:43,214 | INFO     | model: linear, x: [1718688528.0, 1718688589.0, 1718688650.0, 1718688711.0, 1718688772.0, 1718688833.0, 1718688894.0, 1718688955.0, 1718689016.0, 1718689077.0, 1718
[2024-06-18 15:08:03] 2024-06-18 13:07:43,214 | INFO     | sum of square deviations: 28634631773.0
[2024-06-18 15:08:03] 2024-06-18 13:07:43,217 | INFO     | sum of deviations: 90911189478.5
[2024-06-18 15:08:03] 2024-06-18 13:07:43,217 | INFO     | mean x: 1718702283.5
[2024-06-18 15:08:03] 2024-06-18 13:07:43,217 | INFO     | mean y: 2347332.5508849556
[2024-06-18 15:08:03] 2024-06-18 13:07:43,217 | INFO     | -- intersect: -5454306351.388881
[2024-06-18 15:08:03] 2024-06-18 13:07:43,217 | INFO     | intersect: -5454306351.388881
[2024-06-18 15:08:03] 2024-06-18 13:07:43,218 | INFO     | chi2: 2.23807274968435
[2024-06-18 15:08:03] 2024-06-18 13:07:43,218 | INFO     | current chi2=2.23807274968435 (change=52.395824355680254 %)
[2024-06-18 15:08:03] 2024-06-18 13:07:43,218 | INFO     | model: linear, x: [1718688833.0, 1718688894.0, 1718688955.0, 1718689016.0, 1718689077.0, 1718689138.0, 1718689199.0, 1718689260.0, 1718689321.0, 1718689382.0, 1718
[2024-06-18 15:08:03] 2024-06-18 13:07:43,218 | INFO     | sum of square deviations: 27694837408.0
[2024-06-18 15:08:03] 2024-06-18 13:07:43,221 | INFO     | sum of deviations: 2757886189.0
[2024-06-18 15:08:03] 2024-06-18 13:07:43,222 | INFO     | mean x: 1718702436.0
[2024-06-18 15:08:03] 2024-06-18 13:07:43,222 | INFO     | mean y: 2361637.082774049
[2024-06-18 15:08:03] 2024-06-18 13:07:43,222 | INFO     | -- intersect: -168788878.85691702
[2024-06-18 15:08:03] 2024-06-18 13:07:43,222 | INFO     | intersect: -168788878.85691702
[2024-06-18 15:08:03] 2024-06-18 13:07:43,222 | INFO     | chi2: 0.7487637331927116
[2024-06-18 15:08:03] 2024-06-18 13:07:43,222 | INFO     | current chi2=0.7487637331927116 (change=66.54426299152631 %)
[2024-06-18 15:08:03] 2024-06-18 13:07:43,222 | INFO     | model: linear, x: [1718689138.0, 1718689199.0, 1718689260.0, 1718689321.0, 1718689382.0, 1718689443.0, 1718689504.0, 1718689565.0, 1718689626.0, 1718689687.0, 1718
[2024-06-18 15:08:03] 2024-06-18 13:07:43,223 | INFO     | sum of square deviations: 26775834130.5
[2024-06-18 15:08:03] 2024-06-18 13:07:43,226 | INFO     | sum of deviations: -12813236568.500006
[2024-06-18 15:08:03] 2024-06-18 13:07:43,226 | INFO     | mean x: 1718702588.5
[2024-06-18 15:08:03] 2024-06-18 13:07:43,226 | INFO     | mean y: 2364213.6990950224
[2024-06-18 15:08:03] 2024-06-18 13:07:43,226 | INFO     | -- intersect: 824827586.8292222
[2024-06-18 15:08:03] 2024-06-18 13:07:43,226 | INFO     | intersect: 824827586.8292222
[2024-06-18 15:08:03] 2024-06-18 13:07:43,227 | INFO     | chi2: 0.6849571397212355
[2024-06-18 15:08:03] 2024-06-18 13:07:43,227 | INFO     | current chi2=0.6849571397212355 (change=8.521592411989056 %)
[2024-06-18 15:08:03] 2024-06-18 13:07:43,227 | INFO     | left removable region: 30
[2024-06-18 15:08:03] 2024-06-18 13:07:43,227 | INFO     | model: linear, x: [1718690053.0, 1718690114.0, 1718690175.0, 1718690236.0, 1718690297.0, 1718690358.0, 1718690419.0, 1718690480.0, 1718690541.0, 1718690602.0, 1718
[2024-06-18 15:08:03] 2024-06-18 13:07:43,227 | INFO     | sum of square deviations: 23137810570.0
[2024-06-18 15:08:03] 2024-06-18 13:07:43,230 | INFO     | sum of deviations: 14316966325.999998
[2024-06-18 15:08:03] 2024-06-18 13:07:43,231 | INFO     | mean x: 1718702863.0
[2024-06-18 15:08:03] 2024-06-18 13:07:43,231 | INFO     | mean y: 2368212.8741092635
[2024-06-18 15:08:03] 2024-06-18 13:07:43,231 | INFO     | -- intersect: -1061112315.6541693
[2024-06-18 15:08:03] 2024-06-18 13:07:43,231 | INFO     | intersect: -1061112315.6541693
[2024-06-18 15:08:03] 2024-06-18 13:07:43,231 | INFO     | chi2: 0.012197867743432978
[2024-06-18 15:08:03] 2024-06-18 13:07:43,231 | INFO     | -- intersect: -1061112315.6541693
[2024-06-18 15:08:03] 2024-06-18 13:07:43,232 | INFO     | current memory leak: 0.62 B/s (using 421 data points, chi2=0.01)
[2024-06-18 15:08:03] 2024-06-18 13:07:43,232 | INFO     | ..............................
[2024-06-18 15:08:03] 2024-06-18 13:07:43,232 | INFO     | . Timing measurements:
[2024-06-18 15:08:03] 2024-06-18 13:07:43,232 | INFO     | . get job = 0 s
[2024-06-18 15:08:03] 2024-06-18 13:07:43,232 | INFO     | . initial setup = 1 s
[2024-06-18 15:08:03] 2024-06-18 13:07:43,232 | INFO     | . payload setup = 4 s
[2024-06-18 15:08:03] 2024-06-18 13:07:43,232 | INFO     | . stage-in = 0 s
[2024-06-18 15:08:03] 2024-06-18 13:07:43,232 | INFO     | . payload execution = 27831 s
[2024-06-18 15:08:03] 2024-06-18 13:07:43,232 | INFO     | . stage-out = 0 s
[2024-06-18 15:08:03] 2024-06-18 13:07:43,233 | INFO     | . log creation = 0 s
[2024-06-18 15:08:03] 2024-06-18 13:07:43,233 | INFO     | ..............................
[2024-06-18 15:08:03] 2024-06-18 13:07:43,570 | INFO     | 
[2024-06-18 15:08:03] 2024-06-18 13:07:43,570 | INFO     | job summary report
[2024-06-18 15:08:03] 2024-06-18 13:07:43,570 | INFO     | --------------------------------------------------
[2024-06-18 15:08:03] 2024-06-18 13:07:43,570 | INFO     | PanDA job id: 6233202668
[2024-06-18 15:08:03] 2024-06-18 13:07:43,570 | INFO     | task id: 38921013
[2024-06-18 15:08:03] 2024-06-18 13:07:43,570 | INFO     | errors: (none)
[2024-06-18 15:08:03] 2024-06-18 13:07:43,570 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-18 15:08:03] 2024-06-18 13:07:43,570 | INFO     | pilot state: finished 
[2024-06-18 15:08:03] 2024-06-18 13:07:43,570 | INFO     | transexitcode: 0
[2024-06-18 15:08:03] 2024-06-18 13:07:43,570 | INFO     | exeerrorcode: 0
[2024-06-18 15:08:03] 2024-06-18 13:07:43,570 | INFO     | exeerrordiag: 
[2024-06-18 15:08:03] 2024-06-18 13:07:43,570 | INFO     | exitcode: 0
[2024-06-18 15:08:03] 2024-06-18 13:07:43,571 | INFO     | exitmsg: OK
[2024-06-18 15:08:03] 2024-06-18 13:07:43,571 | INFO     | cpuconsumptiontime: 107758 s
[2024-06-18 15:08:03] 2024-06-18 13:07:43,571 | INFO     | nevents: 400
[2024-06-18 15:08:03] 2024-06-18 13:07:43,571 | INFO     | neventsw: 0
[2024-06-18 15:08:03] 2024-06-18 13:07:43,571 | INFO     | pid: 1469124
[2024-06-18 15:08:03] 2024-06-18 13:07:43,571 | INFO     | pgrp: 1469124
[2024-06-18 15:08:03] 2024-06-18 13:07:43,571 | INFO     | corecount: 4
[2024-06-18 15:08:03] 2024-06-18 13:07:43,571 | INFO     | event service: False
[2024-06-18 15:08:03] 2024-06-18 13:07:43,571 | INFO     | sizes: {0: 2379085, 2: 2379291, 11: 2379319, 27838: 2416701, 27839: 2425675, 27842: 2425731, 27847: 2426029}
[2024-06-18 15:08:03] 2024-06-18 13:07:43,571 | INFO     | --------------------------------------------------
[2024-06-18 15:08:03] 2024-06-18 13:07:43,571 | INFO     | 
[2024-06-18 15:08:03] 2024-06-18 13:07:43,571 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2024-06-18 15:08:03] 2024-06-18 13:07:43,583 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-18 15:08:03] 2024-06-18 13:07:43,583 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-18 15:08:03] 2024-06-18 13:07:43,583 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-18 15:08:03] 2024-06-18 13:07:43,583 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-18 15:08:03] 2024-06-18 13:07:43,583 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-18 15:08:03] 2024-06-18 13:07:43,583 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-18 15:08:03] 2024-06-18 13:07:43,583 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-18 15:08:03] 2024-06-18 13:07:43,583 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-18 15:08:03] 2024-06-18 13:07:43,583 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-18 15:08:03] 2024-06-18 13:07:43,583 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-18 15:08:03] 2024-06-18 13:07:43,583 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-18 15:08:03] 2024-06-18 13:07:43,584 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-18 15:08:03] 2024-06-18 13:07:43,584 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-18 15:08:03] 2024-06-18 13:07:43,584 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-18 15:08:03] 2024-06-18 13:07:43,584 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-18 15:08:03] 2024-06-18 13:07:43,584 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-18 15:08:03] 2024-06-18 13:07:43,584 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-18 15:08:03] 2024-06-18 13:07:43,584 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-18 15:08:03] 2024-06-18 13:07:43,584 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-18 15:08:03] 2024-06-18 13:07:43,584 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-18 15:08:03] 2024-06-18 13:07:43,584 | INFO     | job 6233202668 has completed (purged errors)
[2024-06-18 15:08:03] 2024-06-18 13:07:43,584 | INFO     | overall cleanup function is called
[2024-06-18 15:08:03] 2024-06-18 13:07:44,588 | INFO     | --- collectZombieJob: --- 10, [1469124]
[2024-06-18 15:08:03] 2024-06-18 13:07:44,589 | INFO     | zombie collector waiting for pid 1469124
[2024-06-18 15:08:03] 2024-06-18 13:07:44,589 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-18 15:08:03] 2024-06-18 13:07:45,594 | INFO     | collected zombie processes
[2024-06-18 15:08:03] 2024-06-18 13:07:45,594 | INFO     | will now attempt to kill all subprocesses of pid=1469124
[2024-06-18 15:08:03] 2024-06-18 13:07:45,631 | INFO     | process IDs to be killed: [1469124] (in reverse order)
[2024-06-18 15:08:03] 2024-06-18 13:07:45,662 | WARNING  | found no corresponding commands to process id(s)
[2024-06-18 15:08:03] 2024-06-18 13:07:45,663 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-18 15:08:03] 2024-06-18 13:07:45,665 | INFO     | did not find any defunct processes belonging to 1469124
[2024-06-18 15:08:03] 2024-06-18 13:07:45,667 | INFO     | did not find any defunct processes belonging to 1469124
[2024-06-18 15:08:03] 2024-06-18 13:07:45,667 | INFO     | ready for new job
[2024-06-18 15:08:03] 2024-06-18 13:07:45,667 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-18 15:08:03] 2024-06-18 13:07:45,669 | INFO     | *************************************
[2024-06-18 15:08:03] 2024-06-18 13:07:45,669 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-18 15:08:03] 2024-06-18 13:07:45,669 | INFO     | *************************************
[2024-06-18 15:08:03] 2024-06-18 13:07:45,669 | INFO     | 
[2024-06-18 15:08:03] 2024-06-18 13:07:45,689 | INFO     | architecture information:
[2024-06-18 15:08:03] 2024-06-18 13:07:45,690 | INFO     | executing command: cat /etc/os-release
[2024-06-18 15:08:03] 2024-06-18 13:07:45,698 | INFO     | cat /etc/os-release:
[2024-06-18 15:08:03] NAME="CentOS Linux"
[2024-06-18 15:08:03] VERSION="7 (Core)"
[2024-06-18 15:08:03] ID="centos"
[2024-06-18 15:08:03] ID_LIKE="rhel fedora"
[2024-06-18 15:08:03] VERSION_ID="7"
[2024-06-18 15:08:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-18 15:08:03] ANSI_COLOR="0;31"
[2024-06-18 15:08:03] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-18 15:08:03] HOME_URL="https://www.centos.org/"
[2024-06-18 15:08:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-18 15:08:03] 
[2024-06-18 15:08:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-18 15:08:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-18 15:08:03] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-18 15:08:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-18 15:08:03] 
[2024-06-18 15:08:03] 2024-06-18 13:07:45,698 | INFO     | *************************************
[2024-06-18 15:08:03] 2024-06-18 13:07:46,201 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2024-06-18 15:08:03] 2024-06-18 13:07:46,212 | INFO     | sufficient remaining disk space (171862654976 B)
[2024-06-18 15:08:03] 2024-06-18 13:07:46,212 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-18 15:08:03] 2024-06-18 13:07:46,212 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-18 15:08:03] 2024-06-18 13:07:46,348 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-18 15:08:03] 2024-06-18 13:07:46,592 | INFO     | all payload control threads have been joined
[2024-06-18 15:08:03] 2024-06-18 13:07:46,635 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-06-18 15:08:03] 2024-06-18 13:07:46,636 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-06-18 15:08:03] 2024-06-18 13:07:46,636 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-18 15:08:03] 2024-06-18 13:07:46,636 | INFO     | will abort loop
[2024-06-18 15:08:03] 2024-06-18 13:07:46,717 | INFO     | all job control threads have been joined
[2024-06-18 15:08:03] 2024-06-18 13:07:46,877 | INFO     | found 0 job(s) in 20 queues
[2024-06-18 15:08:03] 2024-06-18 13:07:46,877 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-18 15:08:03] 2024-06-18 13:07:46,877 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-18 15:08:03] 2024-06-18 13:07:47,192 | INFO     | all data control threads have been joined
[2024-06-18 15:08:03] 2024-06-18 13:07:47,217 | INFO     | [job] retrieve thread has finished
[2024-06-18 15:08:03] 2024-06-18 13:07:47,597 | INFO     | [payload] control thread has finished
[2024-06-18 15:08:03] 2024-06-18 13:07:47,629 | INFO     | [payload] execute_payloads thread has finished
[2024-06-18 15:08:03] 2024-06-18 13:07:47,641 | INFO     | [job] job monitor thread has finished
[2024-06-18 15:08:03] 2024-06-18 13:07:47,722 | INFO     | [job] control thread has finished
[2024-06-18 15:08:03] 2024-06-18 13:07:47,761 | INFO     | [job] create_data_payload thread has finished
[2024-06-18 15:08:03] 2024-06-18 13:07:47,877 | INFO     | [data] copytool_in thread has finished
[2024-06-18 15:08:03] 2024-06-18 13:07:48,198 | INFO     | [data] control thread has finished
[2024-06-18 15:08:03] 2024-06-18 13:07:48,286 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-18 15:08:03] 2024-06-18 13:07:48,353 | INFO     | [data] copytool_out thread has finished
[2024-06-18 15:08:03] 2024-06-18 13:07:48,418 | INFO     | [job] validate thread has finished
[2024-06-18 15:08:03] 2024-06-18 13:07:48,581 | INFO     | [payload] validate_pre thread has finished
[2024-06-18 15:08:03] 2024-06-18 13:07:48,647 | INFO     | [payload] failed_post thread has finished
[2024-06-18 15:08:03] 2024-06-18 13:07:48,778 | INFO     | [payload] validate_post thread has finished
[2024-06-18 15:08:03] 2024-06-18 13:07:49,170 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-18 15:08:03] 2024-06-18 13:07:49,289 | INFO     | [job] queue monitor thread has finished
[2024-06-18 15:08:03] 2024-06-18 13:07:53,175 | INFO     | [data] queue_monitor thread has finished
[2024-06-18 15:08:03] 2024-06-18 13:07:57,158 | INFO     | job.realtimelogging is not enabled
[2024-06-18 15:08:03] 2024-06-18 13:07:58,163 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-18 15:08:03] 2024-06-18 13:07:58,641 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140622200796992)>', '<ExcThread(monitor, started 140621750707968)>']
[2024-06-18 15:08:03] 2024-06-18 13:07:58,928 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-18 15:08:03] 2024-06-18 13:07:58,929 | INFO     | [monitor] control thread has ended
[2024-06-18 15:08:03] 2024-06-18 13:08:03,664 | INFO     | all workflow threads have been joined
[2024-06-18 15:08:03] 2024-06-18 13:08:03,665 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-18 15:08:03] 2024-06-18 13:08:03,665 | INFO     | traces error code: 0
[2024-06-18 15:08:03] 2024-06-18 13:08:03,665 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-18 15:08:03] 2024-06-18 13:08:03,726 [wrapper] ==== pilot stdout END ====
[2024-06-18 15:08:03] 2024-06-18 13:08:03,728 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-18 15:08:03] 2024-06-18 13:08:03,729 [wrapper] pilotpid: 1435800
[2024-06-18 15:08:03] 2024-06-18 13:08:03,730 [wrapper] Pilot exit status: 0
[2024-06-18 15:08:03] 2024-06-18 13:08:03,735 [wrapper] pandaids: 6233202668
[2024-06-18 15:08:03] 2024-06-18 13:08:03,752 [wrapper] cleanup supervisor_pilot 1725299 1435801
[2024-06-18 15:08:03] 2024-06-18 13:08:03,754 [wrapper] Test setup, not cleaning
[2024-06-18 15:08:03] 2024-06-18 13:08:03,756 [wrapper] ==== wrapper stdout END ====
[2024-06-18 15:08:03] 2024-06-18 13:08:03,757 [wrapper] ==== wrapper stderr END ====
[2024-06-18 15:08:03] 2024-06-18 13:08:03,760 [wrapper] apfmon messages muted
[2024-06-18 15:08:03]  *** Error codes and diagnostics ***
[2024-06-18 15:08:03]     "exeErrorCode": 0,
[2024-06-18 15:08:03]     "exeErrorDiag": "",
[2024-06-18 15:08:03]     "pilotErrorCode": 0,
[2024-06-18 15:08:03]     "pilotErrorDiag": "",
[2024-06-18 15:08:03]  *** Listing of results directory ***
[2024-06-18 15:08:03] insgesamt 883436
[2024-06-18 15:08:03] -rw-r--r-- 1 boinc boinc    469766 Jun 17 01:23 pilot3.tar.gz
[2024-06-18 15:08:03] -rw-r--r-- 1 boinc boinc      5654 Jun 17 01:34 queuedata.json
[2024-06-18 15:08:03] -rwx------ 1 boinc boinc     32308 Jun 17 01:35 runpilot2-wrapper.sh
[2024-06-18 15:08:03] -rw-r--r-- 1 boinc boinc       100 Jun 18 07:22 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-18 15:08:03] -rwxr-xr-x 1 boinc boinc      7986 Jun 18 07:22 run_atlas
[2024-06-18 15:08:03] -rw-r--r-- 1 boinc boinc       105 Jun 18 07:22 job.xml
[2024-06-18 15:08:03] -rw-r--r-- 2 boinc boinc     17537 Jun 18 07:22 start_atlas.sh
[2024-06-18 15:08:03] drwxrwx--x 2 boinc boinc      4096 Jun 18 07:22 shared
[2024-06-18 15:08:03] -rw-r--r-- 2 boinc boinc    482526 Jun 18 07:22 input.tar.gz
[2024-06-18 15:08:03] -rw-r--r-- 1 boinc boinc      9145 Jun 18 07:22 init_data.xml
[2024-06-18 15:08:03] -rw-r--r-- 2 boinc boinc 542072843 Jun 18 07:22 EVNT.38776210._000380.pool.root.1
[2024-06-18 15:08:03] -rw-r--r-- 1 boinc boinc         0 Jun 18 07:22 boinc_lockfile
[2024-06-18 15:08:03] -rw-r--r-- 1 boinc boinc      2645 Jun 18 07:22 pandaJob.out
[2024-06-18 15:08:03] -rw------- 1 boinc boinc       424 Jun 18 07:22 setup.sh.local
[2024-06-18 15:08:03] -rw------- 1 boinc boinc   1020977 Jun 18 07:23 agis_schedconf.cvmfs.json
[2024-06-18 15:08:03] -rw------- 1 boinc boinc   1316805 Jun 18 07:23 cric_ddmendpoints.json
[2024-06-18 15:08:03] drwx------ 4 boinc boinc      4096 Jun 18 07:23 pilot3
[2024-06-18 15:08:03] -rw-r--r-- 1 boinc boinc       532 Jun 18 15:07 boinc_task_state.xml
[2024-06-18 15:08:03] -rw------- 1 boinc boinc 351787621 Jun 18 15:07 HITS.38921013._041761.pool.root.1
[2024-06-18 15:08:03] -rw------- 1 boinc boinc      1024 Jun 18 15:07 memory_monitor_summary.json
[2024-06-18 15:08:03] -rw------- 1 boinc boinc        95 Jun 18 15:07 pilot_heartbeat.json
[2024-06-18 15:08:03] -rw------- 1 boinc boinc         0 Jun 18 15:07 agis_ddmendpoints.agis.ALL.json
[2024-06-18 15:08:03] -rw------- 1 boinc boinc    474475 Jun 18 15:07 log.38921013._041761.job.log.tgz.1
[2024-06-18 15:08:03] -rw------- 1 boinc boinc      7649 Jun 18 15:07 heartbeat.json
[2024-06-18 15:08:03] -rw-r--r-- 1 boinc boinc        29 Jun 18 15:07 wrapper_checkpoint.txt
[2024-06-18 15:08:03] -rw-r--r-- 1 boinc boinc      8192 Jun 18 15:07 boinc_mmap_file
[2024-06-18 15:08:03] -rw------- 1 boinc boinc      4477 Jun 18 15:08 pilotlog.txt
[2024-06-18 15:08:03] -rw------- 1 boinc boinc   3144389 Jun 18 15:08 log.38921013._041761.job.log.1
[2024-06-18 15:08:03] -rw------- 1 boinc boinc       357 Jun 18 15:08 output.list
[2024-06-18 15:08:03] -rw-r--r-- 1 boinc boinc       620 Jun 18 15:08 runtime_log
[2024-06-18 15:08:03] -rw------- 1 boinc boinc   3635200 Jun 18 15:08 result.tar.gz
[2024-06-18 15:08:03] -rw-r--r-- 1 boinc boinc     11056 Jun 18 15:08 runtime_log.err
[2024-06-18 15:08:03] -rw------- 1 boinc boinc       632 Jun 18 15:08 5eCNDm2ZEd5n7Olcko1bjSoqABFKDmABFKDmOtvXDmRipKDmQIhsrm.diag
[2024-06-18 15:08:03] -rw-r--r-- 1 boinc boinc     21601 Jun 18 15:08 stderr.txt
[2024-06-18 15:08:03] HITS file was successfully produced:
[2024-06-18 15:08:03] -rw------- 1 boinc boinc 351787621 Jun 18 15:07 shared/HITS.pool.root.1
[2024-06-18 15:08:03]  *** Contents of shared directory: ***
[2024-06-18 15:08:03] insgesamt 876968
[2024-06-18 15:08:03] -rw-r--r-- 2 boinc boinc     17537 Jun 18 07:22 start_atlas.sh
[2024-06-18 15:08:03] -rw-r--r-- 2 boinc boinc    482526 Jun 18 07:22 input.tar.gz
[2024-06-18 15:08:03] -rw-r--r-- 2 boinc boinc 542072843 Jun 18 07:22 ATLAS.root_0
[2024-06-18 15:08:03] -rw------- 1 boinc boinc 351787621 Jun 18 15:07 HITS.pool.root.1
[2024-06-18 15:08:03] -rw------- 1 boinc boinc   3635200 Jun 18 15:08 result.tar.gz
15:08:05 (1413256): run_atlas exited; CPU time 107701.192801
15:08:05 (1413256): called boinc_finish(0)

</stderr_txt>
]]>

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