Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
09:25:18 (517716): wrapper (7.7.26015): starting
09:25:18 (517716): wrapper: running run_atlas (--nthreads 6)
[2024-06-19 09:25:18] Arguments: --nthreads 6
[2024-06-19 09:25:18] Threads: 6
[2024-06-19 09:25:18] Checking for CVMFS
[2024-06-19 09:25:18] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-19 09:25:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-19 09:25:18] Running cvmfs_config stat atlas.cern.ch
[2024-06-19 09:25:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-19 09:25:18] 2.10.1.0 2030 45944 58944 134043 2 55 4605513 6144001 0 130560 0 38072936 99.975 6932143 7014 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.202:3128 1
[2024-06-19 09:25:18] CVMFS is ok
[2024-06-19 09:25:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-19 09:25:18] Checking for apptainer binary...
[2024-06-19 09:25:18] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-19 09:25:18] Running /usr/bin/apptainer --version
[2024-06-19 09:25:18] apptainer version 1.3.0
[2024-06-19 09:25:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-19 09:25:18] Beta
[2024-06-19 09:25:18] apptainer works
[2024-06-19 09:25:19] Set ATHENA_PROC_NUMBER=6
[2024-06-19 09:25:19] Set ATHENA_CORE_NUMBER=6
[2024-06-19 09:25:19] Starting ATLAS job with PandaID=6231528753
[2024-06-19 09:25:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-19 13:44:45]  *** The last 200 lines of the pilot log: ***
[2024-06-19 13:44:45] 2024-06-19 11:44:21,492 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-19 13:44:45] 2024-06-19 11:44:23,995 | INFO     | monitor loop #1224: job 0:6231528753 is in state 'finished'
[2024-06-19 13:44:45] 2024-06-19 11:44:23,995 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-19 13:44:45] 2024-06-19 11:44:24,376 | INFO     | CPU arch script returned: x86-64-v3
[2024-06-19 13:44:45] 2024-06-19 11:44:24,376 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6231528753/memory_monitor_summary.json (trf name=prmon)
[2024-06-19 13:44:45] 2024-06-19 11:44:24,376 | INFO     | extracted standard info from prmon json
[2024-06-19 13:44:45] 2024-06-19 11:44:24,376 | INFO     | extracted standard memory fields from prmon json
[2024-06-19 13:44:45] 2024-06-19 11:44:24,377 | WARNING  | GPU info not found in prmon json
[2024-06-19 13:44:45] 2024-06-19 11:44:24,377 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-19 13:44:45] 2024-06-19 11:44:24,377 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-19 13:44:45] 2024-06-19 11:44:24,379 | INFO     | fitting pss+swap vs Time
[2024-06-19 13:44:45] 2024-06-19 11:44:24,379 | INFO     | model: linear, x: [1718781944.0, 1718782005.0, 1718782066.0, 1718782127.0, 1718782188.0, 1718782249.0, 1718782310.0, 1718782371.0, 1718782432.0, 1718782493.0, 1718
[2024-06-19 13:44:45] 2024-06-19 11:44:24,379 | INFO     | sum of square deviations: 5141528960.0
[2024-06-19 13:44:45] 2024-06-19 11:44:24,380 | INFO     | sum of deviations: -67551040222.0
[2024-06-19 13:44:45] 2024-06-19 11:44:24,380 | INFO     | mean x: 1718789691.0
[2024-06-19 13:44:45] 2024-06-19 11:44:24,380 | INFO     | mean y: 2574322.1725490196
[2024-06-19 13:44:45] 2024-06-19 11:44:24,380 | INFO     | -- intersect: 22584579101.91417
[2024-06-19 13:44:45] 2024-06-19 11:44:24,380 | INFO     | intersect: 22584579101.91417
[2024-06-19 13:44:45] 2024-06-19 11:44:24,380 | INFO     | chi2: 2.7678391861843945
[2024-06-19 13:44:45] 2024-06-19 11:44:24,380 | INFO     | model: linear, x: [1718781944.0, 1718782005.0, 1718782066.0, 1718782127.0, 1718782188.0, 1718782249.0, 1718782310.0, 1718782371.0, 1718782432.0, 1718782493.0, 1718
[2024-06-19 13:44:45] 2024-06-19 11:44:24,380 | INFO     | sum of square deviations: 4844974562.5
[2024-06-19 13:44:45] 2024-06-19 11:44:24,381 | INFO     | sum of deviations: -50322360194.5
[2024-06-19 13:44:45] 2024-06-19 11:44:24,381 | INFO     | mean x: 1718789538.5
[2024-06-19 13:44:45] 2024-06-19 11:44:24,381 | INFO     | mean y: 2583053.476
[2024-06-19 13:44:45] 2024-06-19 11:44:24,381 | INFO     | -- intersect: 17854801912.248478
[2024-06-19 13:44:45] 2024-06-19 11:44:24,381 | INFO     | intersect: 17854801912.248478
[2024-06-19 13:44:45] 2024-06-19 11:44:24,381 | INFO     | chi2: 2.116614346273237
[2024-06-19 13:44:45] 2024-06-19 11:44:24,381 | INFO     | current chi2=2.116614346273237 (change=23.528275889789093 %)
[2024-06-19 13:44:45] 2024-06-19 11:44:24,381 | INFO     | right removable region: 249
[2024-06-19 13:44:45] 2024-06-19 11:44:24,381 | INFO     | model: linear, x: [1718782249.0, 1718782310.0, 1718782371.0, 1718782432.0, 1718782493.0, 1718782554.0, 1718782615.0, 1718782676.0, 1718782737.0, 1718782798.0, 1718
[2024-06-19 13:44:45] 2024-06-19 11:44:24,381 | INFO     | sum of square deviations: 4844974562.5
[2024-06-19 13:44:45] 2024-06-19 11:44:24,382 | INFO     | sum of deviations: -115757036770.5
[2024-06-19 13:44:45] 2024-06-19 11:44:24,382 | INFO     | mean x: 1718789843.5
[2024-06-19 13:44:45] 2024-06-19 11:44:24,382 | INFO     | mean y: 2598964.956
[2024-06-19 13:44:45] 2024-06-19 11:44:24,382 | INFO     | -- intersect: 41068246792.037125
[2024-06-19 13:44:45] 2024-06-19 11:44:24,382 | INFO     | intersect: 41068246792.037125
[2024-06-19 13:44:45] 2024-06-19 11:44:24,382 | INFO     | chi2: 1.0370808669717477
[2024-06-19 13:44:45] 2024-06-19 11:44:24,383 | INFO     | current chi2=1.0370808669717477 (change=62.531028820304556 %)
[2024-06-19 13:44:45] 2024-06-19 11:44:24,383 | INFO     | model: linear, x: [1718782554.0, 1718782615.0, 1718782676.0, 1718782737.0, 1718782798.0, 1718782859.0, 1718782920.0, 1718782981.0, 1718783042.0, 1718783103.0, 1718
[2024-06-19 13:44:45] 2024-06-19 11:44:24,383 | INFO     | sum of square deviations: 4560048290.0
[2024-06-19 13:44:45] 2024-06-19 11:44:24,383 | INFO     | sum of deviations: -110075897327.0
[2024-06-19 13:44:45] 2024-06-19 11:44:24,383 | INFO     | mean x: 1718789996.0
[2024-06-19 13:44:45] 2024-06-19 11:44:24,384 | INFO     | mean y: 2595899.7224489795
[2024-06-19 13:44:45] 2024-06-19 11:44:24,384 | INFO     | -- intersect: 41492803698.89704
[2024-06-19 13:44:45] 2024-06-19 11:44:24,384 | INFO     | intersect: 41492803698.89704
[2024-06-19 13:44:45] 2024-06-19 11:44:24,384 | INFO     | chi2: 1.0282328624832142
[2024-06-19 13:44:45] 2024-06-19 11:44:24,384 | INFO     | current chi2=1.0282328624832142 (change=0.853164374189014 %)
[2024-06-19 13:44:45] 2024-06-19 11:44:24,384 | INFO     | left removable region: 20
[2024-06-19 13:44:45] 2024-06-19 11:44:24,384 | INFO     | model: linear, x: [1718783164.0, 1718783225.0, 1718783286.0, 1718783347.0, 1718783408.0, 1718783469.0, 1718783530.0, 1718783591.0, 1718783652.0, 1718783713.0, 1718
[2024-06-19 13:44:45] 2024-06-19 11:44:24,384 | INFO     | sum of square deviations: 3723716330.0
[2024-06-19 13:44:45] 2024-06-19 11:44:24,385 | INFO     | sum of deviations: -71293695222.0
[2024-06-19 13:44:45] 2024-06-19 11:44:24,385 | INFO     | mean x: 1718790118.0
[2024-06-19 13:44:45] 2024-06-19 11:44:24,385 | INFO     | mean y: 2593192.938864629
[2024-06-19 13:44:45] 2024-06-19 11:44:24,385 | INFO     | -- intersect: 32910282169.149742
[2024-06-19 13:44:45] 2024-06-19 11:44:24,385 | INFO     | intersect: 32910282169.149742
[2024-06-19 13:44:45] 2024-06-19 11:44:24,385 | INFO     | chi2: 0.3254122340800996
[2024-06-19 13:44:45] 2024-06-19 11:44:24,385 | INFO     | -- intersect: 32910282169.149742
[2024-06-19 13:44:45] 2024-06-19 11:44:24,385 | INFO     | current memory leak: -19.15 B/s (using 229 data points, chi2=0.33)
[2024-06-19 13:44:45] 2024-06-19 11:44:24,385 | INFO     | ..............................
[2024-06-19 13:44:45] 2024-06-19 11:44:24,385 | INFO     | . Timing measurements:
[2024-06-19 13:44:45] 2024-06-19 11:44:24,385 | INFO     | . get job = 0 s
[2024-06-19 13:44:45] 2024-06-19 11:44:24,385 | INFO     | . initial setup = 1 s
[2024-06-19 13:44:45] 2024-06-19 11:44:24,385 | INFO     | . payload setup = 3 s
[2024-06-19 13:44:45] 2024-06-19 11:44:24,385 | INFO     | . stage-in = 0 s
[2024-06-19 13:44:45] 2024-06-19 11:44:24,385 | INFO     | . payload execution = 15506 s
[2024-06-19 13:44:45] 2024-06-19 11:44:24,385 | INFO     | . stage-out = 0 s
[2024-06-19 13:44:45] 2024-06-19 11:44:24,385 | INFO     | . log creation = 0 s
[2024-06-19 13:44:45] 2024-06-19 11:44:24,386 | INFO     | ..............................
[2024-06-19 13:44:45] 2024-06-19 11:44:24,422 | INFO     | 
[2024-06-19 13:44:45] 2024-06-19 11:44:24,422 | INFO     | job summary report
[2024-06-19 13:44:45] 2024-06-19 11:44:24,422 | INFO     | --------------------------------------------------
[2024-06-19 13:44:45] 2024-06-19 11:44:24,422 | INFO     | PanDA job id: 6231528753
[2024-06-19 13:44:45] 2024-06-19 11:44:24,422 | INFO     | task id: 38921007
[2024-06-19 13:44:45] 2024-06-19 11:44:24,422 | INFO     | errors: (none)
[2024-06-19 13:44:45] 2024-06-19 11:44:24,422 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-19 13:44:45] 2024-06-19 11:44:24,423 | INFO     | pilot state: finished 
[2024-06-19 13:44:45] 2024-06-19 11:44:24,423 | INFO     | transexitcode: 0
[2024-06-19 13:44:45] 2024-06-19 11:44:24,423 | INFO     | exeerrorcode: 0
[2024-06-19 13:44:45] 2024-06-19 11:44:24,423 | INFO     | exeerrordiag: 
[2024-06-19 13:44:45] 2024-06-19 11:44:24,423 | INFO     | exitcode: 0
[2024-06-19 13:44:45] 2024-06-19 11:44:24,423 | INFO     | exitmsg: OK
[2024-06-19 13:44:45] 2024-06-19 11:44:24,423 | INFO     | cpuconsumptiontime: 90156 s
[2024-06-19 13:44:45] 2024-06-19 11:44:24,423 | INFO     | nevents: 400
[2024-06-19 13:44:45] 2024-06-19 11:44:24,423 | INFO     | neventsw: 0
[2024-06-19 13:44:45] 2024-06-19 11:44:24,423 | INFO     | pid: 528348
[2024-06-19 13:44:45] 2024-06-19 11:44:24,423 | INFO     | pgrp: 528348
[2024-06-19 13:44:45] 2024-06-19 11:44:24,423 | INFO     | corecount: 6
[2024-06-19 13:44:45] 2024-06-19 11:44:24,423 | INFO     | event service: False
[2024-06-19 13:44:45] 2024-06-19 11:44:24,423 | INFO     | sizes: {0: 2381226, 2: 2381432, 11: 2381460, 15513: 2412851, 15516: 2421811, 15519: 2421867, 15526: 2422165}
[2024-06-19 13:44:45] 2024-06-19 11:44:24,423 | INFO     | --------------------------------------------------
[2024-06-19 13:44:45] 2024-06-19 11:44:24,423 | INFO     | 
[2024-06-19 13:44:45] 2024-06-19 11:44:24,423 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2024-06-19 13:44:45] 2024-06-19 11:44:24,435 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-19 13:44:45] 2024-06-19 11:44:24,436 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-19 13:44:45] 2024-06-19 11:44:24,436 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-19 13:44:45] 2024-06-19 11:44:24,436 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-19 13:44:45] 2024-06-19 11:44:24,436 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-19 13:44:45] 2024-06-19 11:44:24,436 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-19 13:44:45] 2024-06-19 11:44:24,436 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-19 13:44:45] 2024-06-19 11:44:24,436 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-19 13:44:45] 2024-06-19 11:44:24,436 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-19 13:44:45] 2024-06-19 11:44:24,436 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-19 13:44:45] 2024-06-19 11:44:24,436 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-19 13:44:45] 2024-06-19 11:44:24,436 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-19 13:44:45] 2024-06-19 11:44:24,436 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-19 13:44:45] 2024-06-19 11:44:24,436 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-19 13:44:45] 2024-06-19 11:44:24,436 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-19 13:44:45] 2024-06-19 11:44:24,436 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-19 13:44:45] 2024-06-19 11:44:24,436 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-19 13:44:45] 2024-06-19 11:44:24,436 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-19 13:44:45] 2024-06-19 11:44:24,436 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-19 13:44:45] 2024-06-19 11:44:24,436 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-19 13:44:45] 2024-06-19 11:44:24,436 | INFO     | job 6231528753 has completed (purged errors)
[2024-06-19 13:44:45] 2024-06-19 11:44:24,437 | INFO     | overall cleanup function is called
[2024-06-19 13:44:45] 2024-06-19 11:44:25,443 | INFO     | --- collectZombieJob: --- 10, [528348]
[2024-06-19 13:44:45] 2024-06-19 11:44:25,444 | INFO     | zombie collector waiting for pid 528348
[2024-06-19 13:44:45] 2024-06-19 11:44:25,444 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-19 13:44:45] 2024-06-19 11:44:26,449 | INFO     | collected zombie processes
[2024-06-19 13:44:45] 2024-06-19 11:44:26,450 | INFO     | will now attempt to kill all subprocesses of pid=528348
[2024-06-19 13:44:45] 2024-06-19 11:44:26,491 | INFO     | process IDs to be killed: [528348] (in reverse order)
[2024-06-19 13:44:45] 2024-06-19 11:44:26,514 | WARNING  | found no corresponding commands to process id(s)
[2024-06-19 13:44:45] 2024-06-19 11:44:26,515 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-19 13:44:45] 2024-06-19 11:44:26,516 | INFO     | did not find any defunct processes belonging to 528348
[2024-06-19 13:44:45] 2024-06-19 11:44:26,518 | INFO     | did not find any defunct processes belonging to 528348
[2024-06-19 13:44:45] 2024-06-19 11:44:26,518 | INFO     | ready for new job
[2024-06-19 13:44:45] 2024-06-19 11:44:26,518 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-19 13:44:45] 2024-06-19 11:44:26,519 | INFO     | *************************************
[2024-06-19 13:44:45] 2024-06-19 11:44:26,519 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-19 13:44:45] 2024-06-19 11:44:26,519 | INFO     | *************************************
[2024-06-19 13:44:45] 2024-06-19 11:44:26,520 | INFO     | 
[2024-06-19 13:44:45] 2024-06-19 11:44:26,520 | INFO     | architecture information:
[2024-06-19 13:44:45] 2024-06-19 11:44:26,520 | INFO     | executing command: cat /etc/os-release
[2024-06-19 13:44:45] 2024-06-19 11:44:26,528 | INFO     | cat /etc/os-release:
[2024-06-19 13:44:45] NAME="CentOS Linux"
[2024-06-19 13:44:45] VERSION="7 (Core)"
[2024-06-19 13:44:45] ID="centos"
[2024-06-19 13:44:45] ID_LIKE="rhel fedora"
[2024-06-19 13:44:45] VERSION_ID="7"
[2024-06-19 13:44:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-19 13:44:45] ANSI_COLOR="0;31"
[2024-06-19 13:44:45] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-19 13:44:45] HOME_URL="https://www.centos.org/"
[2024-06-19 13:44:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-19 13:44:45] 
[2024-06-19 13:44:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-19 13:44:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-19 13:44:45] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-19 13:44:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-19 13:44:45] 
[2024-06-19 13:44:45] 2024-06-19 11:44:26,528 | INFO     | *************************************
[2024-06-19 13:44:45] 2024-06-19 11:44:27,029 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2024-06-19 13:44:45] 2024-06-19 11:44:27,042 | INFO     | sufficient remaining disk space (279916314624 B)
[2024-06-19 13:44:45] 2024-06-19 11:44:27,043 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-19 13:44:45] 2024-06-19 11:44:27,043 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-19 13:44:45] 2024-06-19 11:44:27,043 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-19 13:44:45] 2024-06-19 11:44:27,043 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-19 13:44:45] 2024-06-19 11:44:27,044 | INFO     | found 0 job(s) in 20 queues
[2024-06-19 13:44:45] 2024-06-19 11:44:27,044 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-19 13:44:45] 2024-06-19 11:44:27,044 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-19 13:44:45] 2024-06-19 11:44:27,122 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-19 13:44:45] 2024-06-19 11:44:27,504 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-19 13:44:45] 2024-06-19 11:44:27,504 | INFO     | aborting loop
[2024-06-19 13:44:45] 2024-06-19 11:44:27,855 | INFO     | all data control threads have been joined
[2024-06-19 13:44:45] 2024-06-19 11:44:28,049 | INFO     | [job] retrieve thread has finished
[2024-06-19 13:44:45] 2024-06-19 11:44:28,199 | INFO     | all job control threads have been joined
[2024-06-19 13:44:45] 2024-06-19 11:44:28,239 | INFO     | [payload] validate_post thread has finished
[2024-06-19 13:44:45] 2024-06-19 11:44:28,296 | INFO     | all payload control threads have been joined
[2024-06-19 13:44:45] 2024-06-19 11:44:28,510 | INFO     | [job] job monitor thread has finished
[2024-06-19 13:44:45] 2024-06-19 11:44:28,698 | INFO     | [payload] execute_payloads thread has finished
[2024-06-19 13:44:45] 2024-06-19 11:44:28,771 | INFO     | [data] copytool_in thread has finished
[2024-06-19 13:44:45] 2024-06-19 11:44:28,840 | INFO     | [payload] failed_post thread has finished
[2024-06-19 13:44:45] 2024-06-19 11:44:28,861 | INFO     | [data] control thread has finished
[2024-06-19 13:44:45] 2024-06-19 11:44:29,049 | INFO     | [data] copytool_out thread has finished
[2024-06-19 13:44:45] 2024-06-19 11:44:29,202 | INFO     | [job] control thread has finished
[2024-06-19 13:44:45] 2024-06-19 11:44:29,267 | INFO     | [job] create_data_payload thread has finished
[2024-06-19 13:44:45] 2024-06-19 11:44:29,302 | INFO     | [payload] control thread has finished
[2024-06-19 13:44:45] 2024-06-19 11:44:29,378 | INFO     | [payload] validate_pre thread has finished
[2024-06-19 13:44:45] 2024-06-19 11:44:29,434 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-19 13:44:45] 2024-06-19 11:44:29,444 | INFO     | [job] validate thread has finished
[2024-06-19 13:44:45] 2024-06-19 11:44:30,440 | INFO     | [job] queue monitor thread has finished
[2024-06-19 13:44:45] 2024-06-19 11:44:31,129 | INFO     | [data] queue_monitor thread has finished
[2024-06-19 13:44:45] 2024-06-19 11:44:37,848 | INFO     | job.realtimelogging is not enabled
[2024-06-19 13:44:45] 2024-06-19 11:44:38,854 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-19 13:44:45] 2024-06-19 11:44:40,232 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139657812453184)>', '<ExcThread(monitor, started 139656498771712)>']
[2024-06-19 13:44:45] 2024-06-19 11:44:41,115 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-19 13:44:45] 2024-06-19 11:44:41,115 | INFO     | [monitor] control thread has ended
[2024-06-19 13:44:45] 2024-06-19 11:44:45,258 | INFO     | all workflow threads have been joined
[2024-06-19 13:44:45] 2024-06-19 11:44:45,258 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-19 13:44:45] 2024-06-19 11:44:45,258 | INFO     | traces error code: 0
[2024-06-19 13:44:45] 2024-06-19 11:44:45,259 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-19 13:44:45] 2024-06-19 11:44:45,323 [wrapper] ==== pilot stdout END ====
[2024-06-19 13:44:45] 2024-06-19 11:44:45,325 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-19 13:44:45] 2024-06-19 11:44:45,327 [wrapper] pilotpid: 521905
[2024-06-19 13:44:45] 2024-06-19 11:44:45,328 [wrapper] Pilot exit status: 0
[2024-06-19 13:44:45] 2024-06-19 11:44:45,334 [wrapper] pandaids: 6231528753
[2024-06-19 13:44:45] 2024-06-19 11:44:45,348 [wrapper] cleanup supervisor_pilot  557994 521906
[2024-06-19 13:44:45] 2024-06-19 11:44:45,350 [wrapper] Test setup, not cleaning
[2024-06-19 13:44:45] 2024-06-19 11:44:45,351 [wrapper] ==== wrapper stdout END ====
[2024-06-19 13:44:45] 2024-06-19 11:44:45,353 [wrapper] ==== wrapper stderr END ====
[2024-06-19 13:44:45] 2024-06-19 11:44:45,356 [wrapper] apfmon messages muted
[2024-06-19 13:44:45]  *** Error codes and diagnostics ***
[2024-06-19 13:44:45]     "exeErrorCode": 0,
[2024-06-19 13:44:45]     "exeErrorDiag": "",
[2024-06-19 13:44:45]     "pilotErrorCode": 0,
[2024-06-19 13:44:45]     "pilotErrorDiag": "",
[2024-06-19 13:44:45]  *** Listing of results directory ***
[2024-06-19 13:44:45] insgesamt 918400
[2024-06-19 13:44:45] -rw-r--r-- 1 boinc boinc    469766 15. Jun 18:11 pilot3.tar.gz
[2024-06-19 13:44:45] -rw-r--r-- 1 boinc boinc      5654 15. Jun 18:26 queuedata.json
[2024-06-19 13:44:45] -rwx------ 1 boinc boinc     32308 15. Jun 18:28 runpilot2-wrapper.sh
[2024-06-19 13:44:45] -rw-r--r-- 1 boinc boinc       100 19. Jun 09:25 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-19 13:44:45] -rwxr-xr-x 1 boinc boinc      7986 19. Jun 09:25 run_atlas
[2024-06-19 13:44:45] -rw-r--r-- 1 boinc boinc       105 19. Jun 09:25 job.xml
[2024-06-19 13:44:45] -rw-r--r-- 1 boinc boinc      6703 19. Jun 09:25 init_data.xml
[2024-06-19 13:44:45] -rw-r--r-- 2 boinc boinc 583688197 19. Jun 09:25 EVNT.38776201._000906.pool.root.1
[2024-06-19 13:44:45] drwxrwx--x 2 boinc boinc      4096 19. Jun 09:25 shared
[2024-06-19 13:44:45] -rw-r--r-- 2 boinc boinc    482541 19. Jun 09:25 input.tar.gz
[2024-06-19 13:44:45] -rw-r--r-- 2 boinc boinc     17537 19. Jun 09:25 start_atlas.sh
[2024-06-19 13:44:45] -rw-r--r-- 1 boinc boinc         0 19. Jun 09:25 boinc_lockfile
[2024-06-19 13:44:45] -rw-r--r-- 1 boinc boinc      2631 19. Jun 09:25 pandaJob.out
[2024-06-19 13:44:45] -rw------- 1 boinc boinc       462 19. Jun 09:25 setup.sh.local
[2024-06-19 13:44:45] -rw------- 1 boinc boinc   1012093 19. Jun 09:25 agis_schedconf.cvmfs.json
[2024-06-19 13:44:45] -rw------- 1 boinc boinc   1317943 19. Jun 09:25 cric_ddmendpoints.json
[2024-06-19 13:44:45] drwx------ 4 boinc boinc      4096 19. Jun 09:25 pilot3
[2024-06-19 13:44:45] -rw------- 1 boinc boinc 349434866 19. Jun 13:43 HITS.38921007._042893.pool.root.1
[2024-06-19 13:44:45] -rw------- 1 boinc boinc        95 19. Jun 13:43 pilot_heartbeat.json
[2024-06-19 13:44:45] -rw-r--r-- 1 boinc boinc       531 19. Jun 13:44 boinc_task_state.xml
[2024-06-19 13:44:45] -rw------- 1 boinc boinc      1018 19. Jun 13:44 memory_monitor_summary.json
[2024-06-19 13:44:45] -rw------- 1 boinc boinc         0 19. Jun 13:44 agis_ddmendpoints.agis.ALL.json
[2024-06-19 13:44:45] -rw------- 1 boinc boinc    382470 19. Jun 13:44 log.38921007._042893.job.log.tgz.1
[2024-06-19 13:44:45] -rw------- 1 boinc boinc      7667 19. Jun 13:44 heartbeat.json
[2024-06-19 13:44:45] -rw-r--r-- 1 boinc boinc        28 19. Jun 13:44 wrapper_checkpoint.txt
[2024-06-19 13:44:45] -rw-r--r-- 1 boinc boinc      8192 19. Jun 13:44 boinc_mmap_file
[2024-06-19 13:44:45] -rw------- 1 boinc boinc      4407 19. Jun 13:44 pilotlog.txt
[2024-06-19 13:44:45] -rw------- 1 boinc boinc   1511885 19. Jun 13:44 log.38921007._042893.job.log.1
[2024-06-19 13:44:45] -rw------- 1 boinc boinc       357 19. Jun 13:44 output.list
[2024-06-19 13:44:45] -rw-r--r-- 1 boinc boinc       620 19. Jun 13:44 runtime_log
[2024-06-19 13:44:45] -rw------- 1 boinc boinc   1914880 19. Jun 13:44 result.tar.gz
[2024-06-19 13:44:45] -rw-r--r-- 1 boinc boinc     11317 19. Jun 13:44 runtime_log.err
[2024-06-19 13:44:45] -rw------- 1 boinc boinc       632 19. Jun 13:44 QGVNDmpRlc5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmREgKDmG6ak0m.diag
[2024-06-19 13:44:45] -rw-r--r-- 1 boinc boinc     21260 19. Jun 13:44 stderr.txt
[2024-06-19 13:44:45] HITS file was successfully produced:
[2024-06-19 13:44:45] -rw------- 1 boinc boinc 349434866 19. Jun 13:43 shared/HITS.pool.root.1
[2024-06-19 13:44:45]  *** Contents of shared directory: ***
[2024-06-19 13:44:45] insgesamt 913632
[2024-06-19 13:44:45] -rw-r--r-- 2 boinc boinc 583688197 19. Jun 09:25 ATLAS.root_0
[2024-06-19 13:44:45] -rw-r--r-- 2 boinc boinc    482541 19. Jun 09:25 input.tar.gz
[2024-06-19 13:44:45] -rw-r--r-- 2 boinc boinc     17537 19. Jun 09:25 start_atlas.sh
[2024-06-19 13:44:45] -rw------- 1 boinc boinc 349434866 19. Jun 13:43 HITS.pool.root.1
[2024-06-19 13:44:45] -rw------- 1 boinc boinc   1914880 19. Jun 13:44 result.tar.gz
13:44:47 (517716): run_atlas exited; CPU time 90139.441461
13:44:47 (517716): called boinc_finish(0)

</stderr_txt>
]]>

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