Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2024-06-16 16:41:46 (20924): Detected: vboxwrapper 26206
2024-06-16 16:41:46 (20924): Detected: BOINC client v7.24.1
2024-06-16 16:41:48 (20924): Detected: VirtualBox VboxManage Interface (Version: 6.1.46)
2024-06-16 16:41:48 (20924): Successfully copied 'init_data.xml' to the shared directory.
2024-06-16 16:41:49 (20924): Create VM. (boinc_3d78a9b3a5850094, slot#0)
2024-06-16 16:41:49 (20924): Setting Memory Size for VM. (4400MB)
2024-06-16 16:41:49 (20924): Setting CPU Count for VM. (4)
2024-06-16 16:41:50 (20924): Setting Chipset Options for VM.
2024-06-16 16:41:50 (20924): Setting Graphics Controller Options for VM.
2024-06-16 16:41:50 (20924): Setting Boot Options for VM.
2024-06-16 16:41:51 (20924): Setting Network Configuration for NAT.
2024-06-16 16:41:51 (20924): Enabling VM Network Access.
2024-06-16 16:41:51 (20924): Disabling USB Support for VM.
2024-06-16 16:41:51 (20924): Disabling COM Port Support for VM.
2024-06-16 16:41:52 (20924): Disabling LPT Port Support for VM.
2024-06-16 16:41:52 (20924): Disabling Audio Support for VM.
2024-06-16 16:41:52 (20924): Disabling Clipboard Support for VM.
2024-06-16 16:41:52 (20924): Disabling Drag and Drop Support for VM.
2024-06-16 16:41:53 (20924): Adding storage controller(s) to VM.
2024-06-16 16:41:53 (20924): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-06-16 16:41:54 (20924): Adding VirtualBox Guest Additions to VM.
2024-06-16 16:41:54 (20924): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-06-16 16:41:55 (20924): forwarding host port 63711 to guest port 80
2024-06-16 16:41:55 (20924): Enabling remote desktop for VM.
2024-06-16 16:41:56 (20924): Enabling shared directory for VM.
2024-06-16 16:41:56 (20924): Starting VM using VBoxManage interface. (boinc_3d78a9b3a5850094, slot#0)
2024-06-16 16:42:00 (20924): Successfully started VM. (PID = '22732')
2024-06-16 16:42:00 (20924): Reporting VM Process ID to BOINC.
2024-06-16 16:42:00 (20924): Guest Log: BIOS: VirtualBox 6.1.46
2024-06-16 16:42:00 (20924): Guest Log: CPUID EDX: 0x178bfbff
2024-06-16 16:42:00 (20924): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-06-16 16:42:00 (20924): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-06-16 16:42:00 (20924): VM state change detected. (old = 'poweredoff', new = 'running')
2024-06-16 16:42:00 (20924): Detected: Web Application Enabled (http://localhost:63711)
2024-06-16 16:42:00 (20924): Detected: Remote Desktop Enabled (localhost:63712)
2024-06-16 16:42:00 (20924): Preference change detected
2024-06-16 16:42:00 (20924): Setting CPU throttle for VM. (60%)
2024-06-16 16:42:01 (20924): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2024-06-16 16:42:02 (20924): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-06-16 16:42:02 (20924): Guest Log: BIOS: Booting from Hard Disk...
2024-06-16 16:42:05 (20924): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-06-16 16:42:05 (20924): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-06-16 16:42:05 (20924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-06-16 16:42:05 (20924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-06-16 16:42:05 (20924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-06-16 16:42:05 (20924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-06-16 16:42:05 (20924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-06-16 16:42:05 (20924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-06-16 16:42:05 (20924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-06-16 16:42:05 (20924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-06-16 16:42:05 (20924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-06-16 16:42:05 (20924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-06-16 16:42:05 (20924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-06-16 16:42:05 (20924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-06-16 16:42:05 (20924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-06-16 16:42:05 (20924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-06-16 16:42:05 (20924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-06-16 16:42:05 (20924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-06-16 16:42:05 (20924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-06-16 16:42:05 (20924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-06-16 16:42:06 (20924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-06-16 16:42:06 (20924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-06-16 16:42:06 (20924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-06-16 16:42:06 (20924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-06-16 16:42:06 (20924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-06-16 16:42:06 (20924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-06-16 16:42:06 (20924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-06-16 16:42:06 (20924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-06-16 16:42:06 (20924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-06-16 16:42:06 (20924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-06-16 16:42:06 (20924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-06-16 16:42:06 (20924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-06-16 16:42:12 (20924): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-06-16 16:42:12 (20924): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-06-16 16:42:19 (20924): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-06-16 16:42:19 (20924): Guest Log: 00:00:00.000142 main     Log opened 2024-06-16T16:42:18.023526000Z
2024-06-16 16:42:20 (20924): Guest Log: 00:00:00.000237 main     OS Product: Linux
2024-06-16 16:42:20 (20924): Guest Log: 00:00:00.000266 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-06-16 16:42:20 (20924): Guest Log: 00:00:00.000281 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-06-16 16:42:20 (20924): Guest Log: 00:00:00.000296 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-06-16 16:42:20 (20924): Guest Log: 00:00:00.000297 main     Process ID: 1241
2024-06-16 16:42:20 (20924): Guest Log: 00:00:00.000297 main     Package type: LINUX_64BITS_GENERIC
2024-06-16 16:42:20 (20924): Guest Log: 00:00:00.002099 main     5.2.32 r132073 started. Verbose level = 0
2024-06-16 16:42:20 (20924): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-06-16 16:42:20 (20924): Guest Log: [INFO] Mounting shared directory
2024-06-16 16:42:20 (20924): Guest Log: [INFO] Checking for init_data.xml
2024-06-16 16:42:24 (20924): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-06-16 16:42:24 (20924): Guest Log: [INFO] Detected branch: prod
2024-06-16 16:42:24 (20924): Guest Log: This is the prod version of the ATLAS job wrapper
2024-06-16 16:42:24 (20924): Guest Log: Copying input files
2024-06-16 16:42:29 (20924): Guest Log: Copied input files into RunAtlas.
2024-06-16 16:42:29 (20924): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-06-16 16:42:29 (20924): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-06-16 16:42:29 (20924): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-06-16 16:42:29 (20924): Guest Log: Further information can be found at the LHC@home message board.
2024-06-16 16:42:30 (20924): Guest Log: 00:00:10.037898 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 504 607 000ns (GuestNow=1 718 548 949 524 708 000 ns GuestLast=1 718 556 138 029 315 000 ns fSetTimeLastLoop=true )
2024-06-16 16:42:38 (20924): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-06-16 16:42:38 (20924): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-06-16 16:42:38 (20924): Guest Log: 2.6.3.0 1516 0 30136 133942 4 1 3117205 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2024-06-16 16:42:40 (20924): Guest Log: copied the webapp to /var/www
2024-06-16 16:42:40 (20924): Guest Log: ATHENA_PROC_NUMBER=4
2024-06-16 16:42:40 (20924): Guest Log: ATHENA_CORE_NUMBER=4
2024-06-16 16:42:40 (20924): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-06-16 16:42:40 (20924): Guest Log:  *** Starting ATLAS job. (PandaID=6231234455 taskID=38921007) ***
2024-06-16 18:22:07 (20924): Status Report: Elapsed Time: '6000.000000'
2024-06-16 18:22:07 (20924): Status Report: CPU Time: '11984.281250'
2024-06-16 20:02:13 (20924): Status Report: Elapsed Time: '12000.000000'
2024-06-16 20:02:13 (20924): Status Report: CPU Time: '26405.484375'
2024-06-16 21:42:19 (20924): Status Report: Elapsed Time: '18000.000000'
2024-06-16 21:42:19 (20924): Status Report: CPU Time: '40818.343750'
2024-06-16 23:22:26 (20924): Status Report: Elapsed Time: '24000.000000'
2024-06-16 23:22:26 (20924): Status Report: CPU Time: '55239.968750'
2024-06-17 08:12:00 (20924): Guest Log: 08:02:28.273760 timesync vgsvcTimeSyncWorker: Radical host time change: 26 857 239 000 000ns (HostNow=1 718 604 720 193 000 000 ns HostLast=1 718 577 862 954 000 000 ns)
2024-06-17 08:12:10 (20924): Guest Log: 08:02:38.274556 timesync vgsvcTimeSyncWorker: Radical guest time change: 26 842 437 196 000ns (GuestNow=1 718 604 730 195 344 000 ns GuestLast=1 718 577 887 758 148 000 ns fSetTimeLastLoop=true )
2024-06-17 08:15:03 (20924): Guest Log:  *** Job finished ***
2024-06-17 08:15:03 (20924): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-06-17 08:15:03 (20924): Guest Log: 2024-06-17 06:14:49,140 | INFO     | waiting for thread to finish: ['<_MainThread(MainThread, started 139817835538240)>', '<ExcThread(queue_monitor, started 139817400649472)>']
2024-06-17 08:15:03 (20924): Guest Log: 2024-06-17 06:14:51,144 | INFO     | waiting for thread to finish: ['<_MainThread(MainThread, started 139817835538240)>', '<ExcThread(queue_monitor, started 139817400649472)>']
2024-06-17 08:15:03 (20924): Guest Log: 2024-06-17 06:14:53,148 | INFO     | waiting for thread to finish: ['<_MainThread(MainThread, started 139817835538240)>', '<ExcThread(queue_monitor, started 139817400649472)>']
2024-06-17 08:15:03 (20924): Guest Log: 2024-06-17 06:14:55,200 | INFO     | waiting for thread to finish: ['<_MainThread(MainThread, started 139817835538240)>', '<ExcThread(queue_monitor, started 139817400649472)>']
2024-06-17 08:15:03 (20924): Guest Log: 2024-06-17 06:14:57,332 | INFO     | waiting for thread to finish: ['<_MainThread(MainThread, started 139817835538240)>', '<ExcThread(queue_monitor, started 139817400649472)>']
2024-06-17 08:15:03 (20924): Guest Log: 2024-06-17 06:14:59,463 | INFO     | waiting for thread to finish: ['<_MainThread(MainThread, started 139817835538240)>', '<ExcThread(queue_monitor, started 139817400649472)>']
2024-06-17 08:15:03 (20924): Guest Log: 2024-06-17 06:15:01,646 | INFO     | waiting for thread to finish: ['<_MainThread(MainThread, started 139817835538240)>', '<ExcThread(queue_monitor, started 139817400649472)>']
2024-06-17 08:15:03 (20924): Guest Log: 2024-06-17 06:15:01,989 [wrapper] The pilot process (6396) is still running after 3m. Sending SIGKILL (9).
2024-06-17 08:15:03 (20924): Guest Log: 2024-06-17 06:15:01,993 [wrapper] The pilot process (6396) is still running after 3m. Sending SIGKILL (9).
2024-06-17 08:15:03 (20924): Guest Log: 2024-06-17 06:15:02,005 [wrapper] ==== pilot stdout END ====
2024-06-17 08:15:03 (20924): Guest Log: 2024-06-17 06:15:02,009 [wrapper] ==== wrapper stdout RESUME ====
2024-06-17 08:15:03 (20924): Guest Log: 2024-06-17 06:15:02,012 [wrapper] pilotpid: 6396
2024-06-17 08:15:03 (20924): Guest Log: 2024-06-17 06:15:02,017 [wrapper] Pilot exit status: 137
2024-06-17 08:15:03 (20924): Guest Log: 2024-06-17 06:15:02,071 [wrapper] pandaids: 6231234455
2024-06-17 08:15:03 (20924): Guest Log: 2024-06-17 06:15:02,077 [wrapper] apfmon messages muted
2024-06-17 08:15:03 (20924): Guest Log: 2024-06-17 06:15:02,103 [wrapper] No supervise_pilot CHILD process found
2024-06-17 08:15:03 (20924): Guest Log: 2024-06-17 06:15:02,107 [wrapper] Test setup, not cleaning
2024-06-17 08:15:03 (20924): Guest Log: 2024-06-17 06:15:02,111 [wrapper] ==== wrapper stdout END ====
2024-06-17 08:15:03 (20924): Guest Log: 2024-06-17 06:15:02,114 [wrapper] ==== wrapper stderr END ====
2024-06-17 08:15:03 (20924): Guest Log: 2024-06-17 06:15:02,122 [wrapper] apfmon messages muted
2024-06-17 08:15:03 (20924): Guest Log:  *** Error codes and diagnostics ***
2024-06-17 08:15:03 (20924): Guest Log:     "exeErrorCode": 0,
2024-06-17 08:15:03 (20924): Guest Log:     "exeErrorDiag": "",
2024-06-17 08:15:03 (20924): Guest Log:     "pilotErrorCode": 1200,
2024-06-17 08:15:03 (20924): Guest Log:     "pilotErrorDiag": "Job terminated by unknown kill signal",
2024-06-17 08:15:03 (20924): Guest Log:  *** Listing of results directory ***
2024-06-17 08:15:03 (20924): Guest Log: total 8756
2024-06-17 08:15:03 (20924): Guest Log: -rw-r--r--. 1 atlas atlas  469766 Jun 15 07:04 pilot3.tar.gz
2024-06-17 08:15:03 (20924): Guest Log: -rw-r--r--. 1 atlas atlas    5654 Jun 15 07:13 queuedata.json
2024-06-17 08:15:03 (20924): Guest Log: -rwx------. 1 atlas atlas   32308 Jun 15 07:13 runpilot2-wrapper.sh
2024-06-17 08:15:03 (20924): Guest Log: -rwxr-xr-x. 1 atlas atlas    9167 Jun 16 14:42 init_data.xml
2024-06-17 08:15:03 (20924): Guest Log: -rwxr-xr-x. 1 atlas atlas  482537 Jun 16 14:42 input.tar.gz
2024-06-17 08:15:03 (20924): Guest Log: -rwxr-xr-x. 1 atlas atlas   17537 Jun 16 14:42 start_atlas.sh
2024-06-17 08:15:03 (20924): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Jun 16 14:42 EVNT.38776201._000476.pool.root.1 -> /data/./ATLAS.root_0
2024-06-17 08:15:03 (20924): Guest Log: -rw-r--r--. 1 atlas atlas    2632 Jun 16 14:42 pandaJob.out
2024-06-17 08:15:03 (20924): Guest Log: -rw-------. 1 atlas atlas     424 Jun 16 14:42 setup.sh.local
2024-06-17 08:15:03 (20924): Guest Log: -rw-------. 1 atlas atlas 1020617 Jun 16 14:43 agis_schedconf.cvmfs.json
2024-06-17 08:15:03 (20924): Guest Log: -rw-------. 1 atlas atlas       0 Jun 16 14:43 agis_ddmendpoints.agis.ALL.json
2024-06-17 08:15:03 (20924): Guest Log: -rw-------. 1 atlas atlas 1316805 Jun 16 14:43 cric_ddmendpoints.json
2024-06-17 08:15:03 (20924): Guest Log: drwx------. 4 atlas atlas    4096 Jun 16 14:43 pilot3
2024-06-17 08:15:03 (20924): Guest Log: -rw-------. 1 atlas atlas     114 Jun 17 06:12 pilot_heartbeat.json
2024-06-17 08:15:03 (20924): Guest Log: drwxrwx---. 2 atlas atlas    4096 Jun 17 06:12 PanDA_Pilot-6231234455
2024-06-17 08:15:03 (20924): Guest Log: -rw-------. 1 atlas atlas    1023 Jun 17 06:12 memory_monitor_summary.json
2024-06-17 08:15:03 (20924): Guest Log: -rw-------. 1 atlas atlas    2474 Jun 17 06:12 heartbeat.json
2024-06-17 08:15:03 (20924): Guest Log: -rw-------. 1 atlas atlas 1798397 Jun 17 06:15 pilotlog.txt
2024-06-17 08:15:03 (20924): Guest Log: -rw-------. 1 atlas atlas 1811884 Jun 17 06:15 log.38921007._040882.job.log.1
2024-06-17 08:15:03 (20924): Guest Log: -rw-r--r--. 1 atlas atlas     571 Jun 17 06:15 runtime_log
2024-06-17 08:15:03 (20924): Guest Log: -rw-------. 1 atlas atlas 1822720 Jun 17 06:15 result.tar.gz
2024-06-17 08:15:03 (20924): Guest Log: -rw-r--r--. 1 atlas atlas   10240 Jun 17 06:15 runtime_log.err
2024-06-17 08:15:03 (20924): Guest Log: -rw-------. 1 atlas atlas     633 Jun 17 06:15 AawKDmPmcc5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmtsfKDm9WcwQo.diag
2024-06-17 08:15:03 (20924): Guest Log: Looking for outputfile HITS.38921007._040882.pool.root.1
2024-06-17 08:15:03 (20924): Guest Log: No HITS file was produced
2024-06-17 08:15:03 (20924): Guest Log: Successfully finished the ATLAS job!
2024-06-17 08:15:03 (20924): Guest Log: Copying the results back to the shared directory!
2024-06-17 08:15:03 (20924): Guest Log:  *** Contents of shared directory: ***
2024-06-17 08:15:03 (20924): Guest Log: total 572796
2024-06-17 08:15:03 (20924): Guest Log: -rwxrwxrwx. 1 root root 584204207 Jun 16 14:41 ATLAS.root_0
2024-06-17 08:15:03 (20924): Guest Log: -rwxrwxrwx. 1 root root      9167 Jun 16 14:41 init_data.xml
2024-06-17 08:15:03 (20924): Guest Log: -rwxrwxrwx. 1 root root    482537 Jun 15 13:25 input.tar.gz
2024-06-17 08:15:03 (20924): Guest Log: -rwxrwxrwx. 1 root root   1822720 Jun 17  2024 result.tar.gz
2024-06-17 08:15:03 (20924): Guest Log: -rwxrwxrwx. 1 root root     17537 Jun 15 13:25 start_atlas.sh
2024-06-17 08:15:03 (20924): Guest Log:  *** Success! Shutting down the machine. ***
2024-06-17 08:15:04 (20924): VM Completion File Detected.
2024-06-17 08:15:04 (20924): Powering off VM.
2024-06-17 08:15:04 (20924): Successfully stopped VM.
2024-06-17 08:15:04 (20924): Deregistering VM. (boinc_3d78a9b3a5850094, slot#0)
2024-06-17 08:15:05 (20924): Removing network bandwidth throttle group from VM.
2024-06-17 08:15:05 (20924): Removing VM from VirtualBox.
08:15:10 (20924): called boinc_finish(0)

</stderr_txt>
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