Stderr output

<core_client_version>8.0.0</core_client_version>
<![CDATA[
<stderr_txt>
21:39:57 (2842): wrapper (7.15.26016): starting
21:39:57 (2842): wrapper (7.15.26016): starting
21:39:57 (2842): wrapper: running run_atlas (--nthreads 2)
[2024-06-15 21:39:57] Arguments: --nthreads 2
[2024-06-15 21:39:57] Threads: 2
[2024-06-15 21:39:57] Checking for CVMFS
[2024-06-15 21:39:58] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-15 21:39:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-15 21:39:58] Running cvmfs_config stat atlas.cern.ch
[2024-06-15 21:39:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-15 21:39:59] 2.11.3.0 2626 9231 58216 133914 0 56 4205270 6291457 9999 130560 0 31848797 99.998 1381092 3060 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.0.2.157:7028 1
[2024-06-15 21:39:59] CVMFS is ok
[2024-06-15 21:39:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-15 21:39:59] Checking for apptainer binary...
[2024-06-15 21:39:59] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-15 21:39:59] Running /usr/bin/apptainer --version
[2024-06-15 21:39:59] apptainer version 1.3.0-2.1
[2024-06-15 21:39:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-15 21:40:00] b4
[2024-06-15 21:40:00] apptainer works
[2024-06-15 21:40:00] Set ATHENA_PROC_NUMBER=2
[2024-06-15 21:40:00] Set ATHENA_CORE_NUMBER=2
[2024-06-15 21:40:00] Starting ATLAS job with PandaID=6231401322
[2024-06-15 21:40:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc4/BOINC_ATLAS/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-15 21:40:00] Starting apptainer container.
[2024-06-15 21:40:00] To get some details on systemd level run
[2024-06-15 21:40:00] systemctl status ATLAS_boinc4_3_8IGMDmxrhc5n9Rq4apOajLDm4fhM0noT9bVo2ijZDm8UUKDmj8jAtm_0.scope
[2024-06-15 21:40:00] ----,^^^^,<<<~_____---,^^^,<<~____--,^^,<~__;_
[2024-06-16 21:01:18] Container ATLAS_boinc4_3_8IGMDmxrhc5n9Rq4apOajLDm4fhM0noT9bVo2ijZDm8UUKDmj8jAtm_0 finished with status code 0.
[2024-06-16 21:01:18]  *** The last 200 lines of the pilot log: ***
[2024-06-16 21:01:18] 2024-06-16 19:01:01,153 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-16 21:01:18] 2024-06-16 19:01:01,153 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-16 21:01:18] 2024-06-16 19:01:01,180 | INFO     | fitting pss+swap vs Time
[2024-06-16 21:01:18] 2024-06-16 19:01:01,181 | INFO     | model: linear, x: [1718480598.0, 1718480659.0, 1718480720.0, 1718480781.0, 1718480842.0, 1718480903.0, 1718480964.0, 1718481025.0, 1718481086.0, 1718481147.0, 1718
[2024-06-16 21:01:18] 2024-06-16 19:01:01,182 | INFO     | sum of square deviations: 806095114000.0
[2024-06-16 21:01:18] 2024-06-16 19:01:01,223 | INFO     | sum of deviations: 556937546309.9996
[2024-06-16 21:01:18] 2024-06-16 19:01:01,223 | INFO     | mean x: 1718522505.0
[2024-06-16 21:01:18] 2024-06-16 19:01:01,224 | INFO     | mean y: 2291132.6552727274
[2024-06-16 21:01:18] 2024-06-16 19:01:01,224 | INFO     | -- intersect: -1185049778.5975575
[2024-06-16 21:01:18] 2024-06-16 19:01:01,224 | INFO     | intersect: -1185049778.5975575
[2024-06-16 21:01:18] 2024-06-16 19:01:01,225 | INFO     | chi2: 5.587016658155273
[2024-06-16 21:01:18] 2024-06-16 19:01:01,226 | INFO     | model: linear, x: [1718480598.0, 1718480659.0, 1718480720.0, 1718480781.0, 1718480842.0, 1718480903.0, 1718480964.0, 1718481025.0, 1718481086.0, 1718481147.0, 1718
[2024-06-16 21:01:18] 2024-06-16 19:01:01,227 | INFO     | sum of square deviations: 797333284602.5
[2024-06-16 21:01:18] 2024-06-16 19:01:01,276 | INFO     | sum of deviations: 638722486229.9999
[2024-06-16 21:01:18] 2024-06-16 19:01:01,277 | INFO     | mean x: 1718522352.5
[2024-06-16 21:01:18] 2024-06-16 19:01:01,277 | INFO     | mean y: 2292551.8496350367
[2024-06-16 21:01:18] 2024-06-16 19:01:01,277 | INFO     | -- intersect: -1374369994.1995387
[2024-06-16 21:01:18] 2024-06-16 19:01:01,277 | INFO     | intersect: -1374369994.1995387
[2024-06-16 21:01:18] 2024-06-16 19:01:01,278 | INFO     | chi2: 4.830522021635064
[2024-06-16 21:01:18] 2024-06-16 19:01:01,278 | INFO     | current chi2=4.830522021635064 (change=13.540225182897329 %)
[2024-06-16 21:01:18] 2024-06-16 19:01:01,278 | INFO     | right removable region: 1369
[2024-06-16 21:01:18] 2024-06-16 19:01:01,279 | INFO     | model: linear, x: [1718480903.0, 1718480964.0, 1718481025.0, 1718481086.0, 1718481147.0, 1718481208.0, 1718481269.0, 1718481330.0, 1718481391.0, 1718481452.0, 1718
[2024-06-16 21:01:18] 2024-06-16 19:01:01,280 | INFO     | sum of square deviations: 797333284602.5
[2024-06-16 21:01:18] 2024-06-16 19:01:01,319 | INFO     | sum of deviations: 158086603961.5
[2024-06-16 21:01:18] 2024-06-16 19:01:01,319 | INFO     | mean x: 1718522657.5
[2024-06-16 21:01:18] 2024-06-16 19:01:01,319 | INFO     | mean y: 2298072.409489051
[2024-06-16 21:01:18] 2024-06-16 19:01:01,320 | INFO     | -- intersect: -338431978.62620455
[2024-06-16 21:01:18] 2024-06-16 19:01:01,320 | INFO     | intersect: -338431978.62620455
[2024-06-16 21:01:18] 2024-06-16 19:01:01,321 | INFO     | chi2: 1.9944064007901947
[2024-06-16 21:01:18] 2024-06-16 19:01:01,321 | INFO     | current chi2=1.9944064007901947 (change=64.30283776084696 %)
[2024-06-16 21:01:18] 2024-06-16 19:01:01,322 | INFO     | model: linear, x: [1718481208.0, 1718481269.0, 1718481330.0, 1718481391.0, 1718481452.0, 1718481513.0, 1718481574.0, 1718481635.0, 1718481696.0, 1718481757.0, 1718
[2024-06-16 21:01:18] 2024-06-16 19:01:01,323 | INFO     | sum of square deviations: 788635177330.0
[2024-06-16 21:01:18] 2024-06-16 19:01:01,360 | INFO     | sum of deviations: -8587648807.999954
[2024-06-16 21:01:18] 2024-06-16 19:01:01,361 | INFO     | mean x: 1718522810.0
[2024-06-16 21:01:18] 2024-06-16 19:01:01,361 | INFO     | mean y: 2300992.4505494507
[2024-06-16 21:01:18] 2024-06-16 19:01:01,361 | INFO     | -- intersect: 21014423.939596254
[2024-06-16 21:01:18] 2024-06-16 19:01:01,361 | INFO     | intersect: 21014423.939596254
[2024-06-16 21:01:18] 2024-06-16 19:01:01,362 | INFO     | chi2: 1.2857327953336923
[2024-06-16 21:01:18] 2024-06-16 19:01:01,363 | INFO     | current chi2=1.2857327953336923 (change=35.533059118528804 %)
[2024-06-16 21:01:18] 2024-06-16 19:01:01,364 | INFO     | model: linear, x: [1718481513.0, 1718481574.0, 1718481635.0, 1718481696.0, 1718481757.0, 1718481818.0, 1718481879.0, 1718481940.0, 1718482001.0, 1718482062.0, 1718
[2024-06-16 21:01:18] 2024-06-16 19:01:01,364 | INFO     | sum of square deviations: 780000559620.0
[2024-06-16 21:01:18] 2024-06-16 19:01:01,422 | INFO     | sum of deviations: 38088826512.0
[2024-06-16 21:01:18] 2024-06-16 19:01:01,422 | INFO     | mean x: 1718522962.5
[2024-06-16 21:01:18] 2024-06-16 19:01:01,422 | INFO     | mean y: 2300167.5
[2024-06-16 21:01:18] 2024-06-16 19:01:01,422 | INFO     | -- intersect: -81618391.49108565
[2024-06-16 21:01:18] 2024-06-16 19:01:01,422 | INFO     | intersect: -81618391.49108565
[2024-06-16 21:01:18] 2024-06-16 19:01:01,424 | INFO     | chi2: 1.2275337395731858
[2024-06-16 21:01:18] 2024-06-16 19:01:01,424 | INFO     | current chi2=1.2275337395731858 (change=4.526528060241465 %)
[2024-06-16 21:01:18] 2024-06-16 19:01:01,424 | INFO     | left removable region: 30
[2024-06-16 21:01:18] 2024-06-16 19:01:01,429 | INFO     | model: linear, x: [1718482428.0, 1718482489.0, 1718482550.0, 1718482611.0, 1718482672.0, 1718482733.0, 1718482794.0, 1718482855.0, 1718482916.0, 1718482977.0, 1718
[2024-06-16 21:01:18] 2024-06-16 19:01:01,429 | INFO     | sum of square deviations: 744423222790.0
[2024-06-16 21:01:18] 2024-06-16 19:01:01,482 | INFO     | sum of deviations: 326301336640.0002
[2024-06-16 21:01:18] 2024-06-16 19:01:01,482 | INFO     | mean x: 1718523237.0
[2024-06-16 21:01:18] 2024-06-16 19:01:01,482 | INFO     | mean y: 2297913.057505601
[2024-06-16 21:01:18] 2024-06-16 19:01:01,482 | INFO     | -- intersect: -750978465.3692161
[2024-06-16 21:01:18] 2024-06-16 19:01:01,482 | INFO     | intersect: -750978465.3692161
[2024-06-16 21:01:18] 2024-06-16 19:01:01,484 | INFO     | chi2: 0.1203527118967743
[2024-06-16 21:01:18] 2024-06-16 19:01:01,484 | INFO     | -- intersect: -750978465.3692161
[2024-06-16 21:01:18] 2024-06-16 19:01:01,484 | INFO     | current memory leak: 0.44 B/s (using 1339 data points, chi2=0.12)
[2024-06-16 21:01:18] 2024-06-16 19:01:01,486 | INFO     | ..............................
[2024-06-16 21:01:18] 2024-06-16 19:01:01,486 | INFO     | . Timing measurements:
[2024-06-16 21:01:18] 2024-06-16 19:01:01,486 | INFO     | . get job = 0 s
[2024-06-16 21:01:18] 2024-06-16 19:01:01,486 | INFO     | . initial setup = 1 s
[2024-06-16 21:01:18] 2024-06-16 19:01:01,486 | INFO     | . payload setup = 46 s
[2024-06-16 21:01:18] 2024-06-16 19:01:01,486 | INFO     | . stage-in = 0 s
[2024-06-16 21:01:18] 2024-06-16 19:01:01,486 | INFO     | . payload execution = 83851 s
[2024-06-16 21:01:18] 2024-06-16 19:01:01,486 | INFO     | . stage-out = 2 s
[2024-06-16 21:01:18] 2024-06-16 19:01:01,486 | INFO     | . log creation = 1 s
[2024-06-16 21:01:18] 2024-06-16 19:01:01,486 | INFO     | ..............................
[2024-06-16 21:01:18] 2024-06-16 19:01:01,601 | INFO     | 
[2024-06-16 21:01:18] 2024-06-16 19:01:01,601 | INFO     | job summary report
[2024-06-16 21:01:18] 2024-06-16 19:01:01,601 | INFO     | --------------------------------------------------
[2024-06-16 21:01:18] 2024-06-16 19:01:01,601 | INFO     | PanDA job id: 6231401322
[2024-06-16 21:01:18] 2024-06-16 19:01:01,601 | INFO     | task id: 38921007
[2024-06-16 21:01:18] 2024-06-16 19:01:01,601 | INFO     | errors: (none)
[2024-06-16 21:01:18] 2024-06-16 19:01:01,601 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-16 21:01:18] 2024-06-16 19:01:01,602 | INFO     | pilot state: finished 
[2024-06-16 21:01:18] 2024-06-16 19:01:01,602 | INFO     | transexitcode: 0
[2024-06-16 21:01:18] 2024-06-16 19:01:01,602 | INFO     | exeerrorcode: 0
[2024-06-16 21:01:18] 2024-06-16 19:01:01,602 | INFO     | exeerrordiag: 
[2024-06-16 21:01:18] 2024-06-16 19:01:01,602 | INFO     | exitcode: 0
[2024-06-16 21:01:18] 2024-06-16 19:01:01,602 | INFO     | exitmsg: OK
[2024-06-16 21:01:18] 2024-06-16 19:01:01,602 | INFO     | cpuconsumptiontime: 138776 s
[2024-06-16 21:01:18] 2024-06-16 19:01:01,602 | INFO     | nevents: 400
[2024-06-16 21:01:18] 2024-06-16 19:01:01,602 | INFO     | neventsw: 0
[2024-06-16 21:01:18] 2024-06-16 19:01:01,602 | INFO     | pid: 16865
[2024-06-16 21:01:18] 2024-06-16 19:01:01,602 | INFO     | pgrp: 16865
[2024-06-16 21:01:18] 2024-06-16 19:01:01,602 | INFO     | corecount: 2
[2024-06-16 21:01:18] 2024-06-16 19:01:01,603 | INFO     | event service: False
[2024-06-16 21:01:18] 2024-06-16 19:01:01,603 | INFO     | sizes: {0: 2378262, 1: 2379197, 12: 2379197, 23: 2379225, 31: 2379459, 33: 2379487, 83901: 2441553, 83904: 2450533, 83908: 2450589, 83935: 2450759}
[2024-06-16 21:01:18] 2024-06-16 19:01:01,603 | INFO     | --------------------------------------------------
[2024-06-16 21:01:18] 2024-06-16 19:01:01,603 | INFO     | 
[2024-06-16 21:01:18] 2024-06-16 19:01:01,603 | INFO     | executing command: ls -lF /home/boinc4/BOINC_ATLAS/slots/3
[2024-06-16 21:01:18] 2024-06-16 19:01:01,755 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-16 21:01:18] 2024-06-16 19:01:01,756 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-16 21:01:18] 2024-06-16 19:01:01,756 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-16 21:01:18] 2024-06-16 19:01:01,756 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-16 21:01:18] 2024-06-16 19:01:01,756 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-16 21:01:18] 2024-06-16 19:01:01,756 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-16 21:01:18] 2024-06-16 19:01:01,756 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-16 21:01:18] 2024-06-16 19:01:01,756 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-16 21:01:18] 2024-06-16 19:01:01,756 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-16 21:01:18] 2024-06-16 19:01:01,756 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-16 21:01:18] 2024-06-16 19:01:01,756 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-16 21:01:18] 2024-06-16 19:01:01,756 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-16 21:01:18] 2024-06-16 19:01:01,757 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-16 21:01:18] 2024-06-16 19:01:01,757 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-16 21:01:18] 2024-06-16 19:01:01,757 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-16 21:01:18] 2024-06-16 19:01:01,757 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-16 21:01:18] 2024-06-16 19:01:01,757 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-16 21:01:18] 2024-06-16 19:01:01,757 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-16 21:01:18] 2024-06-16 19:01:01,757 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-16 21:01:18] 2024-06-16 19:01:01,757 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-16 21:01:18] 2024-06-16 19:01:01,757 | INFO     | job 6231401322 has completed (purged errors)
[2024-06-16 21:01:18] 2024-06-16 19:01:01,757 | INFO     | overall cleanup function is called
[2024-06-16 21:01:18] 2024-06-16 19:01:02,765 | INFO     | --- collectZombieJob: --- 10, [16865]
[2024-06-16 21:01:18] 2024-06-16 19:01:02,765 | INFO     | zombie collector waiting for pid 16865
[2024-06-16 21:01:18] 2024-06-16 19:01:02,765 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-16 21:01:18] 2024-06-16 19:01:03,771 | INFO     | collected zombie processes
[2024-06-16 21:01:18] 2024-06-16 19:01:03,771 | INFO     | will now attempt to kill all subprocesses of pid=16865
[2024-06-16 21:01:18] 2024-06-16 19:01:04,188 | INFO     | process IDs to be killed: [16865] (in reverse order)
[2024-06-16 21:01:18] 2024-06-16 19:01:04,411 | WARNING  | found no corresponding commands to process id(s)
[2024-06-16 21:01:18] 2024-06-16 19:01:04,412 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-16 21:01:18] 2024-06-16 19:01:04,447 | INFO     | did not find any defunct processes belonging to 16865
[2024-06-16 21:01:18] 2024-06-16 19:01:04,459 | INFO     | did not find any defunct processes belonging to 16865
[2024-06-16 21:01:18] 2024-06-16 19:01:04,460 | INFO     | ready for new job
[2024-06-16 21:01:18] 2024-06-16 19:01:04,460 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-16 21:01:18] 2024-06-16 19:01:04,471 | INFO     | *************************************
[2024-06-16 21:01:18] 2024-06-16 19:01:04,471 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-16 21:01:18] 2024-06-16 19:01:04,471 | INFO     | *************************************
[2024-06-16 21:01:18] 2024-06-16 19:01:04,471 | INFO     | 
[2024-06-16 21:01:18] 2024-06-16 19:01:04,473 | INFO     | architecture information:
[2024-06-16 21:01:18] 2024-06-16 19:01:04,474 | INFO     | executing command: cat /etc/os-release
[2024-06-16 21:01:18] 2024-06-16 19:01:04,562 | INFO     | cat /etc/os-release:
[2024-06-16 21:01:18] NAME="CentOS Linux"
[2024-06-16 21:01:18] VERSION="7 (Core)"
[2024-06-16 21:01:18] ID="centos"
[2024-06-16 21:01:18] ID_LIKE="rhel fedora"
[2024-06-16 21:01:18] VERSION_ID="7"
[2024-06-16 21:01:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-16 21:01:18] ANSI_COLOR="0;31"
[2024-06-16 21:01:18] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-16 21:01:18] HOME_URL="https://www.centos.org/"
[2024-06-16 21:01:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-16 21:01:18] 
[2024-06-16 21:01:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-16 21:01:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-16 21:01:18] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-16 21:01:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-16 21:01:18] 
[2024-06-16 21:01:18] 2024-06-16 19:01:04,562 | INFO     | *************************************
[2024-06-16 21:01:18] 2024-06-16 19:01:05,064 | INFO     | executing command: df -mP /home/boinc4/BOINC_ATLAS/slots/3
[2024-06-16 21:01:18] 2024-06-16 19:01:05,116 | INFO     | sufficient remaining disk space (98299805696 B)
[2024-06-16 21:01:18] 2024-06-16 19:01:05,117 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-16 21:01:18] 2024-06-16 19:01:05,117 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-16 21:01:18] 2024-06-16 19:01:05,117 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-16 21:01:18] 2024-06-16 19:01:05,117 | INFO     | found 0 job(s) in 20 queues
[2024-06-16 21:01:18] 2024-06-16 19:01:05,117 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-16 21:01:18] 2024-06-16 19:01:05,117 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-16 21:01:18] 2024-06-16 19:01:05,118 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-16 21:01:18] 2024-06-16 19:01:05,334 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-16 21:01:18] 2024-06-16 19:01:05,334 | INFO     | aborting loop
[2024-06-16 21:01:18] 2024-06-16 19:01:05,344 | INFO     | all payload control threads have been joined
[2024-06-16 21:01:18] 2024-06-16 19:01:05,404 | INFO     | all job control threads have been joined
[2024-06-16 21:01:18] 2024-06-16 19:01:06,124 | INFO     | [job] retrieve thread has finished
[2024-06-16 21:01:18] 2024-06-16 19:01:06,187 | INFO     | all data control threads have been joined
[2024-06-16 21:01:18] 2024-06-16 19:01:06,338 | INFO     | [job] job monitor thread has finished
[2024-06-16 21:01:18] 2024-06-16 19:01:06,354 | INFO     | [payload] control thread has finished
[2024-06-16 21:01:18] 2024-06-16 19:01:06,411 | INFO     | [job] control thread has finished
[2024-06-16 21:01:18] 2024-06-16 19:01:06,418 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-16 21:01:18] 2024-06-16 19:01:06,431 | INFO     | [payload] validate_post thread has finished
[2024-06-16 21:01:18] 2024-06-16 19:01:06,594 | INFO     | [job] validate thread has finished
[2024-06-16 21:01:18] 2024-06-16 19:01:06,601 | INFO     | [payload] execute_payloads thread has finished
[2024-06-16 21:01:18] 2024-06-16 19:01:06,618 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-16 21:01:18] 2024-06-16 19:01:06,871 | INFO     | [job] create_data_payload thread has finished
[2024-06-16 21:01:18] 2024-06-16 19:01:06,886 | INFO     | [payload] validate_pre thread has finished
[2024-06-16 21:01:18] 2024-06-16 19:01:07,124 | INFO     | [data] copytool_out thread has finished
[2024-06-16 21:01:18] 2024-06-16 19:01:07,191 | INFO     | [data] control thread has finished
[2024-06-16 21:01:18] 2024-06-16 19:01:07,211 | INFO     | [payload] failed_post thread has finished
[2024-06-16 21:01:18] 2024-06-16 19:01:07,424 | INFO     | [data] copytool_in thread has finished
[2024-06-16 21:01:18] 2024-06-16 19:01:07,621 | INFO     | [job] queue monitor thread has finished
[2024-06-16 21:01:18] 2024-06-16 19:01:07,857 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-16 21:01:18] 2024-06-16 19:01:11,874 | INFO     | [data] queue_monitor thread has finished
[2024-06-16 21:01:18] 2024-06-16 19:01:12,401 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140298575271744)>', '<ExcThread(monitor, started 140298046932736)>']
[2024-06-16 21:01:18] 2024-06-16 19:01:13,171 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-16 21:01:18] 2024-06-16 19:01:13,171 | INFO     | [monitor] control thread has ended
[2024-06-16 21:01:18] 2024-06-16 19:01:17,427 | INFO     | all workflow threads have been joined
[2024-06-16 21:01:18] 2024-06-16 19:01:17,428 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-16 21:01:18] 2024-06-16 19:01:17,428 | INFO     | traces error code: 0
[2024-06-16 21:01:18] 2024-06-16 19:01:17,428 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-16 21:01:18] 2024-06-16 19:01:17,678 [wrapper] ==== pilot stdout END ====
[2024-06-16 21:01:18] 2024-06-16 19:01:17,721 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-16 21:01:18] 2024-06-16 19:01:17,755 [wrapper] pilotpid: 8119
[2024-06-16 21:01:18] 2024-06-16 19:01:17,785 [wrapper] Pilot exit status: 0
[2024-06-16 21:01:18] 2024-06-16 19:01:17,875 [wrapper] pandaids: 6231401322
[2024-06-16 21:01:18] 2024-06-16 19:01:18,136 [wrapper] cleanup supervisor_pilot  1041 8120
[2024-06-16 21:01:18] 2024-06-16 19:01:18,148 [wrapper] Test setup, not cleaning
[2024-06-16 21:01:18] 2024-06-16 19:01:18,157 [wrapper] ==== wrapper stdout END ====
[2024-06-16 21:01:18] 2024-06-16 19:01:18,172 [wrapper] ==== wrapper stderr END ====
[2024-06-16 21:01:18] 2024-06-16 19:01:18,200 [wrapper] apfmon messages muted
[2024-06-16 21:01:18]  *** Error codes and diagnostics ***
[2024-06-16 21:01:18]     "exeErrorCode": 0,
[2024-06-16 21:01:18]     "exeErrorDiag": "",
[2024-06-16 21:01:18]     "pilotErrorCode": 0,
[2024-06-16 21:01:18]     "pilotErrorDiag": "",
[2024-06-16 21:01:18]  *** Listing of results directory ***
[2024-06-16 21:01:18] total 943792
[2024-06-16 21:01:18] -rw-r--r-- 1 boinc4 boinc    469766 Jun 15 14:27 pilot3.tar.gz
[2024-06-16 21:01:18] -rwx------ 1 boinc4 boinc     32308 Jun 15 14:39 runpilot2-wrapper.sh
[2024-06-16 21:01:18] -rw-r--r-- 1 boinc4 boinc      5654 Jun 15 14:39 queuedata.json
[2024-06-16 21:01:18] -rw-r--r-- 1 boinc4 boinc       100 Jun 15 21:39 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-16 21:01:18] -rwxr-xr-x 1 boinc4 boinc      9754 Jun 15 21:39 run_atlas
[2024-06-16 21:01:18] -rw-r--r-- 1 boinc4 boinc       105 Jun 15 21:39 job.xml
[2024-06-16 21:01:18] -rw-r--r-- 1 boinc4 boinc      6685 Jun 15 21:39 init_data.xml
[2024-06-16 21:01:18] -rw-r--r-- 2 boinc4 boinc 586392775 Jun 15 21:39 EVNT.38776201._000819.pool.root.1
[2024-06-16 21:01:18] -rw-r--r-- 2 boinc4 boinc     17537 Jun 15 21:39 start_atlas.sh
[2024-06-16 21:01:18] drwxrwx--x 2 boinc4 boinc       100 Jun 15 21:39 shared
[2024-06-16 21:01:18] -rw-r--r-- 2 boinc4 boinc    482531 Jun 15 21:39 input.tar.gz
[2024-06-16 21:01:18] -rw-r--r-- 1 boinc4 boinc      8192 Jun 15 21:39 boinc_mmap_file
[2024-06-16 21:01:18] -rw-r--r-- 1 boinc4 boinc         0 Jun 15 21:39 boinc_lockfile
[2024-06-16 21:01:18] -rw-r--r-- 1 boinc4 boinc      2632 Jun 15 21:40 pandaJob.out
[2024-06-16 21:01:18] -rw------- 1 boinc4 boinc       452 Jun 15 21:40 setup.sh.local
[2024-06-16 21:01:18] -rw------- 1 boinc4 boinc   1020872 Jun 15 21:41 agis_schedconf.cvmfs.json
[2024-06-16 21:01:18] drwx------ 4 boinc4 boinc       400 Jun 15 21:41 pilot3
[2024-06-16 21:01:18] -rw------- 1 boinc4 boinc 350290140 Jun 16 20:59 HITS.38921007._042020.pool.root.1
[2024-06-16 21:01:18] -rw------- 1 boinc4 boinc        95 Jun 16 21:00 pilot_heartbeat.json
[2024-06-16 21:01:18] -rw------- 1 boinc4 boinc      1019 Jun 16 21:00 memory_monitor_summary.json
[2024-06-16 21:01:18] -rw-r--r-- 1 boinc4 boinc         0 Jun 16 21:00 agis_ddmendpoints.agis.ALL.json
[2024-06-16 21:01:18] -rw------- 1 boinc4 boinc   1316805 Jun 16 21:00 cric_ddmendpoints.json
[2024-06-16 21:01:18] -rw------- 1 boinc4 boinc   1243707 Jun 16 21:00 log.38921007._042020.job.log.tgz.1
[2024-06-16 21:01:18] -rw------- 1 boinc4 boinc      7653 Jun 16 21:01 heartbeat.json
[2024-06-16 21:01:18] -rw------- 1 boinc4 boinc      4344 Jun 16 21:01 pilotlog.txt
[2024-06-16 21:01:18] -rw------- 1 boinc4 boinc  11881651 Jun 16 21:01 log.38921007._042020.job.log.1
[2024-06-16 21:01:18] -rw------- 1 boinc4 boinc       357 Jun 16 21:01 output.list
[2024-06-16 21:01:18] -rw-r--r-- 1 boinc4 boinc       620 Jun 16 21:01 runtime_log
[2024-06-16 21:01:18] -rw------- 1 boinc4 boinc  13148160 Jun 16 21:01 result.tar.gz
[2024-06-16 21:01:18] -rw-r--r-- 1 boinc4 boinc     11451 Jun 16 21:01 runtime_log.err
[2024-06-16 21:01:18] -rw------- 1 boinc4 boinc       635 Jun 16 21:01 8IGMDmxrhc5n9Rq4apOajLDm4fhM0noT9bVo2ijZDm8UUKDmj8jAtm.diag
[2024-06-16 21:01:18] -rw-r--r-- 1 boinc4 boinc     21752 Jun 16 21:01 stderr.txt
[2024-06-16 21:01:18] HITS file was successfully produced:
[2024-06-16 21:01:18] -rw------- 1 boinc4 boinc 350290140 Jun 16 20:59 shared/HITS.pool.root.1
[2024-06-16 21:01:18]  *** Contents of shared directory: ***
[2024-06-16 21:01:18] total 928068
[2024-06-16 21:01:18] -rw-r--r-- 2 boinc4 boinc 586392775 Jun 15 21:39 ATLAS.root_0
[2024-06-16 21:01:18] -rw-r--r-- 2 boinc4 boinc     17537 Jun 15 21:39 start_atlas.sh
[2024-06-16 21:01:18] -rw-r--r-- 2 boinc4 boinc    482531 Jun 15 21:39 input.tar.gz
[2024-06-16 21:01:18] -rw------- 1 boinc4 boinc 350290140 Jun 16 20:59 HITS.pool.root.1
[2024-06-16 21:01:18] -rw------- 1 boinc4 boinc  13148160 Jun 16 21:01 result.tar.gz
21:01:20 (2842): run_atlas exited; CPU time 138463.796831
21:01:20 (2842): called boinc_finish(0)

</stderr_txt>
]]>

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