Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
10:06:27 (3746645): wrapper (7.7.26015): starting
10:06:27 (3746645): wrapper: running run_atlas (--nthreads 12)
[2024-06-22 10:06:27] Arguments: --nthreads 12
[2024-06-22 10:06:27] Threads: 12
[2024-06-22 10:06:27] Checking for CVMFS
[2024-06-22 10:06:27] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-22 10:06:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-22 10:06:27] Running cvmfs_config stat atlas.cern.ch
[2024-06-22 10:06:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-22 10:06:27] 2.11.2.0 2238775 496 53684 134167 1 189 2680048 4194304 906 130560 0 735747 98.825 746824 2529 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.150.1:3128 1
[2024-06-22 10:06:27] CVMFS is ok
[2024-06-22 10:06:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-22 10:06:27] Checking for apptainer binary...
[2024-06-22 10:06:27] apptainer is not installed, using version from CVMFS
[2024-06-22 10:06:27] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-22 10:06:27] Trebeth
[2024-06-22 10:06:27] apptainer works
[2024-06-22 10:06:27] Set ATHENA_PROC_NUMBER=12
[2024-06-22 10:06:27] Set ATHENA_CORE_NUMBER=12
[2024-06-22 10:06:27] Starting ATLAS job with PandaID=6231689081
[2024-06-22 10:06:27] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-22 18:49:09]  *** The last 200 lines of the pilot log: ***
[2024-06-22 18:49:09] 2024-06-22 22:48:51,333 | INFO     | monitor loop #2398: job 0:6231689081 is in state 'finished'
[2024-06-22 18:49:09] 2024-06-22 22:48:51,333 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-22 18:49:09] 2024-06-22 22:48:53,837 | INFO     | monitor loop #2399: job 0:6231689081 is in state 'finished'
[2024-06-22 18:49:09] 2024-06-22 22:48:53,837 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-22 18:49:09] 2024-06-22 22:48:54,620 | INFO     | CPU arch script returned: x86-64-v3
[2024-06-22 18:49:09] 2024-06-22 22:48:54,620 | INFO     | using path: /var/lib/boinc-client/slots/10/PanDA_Pilot-6231689081/memory_monitor_summary.json (trf name=prmon)
[2024-06-22 18:49:09] 2024-06-22 22:48:54,621 | INFO     | extracted standard info from prmon json
[2024-06-22 18:49:09] 2024-06-22 22:48:54,621 | INFO     | extracted standard memory fields from prmon json
[2024-06-22 18:49:09] 2024-06-22 22:48:54,622 | WARNING  | GPU info not found in prmon json
[2024-06-22 18:49:09] 2024-06-22 22:48:54,622 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-22 18:49:09] 2024-06-22 22:48:54,622 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-22 18:49:09] 2024-06-22 22:48:54,632 | INFO     | fitting pss+swap vs Time
[2024-06-22 18:49:09] 2024-06-22 22:48:54,633 | INFO     | model: linear, x: [1719065218.0, 1719065279.0, 1719065340.0, 1719065401.0, 1719065462.0, 1719065523.0, 1719065584.0, 1719065645.0, 1719065706.0, 1719065767.0, 1719
[2024-06-22 18:49:09] 2024-06-22 22:48:54,633 | INFO     | sum of square deviations: 42108147652.5
[2024-06-22 18:49:09] 2024-06-22 22:48:54,639 | INFO     | sum of deviations: 217645099572.0
[2024-06-22 18:49:09] 2024-06-22 22:48:54,639 | INFO     | mean x: 1719080864.5
[2024-06-22 18:49:09] 2024-06-22 22:48:54,639 | INFO     | mean y: 2713526.319066148
[2024-06-22 18:49:09] 2024-06-22 22:48:54,639 | INFO     | -- intersect: -8882729001.671326
[2024-06-22 18:49:09] 2024-06-22 22:48:54,640 | INFO     | intersect: -8882729001.671326
[2024-06-22 18:49:09] 2024-06-22 22:48:54,640 | INFO     | chi2: 3.164652611606007
[2024-06-22 18:49:09] 2024-06-22 22:48:54,641 | INFO     | model: linear, x: [1719065218.0, 1719065279.0, 1719065340.0, 1719065401.0, 1719065462.0, 1719065523.0, 1719065584.0, 1719065645.0, 1719065706.0, 1719065767.0, 1719
[2024-06-22 18:49:09] 2024-06-22 22:48:54,641 | INFO     | sum of square deviations: 40891222510.0
[2024-06-22 18:49:09] 2024-06-22 22:48:54,647 | INFO     | sum of deviations: 252450686239.99997
[2024-06-22 18:49:09] 2024-06-22 22:48:54,647 | INFO     | mean x: 1719080712.0
[2024-06-22 18:49:09] 2024-06-22 22:48:54,647 | INFO     | mean y: 2717850.4125736738
[2024-06-22 18:49:09] 2024-06-22 22:48:54,647 | INFO     | -- intersect: -10610393688.138681
[2024-06-22 18:49:09] 2024-06-22 22:48:54,647 | INFO     | intersect: -10610393688.138681
[2024-06-22 18:49:09] 2024-06-22 22:48:54,648 | INFO     | chi2: 2.375751359415462
[2024-06-22 18:49:09] 2024-06-22 22:48:54,648 | INFO     | current chi2=2.375751359415462 (change=24.928526097851577 %)
[2024-06-22 18:49:09] 2024-06-22 22:48:54,648 | INFO     | right removable region: 508
[2024-06-22 18:49:09] 2024-06-22 22:48:54,649 | INFO     | model: linear, x: [1719065523.0, 1719065584.0, 1719065645.0, 1719065706.0, 1719065767.0, 1719065828.0, 1719065889.0, 1719065950.0, 1719066011.0, 1719066072.0, 1719
[2024-06-22 18:49:09] 2024-06-22 22:48:54,649 | INFO     | sum of square deviations: 40891222510.0
[2024-06-22 18:49:09] 2024-06-22 22:48:54,655 | INFO     | sum of deviations: 84580104734.00002
[2024-06-22 18:49:09] 2024-06-22 22:48:54,655 | INFO     | mean x: 1719081017.0
[2024-06-22 18:49:09] 2024-06-22 22:48:54,655 | INFO     | mean y: 2730173.3791748527
[2024-06-22 18:49:09] 2024-06-22 22:48:54,655 | INFO     | -- intersect: -3553046434.388751
[2024-06-22 18:49:09] 2024-06-22 22:48:54,655 | INFO     | intersect: -3553046434.388751
[2024-06-22 18:49:09] 2024-06-22 22:48:54,656 | INFO     | chi2: 0.9849893024352576
[2024-06-22 18:49:09] 2024-06-22 22:48:54,656 | INFO     | current chi2=0.9849893024352576 (change=68.87527879607005 %)
[2024-06-22 18:49:09] 2024-06-22 22:48:54,657 | INFO     | model: linear, x: [1719065828.0, 1719065889.0, 1719065950.0, 1719066011.0, 1719066072.0, 1719066133.0, 1719066194.0, 1719066255.0, 1719066316.0, 1719066377.0, 1719
[2024-06-22 18:49:09] 2024-06-22 22:48:54,657 | INFO     | sum of square deviations: 39697972230.0
[2024-06-22 18:49:09] 2024-06-22 22:48:54,667 | INFO     | sum of deviations: 46421869890.49998
[2024-06-22 18:49:09] 2024-06-22 22:48:54,667 | INFO     | mean x: 1719081169.5
[2024-06-22 18:49:09] 2024-06-22 22:48:54,667 | INFO     | mean y: 2735046.878968254
[2024-06-22 18:49:09] 2024-06-22 22:48:54,667 | INFO     | -- intersect: -2007517817.4078867
[2024-06-22 18:49:09] 2024-06-22 22:48:54,667 | INFO     | intersect: -2007517817.4078867
[2024-06-22 18:49:09] 2024-06-22 22:48:54,668 | INFO     | chi2: 0.8343585458657974
[2024-06-22 18:49:09] 2024-06-22 22:48:54,668 | INFO     | current chi2=0.8343585458657974 (change=15.292628681047127 %)
[2024-06-22 18:49:09] 2024-06-22 22:48:54,668 | INFO     | left removable region: 20
[2024-06-22 18:49:09] 2024-06-22 22:48:54,669 | INFO     | model: linear, x: [1719066438.0, 1719066499.0, 1719066560.0, 1719066621.0, 1719066682.0, 1719066743.0, 1719066804.0, 1719066865.0, 1719066926.0, 1719066987.0, 1719
[2024-06-22 18:49:09] 2024-06-22 22:48:54,669 | INFO     | sum of square deviations: 36035957522.0
[2024-06-22 18:49:09] 2024-06-22 22:48:54,674 | INFO     | sum of deviations: 66111977205.00019
[2024-06-22 18:49:09] 2024-06-22 22:48:54,674 | INFO     | mean x: 1719081291.5
[2024-06-22 18:49:09] 2024-06-22 22:48:54,674 | INFO     | mean y: 2741722.704918033
[2024-06-22 18:49:09] 2024-06-22 22:48:54,674 | INFO     | -- intersect: -3151104351.394977
[2024-06-22 18:49:09] 2024-06-22 22:48:54,674 | INFO     | intersect: -3151104351.394977
[2024-06-22 18:49:09] 2024-06-22 22:48:54,675 | INFO     | chi2: 0.003525166312066617
[2024-06-22 18:49:09] 2024-06-22 22:48:54,675 | INFO     | -- intersect: -3151104351.394977
[2024-06-22 18:49:09] 2024-06-22 22:48:54,675 | INFO     | current memory leak: 1.83 B/s (using 488 data points, chi2=0.00)
[2024-06-22 18:49:09] 2024-06-22 22:48:54,676 | INFO     | ..............................
[2024-06-22 18:49:09] 2024-06-22 22:48:54,676 | INFO     | . Timing measurements:
[2024-06-22 18:49:09] 2024-06-22 22:48:54,676 | INFO     | . get job = 0 s
[2024-06-22 18:49:09] 2024-06-22 22:48:54,676 | INFO     | . initial setup = 1 s
[2024-06-22 18:49:09] 2024-06-22 22:48:54,676 | INFO     | . payload setup = 4 s
[2024-06-22 18:49:09] 2024-06-22 22:48:54,676 | INFO     | . stage-in = 0 s
[2024-06-22 18:49:09] 2024-06-22 22:48:54,677 | INFO     | . payload execution = 31306 s
[2024-06-22 18:49:09] 2024-06-22 22:48:54,677 | INFO     | . stage-out = 2 s
[2024-06-22 18:49:09] 2024-06-22 22:48:54,677 | INFO     | . log creation = 0 s
[2024-06-22 18:49:09] 2024-06-22 22:48:54,677 | INFO     | ..............................
[2024-06-22 18:49:09] 2024-06-22 22:48:54,772 | INFO     | 
[2024-06-22 18:49:09] 2024-06-22 22:48:54,774 | INFO     | job summary report
[2024-06-22 18:49:09] 2024-06-22 22:48:54,774 | INFO     | --------------------------------------------------
[2024-06-22 18:49:09] 2024-06-22 22:48:54,775 | INFO     | PanDA job id: 6231689081
[2024-06-22 18:49:09] 2024-06-22 22:48:54,775 | INFO     | task id: 38921013
[2024-06-22 18:49:09] 2024-06-22 22:48:54,775 | INFO     | errors: (none)
[2024-06-22 18:49:09] 2024-06-22 22:48:54,775 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-22 18:49:09] 2024-06-22 22:48:54,775 | INFO     | pilot state: finished 
[2024-06-22 18:49:09] 2024-06-22 22:48:54,775 | INFO     | transexitcode: 0
[2024-06-22 18:49:09] 2024-06-22 22:48:54,775 | INFO     | exeerrorcode: 0
[2024-06-22 18:49:09] 2024-06-22 22:48:54,775 | INFO     | exeerrordiag: 
[2024-06-22 18:49:09] 2024-06-22 22:48:54,775 | INFO     | exitcode: 0
[2024-06-22 18:49:09] 2024-06-22 22:48:54,775 | INFO     | exitmsg: OK
[2024-06-22 18:49:09] 2024-06-22 22:48:54,776 | INFO     | cpuconsumptiontime: 163898 s
[2024-06-22 18:49:09] 2024-06-22 22:48:54,776 | INFO     | nevents: 400
[2024-06-22 18:49:09] 2024-06-22 22:48:54,776 | INFO     | neventsw: 0
[2024-06-22 18:49:09] 2024-06-22 22:48:54,776 | INFO     | pid: 3763922
[2024-06-22 18:49:09] 2024-06-22 22:48:54,776 | INFO     | pgrp: 3763922
[2024-06-22 18:49:09] 2024-06-22 22:48:54,776 | INFO     | corecount: 12
[2024-06-22 18:49:09] 2024-06-22 22:48:54,776 | INFO     | event service: False
[2024-06-22 18:49:09] 2024-06-22 22:48:54,776 | INFO     | sizes: {0: 2387091, 3: 2387297, 11: 2387325, 31314: 2426139, 31318: 2435171, 31324: 2435285}
[2024-06-22 18:49:09] 2024-06-22 22:48:54,776 | INFO     | --------------------------------------------------
[2024-06-22 18:49:09] 2024-06-22 22:48:54,776 | INFO     | 
[2024-06-22 18:49:09] 2024-06-22 22:48:54,777 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/10
[2024-06-22 18:49:09] 2024-06-22 22:48:54,803 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-22 18:49:09] 2024-06-22 22:48:54,803 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-22 18:49:09] 2024-06-22 22:48:54,803 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-22 18:49:09] 2024-06-22 22:48:54,803 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-22 18:49:09] 2024-06-22 22:48:54,803 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-22 18:49:09] 2024-06-22 22:48:54,803 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-22 18:49:09] 2024-06-22 22:48:54,804 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-22 18:49:09] 2024-06-22 22:48:54,804 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-22 18:49:09] 2024-06-22 22:48:54,804 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-22 18:49:09] 2024-06-22 22:48:54,804 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-22 18:49:09] 2024-06-22 22:48:54,804 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-22 18:49:09] 2024-06-22 22:48:54,804 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-22 18:49:09] 2024-06-22 22:48:54,804 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-22 18:49:09] 2024-06-22 22:48:54,804 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-22 18:49:09] 2024-06-22 22:48:54,804 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-22 18:49:09] 2024-06-22 22:48:54,804 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-22 18:49:09] 2024-06-22 22:48:54,805 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-22 18:49:09] 2024-06-22 22:48:54,805 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-22 18:49:09] 2024-06-22 22:48:54,805 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-22 18:49:09] 2024-06-22 22:48:54,805 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-22 18:49:09] 2024-06-22 22:48:54,805 | INFO     | job 6231689081 has completed (purged errors)
[2024-06-22 18:49:09] 2024-06-22 22:48:54,805 | INFO     | overall cleanup function is called
[2024-06-22 18:49:09] 2024-06-22 22:48:55,810 | INFO     | --- collectZombieJob: --- 10, [3763922]
[2024-06-22 18:49:09] 2024-06-22 22:48:55,811 | INFO     | zombie collector waiting for pid 3763922
[2024-06-22 18:49:09] 2024-06-22 22:48:55,811 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-22 18:49:09] 2024-06-22 22:48:56,814 | INFO     | collected zombie processes
[2024-06-22 18:49:09] 2024-06-22 22:48:56,815 | INFO     | will now attempt to kill all subprocesses of pid=3763922
[2024-06-22 18:49:09] 2024-06-22 22:48:56,940 | INFO     | process IDs to be killed: [3763922] (in reverse order)
[2024-06-22 18:49:09] 2024-06-22 22:48:57,048 | WARNING  | found no corresponding commands to process id(s)
[2024-06-22 18:49:09] 2024-06-22 22:48:57,049 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-22 18:49:09] 2024-06-22 22:48:57,066 | INFO     | did not find any defunct processes belonging to 3763922
[2024-06-22 18:49:09] 2024-06-22 22:48:57,076 | INFO     | did not find any defunct processes belonging to 3763922
[2024-06-22 18:49:09] 2024-06-22 22:48:57,076 | INFO     | ready for new job
[2024-06-22 18:49:09] 2024-06-22 22:48:57,076 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-22 18:49:09] 2024-06-22 22:48:57,079 | INFO     | *************************************
[2024-06-22 18:49:09] 2024-06-22 22:48:57,079 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-22 18:49:09] 2024-06-22 22:48:57,079 | INFO     | *************************************
[2024-06-22 18:49:09] 2024-06-22 22:48:57,079 | INFO     | 
[2024-06-22 18:49:09] 2024-06-22 22:48:57,101 | INFO     | architecture information:
[2024-06-22 18:49:09] 2024-06-22 22:48:57,102 | INFO     | executing command: cat /etc/os-release
[2024-06-22 18:49:09] 2024-06-22 22:48:57,115 | INFO     | cat /etc/os-release:
[2024-06-22 18:49:09] NAME="CentOS Linux"
[2024-06-22 18:49:09] VERSION="7 (Core)"
[2024-06-22 18:49:09] ID="centos"
[2024-06-22 18:49:09] ID_LIKE="rhel fedora"
[2024-06-22 18:49:09] VERSION_ID="7"
[2024-06-22 18:49:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-22 18:49:09] ANSI_COLOR="0;31"
[2024-06-22 18:49:09] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-22 18:49:09] HOME_URL="https://www.centos.org/"
[2024-06-22 18:49:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-22 18:49:09] 
[2024-06-22 18:49:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-22 18:49:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-22 18:49:09] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-22 18:49:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-22 18:49:09] 
[2024-06-22 18:49:09] 2024-06-22 22:48:57,115 | INFO     | *************************************
[2024-06-22 18:49:09] 2024-06-22 22:48:57,622 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/10
[2024-06-22 18:49:09] 2024-06-22 22:48:57,639 | INFO     | sufficient remaining disk space (385881210880 B)
[2024-06-22 18:49:09] 2024-06-22 22:48:57,639 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-22 18:49:09] 2024-06-22 22:48:57,639 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-22 18:49:09] 2024-06-22 22:48:57,640 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-22 18:49:09] 2024-06-22 22:48:57,640 | INFO     | found 0 job(s) in 20 queues
[2024-06-22 18:49:09] 2024-06-22 22:48:57,640 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-22 18:49:09] 2024-06-22 22:48:57,640 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-22 18:49:09] 2024-06-22 22:48:57,642 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-22 18:49:09] 2024-06-22 22:48:57,643 | INFO     | aborting loop
[2024-06-22 18:49:09] 2024-06-22 22:48:57,901 | INFO     | all job control threads have been joined
[2024-06-22 18:49:09] 2024-06-22 22:48:57,994 | INFO     | all data control threads have been joined
[2024-06-22 18:49:09] 2024-06-22 22:48:58,306 | INFO     | all payload control threads have been joined
[2024-06-22 18:49:09] 2024-06-22 22:48:58,643 | INFO     | [job] retrieve thread has finished
[2024-06-22 18:49:09] 2024-06-22 22:48:58,648 | INFO     | [job] job monitor thread has finished
[2024-06-22 18:49:09] 2024-06-22 22:48:58,670 | INFO     | [payload] validate_post thread has finished
[2024-06-22 18:49:09] 2024-06-22 22:48:58,903 | INFO     | [job] control thread has finished
[2024-06-22 18:49:09] 2024-06-22 22:48:58,998 | INFO     | [data] control thread has finished
[2024-06-22 18:49:09] 2024-06-22 22:48:59,062 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-22 18:49:09] 2024-06-22 22:48:59,126 | INFO     | [data] copytool_in thread has finished
[2024-06-22 18:49:09] 2024-06-22 22:48:59,127 | INFO     | [job] create_data_payload thread has finished
[2024-06-22 18:49:09] 2024-06-22 22:48:59,238 | INFO     | [payload] execute_payloads thread has finished
[2024-06-22 18:49:09] 2024-06-22 22:48:59,310 | INFO     | [payload] control thread has finished
[2024-06-22 18:49:09] 2024-06-22 22:48:59,416 | INFO     | [payload] failed_post thread has finished
[2024-06-22 18:49:09] 2024-06-22 22:48:59,430 | INFO     | [payload] validate_pre thread has finished
[2024-06-22 18:49:09] 2024-06-22 22:48:59,477 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-22 18:49:09] 2024-06-22 22:48:59,727 | INFO     | [job] validate thread has finished
[2024-06-22 18:49:09] 2024-06-22 22:48:59,782 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-22 18:49:09] 2024-06-22 22:49:00,126 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-22 18:49:09] 2024-06-22 22:49:00,786 | INFO     | [job] queue monitor thread has finished
[2024-06-22 18:49:09] 2024-06-22 22:49:01,070 | INFO     | [data] copytool_out thread has finished
[2024-06-22 18:49:09] 2024-06-22 22:49:03,486 | INFO     | [data] queue_monitor thread has finished
[2024-06-22 18:49:09] 2024-06-22 22:49:04,650 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140314864523072)>', '<ExcThread(monitor, started 140314291463936)>']
[2024-06-22 18:49:09] 2024-06-22 22:49:04,666 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-22 18:49:09] 2024-06-22 22:49:04,667 | INFO     | [monitor] control thread has ended
[2024-06-22 18:49:09] 2024-06-22 22:49:09,675 | INFO     | all workflow threads have been joined
[2024-06-22 18:49:09] 2024-06-22 22:49:09,675 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-22 18:49:09] 2024-06-22 22:49:09,675 | INFO     | traces error code: 0
[2024-06-22 18:49:09] 2024-06-22 22:49:09,676 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-22 18:49:09] 2024-06-22 22:49:09,759 [wrapper] ==== pilot stdout END ====
[2024-06-22 18:49:09] 2024-06-22 22:49:09,761 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-22 18:49:09] 2024-06-22 22:49:09,763 [wrapper] pilotpid: 3751334
[2024-06-22 18:49:09] 2024-06-22 22:49:09,765 [wrapper] Pilot exit status: 0
[2024-06-22 18:49:09] 2024-06-22 22:49:09,774 [wrapper] pandaids: 6231689081
[2024-06-22 18:49:09] 2024-06-22 22:49:09,827 [wrapper] cleanup supervisor_pilot 1229453 3751335
[2024-06-22 18:49:09] 2024-06-22 22:49:09,830 [wrapper] Test setup, not cleaning
[2024-06-22 18:49:09] 2024-06-22 22:49:09,832 [wrapper] ==== wrapper stdout END ====
[2024-06-22 18:49:09] 2024-06-22 22:49:09,833 [wrapper] ==== wrapper stderr END ====
[2024-06-22 18:49:09] 2024-06-22 22:49:09,837 [wrapper] apfmon messages muted
[2024-06-22 18:49:09]  *** Error codes and diagnostics ***
[2024-06-22 18:49:09]     "exeErrorCode": 0,
[2024-06-22 18:49:09]     "exeErrorDiag": "",
[2024-06-22 18:49:09]     "pilotErrorCode": 0,
[2024-06-22 18:49:09]     "pilotErrorDiag": "",
[2024-06-22 18:49:09]  *** Listing of results directory ***
[2024-06-22 18:49:09] total 883728
[2024-06-22 18:49:09] -rw-r--r-- 1 boinc boinc    469766 Jun 15 17:25 pilot3.tar.gz
[2024-06-22 18:49:09] -rwx------ 1 boinc boinc     32308 Jun 15 17:52 runpilot2-wrapper.sh
[2024-06-22 18:49:09] -rw-r--r-- 1 boinc boinc      5654 Jun 15 17:52 queuedata.json
[2024-06-22 18:49:09] -rw-r--r-- 1 boinc boinc       100 Jun 22 10:06 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-22 18:49:09] -rwxr-xr-x 1 boinc boinc      7986 Jun 22 10:06 run_atlas
[2024-06-22 18:49:09] -rw-r--r-- 1 boinc boinc       105 Jun 22 10:06 job.xml
[2024-06-22 18:49:09] -rw-r--r-- 2 boinc boinc     17537 Jun 22 10:06 start_atlas.sh
[2024-06-22 18:49:09] drwxrwx--x 2 boinc boinc      4096 Jun 22 10:06 shared
[2024-06-22 18:49:09] -rw-r--r-- 2 boinc boinc    482525 Jun 22 10:06 input.tar.gz
[2024-06-22 18:49:09] -rw-r--r-- 1 boinc boinc      7599 Jun 22 10:06 init_data.xml
[2024-06-22 18:49:09] -rw-r--r-- 2 boinc boinc 544009940 Jun 22 10:06 EVNT.38776210._000559.pool.root.1
[2024-06-22 18:49:09] -rw-r--r-- 1 boinc boinc         0 Jun 22 10:06 boinc_lockfile
[2024-06-22 18:49:09] -rw-r--r-- 1 boinc boinc      2647 Jun 22 10:06 pandaJob.out
[2024-06-22 18:49:09] -rw------- 1 boinc boinc       460 Jun 22 10:06 setup.sh.local
[2024-06-22 18:49:09] -rw------- 1 boinc boinc   1025930 Jun 22 10:06 agis_schedconf.cvmfs.json
[2024-06-22 18:49:09] -rw------- 1 boinc boinc   1321363 Jun 22 10:06 cric_ddmendpoints.json
[2024-06-22 18:49:09] drwx------ 4 boinc boinc      4096 Jun 22 10:06 pilot3
[2024-06-22 18:49:09] -rw------- 1 boinc boinc 348744380 Jun 22 18:47 HITS.38921013._038566.pool.root.1
[2024-06-22 18:49:09] -rw-r--r-- 1 boinc boinc       533 Jun 22 18:47 boinc_task_state.xml
[2024-06-22 18:49:09] -rw------- 1 boinc boinc        95 Jun 22 18:48 pilot_heartbeat.json
[2024-06-22 18:49:09] -rw------- 1 boinc boinc      1032 Jun 22 18:48 memory_monitor_summary.json
[2024-06-22 18:49:09] -rw------- 1 boinc boinc         0 Jun 22 18:48 agis_ddmendpoints.agis.ALL.json
[2024-06-22 18:49:09] -rw------- 1 boinc boinc    649676 Jun 22 18:48 log.38921013._038566.job.log.tgz.1
[2024-06-22 18:49:09] -rw------- 1 boinc boinc      7698 Jun 22 18:48 heartbeat.json
[2024-06-22 18:49:09] -rw-r--r-- 1 boinc boinc      8192 Jun 22 18:49 boinc_mmap_file
[2024-06-22 18:49:09] -rw-r--r-- 1 boinc boinc        29 Jun 22 18:49 wrapper_checkpoint.txt
[2024-06-22 18:49:09] -rw------- 1 boinc boinc      4343 Jun 22 18:49 pilotlog.txt
[2024-06-22 18:49:09] -rw------- 1 boinc boinc   3675334 Jun 22 18:49 log.38921013._038566.job.log.1
[2024-06-22 18:49:09] -rw------- 1 boinc boinc       357 Jun 22 18:49 output.list
[2024-06-22 18:49:09] -rw-r--r-- 1 boinc boinc       620 Jun 22 18:49 runtime_log
[2024-06-22 18:49:09] -rw------- 1 boinc boinc   4341760 Jun 22 18:49 result.tar.gz
[2024-06-22 18:49:09] -rw-r--r-- 1 boinc boinc     11478 Jun 22 18:49 runtime_log.err
[2024-06-22 18:49:09] -rw------- 1 boinc boinc       645 Jun 22 18:49 0esNDmhUqc5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmMmUKDmhbDdDo.diag
[2024-06-22 18:49:09] -rw-r--r-- 1 boinc boinc     21380 Jun 22 18:49 stderr.txt
[2024-06-22 18:49:09] HITS file was successfully produced:
[2024-06-22 18:49:09] -rw------- 1 boinc boinc 348744380 Jun 22 18:47 shared/HITS.pool.root.1
[2024-06-22 18:49:09]  *** Contents of shared directory: ***
[2024-06-22 18:49:09] total 876572
[2024-06-22 18:49:09] -rw-r--r-- 2 boinc boinc     17537 Jun 22 10:06 start_atlas.sh
[2024-06-22 18:49:09] -rw-r--r-- 2 boinc boinc    482525 Jun 22 10:06 input.tar.gz
[2024-06-22 18:49:09] -rw-r--r-- 2 boinc boinc 544009940 Jun 22 10:06 ATLAS.root_0
[2024-06-22 18:49:09] -rw------- 1 boinc boinc 348744380 Jun 22 18:47 HITS.pool.root.1
[2024-06-22 18:49:09] -rw------- 1 boinc boinc   4341760 Jun 22 18:49 result.tar.gz
18:49:11 (3746645): run_atlas exited; CPU time 163378.509764
18:49:11 (3746645): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN