Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
16:12:19 (321288): wrapper (7.7.26015): starting
16:12:19 (321288): wrapper: running run_atlas (--nthreads 4)
[2024-06-15 16:12:19] Arguments: --nthreads 4
[2024-06-15 16:12:19] Threads: 4
[2024-06-15 16:12:19] Checking for CVMFS
[2024-06-15 16:12:19] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-15 16:12:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-15 16:12:19] Running cvmfs_config stat atlas.cern.ch
[2024-06-15 16:12:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-15 16:12:19] 2.11.3.0 3707 216 46640 133914 0 189 2459579 4096000 6467 130560 0 1367441 99.999 4705 1206 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2024-06-15 16:12:19] CVMFS is ok
[2024-06-15 16:12:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-15 16:12:19] Small home clusters do not require a local http proxy but it is suggested if
[2024-06-15 16:12:19] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2024-06-15 16:12:19] Further information can be found at the LHC@home message board.
[2024-06-15 16:12:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-15 16:12:19] Checking for apptainer binary...
[2024-06-15 16:12:19] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-15 16:12:19] Running /usr/bin/apptainer --version
[2024-06-15 16:12:19] apptainer version 1.3.1
[2024-06-15 16:12:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-15 16:12:19] x32-kubuntu-7950X
[2024-06-15 16:12:19] apptainer works
[2024-06-15 16:12:19] Set ATHENA_PROC_NUMBER=4
[2024-06-15 16:12:19] Set ATHENA_CORE_NUMBER=4
[2024-06-15 16:12:19] Starting ATLAS job with PandaID=6231305217
[2024-06-15 16:12:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-15 21:18:16]  *** The last 200 lines of the pilot log: ***
[2024-06-15 21:18:16] 2024-06-16 01:17:55,312 | INFO     | intersect: -28967247193.406498
[2024-06-15 21:18:16] 2024-06-16 01:17:55,312 | INFO     | chi2: 4.477046093994703
[2024-06-15 21:18:16] 2024-06-16 01:17:55,312 | INFO     | model: linear, x: [1718482367.0, 1718482428.0, 1718482489.0, 1718482550.0, 1718482611.0, 1718482672.0, 1718482733.0, 1718482794.0, 1718482855.0, 1718482916.0, 1718
[2024-06-15 21:18:16] 2024-06-16 01:17:55,312 | INFO     | sum of square deviations: 7960484140.0
[2024-06-15 21:18:16] 2024-06-16 01:17:55,313 | INFO     | sum of deviations: 138693849138.00003
[2024-06-15 21:18:16] 2024-06-16 01:17:55,313 | INFO     | mean x: 1718491334.0
[2024-06-15 21:18:16] 2024-06-16 01:17:55,313 | INFO     | mean y: 2311682.813559322
[2024-06-15 21:18:16] 2024-06-16 01:17:55,314 | INFO     | -- intersect: -29938603169.98036
[2024-06-15 21:18:16] 2024-06-16 01:17:55,314 | INFO     | intersect: -29938603169.98036
[2024-06-15 21:18:16] 2024-06-16 01:17:55,314 | INFO     | chi2: 4.478181308258177
[2024-06-15 21:18:16] 2024-06-16 01:17:55,314 | INFO     | current chi2=4.478181308258177 (change=-0.025356322888810654 %)
[2024-06-15 21:18:16] 2024-06-16 01:17:55,314 | INFO     | right removable region: 294
[2024-06-15 21:18:16] 2024-06-16 01:17:55,314 | INFO     | model: linear, x: [1718482672.0, 1718482733.0, 1718482794.0, 1718482855.0, 1718482916.0, 1718482977.0, 1718483038.0, 1718483099.0, 1718483160.0, 1718483221.0, 1718
[2024-06-15 21:18:16] 2024-06-16 01:17:55,314 | INFO     | sum of square deviations: 7960484140.0
[2024-06-15 21:18:16] 2024-06-16 01:17:55,315 | INFO     | sum of deviations: 70919187917.99997
[2024-06-15 21:18:16] 2024-06-16 01:17:55,315 | INFO     | mean x: 1718491639.0
[2024-06-15 21:18:16] 2024-06-16 01:17:55,315 | INFO     | mean y: 2338556.1559322034
[2024-06-15 21:18:16] 2024-06-16 01:17:55,315 | INFO     | -- intersect: -15307538247.612535
[2024-06-15 21:18:16] 2024-06-16 01:17:55,315 | INFO     | intersect: -15307538247.612535
[2024-06-15 21:18:16] 2024-06-16 01:17:55,315 | INFO     | chi2: 1.98986989138107
[2024-06-15 21:18:16] 2024-06-16 01:17:55,315 | INFO     | current chi2=1.98986989138107 (change=55.55395567514512 %)
[2024-06-15 21:18:16] 2024-06-16 01:17:55,316 | INFO     | model: linear, x: [1718482977.0, 1718483038.0, 1718483099.0, 1718483160.0, 1718483221.0, 1718483282.0, 1718483343.0, 1718483404.0, 1718483465.0, 1718483526.0, 1718
[2024-06-15 21:18:16] 2024-06-16 01:17:55,316 | INFO     | sum of square deviations: 7562532492.5
[2024-06-15 21:18:16] 2024-06-16 01:17:55,317 | INFO     | sum of deviations: 12150051217.499998
[2024-06-15 21:18:16] 2024-06-16 01:17:55,317 | INFO     | mean x: 1718491791.5
[2024-06-15 21:18:16] 2024-06-16 01:17:55,317 | INFO     | mean y: 2361077.755172414
[2024-06-15 21:18:16] 2024-06-16 01:17:55,317 | INFO     | -- intersect: -2758587493.941603
[2024-06-15 21:18:16] 2024-06-16 01:17:55,317 | INFO     | intersect: -2758587493.941603
[2024-06-15 21:18:16] 2024-06-16 01:17:55,317 | INFO     | chi2: 0.38596458543333895
[2024-06-15 21:18:16] 2024-06-16 01:17:55,317 | INFO     | current chi2=0.38596458543333895 (change=80.60352653683 %)
[2024-06-15 21:18:16] 2024-06-16 01:17:55,317 | INFO     | model: linear, x: [1718483282.0, 1718483343.0, 1718483404.0, 1718483465.0, 1718483526.0, 1718483587.0, 1718483648.0, 1718483709.0, 1718483770.0, 1718483831.0, 1718
[2024-06-15 21:18:16] 2024-06-16 01:17:55,317 | INFO     | sum of square deviations: 7178069470.0
[2024-06-15 21:18:16] 2024-06-16 01:17:55,318 | INFO     | sum of deviations: -8276989471.999997
[2024-06-15 21:18:16] 2024-06-16 01:17:55,318 | INFO     | mean x: 1718491944.0
[2024-06-15 21:18:16] 2024-06-16 01:17:55,318 | INFO     | mean y: 2369117.7192982454
[2024-06-15 21:18:16] 2024-06-16 01:17:55,318 | INFO     | -- intersect: 1983952019.3131456
[2024-06-15 21:18:16] 2024-06-16 01:17:55,318 | INFO     | intersect: 1983952019.3131456
[2024-06-15 21:18:16] 2024-06-16 01:17:55,319 | INFO     | chi2: 0.014965239406846137
[2024-06-15 21:18:16] 2024-06-16 01:17:55,319 | INFO     | current chi2=0.014965239406846137 (change=96.12263923384474 %)
[2024-06-15 21:18:16] 2024-06-16 01:17:55,319 | INFO     | model: linear, x: [1718483587.0, 1718483648.0, 1718483709.0, 1718483770.0, 1718483831.0, 1718483892.0, 1718483953.0, 1718484014.0, 1718484075.0, 1718484136.0, 1718
[2024-06-15 21:18:16] 2024-06-16 01:17:55,319 | INFO     | sum of square deviations: 6806862510.0
[2024-06-15 21:18:16] 2024-06-16 01:17:55,320 | INFO     | sum of deviations: -8792341719.500006
[2024-06-15 21:18:16] 2024-06-16 01:17:55,320 | INFO     | mean x: 1718492096.5
[2024-06-15 21:18:16] 2024-06-16 01:17:55,320 | INFO     | mean y: 2369327.867857143
[2024-06-15 21:18:16] 2024-06-16 01:17:55,320 | INFO     | -- intersect: 2222124719.2086434
[2024-06-15 21:18:16] 2024-06-16 01:17:55,320 | INFO     | intersect: 2222124719.2086434
[2024-06-15 21:18:16] 2024-06-16 01:17:55,320 | INFO     | chi2: 0.01443266330227091
[2024-06-15 21:18:16] 2024-06-16 01:17:55,320 | INFO     | current chi2=0.01443266330227091 (change=3.5587543245822695 %)
[2024-06-15 21:18:16] 2024-06-16 01:17:55,320 | INFO     | left removable region: 40
[2024-06-15 21:18:16] 2024-06-16 01:17:55,320 | INFO     | model: linear, x: [1718484807.0, 1718484868.0, 1718484929.0, 1718484990.0, 1718485051.0, 1718485112.0, 1718485173.0, 1718485234.0, 1718485295.0, 1718485356.0, 1718
[2024-06-15 21:18:16] 2024-06-16 01:17:55,320 | INFO     | sum of square deviations: 5081276667.5
[2024-06-15 21:18:16] 2024-06-16 01:17:55,321 | INFO     | sum of deviations: -3817142466.000001
[2024-06-15 21:18:16] 2024-06-16 01:17:55,321 | INFO     | mean x: 1718492523.5
[2024-06-15 21:18:16] 2024-06-16 01:17:55,321 | INFO     | mean y: 2367092.0393700786
[2024-06-15 21:18:16] 2024-06-16 01:17:55,321 | INFO     | -- intersect: 1293328245.7414687
[2024-06-15 21:18:16] 2024-06-16 01:17:55,321 | INFO     | intersect: 1293328245.7414687
[2024-06-15 21:18:16] 2024-06-16 01:17:55,321 | INFO     | chi2: 0.011859421227474538
[2024-06-15 21:18:16] 2024-06-16 01:17:55,321 | INFO     | -- intersect: 1293328245.7414687
[2024-06-15 21:18:16] 2024-06-16 01:17:55,322 | INFO     | current memory leak: -0.75 B/s (using 254 data points, chi2=0.01)
[2024-06-15 21:18:16] 2024-06-16 01:17:55,322 | INFO     | ..............................
[2024-06-15 21:18:16] 2024-06-16 01:17:55,322 | INFO     | . Timing measurements:
[2024-06-15 21:18:16] 2024-06-16 01:17:55,322 | INFO     | . get job = 0 s
[2024-06-15 21:18:16] 2024-06-16 01:17:55,322 | INFO     | . initial setup = 1 s
[2024-06-15 21:18:16] 2024-06-16 01:17:55,322 | INFO     | . payload setup = 3 s
[2024-06-15 21:18:16] 2024-06-16 01:17:55,322 | INFO     | . stage-in = 0 s
[2024-06-15 21:18:16] 2024-06-16 01:17:55,322 | INFO     | . payload execution = 18300 s
[2024-06-15 21:18:16] 2024-06-16 01:17:55,322 | INFO     | . stage-out = 1 s
[2024-06-15 21:18:16] 2024-06-16 01:17:55,322 | INFO     | . log creation = 0 s
[2024-06-15 21:18:16] 2024-06-16 01:17:55,322 | INFO     | ..............................
[2024-06-15 21:18:16] 2024-06-16 01:17:55,454 | INFO     | 
[2024-06-15 21:18:16] 2024-06-16 01:17:55,455 | INFO     | job summary report
[2024-06-15 21:18:16] 2024-06-16 01:17:55,455 | INFO     | --------------------------------------------------
[2024-06-15 21:18:16] 2024-06-16 01:17:55,455 | INFO     | PanDA job id: 6231305217
[2024-06-15 21:18:16] 2024-06-16 01:17:55,455 | INFO     | task id: 38921007
[2024-06-15 21:18:16] 2024-06-16 01:17:55,455 | INFO     | errors: (none)
[2024-06-15 21:18:16] 2024-06-16 01:17:55,455 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-15 21:18:16] 2024-06-16 01:17:55,455 | INFO     | pilot state: finished 
[2024-06-15 21:18:16] 2024-06-16 01:17:55,455 | INFO     | transexitcode: 0
[2024-06-15 21:18:16] 2024-06-16 01:17:55,455 | INFO     | exeerrorcode: 0
[2024-06-15 21:18:16] 2024-06-16 01:17:55,455 | INFO     | exeerrordiag: 
[2024-06-15 21:18:16] 2024-06-16 01:17:55,455 | INFO     | exitcode: 0
[2024-06-15 21:18:16] 2024-06-16 01:17:55,455 | INFO     | exitmsg: OK
[2024-06-15 21:18:16] 2024-06-16 01:17:55,455 | INFO     | cpuconsumptiontime: 69578 s
[2024-06-15 21:18:16] 2024-06-16 01:17:55,455 | INFO     | nevents: 400
[2024-06-15 21:18:16] 2024-06-16 01:17:55,455 | INFO     | neventsw: 0
[2024-06-15 21:18:16] 2024-06-16 01:17:55,455 | INFO     | pid: 332346
[2024-06-15 21:18:16] 2024-06-16 01:17:55,455 | INFO     | pgrp: 332346
[2024-06-15 21:18:16] 2024-06-16 01:17:55,455 | INFO     | corecount: 4
[2024-06-15 21:18:16] 2024-06-16 01:17:55,455 | INFO     | event service: False
[2024-06-15 21:18:16] 2024-06-16 01:17:55,455 | INFO     | sizes: {0: 2379115, 2: 2379321, 10: 2379349, 18306: 2412108, 18307: 2412107, 18308: 2421137, 18311: 2421321, 18315: 2421491}
[2024-06-15 21:18:16] 2024-06-16 01:17:55,455 | INFO     | --------------------------------------------------
[2024-06-15 21:18:16] 2024-06-16 01:17:55,455 | INFO     | 
[2024-06-15 21:18:16] 2024-06-16 01:17:55,455 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/6
[2024-06-15 21:18:16] 2024-06-16 01:17:55,468 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-15 21:18:16] 2024-06-16 01:17:55,468 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-15 21:18:16] 2024-06-16 01:17:55,468 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-15 21:18:16] 2024-06-16 01:17:55,468 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-15 21:18:16] 2024-06-16 01:17:55,468 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-15 21:18:16] 2024-06-16 01:17:55,468 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-15 21:18:16] 2024-06-16 01:17:55,468 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-15 21:18:16] 2024-06-16 01:17:55,468 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-15 21:18:16] 2024-06-16 01:17:55,468 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-15 21:18:16] 2024-06-16 01:17:55,468 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-15 21:18:16] 2024-06-16 01:17:55,468 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-15 21:18:16] 2024-06-16 01:17:55,468 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-15 21:18:16] 2024-06-16 01:17:55,468 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-15 21:18:16] 2024-06-16 01:17:55,468 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-15 21:18:16] 2024-06-16 01:17:55,468 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-15 21:18:16] 2024-06-16 01:17:55,468 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-15 21:18:16] 2024-06-16 01:17:55,468 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-15 21:18:16] 2024-06-16 01:17:55,468 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-15 21:18:16] 2024-06-16 01:17:55,468 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-15 21:18:16] 2024-06-16 01:17:55,468 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-15 21:18:16] 2024-06-16 01:17:55,469 | INFO     | job 6231305217 has completed (purged errors)
[2024-06-15 21:18:16] 2024-06-16 01:17:55,469 | INFO     | overall cleanup function is called
[2024-06-15 21:18:16] 2024-06-16 01:17:56,475 | INFO     | --- collectZombieJob: --- 10, [332346]
[2024-06-15 21:18:16] 2024-06-16 01:17:56,475 | INFO     | zombie collector waiting for pid 332346
[2024-06-15 21:18:16] 2024-06-16 01:17:56,476 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-15 21:18:16] 2024-06-16 01:17:57,480 | INFO     | collected zombie processes
[2024-06-15 21:18:16] 2024-06-16 01:17:57,480 | INFO     | will now attempt to kill all subprocesses of pid=332346
[2024-06-15 21:18:16] 2024-06-16 01:17:57,533 | INFO     | process IDs to be killed: [332346] (in reverse order)
[2024-06-15 21:18:16] 2024-06-16 01:17:57,571 | WARNING  | found no corresponding commands to process id(s)
[2024-06-15 21:18:16] 2024-06-16 01:17:57,571 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-15 21:18:16] 2024-06-16 01:17:57,574 | INFO     | did not find any defunct processes belonging to 332346
[2024-06-15 21:18:16] 2024-06-16 01:17:57,577 | INFO     | did not find any defunct processes belonging to 332346
[2024-06-15 21:18:16] 2024-06-16 01:17:57,577 | INFO     | ready for new job
[2024-06-15 21:18:16] 2024-06-16 01:17:57,577 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-15 21:18:16] 2024-06-16 01:17:57,578 | INFO     | *************************************
[2024-06-15 21:18:16] 2024-06-16 01:17:57,578 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-15 21:18:16] 2024-06-16 01:17:57,578 | INFO     | *************************************
[2024-06-15 21:18:16] 2024-06-16 01:17:57,578 | INFO     | 
[2024-06-15 21:18:16] 2024-06-16 01:17:57,579 | INFO     | architecture information:
[2024-06-15 21:18:16] 2024-06-16 01:17:57,579 | INFO     | executing command: cat /etc/os-release
[2024-06-15 21:18:16] 2024-06-16 01:17:57,589 | INFO     | cat /etc/os-release:
[2024-06-15 21:18:16] NAME="CentOS Linux"
[2024-06-15 21:18:16] VERSION="7 (Core)"
[2024-06-15 21:18:16] ID="centos"
[2024-06-15 21:18:16] ID_LIKE="rhel fedora"
[2024-06-15 21:18:16] VERSION_ID="7"
[2024-06-15 21:18:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-15 21:18:16] ANSI_COLOR="0;31"
[2024-06-15 21:18:16] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-15 21:18:16] HOME_URL="https://www.centos.org/"
[2024-06-15 21:18:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-15 21:18:16] 
[2024-06-15 21:18:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-15 21:18:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-15 21:18:16] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-15 21:18:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-15 21:18:16] 
[2024-06-15 21:18:16] 2024-06-16 01:17:57,589 | INFO     | *************************************
[2024-06-15 21:18:16] 2024-06-16 01:17:58,091 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/6
[2024-06-15 21:18:16] 2024-06-16 01:17:58,103 | INFO     | sufficient remaining disk space (887773724672 B)
[2024-06-15 21:18:16] 2024-06-16 01:17:58,103 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-15 21:18:16] 2024-06-16 01:17:58,103 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-15 21:18:16] 2024-06-16 01:17:58,103 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-15 21:18:16] 2024-06-16 01:17:58,103 | INFO     | aborting loop
[2024-06-15 21:18:16] 2024-06-16 01:17:58,348 | INFO     | all job control threads have been joined
[2024-06-15 21:18:16] 2024-06-16 01:17:58,374 | INFO     | all data control threads have been joined
[2024-06-15 21:18:16] 2024-06-16 01:17:58,678 | INFO     | all payload control threads have been joined
[2024-06-15 21:18:16] 2024-06-16 01:17:58,698 | INFO     | found 0 job(s) in 20 queues
[2024-06-15 21:18:16] 2024-06-16 01:17:58,699 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-15 21:18:16] 2024-06-16 01:17:58,699 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-15 21:18:16] 2024-06-16 01:17:59,104 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-15 21:18:16] 2024-06-16 01:17:59,107 | INFO     | [job] retrieve thread has finished
[2024-06-15 21:18:16] 2024-06-16 01:17:59,108 | INFO     | [job] job monitor thread has finished
[2024-06-15 21:18:16] 2024-06-16 01:17:59,215 | INFO     | [data] copytool_in thread has finished
[2024-06-15 21:18:16] 2024-06-16 01:17:59,322 | INFO     | [payload] validate_post thread has finished
[2024-06-15 21:18:16] 2024-06-16 01:17:59,353 | INFO     | [job] control thread has finished
[2024-06-15 21:18:16] 2024-06-16 01:17:59,379 | INFO     | [data] control thread has finished
[2024-06-15 21:18:16] 2024-06-16 01:17:59,650 | INFO     | [payload] execute_payloads thread has finished
[2024-06-15 21:18:16] 2024-06-16 01:17:59,683 | INFO     | [payload] control thread has finished
[2024-06-15 21:18:16] 2024-06-16 01:17:59,715 | INFO     | [job] validate thread has finished
[2024-06-15 21:18:16] 2024-06-16 01:17:59,787 | INFO     | [job] create_data_payload thread has finished
[2024-06-15 21:18:16] 2024-06-16 01:17:59,867 | INFO     | [payload] validate_pre thread has finished
[2024-06-15 21:18:16] 2024-06-16 01:18:00,376 | INFO     | [payload] failed_post thread has finished
[2024-06-15 21:18:16] 2024-06-16 01:18:00,380 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-15 21:18:16] 2024-06-16 01:18:01,110 | INFO     | [data] copytool_out thread has finished
[2024-06-15 21:18:16] 2024-06-16 01:18:01,384 | INFO     | [job] queue monitor thread has finished
[2024-06-15 21:18:16] 2024-06-16 01:18:01,499 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-15 21:18:16] 2024-06-16 01:18:05,505 | INFO     | [data] queue_monitor thread has finished
[2024-06-15 21:18:16] 2024-06-16 01:18:08,697 | INFO     | job.realtimelogging is not enabled
[2024-06-15 21:18:16] 2024-06-16 01:18:09,700 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-15 21:18:16] 2024-06-16 01:18:11,646 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 135986580965184)>', '<ExcThread(monitor, started 135986203854592)>']
[2024-06-15 21:18:16] 2024-06-16 01:18:11,762 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-15 21:18:16] 2024-06-16 01:18:11,763 | INFO     | [monitor] control thread has ended
[2024-06-15 21:18:16] 2024-06-16 01:18:16,670 | INFO     | all workflow threads have been joined
[2024-06-15 21:18:16] 2024-06-16 01:18:16,671 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-15 21:18:16] 2024-06-16 01:18:16,671 | INFO     | traces error code: 0
[2024-06-15 21:18:16] 2024-06-16 01:18:16,671 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-15 21:18:16] 2024-06-16 01:18:16,720 [wrapper] ==== pilot stdout END ====
[2024-06-15 21:18:16] 2024-06-16 01:18:16,721 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-15 21:18:16] 2024-06-16 01:18:16,723 [wrapper] pilotpid: 325651
[2024-06-15 21:18:16] 2024-06-16 01:18:16,725 [wrapper] Pilot exit status: 0
[2024-06-15 21:18:16] 2024-06-16 01:18:16,731 [wrapper] pandaids: 6231305217
[2024-06-15 21:18:16] 2024-06-16 01:18:16,756 [wrapper] cleanup supervisor_pilot  703229 325652
[2024-06-15 21:18:16] 2024-06-16 01:18:16,758 [wrapper] Test setup, not cleaning
[2024-06-15 21:18:16] 2024-06-16 01:18:16,759 [wrapper] ==== wrapper stdout END ====
[2024-06-15 21:18:16] 2024-06-16 01:18:16,761 [wrapper] ==== wrapper stderr END ====
[2024-06-15 21:18:16] 2024-06-16 01:18:16,764 [wrapper] apfmon messages muted
[2024-06-15 21:18:16]  *** Error codes and diagnostics ***
[2024-06-15 21:18:16]     "exeErrorCode": 0,
[2024-06-15 21:18:16]     "exeErrorDiag": "",
[2024-06-15 21:18:16]     "pilotErrorCode": 0,
[2024-06-15 21:18:16]     "pilotErrorDiag": "",
[2024-06-15 21:18:16]  *** Listing of results directory ***
[2024-06-15 21:18:16] total 925352
[2024-06-15 21:18:16] -rw-r--r-- 1 boinc boinc    469766 Jun 15 04:20 pilot3.tar.gz
[2024-06-15 21:18:16] -rwx------ 1 boinc boinc     32308 Jun 15 04:21 runpilot2-wrapper.sh
[2024-06-15 21:18:16] -rw-r--r-- 1 boinc boinc      5654 Jun 15 04:21 queuedata.json
[2024-06-15 21:18:16] -rw-r--r-- 1 boinc boinc       100 Jun 15 16:12 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-15 21:18:16] -rwxr-xr-x 1 boinc boinc      7986 Jun 15 16:12 run_atlas
[2024-06-15 21:18:16] -rw-r--r-- 1 boinc boinc       105 Jun 15 16:12 job.xml
[2024-06-15 21:18:16] -rw-r--r-- 1 boinc boinc      9816 Jun 15 16:12 init_data.xml
[2024-06-15 21:18:16] -rw-r--r-- 2 boinc boinc 583779711 Jun 15 16:12 EVNT.38776201._000662.pool.root.1
[2024-06-15 21:18:16] -rw-r--r-- 2 boinc boinc     17537 Jun 15 16:12 start_atlas.sh
[2024-06-15 21:18:16] drwxrwx--x 2 boinc boinc      4096 Jun 15 16:12 shared
[2024-06-15 21:18:16] -rw-r--r-- 2 boinc boinc    482532 Jun 15 16:12 input.tar.gz
[2024-06-15 21:18:16] -rw-r--r-- 1 boinc boinc         0 Jun 15 16:12 boinc_lockfile
[2024-06-15 21:18:16] -rw-r--r-- 1 boinc boinc      2631 Jun 15 16:12 pandaJob.out
[2024-06-15 21:18:16] -rw------- 1 boinc boinc       424 Jun 15 16:12 setup.sh.local
[2024-06-15 21:18:16] -rw------- 1 boinc boinc   1020872 Jun 15 16:12 agis_schedconf.cvmfs.json
[2024-06-15 21:18:16] -rw------- 1 boinc boinc   1316805 Jun 15 16:12 cric_ddmendpoints.json
[2024-06-15 21:18:16] drwx------ 4 boinc boinc      4096 Jun 15 16:12 pilot3
[2024-06-15 21:18:16] -rw------- 1 boinc boinc        95 Jun 15 21:17 pilot_heartbeat.json
[2024-06-15 21:18:16] -rw-r--r-- 1 boinc boinc       531 Jun 15 21:17 boinc_task_state.xml
[2024-06-15 21:18:16] -rw------- 1 boinc boinc 355553833 Jun 15 21:17 HITS.38921007._041073.pool.root.1
[2024-06-15 21:18:16] -rw------- 1 boinc boinc      1026 Jun 15 21:17 memory_monitor_summary.json
[2024-06-15 21:18:16] -rw------- 1 boinc boinc         0 Jun 15 21:17 agis_ddmendpoints.agis.ALL.json
[2024-06-15 21:18:16] -rw------- 1 boinc boinc    390598 Jun 15 21:17 log.38921007._041073.job.log.tgz.1
[2024-06-15 21:18:16] -rw------- 1 boinc boinc      7671 Jun 15 21:17 heartbeat.json
[2024-06-15 21:18:16] -rw-r--r-- 1 boinc boinc      8192 Jun 15 21:17 boinc_mmap_file
[2024-06-15 21:18:16] -rw-r--r-- 1 boinc boinc        28 Jun 15 21:17 wrapper_checkpoint.txt
[2024-06-15 21:18:16] -rw------- 1 boinc boinc      4291 Jun 15 21:18 pilotlog.txt
[2024-06-15 21:18:16] -rw------- 1 boinc boinc   1952292 Jun 15 21:18 log.38921007._041073.job.log.1
[2024-06-15 21:18:16] -rw------- 1 boinc boinc       357 Jun 15 21:18 output.list
[2024-06-15 21:18:16] -rw-r--r-- 1 boinc boinc       620 Jun 15 21:18 runtime_log
[2024-06-15 21:18:16] -rw------- 1 boinc boinc   2365440 Jun 15 21:18 result.tar.gz
[2024-06-15 21:18:16] -rw-r--r-- 1 boinc boinc     11124 Jun 15 21:18 runtime_log.err
[2024-06-15 21:18:16] -rw------- 1 boinc boinc       643 Jun 15 21:18 gyMODmkqdc5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmhLUKDmC1h3Pm.diag
[2024-06-15 21:18:16] -rw-r--r-- 1 boinc boinc     21595 Jun 15 21:18 stderr.txt
[2024-06-15 21:18:16] HITS file was successfully produced:
[2024-06-15 21:18:16] -rw------- 1 boinc boinc 355553833 Jun 15 21:17 shared/HITS.pool.root.1
[2024-06-15 21:18:16]  *** Contents of shared directory: ***
[2024-06-15 21:18:16] total 920136
[2024-06-15 21:18:16] -rw-r--r-- 2 boinc boinc 583779711 Jun 15 16:12 ATLAS.root_0
[2024-06-15 21:18:16] -rw-r--r-- 2 boinc boinc     17537 Jun 15 16:12 start_atlas.sh
[2024-06-15 21:18:16] -rw-r--r-- 2 boinc boinc    482532 Jun 15 16:12 input.tar.gz
[2024-06-15 21:18:16] -rw------- 1 boinc boinc 355553833 Jun 15 21:17 HITS.pool.root.1
[2024-06-15 21:18:16] -rw------- 1 boinc boinc   2365440 Jun 15 21:18 result.tar.gz
21:18:18 (321288): run_atlas exited; CPU time 69483.405056
21:18:18 (321288): called boinc_finish(0)

</stderr_txt>
]]>

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