Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
11:14:44 (4077881): wrapper (7.7.26015): starting
11:14:44 (4077881): wrapper: running run_atlas (--nthreads 6)
[2024-06-18 11:14:44] Arguments: --nthreads 6
[2024-06-18 11:14:44] Threads: 6
[2024-06-18 11:14:44] Checking for CVMFS
[2024-06-18 11:14:44] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-18 11:14:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-18 11:14:44] Running cvmfs_config stat atlas.cern.ch
[2024-06-18 11:14:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-18 11:14:45] 2.11.2.0 9806 24824 69100 134003 0 56 4461184 6144001 915 130560 0 37771933 99.9823 3831679 3267 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.202:3128 1
[2024-06-18 11:14:45] CVMFS is ok
[2024-06-18 11:14:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-18 11:14:45] Checking for apptainer binary...
[2024-06-18 11:14:45] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-18 11:14:45] Running /usr/bin/apptainer --version
[2024-06-18 11:14:45] apptainer version 1.3.0
[2024-06-18 11:14:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-18 11:14:45] Ryzen5
[2024-06-18 11:14:45] apptainer works
[2024-06-18 11:14:45] Set ATHENA_PROC_NUMBER=6
[2024-06-18 11:14:45] Set ATHENA_CORE_NUMBER=6
[2024-06-18 11:14:45] Starting ATLAS job with PandaID=6231615610
[2024-06-18 11:14:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-18 16:09:39]  *** The last 200 lines of the pilot log: ***
[2024-06-18 16:09:39] 2024-06-18 14:09:22,882 | INFO     | monitor loop #1377: job 0:6231615610 is in state 'finished'
[2024-06-18 16:09:39] 2024-06-18 14:09:22,882 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-18 16:09:39] 2024-06-18 14:09:24,137 | INFO     | 17674s have passed since pilot start
[2024-06-18 16:09:39] 2024-06-18 14:09:25,385 | INFO     | monitor loop #1378: job 0:6231615610 is in state 'finished'
[2024-06-18 16:09:39] 2024-06-18 14:09:25,385 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-18 16:09:39] 2024-06-18 14:09:26,056 | INFO     | CPU arch script returned: x86-64-v3
[2024-06-18 16:09:39] 2024-06-18 14:09:26,057 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6231615610/memory_monitor_summary.json (trf name=prmon)
[2024-06-18 16:09:39] 2024-06-18 14:09:26,057 | INFO     | extracted standard info from prmon json
[2024-06-18 16:09:39] 2024-06-18 14:09:26,057 | INFO     | extracted standard memory fields from prmon json
[2024-06-18 16:09:39] 2024-06-18 14:09:26,057 | WARNING  | GPU info not found in prmon json
[2024-06-18 16:09:39] 2024-06-18 14:09:26,058 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-18 16:09:39] 2024-06-18 14:09:26,058 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-18 16:09:39] 2024-06-18 14:09:26,061 | INFO     | fitting pss+swap vs Time
[2024-06-18 16:09:39] 2024-06-18 14:09:26,061 | INFO     | model: linear, x: [1718702111.0, 1718702172.0, 1718702233.0, 1718702294.0, 1718702355.0, 1718702416.0, 1718702477.0, 1718702538.0, 1718702599.0, 1718702660.0, 1718
[2024-06-18 16:09:39] 2024-06-18 14:09:26,062 | INFO     | sum of square deviations: 7562532492.5
[2024-06-18 16:09:39] 2024-06-18 14:09:26,063 | INFO     | sum of deviations: -55749317243.50001
[2024-06-18 16:09:39] 2024-06-18 14:09:26,063 | INFO     | mean x: 1718710925.5
[2024-06-18 16:09:39] 2024-06-18 14:09:26,063 | INFO     | mean y: 2544126.3896551724
[2024-06-18 16:09:39] 2024-06-18 14:09:26,063 | INFO     | -- intersect: 12672501013.265009
[2024-06-18 16:09:39] 2024-06-18 14:09:26,063 | INFO     | intersect: 12672501013.265009
[2024-06-18 16:09:39] 2024-06-18 14:09:26,064 | INFO     | chi2: 2.9895585224642995
[2024-06-18 16:09:39] 2024-06-18 14:09:26,064 | INFO     | model: linear, x: [1718702111.0, 1718702172.0, 1718702233.0, 1718702294.0, 1718702355.0, 1718702416.0, 1718702477.0, 1718702538.0, 1718702599.0, 1718702660.0, 1718
[2024-06-18 16:09:39] 2024-06-18 14:09:26,064 | INFO     | sum of square deviations: 7178069470.0
[2024-06-18 16:09:39] 2024-06-18 14:09:26,066 | INFO     | sum of deviations: -36549764670.0
[2024-06-18 16:09:39] 2024-06-18 14:09:26,066 | INFO     | mean x: 1718710773.0
[2024-06-18 16:09:39] 2024-06-18 14:09:26,066 | INFO     | mean y: 2551641.2736842106
[2024-06-18 16:09:39] 2024-06-18 14:09:26,066 | INFO     | -- intersect: 8753995821.562983
[2024-06-18 16:09:39] 2024-06-18 14:09:26,066 | INFO     | intersect: 8753995821.562983
[2024-06-18 16:09:39] 2024-06-18 14:09:26,066 | INFO     | chi2: 2.334175230776371
[2024-06-18 16:09:39] 2024-06-18 14:09:26,066 | INFO     | current chi2=2.334175230776371 (change=21.922410508548758 %)
[2024-06-18 16:09:39] 2024-06-18 14:09:26,066 | INFO     | right removable region: 284
[2024-06-18 16:09:39] 2024-06-18 14:09:26,067 | INFO     | model: linear, x: [1718702416.0, 1718702477.0, 1718702538.0, 1718702599.0, 1718702660.0, 1718702721.0, 1718702782.0, 1718702843.0, 1718702904.0, 1718702965.0, 1718
[2024-06-18 16:09:39] 2024-06-18 14:09:26,067 | INFO     | sum of square deviations: 7178069470.0
[2024-06-18 16:09:39] 2024-06-18 14:09:26,068 | INFO     | sum of deviations: -117686735383.99991
[2024-06-18 16:09:39] 2024-06-18 14:09:26,068 | INFO     | mean x: 1718711078.0
[2024-06-18 16:09:39] 2024-06-18 14:09:26,068 | INFO     | mean y: 2568602.9754385967
[2024-06-18 16:09:39] 2024-06-18 14:09:26,068 | INFO     | -- intersect: 28181384186.120697
[2024-06-18 16:09:39] 2024-06-18 14:09:26,069 | INFO     | intersect: 28181384186.120697
[2024-06-18 16:09:39] 2024-06-18 14:09:26,069 | INFO     | chi2: 1.046646515669701
[2024-06-18 16:09:39] 2024-06-18 14:09:26,069 | INFO     | current chi2=1.046646515669701 (change=64.98993052636588 %)
[2024-06-18 16:09:39] 2024-06-18 14:09:26,069 | INFO     | model: linear, x: [1718702721.0, 1718702782.0, 1718702843.0, 1718702904.0, 1718702965.0, 1718703026.0, 1718703087.0, 1718703148.0, 1718703209.0, 1718703270.0, 1718
[2024-06-18 16:09:39] 2024-06-18 14:09:26,069 | INFO     | sum of square deviations: 6806862510.0
[2024-06-18 16:09:39] 2024-06-18 14:09:26,071 | INFO     | sum of deviations: -116397818163.49998
[2024-06-18 16:09:39] 2024-06-18 14:09:26,071 | INFO     | mean x: 1718711230.5
[2024-06-18 16:09:39] 2024-06-18 14:09:26,071 | INFO     | mean y: 2568061.725
[2024-06-18 16:09:39] 2024-06-18 14:09:26,071 | INFO     | -- intersect: 29392648585.520435
[2024-06-18 16:09:39] 2024-06-18 14:09:26,071 | INFO     | intersect: 29392648585.520435
[2024-06-18 16:09:39] 2024-06-18 14:09:26,071 | INFO     | chi2: 1.0339407529181308
[2024-06-18 16:09:39] 2024-06-18 14:09:26,071 | INFO     | current chi2=1.0339407529181308 (change=1.2139497491605615 %)
[2024-06-18 16:09:39] 2024-06-18 14:09:26,071 | INFO     | left removable region: 20
[2024-06-18 16:09:39] 2024-06-18 14:09:26,072 | INFO     | model: linear, x: [1718703331.0, 1718703392.0, 1718703453.0, 1718703514.0, 1718703575.0, 1718703636.0, 1718703697.0, 1718703758.0, 1718703819.0, 1718703880.0, 1718
[2024-06-18 16:09:39] 2024-06-18 14:09:26,072 | INFO     | sum of square deviations: 5705372090.0
[2024-06-18 16:09:39] 2024-06-18 14:09:26,073 | INFO     | sum of deviations: -76197684325.99998
[2024-06-18 16:09:39] 2024-06-18 14:09:26,073 | INFO     | mean x: 1718711352.5
[2024-06-18 16:09:39] 2024-06-18 14:09:26,073 | INFO     | mean y: 2567237.007575758
[2024-06-18 16:09:39] 2024-06-18 14:09:26,073 | INFO     | -- intersect: 22956692405.25887
[2024-06-18 16:09:39] 2024-06-18 14:09:26,073 | INFO     | intersect: 22956692405.25887
[2024-06-18 16:09:39] 2024-06-18 14:09:26,074 | INFO     | chi2: 0.3339073932382497
[2024-06-18 16:09:39] 2024-06-18 14:09:26,074 | INFO     | -- intersect: 22956692405.25887
[2024-06-18 16:09:39] 2024-06-18 14:09:26,074 | INFO     | current memory leak: -13.36 B/s (using 264 data points, chi2=0.33)
[2024-06-18 16:09:39] 2024-06-18 14:09:26,074 | INFO     | ..............................
[2024-06-18 16:09:39] 2024-06-18 14:09:26,074 | INFO     | . Timing measurements:
[2024-06-18 16:09:39] 2024-06-18 14:09:26,074 | INFO     | . get job = 0 s
[2024-06-18 16:09:39] 2024-06-18 14:09:26,074 | INFO     | . initial setup = 1 s
[2024-06-18 16:09:39] 2024-06-18 14:09:26,074 | INFO     | . payload setup = 3 s
[2024-06-18 16:09:39] 2024-06-18 14:09:26,074 | INFO     | . stage-in = 0 s
[2024-06-18 16:09:39] 2024-06-18 14:09:26,074 | INFO     | . payload execution = 17633 s
[2024-06-18 16:09:39] 2024-06-18 14:09:26,075 | INFO     | . stage-out = 0 s
[2024-06-18 16:09:39] 2024-06-18 14:09:26,075 | INFO     | . log creation = 0 s
[2024-06-18 16:09:39] 2024-06-18 14:09:26,075 | INFO     | ..............................
[2024-06-18 16:09:39] 2024-06-18 14:09:26,142 | INFO     | 
[2024-06-18 16:09:39] 2024-06-18 14:09:26,142 | INFO     | job summary report
[2024-06-18 16:09:39] 2024-06-18 14:09:26,142 | INFO     | --------------------------------------------------
[2024-06-18 16:09:39] 2024-06-18 14:09:26,142 | INFO     | PanDA job id: 6231615610
[2024-06-18 16:09:39] 2024-06-18 14:09:26,142 | INFO     | task id: 38921007
[2024-06-18 16:09:39] 2024-06-18 14:09:26,143 | INFO     | errors: (none)
[2024-06-18 16:09:39] 2024-06-18 14:09:26,143 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-18 16:09:39] 2024-06-18 14:09:26,143 | INFO     | pilot state: finished 
[2024-06-18 16:09:39] 2024-06-18 14:09:26,143 | INFO     | transexitcode: 0
[2024-06-18 16:09:39] 2024-06-18 14:09:26,143 | INFO     | exeerrorcode: 0
[2024-06-18 16:09:39] 2024-06-18 14:09:26,143 | INFO     | exeerrordiag: 
[2024-06-18 16:09:39] 2024-06-18 14:09:26,143 | INFO     | exitcode: 0
[2024-06-18 16:09:39] 2024-06-18 14:09:26,143 | INFO     | exitmsg: OK
[2024-06-18 16:09:39] 2024-06-18 14:09:26,143 | INFO     | cpuconsumptiontime: 101906 s
[2024-06-18 16:09:39] 2024-06-18 14:09:26,143 | INFO     | nevents: 400
[2024-06-18 16:09:39] 2024-06-18 14:09:26,143 | INFO     | neventsw: 0
[2024-06-18 16:09:39] 2024-06-18 14:09:26,143 | INFO     | pid: 4088550
[2024-06-18 16:09:39] 2024-06-18 14:09:26,143 | INFO     | pgrp: 4088550
[2024-06-18 16:09:39] 2024-06-18 14:09:26,143 | INFO     | corecount: 6
[2024-06-18 16:09:39] 2024-06-18 14:09:26,143 | INFO     | event service: False
[2024-06-18 16:09:39] 2024-06-18 14:09:26,143 | INFO     | sizes: {0: 2379108, 3: 2379314, 11: 2379342, 17639: 2411509, 17640: 2411508, 17642: 2420524, 17643: 2420708, 17661: 2420878}
[2024-06-18 16:09:39] 2024-06-18 14:09:26,143 | INFO     | --------------------------------------------------
[2024-06-18 16:09:39] 2024-06-18 14:09:26,144 | INFO     | 
[2024-06-18 16:09:39] 2024-06-18 14:09:26,144 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2024-06-18 16:09:39] 2024-06-18 14:09:26,160 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-18 16:09:39] 2024-06-18 14:09:26,160 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-18 16:09:39] 2024-06-18 14:09:26,161 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-18 16:09:39] 2024-06-18 14:09:26,161 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-18 16:09:39] 2024-06-18 14:09:26,161 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-18 16:09:39] 2024-06-18 14:09:26,161 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-18 16:09:39] 2024-06-18 14:09:26,161 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-18 16:09:39] 2024-06-18 14:09:26,161 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-18 16:09:39] 2024-06-18 14:09:26,161 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-18 16:09:39] 2024-06-18 14:09:26,161 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-18 16:09:39] 2024-06-18 14:09:26,161 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-18 16:09:39] 2024-06-18 14:09:26,161 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-18 16:09:39] 2024-06-18 14:09:26,161 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-18 16:09:39] 2024-06-18 14:09:26,161 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-18 16:09:39] 2024-06-18 14:09:26,161 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-18 16:09:39] 2024-06-18 14:09:26,161 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-18 16:09:39] 2024-06-18 14:09:26,161 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-18 16:09:39] 2024-06-18 14:09:26,161 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-18 16:09:39] 2024-06-18 14:09:26,162 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-18 16:09:39] 2024-06-18 14:09:26,162 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-18 16:09:39] 2024-06-18 14:09:26,162 | INFO     | job 6231615610 has completed (purged errors)
[2024-06-18 16:09:39] 2024-06-18 14:09:26,162 | INFO     | overall cleanup function is called
[2024-06-18 16:09:39] 2024-06-18 14:09:27,169 | INFO     | --- collectZombieJob: --- 10, [4088550]
[2024-06-18 16:09:39] 2024-06-18 14:09:27,169 | INFO     | zombie collector waiting for pid 4088550
[2024-06-18 16:09:39] 2024-06-18 14:09:27,169 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-18 16:09:39] 2024-06-18 14:09:28,173 | INFO     | collected zombie processes
[2024-06-18 16:09:39] 2024-06-18 14:09:28,173 | INFO     | will now attempt to kill all subprocesses of pid=4088550
[2024-06-18 16:09:39] 2024-06-18 14:09:28,226 | INFO     | process IDs to be killed: [4088550] (in reverse order)
[2024-06-18 16:09:39] 2024-06-18 14:09:28,263 | WARNING  | found no corresponding commands to process id(s)
[2024-06-18 16:09:39] 2024-06-18 14:09:28,263 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-18 16:09:39] 2024-06-18 14:09:28,265 | INFO     | did not find any defunct processes belonging to 4088550
[2024-06-18 16:09:39] 2024-06-18 14:09:28,267 | INFO     | did not find any defunct processes belonging to 4088550
[2024-06-18 16:09:39] 2024-06-18 14:09:28,267 | INFO     | ready for new job
[2024-06-18 16:09:39] 2024-06-18 14:09:28,267 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-18 16:09:39] 2024-06-18 14:09:28,269 | INFO     | *************************************
[2024-06-18 16:09:39] 2024-06-18 14:09:28,269 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-18 16:09:39] 2024-06-18 14:09:28,269 | INFO     | *************************************
[2024-06-18 16:09:39] 2024-06-18 14:09:28,269 | INFO     | 
[2024-06-18 16:09:39] 2024-06-18 14:09:28,269 | INFO     | architecture information:
[2024-06-18 16:09:39] 2024-06-18 14:09:28,270 | INFO     | executing command: cat /etc/os-release
[2024-06-18 16:09:39] 2024-06-18 14:09:28,283 | INFO     | cat /etc/os-release:
[2024-06-18 16:09:39] NAME="CentOS Linux"
[2024-06-18 16:09:39] VERSION="7 (Core)"
[2024-06-18 16:09:39] ID="centos"
[2024-06-18 16:09:39] ID_LIKE="rhel fedora"
[2024-06-18 16:09:39] VERSION_ID="7"
[2024-06-18 16:09:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-18 16:09:39] ANSI_COLOR="0;31"
[2024-06-18 16:09:39] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-18 16:09:39] HOME_URL="https://www.centos.org/"
[2024-06-18 16:09:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-18 16:09:39] 
[2024-06-18 16:09:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-18 16:09:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-18 16:09:39] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-18 16:09:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-18 16:09:39] 
[2024-06-18 16:09:39] 2024-06-18 14:09:28,283 | INFO     | *************************************
[2024-06-18 16:09:39] 2024-06-18 14:09:28,786 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2024-06-18 16:09:39] 2024-06-18 14:09:28,799 | INFO     | sufficient remaining disk space (405841903616 B)
[2024-06-18 16:09:39] 2024-06-18 14:09:28,799 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-18 16:09:39] 2024-06-18 14:09:28,799 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-18 16:09:39] 2024-06-18 14:09:28,799 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-18 16:09:39] 2024-06-18 14:09:28,893 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-18 16:09:39] 2024-06-18 14:09:28,894 | INFO     | aborting loop
[2024-06-18 16:09:39] 2024-06-18 14:09:29,149 | INFO     | found 0 job(s) in 20 queues
[2024-06-18 16:09:39] 2024-06-18 14:09:29,149 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-18 16:09:39] 2024-06-18 14:09:29,149 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-18 16:09:39] 2024-06-18 14:09:29,601 | INFO     | all payload control threads have been joined
[2024-06-18 16:09:39] 2024-06-18 14:09:29,789 | INFO     | all data control threads have been joined
[2024-06-18 16:09:39] 2024-06-18 14:09:29,805 | INFO     | [job] retrieve thread has finished
[2024-06-18 16:09:39] 2024-06-18 14:09:29,886 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-18 16:09:39] 2024-06-18 14:09:29,896 | INFO     | [job] job monitor thread has finished
[2024-06-18 16:09:39] 2024-06-18 14:09:30,086 | INFO     | [payload] validate_post thread has finished
[2024-06-18 16:09:39] 2024-06-18 14:09:30,415 | INFO     | all job control threads have been joined
[2024-06-18 16:09:39] 2024-06-18 14:09:30,486 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-18 16:09:39] 2024-06-18 14:09:30,606 | INFO     | [payload] control thread has finished
[2024-06-18 16:09:39] 2024-06-18 14:09:30,792 | INFO     | [data] control thread has finished
[2024-06-18 16:09:39] 2024-06-18 14:09:30,901 | INFO     | [payload] failed_post thread has finished
[2024-06-18 16:09:39] 2024-06-18 14:09:30,959 | INFO     | [job] validate thread has finished
[2024-06-18 16:09:39] 2024-06-18 14:09:31,043 | INFO     | [payload] execute_payloads thread has finished
[2024-06-18 16:09:39] 2024-06-18 14:09:31,149 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-18 16:09:39] 2024-06-18 14:09:31,159 | INFO     | [data] copytool_in thread has finished
[2024-06-18 16:09:39] 2024-06-18 14:09:31,239 | INFO     | [payload] validate_pre thread has finished
[2024-06-18 16:09:39] 2024-06-18 14:09:31,306 | INFO     | [job] create_data_payload thread has finished
[2024-06-18 16:09:39] 2024-06-18 14:09:31,419 | INFO     | [job] control thread has finished
[2024-06-18 16:09:39] 2024-06-18 14:09:31,891 | INFO     | [data] copytool_out thread has finished
[2024-06-18 16:09:39] 2024-06-18 14:09:32,154 | INFO     | [job] queue monitor thread has finished
[2024-06-18 16:09:39] 2024-06-18 14:09:32,805 | INFO     | [data] queue_monitor thread has finished
[2024-06-18 16:09:39] 2024-06-18 14:09:34,031 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140169897310016)>', '<ExcThread(monitor, started 140168606512896)>']
[2024-06-18 16:09:39] 2024-06-18 14:09:34,172 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-18 16:09:39] 2024-06-18 14:09:34,172 | INFO     | [monitor] control thread has ended
[2024-06-18 16:09:39] 2024-06-18 14:09:39,055 | INFO     | all workflow threads have been joined
[2024-06-18 16:09:39] 2024-06-18 14:09:39,056 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-18 16:09:39] 2024-06-18 14:09:39,056 | INFO     | traces error code: 0
[2024-06-18 16:09:39] 2024-06-18 14:09:39,056 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-18 16:09:39] 2024-06-18 14:09:39,124 [wrapper] ==== pilot stdout END ====
[2024-06-18 16:09:39] 2024-06-18 14:09:39,126 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-18 16:09:39] 2024-06-18 14:09:39,129 [wrapper] pilotpid: 4082087
[2024-06-18 16:09:39] 2024-06-18 14:09:39,131 [wrapper] Pilot exit status: 0
[2024-06-18 16:09:39] 2024-06-18 14:09:39,138 [wrapper] pandaids: 6231615610
[2024-06-18 16:09:39] 2024-06-18 14:09:39,160 [wrapper] cleanup supervisor_pilot 4164705 4082088
[2024-06-18 16:09:39] 2024-06-18 14:09:39,163 [wrapper] Test setup, not cleaning
[2024-06-18 16:09:39] 2024-06-18 14:09:39,165 [wrapper] ==== wrapper stdout END ====
[2024-06-18 16:09:39] 2024-06-18 14:09:39,167 [wrapper] ==== wrapper stderr END ====
[2024-06-18 16:09:39] 2024-06-18 14:09:39,171 [wrapper] apfmon messages muted
[2024-06-18 16:09:39]  *** Error codes and diagnostics ***
[2024-06-18 16:09:39]     "exeErrorCode": 0,
[2024-06-18 16:09:39]     "exeErrorDiag": "",
[2024-06-18 16:09:39]     "pilotErrorCode": 0,
[2024-06-18 16:09:39]     "pilotErrorDiag": "",
[2024-06-18 16:09:39]  *** Listing of results directory ***
[2024-06-18 16:09:39] insgesamt 928640
[2024-06-18 16:09:39] -rw-r--r-- 1 boinc boinc    469766 15. Jun 21:27 pilot3.tar.gz
[2024-06-18 16:09:39] -rw-r--r-- 1 boinc boinc      5654 15. Jun 21:31 queuedata.json
[2024-06-18 16:09:39] -rwx------ 1 boinc boinc     32308 15. Jun 21:33 runpilot2-wrapper.sh
[2024-06-18 16:09:39] -rw-r--r-- 1 boinc boinc       100 18. Jun 11:14 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-18 16:09:39] -rwxr-xr-x 1 boinc boinc      7986 18. Jun 11:14 run_atlas
[2024-06-18 16:09:39] -rw-r--r-- 1 boinc boinc       105 18. Jun 11:14 job.xml
[2024-06-18 16:09:39] -rw-r--r-- 2 boinc boinc     17537 18. Jun 11:14 start_atlas.sh
[2024-06-18 16:09:39] drwxrwx--x 2 boinc boinc      4096 18. Jun 11:14 shared
[2024-06-18 16:09:39] -rw-r--r-- 2 boinc boinc    482536 18. Jun 11:14 input.tar.gz
[2024-06-18 16:09:39] -rw-r--r-- 1 boinc boinc      6866 18. Jun 11:14 init_data.xml
[2024-06-18 16:09:39] -rw-r--r-- 2 boinc boinc 587556615 18. Jun 11:14 EVNT.38776201._000755.pool.root.1
[2024-06-18 16:09:39] -rw-r--r-- 1 boinc boinc         0 18. Jun 11:14 boinc_lockfile
[2024-06-18 16:09:39] -rw-r--r-- 1 boinc boinc      2631 18. Jun 11:14 pandaJob.out
[2024-06-18 16:09:39] -rw------- 1 boinc boinc       462 18. Jun 11:14 setup.sh.local
[2024-06-18 16:09:39] -rw------- 1 boinc boinc   1020167 18. Jun 11:14 agis_schedconf.cvmfs.json
[2024-06-18 16:09:39] -rw------- 1 boinc boinc   1316805 18. Jun 11:14 cric_ddmendpoints.json
[2024-06-18 16:09:39] drwx------ 4 boinc boinc      4096 18. Jun 11:14 pilot3
[2024-06-18 16:09:39] -rw------- 1 boinc boinc 355623283 18. Jun 16:08 HITS.38921007._043365.pool.root.1
[2024-06-18 16:09:39] -rw-r--r-- 1 boinc boinc       532 18. Jun 16:08 boinc_task_state.xml
[2024-06-18 16:09:39] -rw------- 1 boinc boinc      1018 18. Jun 16:09 memory_monitor_summary.json
[2024-06-18 16:09:39] -rw------- 1 boinc boinc         0 18. Jun 16:09 agis_ddmendpoints.agis.ALL.json
[2024-06-18 16:09:39] -rw------- 1 boinc boinc    386414 18. Jun 16:09 log.38921007._043365.job.log.tgz.1
[2024-06-18 16:09:39] -rw------- 1 boinc boinc        95 18. Jun 16:09 pilot_heartbeat.json
[2024-06-18 16:09:39] -rw------- 1 boinc boinc      7645 18. Jun 16:09 heartbeat.json
[2024-06-18 16:09:39] -rw-r--r-- 1 boinc boinc      8192 18. Jun 16:09 boinc_mmap_file
[2024-06-18 16:09:39] -rw-r--r-- 1 boinc boinc        29 18. Jun 16:09 wrapper_checkpoint.txt
[2024-06-18 16:09:39] -rw------- 1 boinc boinc      4212 18. Jun 16:09 pilotlog.txt
[2024-06-18 16:09:39] -rw------- 1 boinc boinc   1720105 18. Jun 16:09 log.38921007._043365.job.log.1
[2024-06-18 16:09:39] -rw------- 1 boinc boinc       357 18. Jun 16:09 output.list
[2024-06-18 16:09:39] -rw-r--r-- 1 boinc boinc       620 18. Jun 16:09 runtime_log
[2024-06-18 16:09:39] -rw------- 1 boinc boinc   2129920 18. Jun 16:09 result.tar.gz
[2024-06-18 16:09:39] -rw-r--r-- 1 boinc boinc     11327 18. Jun 16:09 runtime_log.err
[2024-06-18 16:09:39] -rw------- 1 boinc boinc       637 18. Jun 16:09 HTdMDmYKoc5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmKNgKDm4B6WWn.diag
[2024-06-18 16:09:39] -rw-r--r-- 1 boinc boinc     21290 18. Jun 16:09 stderr.txt
[2024-06-18 16:09:39] HITS file was successfully produced:
[2024-06-18 16:09:39] -rw------- 1 boinc boinc 355623283 18. Jun 16:08 shared/HITS.pool.root.1
[2024-06-18 16:09:39]  *** Contents of shared directory: ***
[2024-06-18 16:09:39] insgesamt 923660
[2024-06-18 16:09:39] -rw-r--r-- 2 boinc boinc     17537 18. Jun 11:14 start_atlas.sh
[2024-06-18 16:09:39] -rw-r--r-- 2 boinc boinc    482536 18. Jun 11:14 input.tar.gz
[2024-06-18 16:09:39] -rw-r--r-- 2 boinc boinc 587556615 18. Jun 11:14 ATLAS.root_0
[2024-06-18 16:09:39] -rw------- 1 boinc boinc 355623283 18. Jun 16:08 HITS.pool.root.1
[2024-06-18 16:09:39] -rw------- 1 boinc boinc   2129920 18. Jun 16:09 result.tar.gz
16:09:40 (4077881): run_atlas exited; CPU time 101845.012732
16:09:40 (4077881): called boinc_finish(0)

</stderr_txt>
]]>

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