Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
18:21:38 (1181452): wrapper (7.7.26015): starting
18:21:38 (1181452): wrapper: running run_atlas (--nthreads 12)
[2024-06-22 18:21:38] Arguments: --nthreads 12
[2024-06-22 18:21:38] Threads: 12
[2024-06-22 18:21:38] Checking for CVMFS
[2024-06-22 18:21:38] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-22 18:21:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-22 18:21:38] Running cvmfs_config stat atlas.cern.ch
[2024-06-22 18:21:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-22 18:21:38] 2.11.2.0 2238775 991 56620 134182 3 55 3741371 4194305 915 130560 0 1277624 99.319 843312 2531 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.150.1:3128 1
[2024-06-22 18:21:38] CVMFS is ok
[2024-06-22 18:21:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-22 18:21:38] Checking for apptainer binary...
[2024-06-22 18:21:38] apptainer is not installed, using version from CVMFS
[2024-06-22 18:21:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-22 18:21:39] Trebeth
[2024-06-22 18:21:39] apptainer works
[2024-06-22 18:21:39] Set ATHENA_PROC_NUMBER=12
[2024-06-22 18:21:39] Set ATHENA_CORE_NUMBER=12
[2024-06-22 18:21:39] Starting ATLAS job with PandaID=6231689699
[2024-06-22 18:21:39] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-22 22:41:06]  *** The last 200 lines of the pilot log: ***
[2024-06-22 22:41:06] 2024-06-23 02:40:45,326 | INFO     | model: linear, x: [1719094939.0, 1719095000.0, 1719095061.0, 1719095122.0, 1719095183.0, 1719095244.0, 1719095305.0, 1719095366.0, 1719095427.0, 1719095488.0, 1719
[2024-06-22 22:41:06] 2024-06-23 02:40:45,326 | INFO     | sum of square deviations: 5081276667.5
[2024-06-22 22:41:06] 2024-06-23 02:40:45,328 | INFO     | sum of deviations: 4146490402.499977
[2024-06-22 22:41:06] 2024-06-23 02:40:45,328 | INFO     | mean x: 1719102655.5
[2024-06-22 22:41:06] 2024-06-23 02:40:45,328 | INFO     | mean y: 2780473.562992126
[2024-06-22 22:41:06] 2024-06-23 02:40:45,328 | INFO     | -- intersect: -1400064348.3959126
[2024-06-22 22:41:06] 2024-06-23 02:40:45,328 | INFO     | intersect: -1400064348.3959126
[2024-06-22 22:41:06] 2024-06-23 02:40:45,329 | INFO     | chi2: 3.982357239383937
[2024-06-22 22:41:06] 2024-06-23 02:40:45,329 | INFO     | model: linear, x: [1719094939.0, 1719095000.0, 1719095061.0, 1719095122.0, 1719095183.0, 1719095244.0, 1719095305.0, 1719095366.0, 1719095427.0, 1719095488.0, 1719
[2024-06-22 22:41:06] 2024-06-23 02:40:45,329 | INFO     | sum of square deviations: 4787066500.0
[2024-06-22 22:41:06] 2024-06-23 02:40:45,331 | INFO     | sum of deviations: 22653893787.999996
[2024-06-22 22:41:06] 2024-06-23 02:40:45,331 | INFO     | mean x: 1719102503.0
[2024-06-22 22:41:06] 2024-06-23 02:40:45,331 | INFO     | mean y: 2789918.112449799
[2024-06-22 22:41:06] 2024-06-23 02:40:45,331 | INFO     | -- intersect: -8132540040.986081
[2024-06-22 22:41:06] 2024-06-23 02:40:45,331 | INFO     | intersect: -8132540040.986081
[2024-06-22 22:41:06] 2024-06-23 02:40:45,331 | INFO     | chi2: 3.2875433539726604
[2024-06-22 22:41:06] 2024-06-23 02:40:45,331 | INFO     | current chi2=3.2875433539726604 (change=17.447301777445837 %)
[2024-06-22 22:41:06] 2024-06-23 02:40:45,332 | INFO     | right removable region: 248
[2024-06-22 22:41:06] 2024-06-23 02:40:45,332 | INFO     | model: linear, x: [1719095244.0, 1719095305.0, 1719095366.0, 1719095427.0, 1719095488.0, 1719095549.0, 1719095610.0, 1719095671.0, 1719095732.0, 1719095793.0, 1719
[2024-06-22 22:41:06] 2024-06-23 02:40:45,332 | INFO     | sum of square deviations: 4787066500.0
[2024-06-22 22:41:06] 2024-06-23 02:40:45,333 | INFO     | sum of deviations: -64065048944.0
[2024-06-22 22:41:06] 2024-06-23 02:40:45,333 | INFO     | mean x: 1719102808.0
[2024-06-22 22:41:06] 2024-06-23 02:40:45,334 | INFO     | mean y: 2815742.0
[2024-06-22 22:41:06] 2024-06-23 02:40:45,334 | INFO     | -- intersect: 23009474524.42716
[2024-06-22 22:41:06] 2024-06-23 02:40:45,334 | INFO     | intersect: 23009474524.42716
[2024-06-22 22:41:06] 2024-06-23 02:40:45,334 | INFO     | chi2: 1.6101278993577415
[2024-06-22 22:41:06] 2024-06-23 02:40:45,334 | INFO     | current chi2=1.6101278993577415 (change=59.568471571705985 %)
[2024-06-22 22:41:06] 2024-06-23 02:40:45,335 | INFO     | model: linear, x: [1719095549.0, 1719095610.0, 1719095671.0, 1719095732.0, 1719095793.0, 1719095854.0, 1719095915.0, 1719095976.0, 1719096037.0, 1719096098.0, 1719
[2024-06-22 22:41:06] 2024-06-23 02:40:45,335 | INFO     | sum of square deviations: 4504437945.0
[2024-06-22 22:41:06] 2024-06-23 02:40:45,336 | INFO     | sum of deviations: -87704435277.50002
[2024-06-22 22:41:06] 2024-06-23 02:40:45,336 | INFO     | mean x: 1719102960.5
[2024-06-22 22:41:06] 2024-06-23 02:40:45,336 | INFO     | mean y: 2828408.62704918
[2024-06-22 22:41:06] 2024-06-23 02:40:45,336 | INFO     | -- intersect: 33474918861.530586
[2024-06-22 22:41:06] 2024-06-23 02:40:45,336 | INFO     | intersect: 33474918861.530586
[2024-06-22 22:41:06] 2024-06-23 02:40:45,337 | INFO     | chi2: 1.1785003063181099
[2024-06-22 22:41:06] 2024-06-23 02:40:45,337 | INFO     | current chi2=1.1785003063181099 (change=26.80703770252053 %)
[2024-06-22 22:41:06] 2024-06-23 02:40:45,337 | INFO     | model: linear, x: [1719095854.0, 1719095915.0, 1719095976.0, 1719096037.0, 1719096098.0, 1719096159.0, 1719096220.0, 1719096281.0, 1719096342.0, 1719096403.0, 1719
[2024-06-22 22:41:06] 2024-06-23 02:40:45,337 | INFO     | sum of square deviations: 4233158440.0
[2024-06-22 22:41:06] 2024-06-23 02:40:45,339 | INFO     | sum of deviations: -97178642378.0
[2024-06-22 22:41:06] 2024-06-23 02:40:45,339 | INFO     | mean x: 1719103113.0
[2024-06-22 22:41:06] 2024-06-23 02:40:45,339 | INFO     | mean y: 2833735.0376569037
[2024-06-22 22:41:06] 2024-06-23 02:40:45,339 | INFO     | -- intersect: 39467481467.22448
[2024-06-22 22:41:06] 2024-06-23 02:40:45,339 | INFO     | intersect: 39467481467.22448
[2024-06-22 22:41:06] 2024-06-23 02:40:45,340 | INFO     | chi2: 1.0873512777525254
[2024-06-22 22:41:06] 2024-06-23 02:40:45,340 | INFO     | current chi2=1.0873512777525254 (change=7.734323705893111 %)
[2024-06-22 22:41:06] 2024-06-23 02:40:45,340 | INFO     | left removable region: 30
[2024-06-22 22:41:06] 2024-06-23 02:40:45,340 | INFO     | model: linear, x: [1719096769.0, 1719096830.0, 1719096891.0, 1719096952.0, 1719097013.0, 1719097074.0, 1719097135.0, 1719097196.0, 1719097257.0, 1719097318.0, 1719
[2024-06-22 22:41:06] 2024-06-23 02:40:45,340 | INFO     | sum of square deviations: 3212467674.5
[2024-06-22 22:41:06] 2024-06-23 02:40:45,341 | INFO     | sum of deviations: -54170425146.50002
[2024-06-22 22:41:06] 2024-06-23 02:40:45,342 | INFO     | mean x: 1719103387.5
[2024-06-22 22:41:06] 2024-06-23 02:40:45,342 | INFO     | mean y: 2829969.729357798
[2024-06-22 22:41:06] 2024-06-23 02:40:45,342 | INFO     | -- intersect: 28991311974.037033
[2024-06-22 22:41:06] 2024-06-23 02:40:45,342 | INFO     | intersect: 28991311974.037033
[2024-06-22 22:41:06] 2024-06-23 02:40:45,342 | INFO     | chi2: 0.3081024331644522
[2024-06-22 22:41:06] 2024-06-23 02:40:45,342 | INFO     | -- intersect: 28991311974.037033
[2024-06-22 22:41:06] 2024-06-23 02:40:45,342 | INFO     | current memory leak: -16.86 B/s (using 218 data points, chi2=0.31)
[2024-06-22 22:41:06] 2024-06-23 02:40:45,343 | INFO     | ..............................
[2024-06-22 22:41:06] 2024-06-23 02:40:45,343 | INFO     | . Timing measurements:
[2024-06-22 22:41:06] 2024-06-23 02:40:45,343 | INFO     | . get job = 0 s
[2024-06-22 22:41:06] 2024-06-23 02:40:45,343 | INFO     | . initial setup = 2 s
[2024-06-22 22:41:06] 2024-06-23 02:40:45,343 | INFO     | . payload setup = 6 s
[2024-06-22 22:41:06] 2024-06-23 02:40:45,343 | INFO     | . stage-in = 0 s
[2024-06-22 22:41:06] 2024-06-23 02:40:45,344 | INFO     | . payload execution = 15472 s
[2024-06-22 22:41:06] 2024-06-23 02:40:45,344 | INFO     | . stage-out = 2 s
[2024-06-22 22:41:06] 2024-06-23 02:40:45,344 | INFO     | . log creation = 0 s
[2024-06-22 22:41:06] 2024-06-23 02:40:45,344 | INFO     | ..............................
[2024-06-22 22:41:06] 2024-06-23 02:40:45,435 | INFO     | 
[2024-06-22 22:41:06] 2024-06-23 02:40:45,437 | WARNING  | process 1193888 is no longer using CPU - aborting
[2024-06-22 22:41:06] 2024-06-23 02:40:45,437 | INFO     | job summary report
[2024-06-22 22:41:06] 2024-06-23 02:40:45,437 | INFO     | aborting job monitoring since job object (job id=6231689699) has expired
[2024-06-22 22:41:06] 2024-06-23 02:40:45,437 | INFO     | --------------------------------------------------
[2024-06-22 22:41:06] 2024-06-23 02:40:45,437 | INFO     | PanDA job id: 6231689699
[2024-06-22 22:41:06] 2024-06-23 02:40:45,437 | INFO     | task id: 38921013
[2024-06-22 22:41:06] 2024-06-23 02:40:45,437 | INFO     | errors: (none)
[2024-06-22 22:41:06] 2024-06-23 02:40:45,437 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-22 22:41:06] 2024-06-23 02:40:45,438 | INFO     | pilot state: finished 
[2024-06-22 22:41:06] 2024-06-23 02:40:45,438 | INFO     | transexitcode: 0
[2024-06-22 22:41:06] 2024-06-23 02:40:45,438 | INFO     | exeerrorcode: 0
[2024-06-22 22:41:06] 2024-06-23 02:40:45,438 | INFO     | exeerrordiag: 
[2024-06-22 22:41:06] 2024-06-23 02:40:45,438 | INFO     | exitcode: 0
[2024-06-22 22:41:06] 2024-06-23 02:40:45,438 | INFO     | exitmsg: OK
[2024-06-22 22:41:06] 2024-06-23 02:40:45,438 | INFO     | cpuconsumptiontime: 166464 s
[2024-06-22 22:41:06] 2024-06-23 02:40:45,438 | INFO     | nevents: 400
[2024-06-22 22:41:06] 2024-06-23 02:40:45,438 | INFO     | neventsw: 0
[2024-06-22 22:41:06] 2024-06-23 02:40:45,438 | INFO     | pid: 1193888
[2024-06-22 22:41:06] 2024-06-23 02:40:45,438 | INFO     | pgrp: 1193888
[2024-06-22 22:41:06] 2024-06-23 02:40:45,439 | INFO     | corecount: 12
[2024-06-22 22:41:06] 2024-06-23 02:40:45,439 | INFO     | event service: False
[2024-06-22 22:41:06] 2024-06-23 02:40:45,439 | INFO     | sizes: {0: 2386990, 4: 2387196, 11: 2387224, 15482: 2418352, 15484: 2427326, 15487: 2427382, 15518: 2427680}
[2024-06-22 22:41:06] 2024-06-23 02:40:45,439 | INFO     | --------------------------------------------------
[2024-06-22 22:41:06] 2024-06-23 02:40:45,439 | INFO     | 
[2024-06-22 22:41:06] 2024-06-23 02:40:45,439 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/5
[2024-06-22 22:41:06] 2024-06-23 02:40:45,458 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-22 22:41:06] 2024-06-23 02:40:45,458 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-22 22:41:06] 2024-06-23 02:40:45,458 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-22 22:41:06] 2024-06-23 02:40:45,458 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-22 22:41:06] 2024-06-23 02:40:45,458 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-22 22:41:06] 2024-06-23 02:40:45,458 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-22 22:41:06] 2024-06-23 02:40:45,458 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-22 22:41:06] 2024-06-23 02:40:45,459 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-22 22:41:06] 2024-06-23 02:40:45,459 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-22 22:41:06] 2024-06-23 02:40:45,459 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-22 22:41:06] 2024-06-23 02:40:45,459 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-22 22:41:06] 2024-06-23 02:40:45,459 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-22 22:41:06] 2024-06-23 02:40:45,459 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-22 22:41:06] 2024-06-23 02:40:45,459 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-22 22:41:06] 2024-06-23 02:40:45,459 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-22 22:41:06] 2024-06-23 02:40:45,459 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-22 22:41:06] 2024-06-23 02:40:45,459 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-22 22:41:06] 2024-06-23 02:40:45,459 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-22 22:41:06] 2024-06-23 02:40:45,459 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-22 22:41:06] 2024-06-23 02:40:45,460 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-22 22:41:06] 2024-06-23 02:40:45,460 | INFO     | job 6231689699 has completed (purged errors)
[2024-06-22 22:41:06] 2024-06-23 02:40:45,460 | INFO     | overall cleanup function is called
[2024-06-22 22:41:06] 2024-06-23 02:40:46,466 | INFO     | --- collectZombieJob: --- 10, [1193888]
[2024-06-22 22:41:06] 2024-06-23 02:40:46,467 | INFO     | zombie collector waiting for pid 1193888
[2024-06-22 22:41:06] 2024-06-23 02:40:46,467 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-22 22:41:06] 2024-06-23 02:40:47,470 | INFO     | collected zombie processes
[2024-06-22 22:41:06] 2024-06-23 02:40:47,471 | INFO     | will now attempt to kill all subprocesses of pid=1193888
[2024-06-22 22:41:06] 2024-06-23 02:40:47,581 | INFO     | process IDs to be killed: [1193888] (in reverse order)
[2024-06-22 22:41:06] 2024-06-23 02:40:47,690 | WARNING  | found no corresponding commands to process id(s)
[2024-06-22 22:41:06] 2024-06-23 02:40:47,691 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-22 22:41:06] 2024-06-23 02:40:47,699 | INFO     | did not find any defunct processes belonging to 1193888
[2024-06-22 22:41:06] 2024-06-23 02:40:47,706 | INFO     | did not find any defunct processes belonging to 1193888
[2024-06-22 22:41:06] 2024-06-23 02:40:47,706 | INFO     | ready for new job
[2024-06-22 22:41:06] 2024-06-23 02:40:47,706 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-22 22:41:06] 2024-06-23 02:40:47,708 | INFO     | *************************************
[2024-06-22 22:41:06] 2024-06-23 02:40:47,708 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-22 22:41:06] 2024-06-23 02:40:47,708 | INFO     | *************************************
[2024-06-22 22:41:06] 2024-06-23 02:40:47,708 | INFO     | 
[2024-06-22 22:41:06] 2024-06-23 02:40:47,729 | INFO     | architecture information:
[2024-06-22 22:41:06] 2024-06-23 02:40:47,730 | INFO     | executing command: cat /etc/os-release
[2024-06-22 22:41:06] 2024-06-23 02:40:47,740 | INFO     | cat /etc/os-release:
[2024-06-22 22:41:06] NAME="CentOS Linux"
[2024-06-22 22:41:06] VERSION="7 (Core)"
[2024-06-22 22:41:06] ID="centos"
[2024-06-22 22:41:06] ID_LIKE="rhel fedora"
[2024-06-22 22:41:06] VERSION_ID="7"
[2024-06-22 22:41:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-22 22:41:06] ANSI_COLOR="0;31"
[2024-06-22 22:41:06] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-22 22:41:06] HOME_URL="https://www.centos.org/"
[2024-06-22 22:41:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-22 22:41:06] 
[2024-06-22 22:41:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-22 22:41:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-22 22:41:06] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-22 22:41:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-22 22:41:06] 
[2024-06-22 22:41:06] 2024-06-23 02:40:47,740 | INFO     | *************************************
[2024-06-22 22:41:06] 2024-06-23 02:40:48,243 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/5
[2024-06-22 22:41:06] 2024-06-23 02:40:48,257 | INFO     | sufficient remaining disk space (387612409856 B)
[2024-06-22 22:41:06] 2024-06-23 02:40:48,258 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-22 22:41:06] 2024-06-23 02:40:48,259 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-22 22:41:06] 2024-06-23 02:40:48,259 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-22 22:41:06] 2024-06-23 02:40:48,259 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-22 22:41:06] 2024-06-23 02:40:48,259 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-22 22:41:06] 2024-06-23 02:40:48,260 | INFO     | found 0 job(s) in 20 queues
[2024-06-22 22:41:06] 2024-06-23 02:40:48,260 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-22 22:41:06] 2024-06-23 02:40:48,260 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-22 22:41:06] 2024-06-23 02:40:48,830 | INFO     | all payload control threads have been joined
[2024-06-22 22:41:06] 2024-06-23 02:40:48,918 | INFO     | all data control threads have been joined
[2024-06-22 22:41:06] 2024-06-23 02:40:48,942 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-22 22:41:06] 2024-06-23 02:40:48,943 | INFO     | aborting loop
[2024-06-22 22:41:06] 2024-06-23 02:40:49,062 | INFO     | all job control threads have been joined
[2024-06-22 22:41:06] 2024-06-23 02:40:49,263 | INFO     | [job] retrieve thread has finished
[2024-06-22 22:41:06] 2024-06-23 02:40:49,463 | INFO     | [job] validate thread has finished
[2024-06-22 22:41:06] 2024-06-23 02:40:49,743 | INFO     | [payload] execute_payloads thread has finished
[2024-06-22 22:41:06] 2024-06-23 02:40:49,822 | INFO     | [payload] validate_pre thread has finished
[2024-06-22 22:41:06] 2024-06-23 02:40:49,834 | INFO     | [payload] control thread has finished
[2024-06-22 22:41:06] 2024-06-23 02:40:49,856 | INFO     | [payload] failed_post thread has finished
[2024-06-22 22:41:06] 2024-06-23 02:40:49,923 | INFO     | [data] control thread has finished
[2024-06-22 22:41:06] 2024-06-23 02:40:49,946 | INFO     | [job] job monitor thread has finished
[2024-06-22 22:41:06] 2024-06-23 02:40:49,966 | INFO     | [job] create_data_payload thread has finished
[2024-06-22 22:41:06] 2024-06-23 02:40:50,022 | INFO     | [data] copytool_in thread has finished
[2024-06-22 22:41:06] 2024-06-23 02:40:50,066 | INFO     | [job] control thread has finished
[2024-06-22 22:41:06] 2024-06-23 02:40:50,262 | INFO     | [data] copytool_out thread has finished
[2024-06-22 22:41:06] 2024-06-23 02:40:50,438 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-22 22:41:06] 2024-06-23 02:40:50,854 | INFO     | [payload] validate_post thread has finished
[2024-06-22 22:41:06] 2024-06-23 02:40:51,443 | INFO     | [job] queue monitor thread has finished
[2024-06-22 22:41:06] 2024-06-23 02:40:52,262 | INFO     | [data] queue_monitor thread has finished
[2024-06-22 22:41:06] 2024-06-23 02:40:58,378 | INFO     | job.realtimelogging is not enabled
[2024-06-22 22:41:06] 2024-06-23 02:40:59,382 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-22 22:41:06] 2024-06-23 02:41:00,982 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139803901900608)>', '<ExcThread(monitor, started 139803677300480)>']
[2024-06-22 22:41:06] 2024-06-23 02:41:01,310 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-22 22:41:06] 2024-06-23 02:41:01,311 | INFO     | [monitor] control thread has ended
[2024-06-22 22:41:06] 2024-06-23 02:41:06,006 | INFO     | all workflow threads have been joined
[2024-06-22 22:41:06] 2024-06-23 02:41:06,007 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-22 22:41:06] 2024-06-23 02:41:06,007 | INFO     | traces error code: 0
[2024-06-22 22:41:06] 2024-06-23 02:41:06,007 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-22 22:41:06] 2024-06-23 02:41:06,097 [wrapper] ==== pilot stdout END ====
[2024-06-22 22:41:06] 2024-06-23 02:41:06,099 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-22 22:41:06] 2024-06-23 02:41:06,100 [wrapper] pilotpid: 1186269
[2024-06-22 22:41:06] 2024-06-23 02:41:06,102 [wrapper] Pilot exit status: 0
[2024-06-22 22:41:06] 2024-06-23 02:41:06,108 [wrapper] pandaids: 6231689699
[2024-06-22 22:41:06] 2024-06-23 02:41:06,160 [wrapper] cleanup supervisor_pilot 1872523 1186270
[2024-06-22 22:41:06] 2024-06-23 02:41:06,162 [wrapper] Test setup, not cleaning
[2024-06-22 22:41:06] 2024-06-23 02:41:06,164 [wrapper] ==== wrapper stdout END ====
[2024-06-22 22:41:06] 2024-06-23 02:41:06,166 [wrapper] ==== wrapper stderr END ====
[2024-06-22 22:41:06] 2024-06-23 02:41:06,171 [wrapper] apfmon messages muted
[2024-06-22 22:41:06]  *** Error codes and diagnostics ***
[2024-06-22 22:41:06]     "exeErrorCode": 0,
[2024-06-22 22:41:06]     "exeErrorDiag": "",
[2024-06-22 22:41:06]     "pilotErrorCode": 0,
[2024-06-22 22:41:06]     "pilotErrorDiag": "",
[2024-06-22 22:41:06]  *** Listing of results directory ***
[2024-06-22 22:41:06] total 873192
[2024-06-22 22:41:06] -rw-r--r-- 1 boinc boinc    469766 Jun 15 18:00 pilot3.tar.gz
[2024-06-22 22:41:06] -rwx------ 1 boinc boinc     32308 Jun 15 18:09 runpilot2-wrapper.sh
[2024-06-22 22:41:06] -rw-r--r-- 1 boinc boinc      5654 Jun 15 18:09 queuedata.json
[2024-06-22 22:41:06] -rw-r--r-- 1 boinc boinc       100 Jun 22 18:21 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-22 22:41:06] -rwxr-xr-x 1 boinc boinc      7986 Jun 22 18:21 run_atlas
[2024-06-22 22:41:06] -rw-r--r-- 1 boinc boinc       105 Jun 22 18:21 job.xml
[2024-06-22 22:41:06] -rw-r--r-- 2 boinc boinc     17537 Jun 22 18:21 start_atlas.sh
[2024-06-22 22:41:06] drwxrwx--x 2 boinc boinc      4096 Jun 22 18:21 shared
[2024-06-22 22:41:06] -rw-r--r-- 2 boinc boinc    482525 Jun 22 18:21 input.tar.gz
[2024-06-22 22:41:06] -rw-r--r-- 1 boinc boinc      7598 Jun 22 18:21 init_data.xml
[2024-06-22 22:41:06] -rw-r--r-- 2 boinc boinc 540182436 Jun 22 18:21 EVNT.38776210._001030.pool.root.1
[2024-06-22 22:41:06] -rw-r--r-- 1 boinc boinc         0 Jun 22 18:21 boinc_lockfile
[2024-06-22 22:41:06] -rw-r--r-- 1 boinc boinc      2647 Jun 22 18:21 pandaJob.out
[2024-06-22 22:41:06] -rw------- 1 boinc boinc       460 Jun 22 18:21 setup.sh.local
[2024-06-22 22:41:06] -rw------- 1 boinc boinc   1025753 Jun 22 18:21 agis_schedconf.cvmfs.json
[2024-06-22 22:41:06] -rw------- 1 boinc boinc   1321363 Jun 22 18:21 cric_ddmendpoints.json
[2024-06-22 22:41:06] drwx------ 4 boinc boinc      4096 Jun 22 18:21 pilot3
[2024-06-22 22:41:06] -rw------- 1 boinc boinc 346307408 Jun 22 22:39 HITS.38921013._038669.pool.root.1
[2024-06-22 22:41:06] -rw-r--r-- 1 boinc boinc       532 Jun 22 22:39 boinc_task_state.xml
[2024-06-22 22:41:06] -rw------- 1 boinc boinc        95 Jun 22 22:40 pilot_heartbeat.json
[2024-06-22 22:41:06] -rw------- 1 boinc boinc      1030 Jun 22 22:40 memory_monitor_summary.json
[2024-06-22 22:41:06] -rw------- 1 boinc boinc         0 Jun 22 22:40 agis_ddmendpoints.agis.ALL.json
[2024-06-22 22:41:06] -rw------- 1 boinc boinc    487947 Jun 22 22:40 log.38921013._038669.job.log.tgz.1
[2024-06-22 22:41:06] -rw------- 1 boinc boinc      7699 Jun 22 22:40 heartbeat.json
[2024-06-22 22:41:06] -rw-r--r-- 1 boinc boinc      8192 Jun 22 22:41 boinc_mmap_file
[2024-06-22 22:41:06] -rw-r--r-- 1 boinc boinc        29 Jun 22 22:41 wrapper_checkpoint.txt
[2024-06-22 22:41:06] -rw------- 1 boinc boinc      4414 Jun 22 22:41 pilotlog.txt
[2024-06-22 22:41:06] -rw------- 1 boinc boinc   1570800 Jun 22 22:41 log.38921013._038669.job.log.1
[2024-06-22 22:41:06] -rw------- 1 boinc boinc       357 Jun 22 22:41 output.list
[2024-06-22 22:41:06] -rw-r--r-- 1 boinc boinc       620 Jun 22 22:41 runtime_log
[2024-06-22 22:41:06] -rw------- 1 boinc boinc   2078720 Jun 22 22:41 result.tar.gz
[2024-06-22 22:41:06] -rw-r--r-- 1 boinc boinc     11460 Jun 22 22:41 runtime_log.err
[2024-06-22 22:41:06] -rw------- 1 boinc boinc       645 Jun 22 22:41 m4PLDmplqc5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmvmUKDmTakrKn.diag
[2024-06-22 22:41:06] -rw-r--r-- 1 boinc boinc     21309 Jun 22 22:41 stderr.txt
[2024-06-22 22:41:06] HITS file was successfully produced:
[2024-06-22 22:41:06] -rw------- 1 boinc boinc 346307408 Jun 22 22:39 shared/HITS.pool.root.1
[2024-06-22 22:41:06]  *** Contents of shared directory: ***
[2024-06-22 22:41:06] total 868248
[2024-06-22 22:41:06] -rw-r--r-- 2 boinc boinc     17537 Jun 22 18:21 start_atlas.sh
[2024-06-22 22:41:06] -rw-r--r-- 2 boinc boinc    482525 Jun 22 18:21 input.tar.gz
[2024-06-22 22:41:06] -rw-r--r-- 2 boinc boinc 540182436 Jun 22 18:21 ATLAS.root_0
[2024-06-22 22:41:06] -rw------- 1 boinc boinc 346307408 Jun 22 22:39 HITS.pool.root.1
[2024-06-22 22:41:06] -rw------- 1 boinc boinc   2078720 Jun 22 22:41 result.tar.gz
22:41:07 (1181452): run_atlas exited; CPU time 166146.976742
22:41:07 (1181452): called boinc_finish(0)

</stderr_txt>
]]>

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