Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
07:54:58 (3677497): wrapper (7.7.26015): starting
07:54:58 (3677497): wrapper: running run_atlas (--nthreads 12)
[2024-06-23 07:54:58] Arguments: --nthreads 12
[2024-06-23 07:54:58] Threads: 12
[2024-06-23 07:54:58] Checking for CVMFS
[2024-06-23 07:55:30] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-23 07:55:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-23 07:55:31] Running cvmfs_config stat atlas.cern.ch
[2024-06-23 07:55:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-23 07:55:32] 2.11.2.0 3679098 0 25124 134201 3 1 3715892 4194305 0 130560 0 0 0.000 1142 41 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://131.225.188.245:3126 1
[2024-06-23 07:55:32] CVMFS is ok
[2024-06-23 07:55:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-23 07:55:32] Checking for apptainer binary...
[2024-06-23 07:55:32] apptainer is not installed, using version from CVMFS
[2024-06-23 07:55:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-23 07:55:37] Trebeth
[2024-06-23 07:55:37] apptainer works
[2024-06-23 07:55:37] Set ATHENA_PROC_NUMBER=12
[2024-06-23 07:55:37] Set ATHENA_CORE_NUMBER=12
[2024-06-23 07:55:37] Starting ATLAS job with PandaID=6232626420
[2024-06-23 07:55:37] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-23 10:33:28]  *** The last 200 lines of the pilot log: ***
[2024-06-23 10:33:28] 2024-06-23 14:33:08,308 | INFO     | model: linear, x: [1719144464.0, 1719144525.0, 1719144586.0, 1719144647.0, 1719144708.0, 1719144769.0, 1719144830.0, 1719144891.0, 1719144952.0, 1719145013.0, 1719
[2024-06-23 10:33:28] 2024-06-23 14:33:08,308 | INFO     | sum of square deviations: 906703512.0
[2024-06-23 10:33:28] 2024-06-23 14:33:08,309 | INFO     | sum of deviations: 8827436026.0
[2024-06-23 10:33:28] 2024-06-23 14:33:08,309 | INFO     | mean x: 1719148795.0
[2024-06-23 10:33:28] 2024-06-23 14:33:08,309 | INFO     | mean y: 2765816.972027972
[2024-06-23 10:33:28] 2024-06-23 14:33:08,309 | INFO     | -- intersect: -16734431961.784882
[2024-06-23 10:33:28] 2024-06-23 14:33:08,309 | INFO     | intersect: -16734431961.784882
[2024-06-23 10:33:28] 2024-06-23 14:33:08,309 | INFO     | chi2: 0.12519872306158872
[2024-06-23 10:33:28] 2024-06-23 14:33:08,309 | INFO     | current chi2=0.12519872306158872 (change=91.82034038750983 %)
[2024-06-23 10:33:28] 2024-06-23 14:33:08,309 | INFO     | model: linear, x: [1719144769.0, 1719144830.0, 1719144891.0, 1719144952.0, 1719145013.0, 1719145074.0, 1719145135.0, 1719145196.0, 1719145257.0, 1719145318.0, 1719
[2024-06-23 10:33:28] 2024-06-23 14:33:08,310 | INFO     | sum of square deviations: 814878534.5
[2024-06-23 10:33:28] 2024-06-23 14:33:08,310 | INFO     | sum of deviations: 1018204008.9999981
[2024-06-23 10:33:28] 2024-06-23 14:33:08,310 | INFO     | mean x: 1719148947.5
[2024-06-23 10:33:28] 2024-06-23 14:33:08,310 | INFO     | mean y: 2778660.7536231885
[2024-06-23 10:33:28] 2024-06-23 14:33:08,311 | INFO     | -- intersect: -2145325966.2588918
[2024-06-23 10:33:28] 2024-06-23 14:33:08,311 | INFO     | intersect: -2145325966.2588918
[2024-06-23 10:33:28] 2024-06-23 14:33:08,311 | INFO     | chi2: 0.01750734919119467
[2024-06-23 10:33:28] 2024-06-23 14:33:08,311 | INFO     | current chi2=0.01750734919119467 (change=86.01635163436745 %)
[2024-06-23 10:33:28] 2024-06-23 14:33:08,311 | INFO     | model: linear, x: [1719145074.0, 1719145135.0, 1719145196.0, 1719145257.0, 1719145318.0, 1719145379.0, 1719145440.0, 1719145501.0, 1719145562.0, 1719145623.0, 1719
[2024-06-23 10:33:28] 2024-06-23 14:33:08,311 | INFO     | sum of square deviations: 729472282.0
[2024-06-23 10:33:28] 2024-06-23 14:33:08,312 | INFO     | sum of deviations: 3145869795.9999995
[2024-06-23 10:33:28] 2024-06-23 14:33:08,312 | INFO     | mean x: 1719149100.0
[2024-06-23 10:33:28] 2024-06-23 14:33:08,312 | INFO     | mean y: 2774839.5488721803
[2024-06-23 10:33:28] 2024-06-23 14:33:08,312 | INFO     | -- intersect: -7411104154.84256
[2024-06-23 10:33:28] 2024-06-23 14:33:08,312 | INFO     | intersect: -7411104154.84256
[2024-06-23 10:33:28] 2024-06-23 14:33:08,312 | INFO     | chi2: 0.008567792587826379
[2024-06-23 10:33:28] 2024-06-23 14:33:08,313 | INFO     | current chi2=0.008567792587826379 (change=51.06173702107024 %)
[2024-06-23 10:33:28] 2024-06-23 14:33:08,313 | INFO     | model: linear, x: [1719145379.0, 1719145440.0, 1719145501.0, 1719145562.0, 1719145623.0, 1719145684.0, 1719145745.0, 1719145806.0, 1719145867.0, 1719145928.0, 1719
[2024-06-23 10:33:28] 2024-06-23 14:33:08,313 | INFO     | sum of square deviations: 650252192.0
[2024-06-23 10:33:28] 2024-06-23 14:33:08,313 | INFO     | sum of deviations: 3793037919.5
[2024-06-23 10:33:28] 2024-06-23 14:33:08,313 | INFO     | mean x: 1719149252.5
[2024-06-23 10:33:28] 2024-06-23 14:33:08,314 | INFO     | mean y: 2773659.8046875
[2024-06-23 10:33:28] 2024-06-23 14:33:08,314 | INFO     | -- intersect: -10025332949.042515
[2024-06-23 10:33:28] 2024-06-23 14:33:08,314 | INFO     | intersect: -10025332949.042515
[2024-06-23 10:33:28] 2024-06-23 14:33:08,314 | INFO     | chi2: 0.000809639269548823
[2024-06-23 10:33:28] 2024-06-23 14:33:08,314 | INFO     | current chi2=0.000809639269548823 (change=90.55019993482094 %)
[2024-06-23 10:33:28] 2024-06-23 14:33:08,314 | INFO     | model: linear, x: [1719145684.0, 1719145745.0, 1719145806.0, 1719145867.0, 1719145928.0, 1719145989.0, 1719146050.0, 1719146111.0, 1719146172.0, 1719146233.0, 1719
[2024-06-23 10:33:28] 2024-06-23 14:33:08,314 | INFO     | sum of square deviations: 576985702.0
[2024-06-23 10:33:28] 2024-06-23 14:33:08,315 | INFO     | sum of deviations: 3238806834.0
[2024-06-23 10:33:28] 2024-06-23 14:33:08,315 | INFO     | mean x: 1719149405.0
[2024-06-23 10:33:28] 2024-06-23 14:33:08,315 | INFO     | mean y: 2774812.0162601625
[2024-06-23 10:33:28] 2024-06-23 14:33:08,315 | INFO     | -- intersect: -9647365256.066456
[2024-06-23 10:33:28] 2024-06-23 14:33:08,315 | INFO     | intersect: -9647365256.066456
[2024-06-23 10:33:28] 2024-06-23 14:33:08,316 | INFO     | chi2: 0.0007749273708973407
[2024-06-23 10:33:28] 2024-06-23 14:33:08,316 | INFO     | current chi2=0.0007749273708973407 (change=4.287328932405372 %)
[2024-06-23 10:33:28] 2024-06-23 14:33:08,316 | INFO     | left removable region: 60
[2024-06-23 10:33:28] 2024-06-23 14:33:08,316 | INFO     | model: linear, x: [1719147514.0, 1719147575.0, 1719147636.0, 1719147697.0, 1719147758.0, 1719147819.0, 1719147880.0, 1719147941.0, 1719148002.0, 1719148063.0, 1719
[2024-06-23 10:33:28] 2024-06-23 14:33:08,316 | INFO     | sum of square deviations: 204163828.0
[2024-06-23 10:33:28] 2024-06-23 14:33:08,316 | INFO     | sum of deviations: 992434803.0
[2024-06-23 10:33:28] 2024-06-23 14:33:08,316 | INFO     | mean x: 1719150137.0
[2024-06-23 10:33:28] 2024-06-23 14:33:08,317 | INFO     | mean y: 2779741.2873563217
[2024-06-23 10:33:28] 2024-06-23 14:33:08,317 | INFO     | -- intersect: -8353962215.671925
[2024-06-23 10:33:28] 2024-06-23 14:33:08,317 | INFO     | intersect: -8353962215.671925
[2024-06-23 10:33:28] 2024-06-23 14:33:08,317 | INFO     | chi2: 0.00071942727427461
[2024-06-23 10:33:28] 2024-06-23 14:33:08,317 | INFO     | -- intersect: -8353962215.671925
[2024-06-23 10:33:28] 2024-06-23 14:33:08,317 | INFO     | current memory leak: 4.86 B/s (using 87 data points, chi2=0.00)
[2024-06-23 10:33:28] 2024-06-23 14:33:08,318 | INFO     | ..............................
[2024-06-23 10:33:28] 2024-06-23 14:33:08,318 | INFO     | . Timing measurements:
[2024-06-23 10:33:28] 2024-06-23 14:33:08,318 | INFO     | . get job = 0 s
[2024-06-23 10:33:28] 2024-06-23 14:33:08,318 | INFO     | . initial setup = 9 s
[2024-06-23 10:33:28] 2024-06-23 14:33:08,318 | INFO     | . payload setup = 23 s
[2024-06-23 10:33:28] 2024-06-23 14:33:08,318 | INFO     | . stage-in = 0 s
[2024-06-23 10:33:28] 2024-06-23 14:33:08,318 | INFO     | . payload execution = 9330 s
[2024-06-23 10:33:28] 2024-06-23 14:33:08,318 | INFO     | . stage-out = 0 s
[2024-06-23 10:33:28] 2024-06-23 14:33:08,318 | INFO     | . log creation = 0 s
[2024-06-23 10:33:28] 2024-06-23 14:33:08,318 | INFO     | ..............................
[2024-06-23 10:33:28] 2024-06-23 14:33:08,561 | INFO     | 
[2024-06-23 10:33:28] 2024-06-23 14:33:08,562 | INFO     | job summary report
[2024-06-23 10:33:28] 2024-06-23 14:33:08,562 | INFO     | --------------------------------------------------
[2024-06-23 10:33:28] 2024-06-23 14:33:08,562 | INFO     | PanDA job id: 6232626420
[2024-06-23 10:33:28] 2024-06-23 14:33:08,562 | INFO     | task id: 38920982
[2024-06-23 10:33:28] 2024-06-23 14:33:08,562 | INFO     | errors: (none)
[2024-06-23 10:33:28] 2024-06-23 14:33:08,562 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-23 10:33:28] 2024-06-23 14:33:08,562 | INFO     | pilot state: finished 
[2024-06-23 10:33:28] 2024-06-23 14:33:08,562 | INFO     | transexitcode: 0
[2024-06-23 10:33:28] 2024-06-23 14:33:08,562 | INFO     | exeerrorcode: 0
[2024-06-23 10:33:28] 2024-06-23 14:33:08,562 | INFO     | exeerrordiag: 
[2024-06-23 10:33:28] 2024-06-23 14:33:08,562 | INFO     | exitcode: 0
[2024-06-23 10:33:28] 2024-06-23 14:33:08,563 | INFO     | exitmsg: OK
[2024-06-23 10:33:28] 2024-06-23 14:33:08,563 | INFO     | cpuconsumptiontime: 85260 s
[2024-06-23 10:33:28] 2024-06-23 14:33:08,563 | INFO     | nevents: 400
[2024-06-23 10:33:28] 2024-06-23 14:33:08,563 | INFO     | neventsw: 0
[2024-06-23 10:33:28] 2024-06-23 14:33:08,563 | INFO     | pid: 3696092
[2024-06-23 10:33:28] 2024-06-23 14:33:08,563 | INFO     | pgrp: 3696092
[2024-06-23 10:33:28] 2024-06-23 14:33:08,563 | INFO     | corecount: 12
[2024-06-23 10:33:28] 2024-06-23 14:33:08,563 | INFO     | event service: False
[2024-06-23 10:33:28] 2024-06-23 14:33:08,563 | INFO     | sizes: {0: 2385542, 1: 2387086, 2: 2387086, 7: 2387320, 12: 2387348, 9357: 2415502, 9358: 2415629, 9359: 2424717, 9364: 2424831}
[2024-06-23 10:33:28] 2024-06-23 14:33:08,563 | INFO     | --------------------------------------------------
[2024-06-23 10:33:28] 2024-06-23 14:33:08,563 | INFO     | 
[2024-06-23 10:33:28] 2024-06-23 14:33:08,564 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/14
[2024-06-23 10:33:28] 2024-06-23 14:33:08,582 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-23 10:33:28] 2024-06-23 14:33:08,582 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-23 10:33:28] 2024-06-23 14:33:08,582 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-23 10:33:28] 2024-06-23 14:33:08,582 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-23 10:33:28] 2024-06-23 14:33:08,582 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-23 10:33:28] 2024-06-23 14:33:08,582 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-23 10:33:28] 2024-06-23 14:33:08,582 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-23 10:33:28] 2024-06-23 14:33:08,583 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-23 10:33:28] 2024-06-23 14:33:08,583 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-23 10:33:28] 2024-06-23 14:33:08,583 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-23 10:33:28] 2024-06-23 14:33:08,583 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-23 10:33:28] 2024-06-23 14:33:08,583 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-23 10:33:28] 2024-06-23 14:33:08,583 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-23 10:33:28] 2024-06-23 14:33:08,583 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-23 10:33:28] 2024-06-23 14:33:08,583 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-23 10:33:28] 2024-06-23 14:33:08,583 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-23 10:33:28] 2024-06-23 14:33:08,583 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-23 10:33:28] 2024-06-23 14:33:08,584 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-23 10:33:28] 2024-06-23 14:33:08,584 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-23 10:33:28] 2024-06-23 14:33:08,584 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-23 10:33:28] 2024-06-23 14:33:08,584 | INFO     | job 6232626420 has completed (purged errors)
[2024-06-23 10:33:28] 2024-06-23 14:33:08,584 | INFO     | overall cleanup function is called
[2024-06-23 10:33:28] 2024-06-23 14:33:08,745 | WARNING  | process 3696092 is no longer using CPU - aborting
[2024-06-23 10:33:28] 2024-06-23 14:33:08,745 | INFO     | aborting job monitoring since job object (job id=6232626420) has expired
[2024-06-23 10:33:28] 2024-06-23 14:33:09,590 | INFO     | --- collectZombieJob: --- 10, [3696092]
[2024-06-23 10:33:28] 2024-06-23 14:33:09,591 | INFO     | zombie collector waiting for pid 3696092
[2024-06-23 10:33:28] 2024-06-23 14:33:09,591 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-23 10:33:28] 2024-06-23 14:33:10,594 | INFO     | collected zombie processes
[2024-06-23 10:33:28] 2024-06-23 14:33:10,595 | INFO     | will now attempt to kill all subprocesses of pid=3696092
[2024-06-23 10:33:28] 2024-06-23 14:33:10,694 | INFO     | process IDs to be killed: [3696092] (in reverse order)
[2024-06-23 10:33:28] 2024-06-23 14:33:10,782 | WARNING  | found no corresponding commands to process id(s)
[2024-06-23 10:33:28] 2024-06-23 14:33:10,782 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-23 10:33:28] 2024-06-23 14:33:10,787 | INFO     | did not find any defunct processes belonging to 3696092
[2024-06-23 10:33:28] 2024-06-23 14:33:10,791 | INFO     | did not find any defunct processes belonging to 3696092
[2024-06-23 10:33:28] 2024-06-23 14:33:10,791 | INFO     | ready for new job
[2024-06-23 10:33:28] 2024-06-23 14:33:10,791 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-23 10:33:28] 2024-06-23 14:33:10,793 | INFO     | *************************************
[2024-06-23 10:33:28] 2024-06-23 14:33:10,793 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-23 10:33:28] 2024-06-23 14:33:10,793 | INFO     | *************************************
[2024-06-23 10:33:28] 2024-06-23 14:33:10,793 | INFO     | 
[2024-06-23 10:33:28] 2024-06-23 14:33:10,814 | INFO     | architecture information:
[2024-06-23 10:33:28] 2024-06-23 14:33:10,815 | INFO     | executing command: cat /etc/os-release
[2024-06-23 10:33:28] 2024-06-23 14:33:10,827 | INFO     | cat /etc/os-release:
[2024-06-23 10:33:28] NAME="CentOS Linux"
[2024-06-23 10:33:28] VERSION="7 (Core)"
[2024-06-23 10:33:28] ID="centos"
[2024-06-23 10:33:28] ID_LIKE="rhel fedora"
[2024-06-23 10:33:28] VERSION_ID="7"
[2024-06-23 10:33:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-23 10:33:28] ANSI_COLOR="0;31"
[2024-06-23 10:33:28] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-23 10:33:28] HOME_URL="https://www.centos.org/"
[2024-06-23 10:33:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-23 10:33:28] 
[2024-06-23 10:33:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-23 10:33:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-23 10:33:28] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-23 10:33:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-23 10:33:28] 
[2024-06-23 10:33:28] 2024-06-23 14:33:10,827 | INFO     | *************************************
[2024-06-23 10:33:28] 2024-06-23 14:33:11,330 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/14
[2024-06-23 10:33:28] 2024-06-23 14:33:11,352 | INFO     | sufficient remaining disk space (388667277312 B)
[2024-06-23 10:33:28] 2024-06-23 14:33:11,352 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-23 10:33:28] 2024-06-23 14:33:11,352 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-23 10:33:28] 2024-06-23 14:33:11,352 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-23 10:33:28] 2024-06-23 14:33:11,353 | INFO     | found 0 job(s) in 20 queues
[2024-06-23 10:33:28] 2024-06-23 14:33:11,353 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-23 10:33:28] 2024-06-23 14:33:11,353 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-23 10:33:28] 2024-06-23 14:33:11,457 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-23 10:33:28] 2024-06-23 14:33:11,606 | INFO     | all job control threads have been joined
[2024-06-23 10:33:28] 2024-06-23 14:33:11,670 | INFO     | all data control threads have been joined
[2024-06-23 10:33:28] 2024-06-23 14:33:11,762 | INFO     | all payload control threads have been joined
[2024-06-23 10:33:28] 2024-06-23 14:33:12,251 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-23 10:33:28] 2024-06-23 14:33:12,251 | INFO     | aborting loop
[2024-06-23 10:33:28] 2024-06-23 14:33:12,355 | INFO     | [job] retrieve thread has finished
[2024-06-23 10:33:28] 2024-06-23 14:33:12,511 | INFO     | [payload] validate_pre thread has finished
[2024-06-23 10:33:28] 2024-06-23 14:33:12,518 | INFO     | [data] copytool_in thread has finished
[2024-06-23 10:33:28] 2024-06-23 14:33:12,611 | INFO     | [job] control thread has finished
[2024-06-23 10:33:28] 2024-06-23 14:33:12,674 | INFO     | [data] control thread has finished
[2024-06-23 10:33:28] 2024-06-23 14:33:12,766 | INFO     | [payload] control thread has finished
[2024-06-23 10:33:28] 2024-06-23 14:33:12,782 | INFO     | [job] create_data_payload thread has finished
[2024-06-23 10:33:28] 2024-06-23 14:33:13,031 | INFO     | [job] validate thread has finished
[2024-06-23 10:33:28] 2024-06-23 14:33:13,118 | INFO     | [payload] validate_post thread has finished
[2024-06-23 10:33:28] 2024-06-23 14:33:13,254 | INFO     | [job] job monitor thread has finished
[2024-06-23 10:33:28] 2024-06-23 14:33:13,414 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-23 10:33:28] 2024-06-23 14:33:13,454 | INFO     | [payload] execute_payloads thread has finished
[2024-06-23 10:33:28] 2024-06-23 14:33:13,462 | INFO     | [data] copytool_out thread has finished
[2024-06-23 10:33:28] 2024-06-23 14:33:13,528 | INFO     | [payload] failed_post thread has finished
[2024-06-23 10:33:28] 2024-06-23 14:33:14,074 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-23 10:33:28] 2024-06-23 14:33:14,418 | INFO     | [job] queue monitor thread has finished
[2024-06-23 10:33:28] 2024-06-23 14:33:18,078 | INFO     | [data] queue_monitor thread has finished
[2024-06-23 10:33:28] 2024-06-23 14:33:21,970 | INFO     | job.realtimelogging is not enabled
[2024-06-23 10:33:28] 2024-06-23 14:33:22,974 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-23 10:33:28] 2024-06-23 14:33:23,190 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140315457451840)>', '<ExcThread(monitor, started 140314887051008)>']
[2024-06-23 10:33:28] 2024-06-23 14:33:23,402 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-23 10:33:28] 2024-06-23 14:33:23,403 | INFO     | [monitor] control thread has ended
[2024-06-23 10:33:28] 2024-06-23 14:33:28,214 | INFO     | all workflow threads have been joined
[2024-06-23 10:33:28] 2024-06-23 14:33:28,215 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-23 10:33:28] 2024-06-23 14:33:28,215 | INFO     | traces error code: 0
[2024-06-23 10:33:28] 2024-06-23 14:33:28,215 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-23 10:33:28] 2024-06-23 14:33:28,312 [wrapper] ==== pilot stdout END ====
[2024-06-23 10:33:28] 2024-06-23 14:33:28,314 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-23 10:33:28] 2024-06-23 14:33:28,316 [wrapper] pilotpid: 3686360
[2024-06-23 10:33:28] 2024-06-23 14:33:28,317 [wrapper] Pilot exit status: 0
[2024-06-23 10:33:28] 2024-06-23 14:33:28,326 [wrapper] pandaids: 6232626420
[2024-06-23 10:33:28] 2024-06-23 14:33:28,374 [wrapper] cleanup supervisor_pilot 4115546 3686361
[2024-06-23 10:33:28] 2024-06-23 14:33:28,377 [wrapper] Test setup, not cleaning
[2024-06-23 10:33:28] 2024-06-23 14:33:28,379 [wrapper] ==== wrapper stdout END ====
[2024-06-23 10:33:28] 2024-06-23 14:33:28,380 [wrapper] ==== wrapper stderr END ====
[2024-06-23 10:33:28] 2024-06-23 14:33:28,384 [wrapper] apfmon messages muted
[2024-06-23 10:33:28]  *** Error codes and diagnostics ***
[2024-06-23 10:33:28]     "exeErrorCode": 0,
[2024-06-23 10:33:28]     "exeErrorDiag": "",
[2024-06-23 10:33:28]     "pilotErrorCode": 0,
[2024-06-23 10:33:28]     "pilotErrorDiag": "",
[2024-06-23 10:33:28]  *** Listing of results directory ***
[2024-06-23 10:33:28] total 917640
[2024-06-23 10:33:28] -rw-r--r-- 1 boinc boinc    469766 Jun 16 11:19 pilot3.tar.gz
[2024-06-23 10:33:28] -rw-r--r-- 1 boinc boinc      5654 Jun 16 11:22 queuedata.json
[2024-06-23 10:33:28] -rwx------ 1 boinc boinc     32308 Jun 16 11:24 runpilot2-wrapper.sh
[2024-06-23 10:33:28] -rw-r--r-- 1 boinc boinc       100 Jun 23 07:54 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-23 10:33:28] -rwxr-xr-x 1 boinc boinc      7986 Jun 23 07:54 run_atlas
[2024-06-23 10:33:28] -rw-r--r-- 1 boinc boinc       105 Jun 23 07:54 job.xml
[2024-06-23 10:33:28] -rw-r--r-- 2 boinc boinc 631683673 Jun 23 07:54 EVNT.38776160._000399.pool.root.1
[2024-06-23 10:33:28] -rw-r--r-- 2 boinc boinc     17537 Jun 23 07:54 start_atlas.sh
[2024-06-23 10:33:28] drwxrwx--x 2 boinc boinc      4096 Jun 23 07:54 shared
[2024-06-23 10:33:28] -rw-r--r-- 2 boinc boinc    482531 Jun 23 07:54 input.tar.gz
[2024-06-23 10:33:28] -rw-r--r-- 1 boinc boinc      7599 Jun 23 07:54 init_data.xml
[2024-06-23 10:33:28] -rw-r--r-- 1 boinc boinc         0 Jun 23 07:54 boinc_lockfile
[2024-06-23 10:33:28] -rw-r--r-- 1 boinc boinc      2625 Jun 23 07:55 pandaJob.out
[2024-06-23 10:33:28] -rw------- 1 boinc boinc       460 Jun 23 07:55 setup.sh.local
[2024-06-23 10:33:28] -rw------- 1 boinc boinc   1025352 Jun 23 07:56 agis_schedconf.cvmfs.json
[2024-06-23 10:33:28] -rw------- 1 boinc boinc         0 Jun 23 07:56 agis_ddmendpoints.agis.ALL.json
[2024-06-23 10:33:28] -rw------- 1 boinc boinc   1321363 Jun 23 07:56 cric_ddmendpoints.json
[2024-06-23 10:33:28] drwx------ 4 boinc boinc      4096 Jun 23 07:56 pilot3
[2024-06-23 10:33:28] -rw-r--r-- 1 boinc boinc       531 Jun 23 10:32 boinc_task_state.xml
[2024-06-23 10:33:28] -rw------- 1 boinc boinc 301755845 Jun 23 10:32 HITS.38920982._071074.pool.root.1
[2024-06-23 10:33:28] -rw------- 1 boinc boinc        95 Jun 23 10:32 pilot_heartbeat.json
[2024-06-23 10:33:28] -rw------- 1 boinc boinc      1025 Jun 23 10:32 memory_monitor_summary.json
[2024-06-23 10:33:28] -rw------- 1 boinc boinc    400134 Jun 23 10:33 log.38920982._071074.job.log.tgz.1
[2024-06-23 10:33:28] -rw------- 1 boinc boinc      7678 Jun 23 10:33 heartbeat.json
[2024-06-23 10:33:28] -rw-r--r-- 1 boinc boinc      8192 Jun 23 10:33 boinc_mmap_file
[2024-06-23 10:33:28] -rw-r--r-- 1 boinc boinc        27 Jun 23 10:33 wrapper_checkpoint.txt
[2024-06-23 10:33:28] -rw------- 1 boinc boinc      4415 Jun 23 10:33 pilotlog.txt
[2024-06-23 10:33:28] -rw------- 1 boinc boinc    945728 Jun 23 10:33 log.38920982._071074.job.log.1
[2024-06-23 10:33:28] -rw------- 1 boinc boinc       357 Jun 23 10:33 output.list
[2024-06-23 10:33:28] -rw-r--r-- 1 boinc boinc       620 Jun 23 10:33 runtime_log
[2024-06-23 10:33:28] -rw------- 1 boinc boinc   1361920 Jun 23 10:33 result.tar.gz
[2024-06-23 10:33:28] -rw-r--r-- 1 boinc boinc     11477 Jun 23 10:33 runtime_log.err
[2024-06-23 10:33:28] -rw------- 1 boinc boinc       641 Jun 23 10:33 fh3MDmPv6c5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmoJhKDmnFIjcm.diag
[2024-06-23 10:33:28] -rw-r--r-- 1 boinc boinc     21359 Jun 23 10:33 stderr.txt
[2024-06-23 10:33:28] HITS file was successfully produced:
[2024-06-23 10:33:28] -rw------- 1 boinc boinc 301755845 Jun 23 10:32 shared/HITS.pool.root.1
[2024-06-23 10:33:28]  *** Contents of shared directory: ***
[2024-06-23 10:33:28] total 913396
[2024-06-23 10:33:28] -rw-r--r-- 2 boinc boinc 631683673 Jun 23 07:54 ATLAS.root_0
[2024-06-23 10:33:28] -rw-r--r-- 2 boinc boinc     17537 Jun 23 07:54 start_atlas.sh
[2024-06-23 10:33:28] -rw-r--r-- 2 boinc boinc    482531 Jun 23 07:54 input.tar.gz
[2024-06-23 10:33:28] -rw------- 1 boinc boinc 301755845 Jun 23 10:32 HITS.pool.root.1
[2024-06-23 10:33:28] -rw------- 1 boinc boinc   1361920 Jun 23 10:33 result.tar.gz
10:33:29 (3677497): run_atlas exited; CPU time 85088.881883
10:33:29 (3677497): called boinc_finish(0)

</stderr_txt>
]]>

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