Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
05:04:38 (2815898): wrapper (7.7.26015): starting
05:04:38 (2815898): wrapper: running run_atlas (--nthreads 12)
[2024-06-22 05:04:38] Arguments: --nthreads 12
[2024-06-22 05:04:38] Threads: 12
[2024-06-22 05:04:38] Checking for CVMFS
[2024-06-22 05:04:38] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-22 05:04:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-22 05:04:38] Running cvmfs_config stat atlas.cern.ch
[2024-06-22 05:04:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-22 05:04:39] 2.11.2.0 2238775 194 48752 134159 2 56 3312436 4194304 915 130560 0 285632 97.903 507745 1981 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.150.1:3128 1
[2024-06-22 05:04:39] CVMFS is ok
[2024-06-22 05:04:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-22 05:04:39] Checking for apptainer binary...
[2024-06-22 05:04:39] apptainer is not installed, using version from CVMFS
[2024-06-22 05:04:39] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-22 05:04:39] Trebeth
[2024-06-22 05:04:39] apptainer works
[2024-06-22 05:04:39] Set ATHENA_PROC_NUMBER=12
[2024-06-22 05:04:39] Set ATHENA_CORE_NUMBER=12
[2024-06-22 05:04:39] Starting ATLAS job with PandaID=6231708284
[2024-06-22 05:04:39] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-22 09:52:38]  *** The last 200 lines of the pilot log: ***
[2024-06-22 09:52:38] 2024-06-22 13:52:24,394 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-22 09:52:38] 2024-06-22 13:52:24,394 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-22 09:52:38] 2024-06-22 13:52:24,399 | INFO     | fitting pss+swap vs Time
[2024-06-22 09:52:38] 2024-06-22 13:52:24,400 | INFO     | model: linear, x: [1719047110.0, 1719047171.0, 1719047232.0, 1719047293.0, 1719047354.0, 1719047415.0, 1719047476.0, 1719047537.0, 1719047598.0, 1719047659.0, 1719
[2024-06-22 09:52:38] 2024-06-22 13:52:24,400 | INFO     | sum of square deviations: 7028008982.0
[2024-06-22 09:52:38] 2024-06-22 13:52:24,402 | INFO     | sum of deviations: 100107792472.00002
[2024-06-22 09:52:38] 2024-06-22 13:52:24,402 | INFO     | mean x: 1719055711.0
[2024-06-22 09:52:38] 2024-06-22 13:52:24,402 | INFO     | mean y: 2710869.2084805653
[2024-06-22 09:52:38] 2024-06-22 13:52:24,403 | INFO     | -- intersect: -24483722316.257023
[2024-06-22 09:52:38] 2024-06-22 13:52:24,403 | INFO     | intersect: -24483722316.257023
[2024-06-22 09:52:38] 2024-06-22 13:52:24,403 | INFO     | chi2: 3.1832133549345616
[2024-06-22 09:52:38] 2024-06-22 13:52:24,404 | INFO     | model: linear, x: [1719047110.0, 1719047171.0, 1719047232.0, 1719047293.0, 1719047354.0, 1719047415.0, 1719047476.0, 1719047537.0, 1719047598.0, 1719047659.0, 1719
[2024-06-22 09:52:38] 2024-06-22 13:52:24,404 | INFO     | sum of square deviations: 6662039329.5
[2024-06-22 09:52:38] 2024-06-22 13:52:24,406 | INFO     | sum of deviations: 117556452712.5
[2024-06-22 09:52:38] 2024-06-22 13:52:24,406 | INFO     | mean x: 1719055558.5
[2024-06-22 09:52:38] 2024-06-22 13:52:24,406 | INFO     | mean y: 2718021.5
[2024-06-22 09:52:38] 2024-06-22 13:52:24,406 | INFO     | -- intersect: -30331247822.579235
[2024-06-22 09:52:38] 2024-06-22 13:52:24,406 | INFO     | intersect: -30331247822.579235
[2024-06-22 09:52:38] 2024-06-22 13:52:24,407 | INFO     | chi2: 2.481299748484712
[2024-06-22 09:52:38] 2024-06-22 13:52:24,407 | INFO     | current chi2=2.481299748484712 (change=22.050473159826232 %)
[2024-06-22 09:52:38] 2024-06-22 13:52:24,407 | INFO     | right removable region: 277
[2024-06-22 09:52:38] 2024-06-22 13:52:24,407 | INFO     | model: linear, x: [1719047415.0, 1719047476.0, 1719047537.0, 1719047598.0, 1719047659.0, 1719047720.0, 1719047781.0, 1719047842.0, 1719047903.0, 1719047964.0, 1719
[2024-06-22 09:52:38] 2024-06-22 13:52:24,408 | INFO     | sum of square deviations: 6662039329.5
[2024-06-22 09:52:38] 2024-06-22 13:52:24,410 | INFO     | sum of deviations: 27374213325.500008
[2024-06-22 09:52:38] 2024-06-22 13:52:24,410 | INFO     | mean x: 1719055863.5
[2024-06-22 09:52:38] 2024-06-22 13:52:24,410 | INFO     | mean y: 2741105.190647482
[2024-06-22 09:52:38] 2024-06-22 13:52:24,410 | INFO     | -- intersect: -7060832013.857933
[2024-06-22 09:52:38] 2024-06-22 13:52:24,410 | INFO     | intersect: -7060832013.857933
[2024-06-22 09:52:38] 2024-06-22 13:52:24,410 | INFO     | chi2: 1.0453737445860416
[2024-06-22 09:52:38] 2024-06-22 13:52:24,411 | INFO     | current chi2=1.0453737445860416 (change=67.15979646901388 %)
[2024-06-22 09:52:38] 2024-06-22 13:52:24,411 | INFO     | model: linear, x: [1719047720.0, 1719047781.0, 1719047842.0, 1719047903.0, 1719047964.0, 1719048025.0, 1719048086.0, 1719048147.0, 1719048208.0, 1719048269.0, 1719
[2024-06-22 09:52:38] 2024-06-22 13:52:24,411 | INFO     | sum of square deviations: 6309000152.0
[2024-06-22 09:52:38] 2024-06-22 13:52:24,413 | INFO     | sum of deviations: 4647874321.0
[2024-06-22 09:52:38] 2024-06-22 13:52:24,413 | INFO     | mean x: 1719056016.0
[2024-06-22 09:52:38] 2024-06-22 13:52:24,413 | INFO     | mean y: 2750850.6666666665
[2024-06-22 09:52:38] 2024-06-22 13:52:24,413 | INFO     | -- intersect: -1263686955.7413883
[2024-06-22 09:52:38] 2024-06-22 13:52:24,414 | INFO     | intersect: -1263686955.7413883
[2024-06-22 09:52:38] 2024-06-22 13:52:24,414 | INFO     | chi2: 0.7476571291250415
[2024-06-22 09:52:38] 2024-06-22 13:52:24,414 | INFO     | current chi2=0.7476571291250415 (change=28.47944259197874 %)
[2024-06-22 09:52:38] 2024-06-22 13:52:24,415 | INFO     | model: linear, x: [1719048025.0, 1719048086.0, 1719048147.0, 1719048208.0, 1719048269.0, 1719048330.0, 1719048391.0, 1719048452.0, 1719048513.0, 1719048574.0, 1719
[2024-06-22 09:52:38] 2024-06-22 13:52:24,415 | INFO     | sum of square deviations: 5968658887.0
[2024-06-22 09:52:38] 2024-06-22 13:52:24,417 | INFO     | sum of deviations: 1080634825.0
[2024-06-22 09:52:38] 2024-06-22 13:52:24,417 | INFO     | mean x: 1719056168.5
[2024-06-22 09:52:38] 2024-06-22 13:52:24,417 | INFO     | mean y: 2752436.149253731
[2024-06-22 09:52:38] 2024-06-22 13:52:24,417 | INFO     | -- intersect: -308485313.7342685
[2024-06-22 09:52:38] 2024-06-22 13:52:24,417 | INFO     | intersect: -308485313.7342685
[2024-06-22 09:52:38] 2024-06-22 13:52:24,418 | INFO     | chi2: 0.7242640260842856
[2024-06-22 09:52:38] 2024-06-22 13:52:24,418 | INFO     | current chi2=0.7242640260842856 (change=3.1288544079198433 %)
[2024-06-22 09:52:38] 2024-06-22 13:52:24,418 | INFO     | left removable region: 30
[2024-06-22 09:52:38] 2024-06-22 13:52:24,418 | INFO     | model: linear, x: [1719048940.0, 1719049001.0, 1719049062.0, 1719049123.0, 1719049184.0, 1719049245.0, 1719049306.0, 1719049367.0, 1719049428.0, 1719049489.0, 1719
[2024-06-22 09:52:38] 2024-06-22 13:52:24,418 | INFO     | sum of square deviations: 4672638308.0
[2024-06-22 09:52:38] 2024-06-22 13:52:24,420 | INFO     | sum of deviations: 12547008076.999996
[2024-06-22 09:52:38] 2024-06-22 13:52:24,420 | INFO     | mean x: 1719056443.0
[2024-06-22 09:52:38] 2024-06-22 13:52:24,420 | INFO     | mean y: 2763986.825910931
[2024-06-22 09:52:38] 2024-06-22 13:52:24,421 | INFO     | -- intersect: -4613260976.675262
[2024-06-22 09:52:38] 2024-06-22 13:52:24,421 | INFO     | intersect: -4613260976.675262
[2024-06-22 09:52:38] 2024-06-22 13:52:24,421 | INFO     | chi2: 0.00107154113160475
[2024-06-22 09:52:38] 2024-06-22 13:52:24,421 | INFO     | -- intersect: -4613260976.675262
[2024-06-22 09:52:38] 2024-06-22 13:52:24,421 | INFO     | current memory leak: 2.69 B/s (using 247 data points, chi2=0.00)
[2024-06-22 09:52:38] 2024-06-22 13:52:24,422 | INFO     | ..............................
[2024-06-22 09:52:38] 2024-06-22 13:52:24,422 | INFO     | . Timing measurements:
[2024-06-22 09:52:38] 2024-06-22 13:52:24,422 | INFO     | . get job = 0 s
[2024-06-22 09:52:38] 2024-06-22 13:52:24,422 | INFO     | . initial setup = 2 s
[2024-06-22 09:52:38] 2024-06-22 13:52:24,422 | INFO     | . payload setup = 4 s
[2024-06-22 09:52:38] 2024-06-22 13:52:24,423 | INFO     | . stage-in = 0 s
[2024-06-22 09:52:38] 2024-06-22 13:52:24,423 | INFO     | . payload execution = 17224 s
[2024-06-22 09:52:38] 2024-06-22 13:52:24,423 | INFO     | . stage-out = 1 s
[2024-06-22 09:52:38] 2024-06-22 13:52:24,423 | INFO     | . log creation = 0 s
[2024-06-22 09:52:38] 2024-06-22 13:52:24,423 | INFO     | ..............................
[2024-06-22 09:52:38] 2024-06-22 13:52:24,519 | INFO     | 
[2024-06-22 09:52:38] 2024-06-22 13:52:24,519 | INFO     | job summary report
[2024-06-22 09:52:38] 2024-06-22 13:52:24,519 | INFO     | --------------------------------------------------
[2024-06-22 09:52:38] 2024-06-22 13:52:24,519 | INFO     | PanDA job id: 6231708284
[2024-06-22 09:52:38] 2024-06-22 13:52:24,519 | INFO     | task id: 38921007
[2024-06-22 09:52:38] 2024-06-22 13:52:24,519 | INFO     | errors: (none)
[2024-06-22 09:52:38] 2024-06-22 13:52:24,519 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-22 09:52:38] 2024-06-22 13:52:24,519 | INFO     | pilot state: finished 
[2024-06-22 09:52:38] 2024-06-22 13:52:24,520 | INFO     | transexitcode: 0
[2024-06-22 09:52:38] 2024-06-22 13:52:24,520 | INFO     | exeerrorcode: 0
[2024-06-22 09:52:38] 2024-06-22 13:52:24,520 | INFO     | exeerrordiag: 
[2024-06-22 09:52:38] 2024-06-22 13:52:24,520 | INFO     | exitcode: 0
[2024-06-22 09:52:38] 2024-06-22 13:52:24,520 | INFO     | exitmsg: OK
[2024-06-22 09:52:38] 2024-06-22 13:52:24,520 | INFO     | cpuconsumptiontime: 144334 s
[2024-06-22 09:52:38] 2024-06-22 13:52:24,520 | INFO     | nevents: 400
[2024-06-22 09:52:38] 2024-06-22 13:52:24,520 | INFO     | neventsw: 0
[2024-06-22 09:52:38] 2024-06-22 13:52:24,520 | INFO     | pid: 2828137
[2024-06-22 09:52:38] 2024-06-22 13:52:24,520 | INFO     | pgrp: 2828137
[2024-06-22 09:52:38] 2024-06-22 13:52:24,520 | INFO     | corecount: 12
[2024-06-22 09:52:38] 2024-06-22 13:52:24,521 | INFO     | event service: False
[2024-06-22 09:52:38] 2024-06-22 13:52:24,521 | INFO     | sizes: {0: 2386947, 1: 2387146, 4: 2387352, 11: 2387380, 17231: 2419354, 17233: 2428330, 17236: 2428514, 17242: 2428684}
[2024-06-22 09:52:38] 2024-06-22 13:52:24,521 | INFO     | --------------------------------------------------
[2024-06-22 09:52:38] 2024-06-22 13:52:24,521 | INFO     | 
[2024-06-22 09:52:38] 2024-06-22 13:52:24,521 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/12
[2024-06-22 09:52:38] 2024-06-22 13:52:24,538 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-22 09:52:38] 2024-06-22 13:52:24,538 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-22 09:52:38] 2024-06-22 13:52:24,538 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-22 09:52:38] 2024-06-22 13:52:24,538 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-22 09:52:38] 2024-06-22 13:52:24,538 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-22 09:52:38] 2024-06-22 13:52:24,539 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-22 09:52:38] 2024-06-22 13:52:24,539 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-22 09:52:38] 2024-06-22 13:52:24,539 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-22 09:52:38] 2024-06-22 13:52:24,539 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-22 09:52:38] 2024-06-22 13:52:24,539 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-22 09:52:38] 2024-06-22 13:52:24,539 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-22 09:52:38] 2024-06-22 13:52:24,539 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-22 09:52:38] 2024-06-22 13:52:24,539 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-22 09:52:38] 2024-06-22 13:52:24,539 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-22 09:52:38] 2024-06-22 13:52:24,539 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-22 09:52:38] 2024-06-22 13:52:24,540 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-22 09:52:38] 2024-06-22 13:52:24,540 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-22 09:52:38] 2024-06-22 13:52:24,540 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-22 09:52:38] 2024-06-22 13:52:24,540 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-22 09:52:38] 2024-06-22 13:52:24,540 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-22 09:52:38] 2024-06-22 13:52:24,540 | INFO     | job 6231708284 has completed (purged errors)
[2024-06-22 09:52:38] 2024-06-22 13:52:24,540 | INFO     | overall cleanup function is called
[2024-06-22 09:52:38] 2024-06-22 13:52:25,548 | INFO     | --- collectZombieJob: --- 10, [2828137]
[2024-06-22 09:52:38] 2024-06-22 13:52:25,548 | INFO     | zombie collector waiting for pid 2828137
[2024-06-22 09:52:38] 2024-06-22 13:52:25,548 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-22 09:52:38] 2024-06-22 13:52:26,550 | INFO     | collected zombie processes
[2024-06-22 09:52:38] 2024-06-22 13:52:26,551 | INFO     | will now attempt to kill all subprocesses of pid=2828137
[2024-06-22 09:52:38] 2024-06-22 13:52:26,661 | INFO     | process IDs to be killed: [2828137] (in reverse order)
[2024-06-22 09:52:38] 2024-06-22 13:52:26,757 | WARNING  | found no corresponding commands to process id(s)
[2024-06-22 09:52:38] 2024-06-22 13:52:26,757 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-22 09:52:38] 2024-06-22 13:52:26,765 | INFO     | did not find any defunct processes belonging to 2828137
[2024-06-22 09:52:38] 2024-06-22 13:52:26,772 | INFO     | did not find any defunct processes belonging to 2828137
[2024-06-22 09:52:38] 2024-06-22 13:52:26,772 | INFO     | ready for new job
[2024-06-22 09:52:38] 2024-06-22 13:52:26,773 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-22 09:52:38] 2024-06-22 13:52:26,774 | INFO     | *************************************
[2024-06-22 09:52:38] 2024-06-22 13:52:26,775 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-22 09:52:38] 2024-06-22 13:52:26,775 | INFO     | *************************************
[2024-06-22 09:52:38] 2024-06-22 13:52:26,775 | INFO     | 
[2024-06-22 09:52:38] 2024-06-22 13:52:26,798 | INFO     | architecture information:
[2024-06-22 09:52:38] 2024-06-22 13:52:26,798 | INFO     | executing command: cat /etc/os-release
[2024-06-22 09:52:38] 2024-06-22 13:52:26,814 | INFO     | cat /etc/os-release:
[2024-06-22 09:52:38] NAME="CentOS Linux"
[2024-06-22 09:52:38] VERSION="7 (Core)"
[2024-06-22 09:52:38] ID="centos"
[2024-06-22 09:52:38] ID_LIKE="rhel fedora"
[2024-06-22 09:52:38] VERSION_ID="7"
[2024-06-22 09:52:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-22 09:52:38] ANSI_COLOR="0;31"
[2024-06-22 09:52:38] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-22 09:52:38] HOME_URL="https://www.centos.org/"
[2024-06-22 09:52:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-22 09:52:38] 
[2024-06-22 09:52:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-22 09:52:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-22 09:52:38] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-22 09:52:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-22 09:52:38] 
[2024-06-22 09:52:38] 2024-06-22 13:52:26,815 | INFO     | *************************************
[2024-06-22 09:52:38] 2024-06-22 13:52:27,318 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/12
[2024-06-22 09:52:38] 2024-06-22 13:52:27,333 | INFO     | sufficient remaining disk space (387336634368 B)
[2024-06-22 09:52:38] 2024-06-22 13:52:27,333 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-22 09:52:38] 2024-06-22 13:52:27,333 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-22 09:52:38] 2024-06-22 13:52:27,333 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-22 09:52:38] 2024-06-22 13:52:27,333 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-22 09:52:38] 2024-06-22 13:52:27,334 | INFO     | aborting loop
[2024-06-22 09:52:38] 2024-06-22 13:52:27,334 | INFO     | found 0 job(s) in 20 queues
[2024-06-22 09:52:38] 2024-06-22 13:52:27,334 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-22 09:52:38] 2024-06-22 13:52:27,335 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-22 09:52:38] 2024-06-22 13:52:27,614 | INFO     | all data control threads have been joined
[2024-06-22 09:52:38] 2024-06-22 13:52:27,971 | INFO     | all payload control threads have been joined
[2024-06-22 09:52:38] 2024-06-22 13:52:28,322 | INFO     | all job control threads have been joined
[2024-06-22 09:52:38] 2024-06-22 13:52:28,335 | INFO     | [job] retrieve thread has finished
[2024-06-22 09:52:38] 2024-06-22 13:52:28,338 | INFO     | [job] job monitor thread has finished
[2024-06-22 09:52:38] 2024-06-22 13:52:28,339 | INFO     | [job] create_data_payload thread has finished
[2024-06-22 09:52:38] 2024-06-22 13:52:28,341 | INFO     | [job] validate thread has finished
[2024-06-22 09:52:38] 2024-06-22 13:52:28,398 | INFO     | [payload] execute_payloads thread has finished
[2024-06-22 09:52:38] 2024-06-22 13:52:28,618 | INFO     | [data] control thread has finished
[2024-06-22 09:52:38] 2024-06-22 13:52:28,790 | INFO     | [payload] validate_pre thread has finished
[2024-06-22 09:52:38] 2024-06-22 13:52:28,830 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-22 09:52:38] 2024-06-22 13:52:28,906 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-22 09:52:38] 2024-06-22 13:52:28,933 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-22 09:52:38] 2024-06-22 13:52:28,974 | INFO     | [payload] control thread has finished
[2024-06-22 09:52:38] 2024-06-22 13:52:29,326 | INFO     | [job] control thread has finished
[2024-06-22 09:52:38] 2024-06-22 13:52:29,498 | INFO     | [payload] validate_post thread has finished
[2024-06-22 09:52:38] 2024-06-22 13:52:29,526 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-22 09:52:38] 2024-06-22 13:52:29,796 | INFO     | [data] copytool_in thread has finished
[2024-06-22 09:52:38] 2024-06-22 13:52:29,902 | INFO     | [payload] failed_post thread has finished
[2024-06-22 09:52:38] 2024-06-22 13:52:30,530 | INFO     | [job] queue monitor thread has finished
[2024-06-22 09:52:38] 2024-06-22 13:52:30,834 | INFO     | [data] copytool_out thread has finished
[2024-06-22 09:52:38] 2024-06-22 13:52:32,938 | INFO     | [data] queue_monitor thread has finished
[2024-06-22 09:52:38] 2024-06-22 13:52:33,451 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140041320073024)>', '<ExcThread(monitor, started 140040889952000)>']
[2024-06-22 09:52:38] 2024-06-22 13:52:34,362 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-22 09:52:38] 2024-06-22 13:52:34,363 | INFO     | [monitor] control thread has ended
[2024-06-22 09:52:38] 2024-06-22 13:52:38,474 | INFO     | all workflow threads have been joined
[2024-06-22 09:52:38] 2024-06-22 13:52:38,475 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-22 09:52:38] 2024-06-22 13:52:38,475 | INFO     | traces error code: 0
[2024-06-22 09:52:38] 2024-06-22 13:52:38,475 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-22 09:52:38] 2024-06-22 13:52:38,583 [wrapper] ==== pilot stdout END ====
[2024-06-22 09:52:38] 2024-06-22 13:52:38,586 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-22 09:52:38] 2024-06-22 13:52:38,587 [wrapper] pilotpid: 2820591
[2024-06-22 09:52:38] 2024-06-22 13:52:38,589 [wrapper] Pilot exit status: 0
[2024-06-22 09:52:38] 2024-06-22 13:52:38,598 [wrapper] pandaids: 6231708284
[2024-06-22 09:52:38] 2024-06-22 13:52:38,649 [wrapper] cleanup supervisor_pilot 3686969 2820592
[2024-06-22 09:52:38] 2024-06-22 13:52:38,651 [wrapper] Test setup, not cleaning
[2024-06-22 09:52:38] 2024-06-22 13:52:38,653 [wrapper] ==== wrapper stdout END ====
[2024-06-22 09:52:38] 2024-06-22 13:52:38,655 [wrapper] ==== wrapper stderr END ====
[2024-06-22 09:52:38] 2024-06-22 13:52:38,658 [wrapper] apfmon messages muted
[2024-06-22 09:52:38]  *** Error codes and diagnostics ***
[2024-06-22 09:52:38]     "exeErrorCode": 0,
[2024-06-22 09:52:38]     "exeErrorDiag": "",
[2024-06-22 09:52:38]     "pilotErrorCode": 0,
[2024-06-22 09:52:38]     "pilotErrorDiag": "",
[2024-06-22 09:52:38]  *** Listing of results directory ***
[2024-06-22 09:52:38] total 924160
[2024-06-22 09:52:38] -rw-r--r-- 1 boinc boinc      5654 Jun 15 18:26 queuedata.json
[2024-06-22 09:52:38] -rwx------ 1 boinc boinc     32308 Jun 15 18:27 runpilot2-wrapper.sh
[2024-06-22 09:52:38] -rw-r--r-- 1 boinc boinc    469766 Jun 15 18:27 pilot3.tar.gz
[2024-06-22 09:52:38] -rw-r--r-- 1 boinc boinc       100 Jun 22 05:04 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-22 09:52:38] -rwxr-xr-x 1 boinc boinc      7986 Jun 22 05:04 run_atlas
[2024-06-22 09:52:38] -rw-r--r-- 1 boinc boinc       105 Jun 22 05:04 job.xml
[2024-06-22 09:52:38] -rw-r--r-- 2 boinc boinc     17537 Jun 22 05:04 start_atlas.sh
[2024-06-22 09:52:38] drwxrwx--x 2 boinc boinc      4096 Jun 22 05:04 shared
[2024-06-22 09:52:38] -rw-r--r-- 2 boinc boinc    482531 Jun 22 05:04 input.tar.gz
[2024-06-22 09:52:38] -rw-r--r-- 1 boinc boinc      7599 Jun 22 05:04 init_data.xml
[2024-06-22 09:52:38] -rw-r--r-- 2 boinc boinc 585242659 Jun 22 05:04 EVNT.38776201._000969.pool.root.1
[2024-06-22 09:52:38] -rw-r--r-- 1 boinc boinc         0 Jun 22 05:04 boinc_lockfile
[2024-06-22 09:52:38] -rw-r--r-- 1 boinc boinc      2632 Jun 22 05:04 pandaJob.out
[2024-06-22 09:52:38] -rw------- 1 boinc boinc       460 Jun 22 05:04 setup.sh.local
[2024-06-22 09:52:38] -rw------- 1 boinc boinc   1025969 Jun 22 05:04 agis_schedconf.cvmfs.json
[2024-06-22 09:52:38] -rw------- 1 boinc boinc   1321363 Jun 22 05:04 cric_ddmendpoints.json
[2024-06-22 09:52:38] drwx------ 4 boinc boinc      4096 Jun 22 05:04 pilot3
[2024-06-22 09:52:38] -rw------- 1 boinc boinc 352969118 Jun 22 09:51 HITS.38921007._043572.pool.root.1
[2024-06-22 09:52:38] -rw-r--r-- 1 boinc boinc       533 Jun 22 09:51 boinc_task_state.xml
[2024-06-22 09:52:38] -rw------- 1 boinc boinc        95 Jun 22 09:51 pilot_heartbeat.json
[2024-06-22 09:52:38] -rw------- 1 boinc boinc      1029 Jun 22 09:52 memory_monitor_summary.json
[2024-06-22 09:52:38] -rw------- 1 boinc boinc         0 Jun 22 09:52 agis_ddmendpoints.agis.ALL.json
[2024-06-22 09:52:38] -rw------- 1 boinc boinc    485277 Jun 22 09:52 log.38921007._043572.job.log.tgz.1
[2024-06-22 09:52:38] -rw------- 1 boinc boinc      7695 Jun 22 09:52 heartbeat.json
[2024-06-22 09:52:38] -rw-r--r-- 1 boinc boinc      8192 Jun 22 09:52 boinc_mmap_file
[2024-06-22 09:52:38] -rw-r--r-- 1 boinc boinc        29 Jun 22 09:52 wrapper_checkpoint.txt
[2024-06-22 09:52:38] -rw------- 1 boinc boinc      4343 Jun 22 09:52 pilotlog.txt
[2024-06-22 09:52:38] -rw------- 1 boinc boinc   1809920 Jun 22 09:52 log.38921007._043572.job.log.1
[2024-06-22 09:52:38] -rw------- 1 boinc boinc       357 Jun 22 09:52 output.list
[2024-06-22 09:52:38] -rw-r--r-- 1 boinc boinc       620 Jun 22 09:52 runtime_log
[2024-06-22 09:52:38] -rw------- 1 boinc boinc   2314240 Jun 22 09:52 result.tar.gz
[2024-06-22 09:52:38] -rw------- 1 boinc boinc       644 Jun 22 09:52 vN1LDmn2qc5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmcoUKDmd5aWim.diag
[2024-06-22 09:52:38] -rw-r--r-- 1 boinc boinc     11478 Jun 22 09:52 runtime_log.err
[2024-06-22 09:52:38] -rw-r--r-- 1 boinc boinc     21275 Jun 22 09:52 stderr.txt
[2024-06-22 09:52:38] HITS file was successfully produced:
[2024-06-22 09:52:38] -rw------- 1 boinc boinc 352969118 Jun 22 09:51 shared/HITS.pool.root.1
[2024-06-22 09:52:38]  *** Contents of shared directory: ***
[2024-06-22 09:52:38] total 918988
[2024-06-22 09:52:38] -rw-r--r-- 2 boinc boinc     17537 Jun 22 05:04 start_atlas.sh
[2024-06-22 09:52:38] -rw-r--r-- 2 boinc boinc    482531 Jun 22 05:04 input.tar.gz
[2024-06-22 09:52:38] -rw-r--r-- 2 boinc boinc 585242659 Jun 22 05:04 ATLAS.root_0
[2024-06-22 09:52:38] -rw------- 1 boinc boinc 352969118 Jun 22 09:51 HITS.pool.root.1
[2024-06-22 09:52:38] -rw------- 1 boinc boinc   2314240 Jun 22 09:52 result.tar.gz
09:52:40 (2815898): run_atlas exited; CPU time 143809.501778
09:52:40 (2815898): called boinc_finish(0)

</stderr_txt>
]]>

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