Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:30:38 (187941): wrapper (7.7.26015): starting
09:30:38 (187941): wrapper: running run_atlas (--nthreads 8)
[2024-06-15 09:30:38] Arguments: --nthreads 8
[2024-06-15 09:30:38] Threads: 8
[2024-06-15 09:30:38] Checking for CVMFS
[2024-06-15 09:30:38] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-15 09:30:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-15 09:30:38] Running cvmfs_config stat atlas.cern.ch
[2024-06-15 09:30:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-15 09:30:38] 2.11.2.0 72868 5735 217728 133905 2 152 17954955 18432000 10399 130560 0 31521604 99.071 54137121 39131 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-06-15 09:30:38] CVMFS is ok
[2024-06-15 09:30:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-15 09:30:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-15 09:30:38] Further information can be found at the LHC@home message board.
[2024-06-15 09:30:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-15 09:30:38] Checking for apptainer binary...
[2024-06-15 09:30:38] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-15 09:30:38] Running /usr/bin/apptainer --version
[2024-06-15 09:30:38] apptainer version 1.3.1-1.el7
[2024-06-15 09:30:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-15 09:30:39] c-211-33-1.aglt2.org
[2024-06-15 09:30:39] apptainer works
[2024-06-15 09:30:39] Set ATHENA_PROC_NUMBER=8
[2024-06-15 09:30:39] Set ATHENA_CORE_NUMBER=8
[2024-06-15 09:30:39] Starting ATLAS job with PandaID=6231278536
[2024-06-15 09:30:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-15 15:14:43]  *** The last 200 lines of the pilot log: ***
[2024-06-15 15:14:43] 2024-06-15 19:14:19,048 | INFO     | preparing for final server update for job 6231278536 in state='finished'
[2024-06-15 15:14:43] 2024-06-15 19:14:19,048 | INFO     | this job has now completed (state=finished)
[2024-06-15 15:14:43] 2024-06-15 19:14:19,049 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-06-15 15:14:43] 2024-06-15 19:14:19,049 | INFO     | job 6231278536 has finished - writing final server update
[2024-06-15 15:14:43] 2024-06-15 19:14:19,049 | INFO     | total number of processed events: 400 (read)
[2024-06-15 15:14:43] 2024-06-15 19:14:19,054 | INFO     | executing command: lscpu
[2024-06-15 15:14:43] 2024-06-15 19:14:19,102 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-06-15 15:14:43] 2024-06-15 19:14:19,102 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-06-15 15:14:43] 2024-06-15 19:14:19,150 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-06-15 15:14:43] 2024-06-15 19:14:20,130 | INFO     | monitor loop #1584: job 0:6231278536 is in state 'finished'
[2024-06-15 15:14:43] 2024-06-15 19:14:20,131 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-15 15:14:43] 2024-06-15 19:14:22,634 | INFO     | monitor loop #1585: job 0:6231278536 is in state 'finished'
[2024-06-15 15:14:43] 2024-06-15 19:14:22,635 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-15 15:14:43] 2024-06-15 19:14:23,054 | INFO     | CPU arch script returned: x86-64-v4
[2024-06-15 15:14:43] 2024-06-15 19:14:23,055 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6231278536/memory_monitor_summary.json (trf name=prmon)
[2024-06-15 15:14:43] 2024-06-15 19:14:23,055 | INFO     | extracted standard info from prmon json
[2024-06-15 15:14:43] 2024-06-15 19:14:23,055 | INFO     | extracted standard memory fields from prmon json
[2024-06-15 15:14:43] 2024-06-15 19:14:23,055 | WARNING  | GPU info not found in prmon json
[2024-06-15 15:14:43] 2024-06-15 19:14:23,056 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-15 15:14:43] 2024-06-15 19:14:23,056 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-15 15:14:43] 2024-06-15 19:14:23,059 | INFO     | fitting pss+swap vs Time
[2024-06-15 15:14:43] 2024-06-15 19:14:23,059 | INFO     | model: linear, x: [1718458273.0, 1718458334.0, 1718458395.0, 1718458456.0, 1718458517.0, 1718458578.0, 1718458639.0, 1718458700.0, 1718458761.0, 1718458822.0, 1718
[2024-06-15 15:14:43] 2024-06-15 19:14:23,059 | INFO     | sum of square deviations: 11973599384.5
[2024-06-15 15:14:43] 2024-06-15 19:14:23,061 | INFO     | sum of deviations: 582273200239.0001
[2024-06-15 15:14:43] 2024-06-15 19:14:23,061 | INFO     | mean x: 1718468551.5
[2024-06-15 15:14:43] 2024-06-15 19:14:23,061 | INFO     | mean y: 2361736.99408284
[2024-06-15 15:14:43] 2024-06-15 19:14:23,061 | INFO     | -- intersect: -83566342280.8887
[2024-06-15 15:14:43] 2024-06-15 19:14:23,061 | INFO     | intersect: -83566342280.8887
[2024-06-15 15:14:43] 2024-06-15 19:14:23,061 | INFO     | chi2: 14.273475493449581
[2024-06-15 15:14:43] 2024-06-15 19:14:23,061 | INFO     | model: linear, x: [1718458273.0, 1718458334.0, 1718458395.0, 1718458456.0, 1718458517.0, 1718458578.0, 1718458639.0, 1718458700.0, 1718458761.0, 1718458822.0, 1718
[2024-06-15 15:14:43] 2024-06-15 19:14:23,062 | INFO     | sum of square deviations: 11450045382.0
[2024-06-15 15:14:43] 2024-06-15 19:14:23,063 | INFO     | sum of deviations: 594857289240.0
[2024-06-15 15:14:43] 2024-06-15 19:14:23,063 | INFO     | mean x: 1718468399.0
[2024-06-15 15:14:43] 2024-06-15 19:14:23,063 | INFO     | mean y: 2365322.0840840843
[2024-06-15 15:14:43] 2024-06-15 19:14:23,063 | INFO     | -- intersect: -89276185056.48093
[2024-06-15 15:14:43] 2024-06-15 19:14:23,063 | INFO     | intersect: -89276185056.48093
[2024-06-15 15:14:43] 2024-06-15 19:14:23,064 | INFO     | chi2: 13.446866998935965
[2024-06-15 15:14:43] 2024-06-15 19:14:23,064 | INFO     | current chi2=13.446866998935965 (change=5.791220890055581 %)
[2024-06-15 15:14:43] 2024-06-15 19:14:23,064 | INFO     | right removable region: 332
[2024-06-15 15:14:43] 2024-06-15 19:14:23,064 | INFO     | model: linear, x: [1718458578.0, 1718458639.0, 1718458700.0, 1718458761.0, 1718458822.0, 1718458883.0, 1718458944.0, 1718459005.0, 1718459066.0, 1718459127.0, 1718
[2024-06-15 15:14:43] 2024-06-15 19:14:23,064 | INFO     | sum of square deviations: 11450045382.0
[2024-06-15 15:14:43] 2024-06-15 19:14:23,065 | INFO     | sum of deviations: 486833346147.00006
[2024-06-15 15:14:43] 2024-06-15 19:14:23,066 | INFO     | mean x: 1718468704.0
[2024-06-15 15:14:43] 2024-06-15 19:14:23,066 | INFO     | mean y: 2389497.111111111
[2024-06-15 15:14:43] 2024-06-15 19:14:23,066 | INFO     | -- intersect: -73063510375.42606
[2024-06-15 15:14:43] 2024-06-15 19:14:23,066 | INFO     | intersect: -73063510375.42606
[2024-06-15 15:14:43] 2024-06-15 19:14:23,066 | INFO     | chi2: 10.975582647215688
[2024-06-15 15:14:43] 2024-06-15 19:14:23,066 | INFO     | current chi2=10.975582647215688 (change=23.105044372321025 %)
[2024-06-15 15:14:43] 2024-06-15 19:14:23,066 | INFO     | left removable region: 10
[2024-06-15 15:14:43] 2024-06-15 19:14:23,066 | INFO     | model: linear, x: [1718458883.0, 1718458944.0, 1718459005.0, 1718459066.0, 1718459127.0, 1718459188.0, 1718459249.0, 1718459310.0, 1718459371.0, 1718459432.0, 1718
[2024-06-15 15:14:43] 2024-06-15 19:14:23,066 | INFO     | sum of square deviations: 10352419220.5
[2024-06-15 15:14:43] 2024-06-15 19:14:23,068 | INFO     | sum of deviations: 424884659598.50006
[2024-06-15 15:14:43] 2024-06-15 19:14:23,068 | INFO     | mean x: 1718468673.5
[2024-06-15 15:14:43] 2024-06-15 19:14:23,068 | INFO     | mean y: 2416018.313664596
[2024-06-15 15:14:43] 2024-06-15 19:14:23,068 | INFO     | -- intersect: -70527086489.1658
[2024-06-15 15:14:43] 2024-06-15 19:14:23,068 | INFO     | intersect: -70527086489.1658
[2024-06-15 15:14:43] 2024-06-15 19:14:23,068 | INFO     | chi2: 8.401641389040865
[2024-06-15 15:14:43] 2024-06-15 19:14:23,068 | INFO     | -- intersect: -70527086489.1658
[2024-06-15 15:14:43] 2024-06-15 19:14:23,068 | INFO     | current memory leak: 41.04 B/s (using 322 data points, chi2=8.40)
[2024-06-15 15:14:43] 2024-06-15 19:14:23,069 | INFO     | ..............................
[2024-06-15 15:14:43] 2024-06-15 19:14:23,069 | INFO     | . Timing measurements:
[2024-06-15 15:14:43] 2024-06-15 19:14:23,069 | INFO     | . get job = 0 s
[2024-06-15 15:14:43] 2024-06-15 19:14:23,069 | INFO     | . initial setup = 1 s
[2024-06-15 15:14:43] 2024-06-15 19:14:23,069 | INFO     | . payload setup = 5 s
[2024-06-15 15:14:43] 2024-06-15 19:14:23,069 | INFO     | . stage-in = 0 s
[2024-06-15 15:14:43] 2024-06-15 19:14:23,069 | INFO     | . payload execution = 20583 s
[2024-06-15 15:14:43] 2024-06-15 19:14:23,069 | INFO     | . stage-out = 1 s
[2024-06-15 15:14:43] 2024-06-15 19:14:23,069 | INFO     | . log creation = 0 s
[2024-06-15 15:14:43] 2024-06-15 19:14:23,069 | INFO     | ..............................
[2024-06-15 15:14:43] 2024-06-15 19:14:23,121 | INFO     | 
[2024-06-15 15:14:43] 2024-06-15 19:14:23,121 | INFO     | job summary report
[2024-06-15 15:14:43] 2024-06-15 19:14:23,121 | INFO     | --------------------------------------------------
[2024-06-15 15:14:43] 2024-06-15 19:14:23,121 | INFO     | PanDA job id: 6231278536
[2024-06-15 15:14:43] 2024-06-15 19:14:23,121 | INFO     | task id: 38921001
[2024-06-15 15:14:43] 2024-06-15 19:14:23,121 | INFO     | errors: (none)
[2024-06-15 15:14:43] 2024-06-15 19:14:23,121 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-15 15:14:43] 2024-06-15 19:14:23,122 | INFO     | pilot state: finished 
[2024-06-15 15:14:43] 2024-06-15 19:14:23,122 | INFO     | transexitcode: 0
[2024-06-15 15:14:43] 2024-06-15 19:14:23,122 | INFO     | exeerrorcode: 0
[2024-06-15 15:14:43] 2024-06-15 19:14:23,122 | INFO     | exeerrordiag: 
[2024-06-15 15:14:43] 2024-06-15 19:14:23,122 | INFO     | exitcode: 0
[2024-06-15 15:14:43] 2024-06-15 19:14:23,122 | INFO     | exitmsg: OK
[2024-06-15 15:14:43] 2024-06-15 19:14:23,122 | INFO     | cpuconsumptiontime: 130165 s
[2024-06-15 15:14:43] 2024-06-15 19:14:23,122 | INFO     | nevents: 400
[2024-06-15 15:14:43] 2024-06-15 19:14:23,122 | INFO     | neventsw: 0
[2024-06-15 15:14:43] 2024-06-15 19:14:23,122 | INFO     | pid: 213839
[2024-06-15 15:14:43] 2024-06-15 19:14:23,122 | INFO     | pgrp: 213839
[2024-06-15 15:14:43] 2024-06-15 19:14:23,122 | INFO     | corecount: 8
[2024-06-15 15:14:43] 2024-06-15 19:14:23,122 | INFO     | event service: False
[2024-06-15 15:14:43] 2024-06-15 19:14:23,122 | INFO     | sizes: {0: 2379183, 4: 2379389, 11: 2379417, 20592: 2412844, 20594: 2421860, 20599: 2421974}
[2024-06-15 15:14:43] 2024-06-15 19:14:23,122 | INFO     | --------------------------------------------------
[2024-06-15 15:14:43] 2024-06-15 19:14:23,122 | INFO     | 
[2024-06-15 15:14:43] 2024-06-15 19:14:23,123 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2024-06-15 15:14:43] 2024-06-15 19:14:23,140 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-15 15:14:43] 2024-06-15 19:14:23,140 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-15 15:14:43] 2024-06-15 19:14:23,140 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-15 15:14:43] 2024-06-15 19:14:23,140 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-15 15:14:43] 2024-06-15 19:14:23,140 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-15 15:14:43] 2024-06-15 19:14:23,140 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-15 15:14:43] 2024-06-15 19:14:23,140 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-15 15:14:43] 2024-06-15 19:14:23,141 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-15 15:14:43] 2024-06-15 19:14:23,141 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-15 15:14:43] 2024-06-15 19:14:23,141 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-15 15:14:43] 2024-06-15 19:14:23,141 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-15 15:14:43] 2024-06-15 19:14:23,141 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-15 15:14:43] 2024-06-15 19:14:23,141 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-15 15:14:43] 2024-06-15 19:14:23,141 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-15 15:14:43] 2024-06-15 19:14:23,141 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-15 15:14:43] 2024-06-15 19:14:23,141 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-15 15:14:43] 2024-06-15 19:14:23,141 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-15 15:14:43] 2024-06-15 19:14:23,141 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-15 15:14:43] 2024-06-15 19:14:23,141 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-15 15:14:43] 2024-06-15 19:14:23,141 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-15 15:14:43] 2024-06-15 19:14:23,141 | INFO     | job 6231278536 has completed (purged errors)
[2024-06-15 15:14:43] 2024-06-15 19:14:23,141 | INFO     | overall cleanup function is called
[2024-06-15 15:14:43] 2024-06-15 19:14:24,148 | INFO     | --- collectZombieJob: --- 10, [213839]
[2024-06-15 15:14:43] 2024-06-15 19:14:24,149 | INFO     | zombie collector waiting for pid 213839
[2024-06-15 15:14:43] 2024-06-15 19:14:24,149 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-15 15:14:43] 2024-06-15 19:14:25,154 | INFO     | collected zombie processes
[2024-06-15 15:14:43] 2024-06-15 19:14:25,154 | INFO     | will now attempt to kill all subprocesses of pid=213839
[2024-06-15 15:14:43] 2024-06-15 19:14:25,315 | INFO     | process IDs to be killed: [213839] (in reverse order)
[2024-06-15 15:14:43] 2024-06-15 19:14:25,400 | WARNING  | found no corresponding commands to process id(s)
[2024-06-15 15:14:43] 2024-06-15 19:14:25,400 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-15 15:14:43] 2024-06-15 19:14:25,410 | INFO     | did not find any defunct processes belonging to 213839
[2024-06-15 15:14:43] 2024-06-15 19:14:25,419 | INFO     | did not find any defunct processes belonging to 213839
[2024-06-15 15:14:43] 2024-06-15 19:14:25,419 | INFO     | ready for new job
[2024-06-15 15:14:43] 2024-06-15 19:14:25,419 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-15 15:14:43] 2024-06-15 19:14:25,421 | INFO     | *************************************
[2024-06-15 15:14:43] 2024-06-15 19:14:25,421 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-15 15:14:43] 2024-06-15 19:14:25,422 | INFO     | *************************************
[2024-06-15 15:14:43] 2024-06-15 19:14:25,422 | INFO     | 
[2024-06-15 15:14:43] 2024-06-15 19:14:25,426 | INFO     | architecture information:
[2024-06-15 15:14:43] 2024-06-15 19:14:25,426 | INFO     | executing command: cat /etc/os-release
[2024-06-15 15:14:43] 2024-06-15 19:14:25,442 | INFO     | cat /etc/os-release:
[2024-06-15 15:14:43] NAME="CentOS Linux"
[2024-06-15 15:14:43] VERSION="7 (Core)"
[2024-06-15 15:14:43] ID="centos"
[2024-06-15 15:14:43] ID_LIKE="rhel fedora"
[2024-06-15 15:14:43] VERSION_ID="7"
[2024-06-15 15:14:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-15 15:14:43] ANSI_COLOR="0;31"
[2024-06-15 15:14:43] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-15 15:14:43] HOME_URL="https://www.centos.org/"
[2024-06-15 15:14:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-15 15:14:43] 
[2024-06-15 15:14:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-15 15:14:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-15 15:14:43] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-15 15:14:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-15 15:14:43] 
[2024-06-15 15:14:43] 2024-06-15 19:14:25,443 | INFO     | *************************************
[2024-06-15 15:14:43] 2024-06-15 19:14:25,945 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2024-06-15 15:14:43] 2024-06-15 19:14:25,962 | INFO     | sufficient remaining disk space (101643714560 B)
[2024-06-15 15:14:43] 2024-06-15 19:14:25,962 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-15 15:14:43] 2024-06-15 19:14:25,962 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-15 15:14:43] 2024-06-15 19:14:25,962 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-15 15:14:43] 2024-06-15 19:14:26,142 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-15 15:14:43] 2024-06-15 19:14:26,143 | INFO     | aborting loop
[2024-06-15 15:14:43] 2024-06-15 19:14:26,421 | INFO     | found 0 job(s) in 20 queues
[2024-06-15 15:14:43] 2024-06-15 19:14:26,422 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-15 15:14:43] 2024-06-15 19:14:26,423 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-15 15:14:43] 2024-06-15 19:14:26,485 | INFO     | all data control threads have been joined
[2024-06-15 15:14:43] 2024-06-15 19:14:26,595 | INFO     | all job control threads have been joined
[2024-06-15 15:14:43] 2024-06-15 19:14:26,969 | INFO     | [job] retrieve thread has finished
[2024-06-15 15:14:43] 2024-06-15 19:14:27,068 | INFO     | [job] create_data_payload thread has finished
[2024-06-15 15:14:43] 2024-06-15 19:14:27,147 | INFO     | [job] job monitor thread has finished
[2024-06-15 15:14:43] 2024-06-15 19:14:27,203 | INFO     | all payload control threads have been joined
[2024-06-15 15:14:43] 2024-06-15 19:14:27,491 | INFO     | [data] control thread has finished
[2024-06-15 15:14:43] 2024-06-15 19:14:27,516 | INFO     | [payload] validate_post thread has finished
[2024-06-15 15:14:43] 2024-06-15 19:14:27,600 | INFO     | [job] control thread has finished
[2024-06-15 15:14:43] 2024-06-15 19:14:27,625 | INFO     | [job] validate thread has finished
[2024-06-15 15:14:43] 2024-06-15 19:14:27,771 | INFO     | [payload] failed_post thread has finished
[2024-06-15 15:14:43] 2024-06-15 19:14:27,968 | INFO     | [data] copytool_out thread has finished
[2024-06-15 15:14:43] 2024-06-15 19:14:28,131 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-15 15:14:43] 2024-06-15 19:14:28,169 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-15 15:14:43] 2024-06-15 19:14:28,208 | INFO     | [payload] control thread has finished
[2024-06-15 15:14:43] 2024-06-15 19:14:28,255 | INFO     | [data] copytool_in thread has finished
[2024-06-15 15:14:43] 2024-06-15 19:14:28,259 | INFO     | [payload] execute_payloads thread has finished
[2024-06-15 15:14:43] 2024-06-15 19:14:28,467 | INFO     | [payload] validate_pre thread has finished
[2024-06-15 15:14:43] 2024-06-15 19:14:29,137 | INFO     | [job] queue monitor thread has finished
[2024-06-15 15:14:43] 2024-06-15 19:14:32,174 | INFO     | [data] queue_monitor thread has finished
[2024-06-15 15:14:43] 2024-06-15 19:14:36,271 | INFO     | job.realtimelogging is not enabled
[2024-06-15 15:14:43] 2024-06-15 19:14:37,276 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-15 15:14:43] 2024-06-15 19:14:38,141 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139705097733952)>', '<ExcThread(monitor, started 139704666150656)>']
[2024-06-15 15:14:43] 2024-06-15 19:14:38,485 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-15 15:14:43] 2024-06-15 19:14:38,486 | INFO     | [monitor] control thread has ended
[2024-06-15 15:14:43] 2024-06-15 19:14:43,167 | INFO     | all workflow threads have been joined
[2024-06-15 15:14:43] 2024-06-15 19:14:43,167 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-15 15:14:43] 2024-06-15 19:14:43,167 | INFO     | traces error code: 0
[2024-06-15 15:14:43] 2024-06-15 19:14:43,168 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-15 15:14:43] 2024-06-15 19:14:43,296 [wrapper] ==== pilot stdout END ====
[2024-06-15 15:14:43] 2024-06-15 19:14:43,299 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-15 15:14:43] 2024-06-15 19:14:43,301 [wrapper] pilotpid: 194941
[2024-06-15 15:14:43] 2024-06-15 19:14:43,303 [wrapper] Pilot exit status: 0
[2024-06-15 15:14:43] 2024-06-15 19:14:43,313 [wrapper] pandaids: 6231278536
[2024-06-15 15:14:43] 2024-06-15 19:14:43,386 [wrapper] cleanup supervisor_pilot 201362 194942
[2024-06-15 15:14:43] 2024-06-15 19:14:43,388 [wrapper] Test setup, not cleaning
[2024-06-15 15:14:43] 2024-06-15 19:14:43,390 [wrapper] ==== wrapper stdout END ====
[2024-06-15 15:14:43] 2024-06-15 19:14:43,392 [wrapper] ==== wrapper stderr END ====
[2024-06-15 15:14:43] 2024-06-15 19:14:43,397 [wrapper] apfmon messages muted
[2024-06-15 15:14:43]  *** Error codes and diagnostics ***
[2024-06-15 15:14:43]     "exeErrorCode": 0,
[2024-06-15 15:14:43]     "exeErrorDiag": "",
[2024-06-15 15:14:43]     "pilotErrorCode": 0,
[2024-06-15 15:14:43]     "pilotErrorDiag": "",
[2024-06-15 15:14:43]  *** Listing of results directory ***
[2024-06-15 15:14:43] total 958100
[2024-06-15 15:14:43] -rw-r--r-- 1 boincer umatlas    469766 Jun 15 03:53 pilot3.tar.gz
[2024-06-15 15:14:43] -rw-r--r-- 1 boincer umatlas      5654 Jun 15 04:13 queuedata.json
[2024-06-15 15:14:43] -rwx------ 1 boincer umatlas     32308 Jun 15 04:14 runpilot2-wrapper.sh
[2024-06-15 15:14:43] -rw-r--r-- 1 boincer umatlas       100 Jun 15 09:30 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-15 15:14:43] -rwxr-xr-x 1 boincer umatlas      7986 Jun 15 09:30 run_atlas
[2024-06-15 15:14:43] -rw-r--r-- 1 boincer umatlas       105 Jun 15 09:30 job.xml
[2024-06-15 15:14:43] -rw-r--r-- 2 boincer umatlas 614386549 Jun 15 09:30 EVNT.38776190._000419.pool.root.1
[2024-06-15 15:14:43] -rw-r--r-- 2 boincer umatlas     17537 Jun 15 09:30 start_atlas.sh
[2024-06-15 15:14:43] drwxrwx--x 2 boincer umatlas      4096 Jun 15 09:30 shared
[2024-06-15 15:14:43] -rw-r--r-- 2 boincer umatlas    482545 Jun 15 09:30 input.tar.gz
[2024-06-15 15:14:43] -rw-r--r-- 1 boincer umatlas         0 Jun 15 09:30 boinc_lockfile
[2024-06-15 15:14:43] -rw-r--r-- 1 boincer umatlas      2656 Jun 15 09:30 pandaJob.out
[2024-06-15 15:14:43] -rw------- 1 boincer umatlas       467 Jun 15 09:30 setup.sh.local
[2024-06-15 15:14:43] -rw------- 1 boincer umatlas   1020872 Jun 15 09:30 agis_schedconf.cvmfs.json
[2024-06-15 15:14:43] -rw------- 1 boincer umatlas   1316805 Jun 15 09:30 cric_ddmendpoints.json
[2024-06-15 15:14:43] drwx------ 4 boincer umatlas      4096 Jun 15 09:30 pilot3
[2024-06-15 15:14:43] -rw-r--r-- 1 boincer umatlas      6386 Jun 15 15:09 init_data.xml
[2024-06-15 15:14:43] -rw------- 1 boincer umatlas 358243271 Jun 15 15:13 HITS.38921001._057869.pool.root.1
[2024-06-15 15:14:43] -rw-r--r-- 1 boincer umatlas       532 Jun 15 15:13 boinc_task_state.xml
[2024-06-15 15:14:43] -rw------- 1 boincer umatlas        95 Jun 15 15:13 pilot_heartbeat.json
[2024-06-15 15:14:43] -rw------- 1 boincer umatlas      1061 Jun 15 15:14 memory_monitor_summary.json
[2024-06-15 15:14:43] -rw-r--r-- 1 boincer umatlas      8192 Jun 15 15:14 boinc_mmap_file
[2024-06-15 15:14:43] -rw-r--r-- 1 boincer umatlas        29 Jun 15 15:14 wrapper_checkpoint.txt
[2024-06-15 15:14:43] -rw------- 1 boincer umatlas         0 Jun 15 15:14 agis_ddmendpoints.agis.ALL.json
[2024-06-15 15:14:43] -rw------- 1 boincer umatlas    476214 Jun 15 15:14 log.38921001._057869.job.log.tgz.1
[2024-06-15 15:14:43] -rw------- 1 boincer umatlas      7778 Jun 15 15:14 heartbeat.json
[2024-06-15 15:14:43] -rw------- 1 boincer umatlas      4284 Jun 15 15:14 pilotlog.txt
[2024-06-15 15:14:43] -rw------- 1 boincer umatlas   1990347 Jun 15 15:14 log.38921001._057869.job.log.1
[2024-06-15 15:14:43] -rw------- 1 boincer umatlas       357 Jun 15 15:14 output.list
[2024-06-15 15:14:43] -rw-r--r-- 1 boincer umatlas       620 Jun 15 15:14 runtime_log
[2024-06-15 15:14:43] -rw------- 1 boincer umatlas   2488320 Jun 15 15:14 result.tar.gz
[2024-06-15 15:14:43] -rw-r--r-- 1 boincer umatlas     11415 Jun 15 15:14 runtime_log.err
[2024-06-15 15:14:43] -rw------- 1 boincer umatlas       652 Jun 15 15:14 5swKDmGjdc5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmKvfKDmE6aORo.diag
[2024-06-15 15:14:43] -rw-r--r-- 1 boincer umatlas     21737 Jun 15 15:14 stderr.txt
[2024-06-15 15:14:43] HITS file was successfully produced:
[2024-06-15 15:14:43] -rw------- 1 boincer umatlas 358243271 Jun 15 15:13 shared/HITS.pool.root.1
[2024-06-15 15:14:43]  *** Contents of shared directory: ***
[2024-06-15 15:14:43] total 952768
[2024-06-15 15:14:43] -rw-r--r-- 2 boincer umatlas 614386549 Jun 15 09:30 ATLAS.root_0
[2024-06-15 15:14:43] -rw-r--r-- 2 boincer umatlas     17537 Jun 15 09:30 start_atlas.sh
[2024-06-15 15:14:43] -rw-r--r-- 2 boincer umatlas    482545 Jun 15 09:30 input.tar.gz
[2024-06-15 15:14:43] -rw------- 1 boincer umatlas 358243271 Jun 15 15:13 HITS.pool.root.1
[2024-06-15 15:14:43] -rw------- 1 boincer umatlas   2488320 Jun 15 15:14 result.tar.gz
15:14:44 (187941): run_atlas exited; CPU time 129852.828332
15:14:44 (187941): called boinc_finish(0)

</stderr_txt>
]]>

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