Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2024-06-16 20:45:39 (863601): Detected: vboxwrapper 26206
2024-06-16 20:45:39 (863601): Detected: BOINC client v7.24.1
2024-06-16 20:45:40 (863601): Detected: VirtualBox VboxManage Interface (Version: 7.0.18)
2024-06-16 20:45:40 (863601): Successfully copied 'init_data.xml' to the shared directory.
2024-06-16 20:45:40 (863601): Create VM. (boinc_24ae174db0853ca8, slot#0)
2024-06-16 20:45:40 (863601): Setting Memory Size for VM. (4400MB)
2024-06-16 20:45:40 (863601): Setting CPU Count for VM. (4)
2024-06-16 20:45:40 (863601): Setting Chipset Options for VM.
2024-06-16 20:45:40 (863601): Setting Graphics Controller Options for VM.
2024-06-16 20:45:40 (863601): Setting Boot Options for VM.
2024-06-16 20:45:41 (863601): Setting Network Configuration for NAT.
2024-06-16 20:45:41 (863601): Enabling VM Network Access.
2024-06-16 20:45:41 (863601): Disabling USB Support for VM.
2024-06-16 20:45:41 (863601): Disabling COM Port Support for VM.
2024-06-16 20:45:41 (863601): Disabling LPT Port Support for VM.
2024-06-16 20:45:41 (863601): Disabling Audio Support for VM.
2024-06-16 20:45:41 (863601): Disabling Clipboard Support for VM.
2024-06-16 20:45:41 (863601): Disabling Drag and Drop Support for VM.
2024-06-16 20:45:41 (863601): Adding storage controller(s) to VM.
2024-06-16 20:45:41 (863601): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-06-16 20:45:43 (863601): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-06-16 20:45:43 (863601): forwarding host port 36185 to guest port 80
2024-06-16 20:45:43 (863601): Enabling remote desktop for VM.
2024-06-16 20:45:43 (863601): Required extension pack not installed, remote desktop not enabled.
2024-06-16 20:45:43 (863601): Enabling shared directory for VM.
2024-06-16 20:45:43 (863601): Starting VM using VBoxManage interface. (boinc_24ae174db0853ca8, slot#0)
2024-06-16 20:45:45 (863601): Successfully started VM. (PID = '863860')
2024-06-16 20:45:45 (863601): Reporting VM Process ID to BOINC.
2024-06-16 20:45:45 (863601): Guest Log: BIOS: VirtualBox 7.0.18
2024-06-16 20:45:45 (863601): Guest Log: CPUID EDX: 0x178bfbff
2024-06-16 20:45:45 (863601): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-06-16 20:45:45 (863601): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-06-16 20:45:45 (863601): VM state change detected. (old = 'poweredoff', new = 'running')
2024-06-16 20:45:45 (863601): Detected: Web Application Enabled (http://localhost:36185)
2024-06-16 20:45:46 (863601): VM state change detected. (old = 'running', new = 'paused')
2024-06-16 20:46:02 (863601): Preference change detected
2024-06-16 20:46:02 (863601): Setting CPU throttle for VM. (50%)
2024-06-16 20:46:02 (863601): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2024-06-16 20:46:03 (863601): VM state change detected. (old = 'paused', new = 'running')
2024-06-16 20:46:04 (863601): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-06-16 20:46:04 (863601): Guest Log: BIOS: Booting from Hard Disk...
2024-06-16 20:46:07 (863601): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-06-16 20:46:07 (863601): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-06-16 20:46:07 (863601): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-06-16 20:46:07 (863601): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-06-16 20:46:07 (863601): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-06-16 20:46:07 (863601): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-06-16 20:46:07 (863601): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-06-16 20:46:07 (863601): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-06-16 20:46:07 (863601): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-06-16 20:46:07 (863601): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-06-16 20:46:07 (863601): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-06-16 20:46:07 (863601): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-06-16 20:46:07 (863601): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-06-16 20:46:07 (863601): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-06-16 20:46:07 (863601): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-06-16 20:46:07 (863601): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-06-16 20:46:07 (863601): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-06-16 20:46:07 (863601): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-06-16 20:46:07 (863601): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-06-16 20:46:07 (863601): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-06-16 20:46:07 (863601): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-06-16 20:46:07 (863601): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-06-16 20:46:07 (863601): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-06-16 20:46:07 (863601): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-06-16 20:46:07 (863601): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-06-16 20:46:07 (863601): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-06-16 20:46:07 (863601): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-06-16 20:46:07 (863601): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-06-16 20:46:07 (863601): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-06-16 20:46:07 (863601): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-06-16 20:46:07 (863601): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-06-16 20:46:07 (863601): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-06-16 20:46:21 (863601): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-06-16 20:46:21 (863601): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-06-16 20:46:34 (863601): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-06-16 20:46:34 (863601): Guest Log: 00:00:00.000087 main     Log opened 2024-06-16T18:46:16.047911000Z
2024-06-16 20:46:34 (863601): Guest Log: 00:00:00.000147 main     OS Product: Linux
2024-06-16 20:46:34 (863601): Guest Log: 00:00:00.000165 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-06-16 20:46:34 (863601): Guest Log: 00:00:00.000184 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-06-16 20:46:34 (863601): Guest Log: 00:00:00.000197 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-06-16 20:46:34 (863601): Guest Log: 00:00:00.000198 main     Process ID: 1296
2024-06-16 20:46:34 (863601): Guest Log: 00:00:00.000198 main     Package type: LINUX_64BITS_GENERIC
2024-06-16 20:46:34 (863601): Guest Log: 00:00:00.001516 main     5.2.32 r132073 started. Verbose level = 0
2024-06-16 20:46:35 (863601): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-06-16 20:46:35 (863601): Guest Log: [INFO] Mounting shared directory
2024-06-16 20:46:35 (863601): Guest Log: [INFO] Checking for init_data.xml
2024-06-16 20:46:37 (863601): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-06-16 20:46:37 (863601): Guest Log: [INFO] Detected branch: prod
2024-06-16 20:46:37 (863601): Guest Log: This is the prod version of the ATLAS job wrapper
2024-06-16 20:46:37 (863601): Guest Log: Copying input files
2024-06-16 20:46:45 (863601): Guest Log: Copied input files into RunAtlas.
2024-06-16 20:46:45 (863601): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-06-16 20:46:45 (863601): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-06-16 20:46:45 (863601): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-06-16 20:46:45 (863601): Guest Log: Further information can be found at the LHC@home message board.
2024-06-16 20:46:59 (863601): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-06-16 20:46:59 (863601): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-06-16 20:46:59 (863601): Guest Log: 2.6.3.0 1570 0 30220 133948 3 1 3117205 4096000 0 65024 0 0 n/a 1 4 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
2024-06-16 20:47:02 (863601): Guest Log: copied the webapp to /var/www
2024-06-16 20:47:02 (863601): Guest Log: ATHENA_PROC_NUMBER=4
2024-06-16 20:47:02 (863601): Guest Log: ATHENA_CORE_NUMBER=4
2024-06-16 20:47:02 (863601): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-06-16 20:47:02 (863601): Guest Log:  *** Starting ATLAS job. (PandaID=6231578852 taskID=38921007) ***
2024-06-16 22:25:02 (863601): Status Report: Elapsed Time: '6000.000000'
2024-06-16 22:25:02 (863601): Status Report: CPU Time: '10447.940000'
2024-06-17 00:04:03 (863601): Status Report: Elapsed Time: '12000.000000'
2024-06-17 00:04:03 (863601): Status Report: CPU Time: '22785.020000'
2024-06-17 01:43:03 (863601): Status Report: Elapsed Time: '18000.000000'
2024-06-17 01:43:03 (863601): Status Report: CPU Time: '35163.590000'
2024-06-17 03:22:04 (863601): Status Report: Elapsed Time: '24000.000000'
2024-06-17 03:22:04 (863601): Status Report: CPU Time: '47537.740000'
2024-06-17 04:51:48 (863601): Guest Log:  *** Job finished ***
2024-06-17 04:51:48 (863601): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-06-17 04:51:48 (863601): Guest Log: 2024-06-17 02:51:32,949 | INFO     | [data] queue_monitor thread has finished
2024-06-17 04:51:48 (863601): Guest Log: 2024-06-17 02:51:36,460 | INFO     | job.realtimelogging is not enabled
2024-06-17 04:51:48 (863601): Guest Log: 2024-06-17 02:51:37,462 | INFO     | [payload] run_realtimelog thread has finished
2024-06-17 04:51:48 (863601): Guest Log: 2024-06-17 02:51:37,579 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139914251945792)>', '<ExcThread(monitor, started 139913659938560)>']
2024-06-17 04:51:48 (863601): Guest Log: 2024-06-17 02:51:37,760 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-06-17 04:51:48 (863601): Guest Log: 2024-06-17 02:51:37,760 | INFO     | [monitor] control thread has ended
2024-06-17 04:51:48 (863601): Guest Log: 2024-06-17 02:51:42,585 | INFO     | all workflow threads have been joined
2024-06-17 04:51:48 (863601): Guest Log: 2024-06-17 02:51:42,585 | INFO     | end of generic workflow (traces error code: 0)
2024-06-17 04:51:48 (863601): Guest Log: 2024-06-17 02:51:42,586 | INFO     | traces error code: 0
2024-06-17 04:51:48 (863601): Guest Log: 2024-06-17 02:51:42,586 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-06-17 04:51:48 (863601): Guest Log: 2024-06-17 02:51:42,658 [wrapper] ==== pilot stdout END ====
2024-06-17 04:51:48 (863601): Guest Log: 2024-06-17 02:51:42,662 [wrapper] ==== wrapper stdout RESUME ====
2024-06-17 04:51:48 (863601): Guest Log: 2024-06-17 02:51:42,665 [wrapper] pilotpid: 6450
2024-06-17 04:51:48 (863601): Guest Log: 2024-06-17 02:51:42,669 [wrapper] Pilot exit status: 0
2024-06-17 04:51:48 (863601): Guest Log: 2024-06-17 02:51:42,687 [wrapper] pandaids: 6231578852
2024-06-17 04:51:48 (863601): Guest Log: 2024-06-17 02:51:42,712 [wrapper] cleanup supervisor_pilot 30187 6451
2024-06-17 04:51:48 (863601): Guest Log: 2024-06-17 02:51:42,716 [wrapper] Test setup, not cleaning
2024-06-17 04:51:48 (863601): Guest Log: 2024-06-17 02:51:42,720 [wrapper] ==== wrapper stdout END ====
2024-06-17 04:51:48 (863601): Guest Log: 2024-06-17 02:51:42,724 [wrapper] ==== wrapper stderr END ====
2024-06-17 04:51:48 (863601): Guest Log: 2024-06-17 02:51:42,732 [wrapper] apfmon messages muted
2024-06-17 04:51:48 (863601): Guest Log:  *** Error codes and diagnostics ***
2024-06-17 04:51:48 (863601): Guest Log:     "exeErrorCode": 0,
2024-06-17 04:51:48 (863601): Guest Log:     "exeErrorDiag": "",
2024-06-17 04:51:48 (863601): Guest Log:     "pilotErrorCode": 0,
2024-06-17 04:51:48 (863601): Guest Log:     "pilotErrorDiag": "",
2024-06-17 04:51:48 (863601): Guest Log:  *** Listing of results directory ***
2024-06-17 04:51:48 (863601): Guest Log: total 353376
2024-06-17 04:51:48 (863601): Guest Log: -rw-r--r--. 1 atlas atlas    469766 Jun 15 18:21 pilot3.tar.gz
2024-06-17 04:51:48 (863601): Guest Log: -rw-r--r--. 1 atlas atlas      5654 Jun 15 18:26 queuedata.json
2024-06-17 04:51:48 (863601): Guest Log: -rwx------. 1 atlas atlas     32308 Jun 15 18:27 runpilot2-wrapper.sh
2024-06-17 04:51:48 (863601): Guest Log: -rw-r--r--. 1 atlas atlas      6656 Jun 16 18:46 init_data.xml
2024-06-17 04:51:48 (863601): Guest Log: -rw-r--r--. 1 atlas atlas    482540 Jun 16 18:46 input.tar.gz
2024-06-17 04:51:48 (863601): Guest Log: -rw-r--r--. 1 atlas atlas     17537 Jun 16 18:46 start_atlas.sh
2024-06-17 04:51:48 (863601): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun 16 18:46 EVNT.38776201._000916.pool.root.1 -> /data/./ATLAS.root_0
2024-06-17 04:51:48 (863601): Guest Log: -rw-r--r--. 1 atlas atlas      2631 Jun 16 18:46 pandaJob.out
2024-06-17 04:51:48 (863601): Guest Log: -rw-------. 1 atlas atlas       424 Jun 16 18:46 setup.sh.local
2024-06-17 04:51:48 (863601): Guest Log: -rw-------. 1 atlas atlas   1020964 Jun 16 18:47 agis_schedconf.cvmfs.json
2024-06-17 04:51:48 (863601): Guest Log: -rw-------. 1 atlas atlas   1316805 Jun 16 18:47 cric_ddmendpoints.json
2024-06-17 04:51:48 (863601): Guest Log: drwx------. 4 atlas atlas      4096 Jun 16 18:47 pilot3
2024-06-17 04:51:48 (863601): Guest Log: -rw-------. 1 atlas atlas 354420517 Jun 17 02:50 HITS.38921007._043180.pool.root.1
2024-06-17 04:51:48 (863601): Guest Log: -rw-------. 1 atlas atlas        95 Jun 17 02:50 pilot_heartbeat.json
2024-06-17 04:51:48 (863601): Guest Log: -rw-------. 1 atlas atlas      1033 Jun 17 02:51 memory_monitor_summary.json
2024-06-17 04:51:48 (863601): Guest Log: -rw-------. 1 atlas atlas         0 Jun 17 02:51 agis_ddmendpoints.agis.ALL.json
2024-06-17 04:51:48 (863601): Guest Log: -rw-------. 1 atlas atlas    385323 Jun 17 02:51 log.38921007._043180.job.log.tgz.1
2024-06-17 04:51:48 (863601): Guest Log: -rw-------. 1 atlas atlas      7747 Jun 17 02:51 heartbeat.json
2024-06-17 04:51:48 (863601): Guest Log: -rw-------. 1 atlas atlas      4343 Jun 17 02:51 pilotlog.txt
2024-06-17 04:51:48 (863601): Guest Log: -rw-------. 1 atlas atlas   1601654 Jun 17 02:51 log.38921007._043180.job.log.1
2024-06-17 04:51:48 (863601): Guest Log: -rw-------. 1 atlas atlas       357 Jun 17 02:51 output.list
2024-06-17 04:51:48 (863601): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun 17 02:51 runtime_log
2024-06-17 04:51:48 (863601): Guest Log: -rw-------. 1 atlas atlas   2007040 Jun 17 02:51 result.tar.gz
2024-06-17 04:51:48 (863601): Guest Log: -rw-r--r--. 1 atlas atlas     11012 Jun 17 02:51 runtime_log.err
2024-06-17 04:51:48 (863601): Guest Log: -rw-------. 1 atlas atlas       675 Jun 17 02:51 60vNDmTInc5n9Rq4apOajLDm4fhM0noT9bVo2ijZDm2fUKDm9EJiQn.diag
2024-06-17 04:51:48 (863601): Guest Log: Looking for outputfile HITS.38921007._043180.pool.root.1
2024-06-17 04:51:48 (863601): Guest Log: HITS file was successfully produced
2024-06-17 04:51:48 (863601): Guest Log: -rw-------. 1 atlas atlas 354420517 Jun 17 02:50 /home/atlas/RunAtlas/HITS.38921007._043180.pool.root.1
2024-06-17 04:51:48 (863601): Guest Log: Successfully finished the ATLAS job!
2024-06-17 04:51:48 (863601): Guest Log: Copying the results back to the shared directory!
2024-06-17 04:51:48 (863601): Guest Log:  *** Contents of shared directory: ***
2024-06-17 04:51:48 (863601): Guest Log: total 572176
2024-06-17 04:51:48 (863601): Guest Log: -rw-r--r--. 1 root root 583382520 Jun 16 18:45 ATLAS.root_0
2024-06-17 04:51:48 (863601): Guest Log: -rw-r--r--. 1 root root      6656 Jun 16 18:45 init_data.xml
2024-06-17 04:51:48 (863601): Guest Log: -rw-r--r--. 1 root root    482540 Jun 16 18:45 input.tar.gz
2024-06-17 04:51:48 (863601): Guest Log: -rw-r--r--. 1 root root   2007040 Jun 17  2024 result.tar.gz
2024-06-17 04:51:48 (863601): Guest Log: -rw-r--r--. 1 root root     17537 Jun 16 18:45 start_atlas.sh
2024-06-17 04:51:48 (863601): Guest Log:  *** Success! Shutting down the machine. ***
2024-06-17 04:51:48 (863601): VM Completion File Detected.
2024-06-17 04:51:48 (863601): Powering off VM.
2024-06-17 04:51:49 (863601): Successfully stopped VM.
2024-06-17 04:51:49 (863601): Deregistering VM. (boinc_24ae174db0853ca8, slot#0)
2024-06-17 04:51:49 (863601): Removing network bandwidth throttle group from VM.
2024-06-17 04:51:49 (863601): Removing VM from VirtualBox.
04:51:54 (863601): called boinc_finish(0)

</stderr_txt>
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