Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2024-06-15 06:33:10 (27526): Detected: vboxwrapper 26206
2024-06-15 06:33:10 (27526): Detected: BOINC client v7.24.1
2024-06-15 06:33:10 (27526): Detected: VirtualBox VboxManage Interface (Version: 7.0.18)
2024-06-15 06:33:10 (27526): Successfully copied 'init_data.xml' to the shared directory.
2024-06-15 06:33:10 (27526): Create VM. (boinc_ea00b4c642e0d5df, slot#21)
2024-06-15 06:33:11 (27526): Setting Memory Size for VM. (4000MB)
2024-06-15 06:33:11 (27526): Setting CPU Count for VM. (2)
2024-06-15 06:33:11 (27526): Setting Chipset Options for VM.
2024-06-15 06:33:11 (27526): Setting Graphics Controller Options for VM.
2024-06-15 06:33:11 (27526): Setting Boot Options for VM.
2024-06-15 06:33:11 (27526): Setting Network Configuration for NAT.
2024-06-15 06:33:11 (27526): Enabling VM Network Access.
2024-06-15 06:33:11 (27526): Disabling USB Support for VM.
2024-06-15 06:33:11 (27526): Disabling COM Port Support for VM.
2024-06-15 06:33:11 (27526): Disabling LPT Port Support for VM.
2024-06-15 06:33:11 (27526): Disabling Audio Support for VM.
2024-06-15 06:33:11 (27526): Disabling Clipboard Support for VM.
2024-06-15 06:33:11 (27526): Disabling Drag and Drop Support for VM.
2024-06-15 06:33:11 (27526): Adding storage controller(s) to VM.
2024-06-15 06:33:11 (27526): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-06-15 06:33:11 (27526): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-06-15 06:33:11 (27526): forwarding host port 39045 to guest port 80
2024-06-15 06:33:11 (27526): Enabling remote desktop for VM.
2024-06-15 06:33:11 (27526): Enabling shared directory for VM.
2024-06-15 06:33:12 (27526): Starting VM using VBoxManage interface. (boinc_ea00b4c642e0d5df, slot#21)
2024-06-15 06:33:13 (27526): Successfully started VM. (PID = '27775')
2024-06-15 06:33:13 (27526): Reporting VM Process ID to BOINC.
2024-06-15 06:33:13 (27526): Guest Log: BIOS: VirtualBox 7.0.18
2024-06-15 06:33:13 (27526): Guest Log: CPUID EDX: 0x178bfbff
2024-06-15 06:33:13 (27526): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-06-15 06:33:13 (27526): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-06-15 06:33:13 (27526): VM state change detected. (old = 'poweredoff', new = 'running')
2024-06-15 06:33:13 (27526): Detected: Web Application Enabled (http://localhost:39045)
2024-06-15 06:33:13 (27526): Detected: Remote Desktop Enabled (localhost:39893)
2024-06-15 06:33:13 (27526): Preference change detected
2024-06-15 06:33:13 (27526): Setting CPU throttle for VM. (100%)
2024-06-15 06:33:13 (27526): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2024-06-15 06:33:15 (27526): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-06-15 06:33:15 (27526): Guest Log: BIOS: Booting from Hard Disk...
2024-06-15 06:33:18 (27526): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-06-15 06:33:18 (27526): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-06-15 06:33:18 (27526): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-06-15 06:33:18 (27526): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-06-15 06:33:18 (27526): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-06-15 06:33:18 (27526): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-06-15 06:33:18 (27526): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-06-15 06:33:18 (27526): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-06-15 06:33:18 (27526): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-06-15 06:33:18 (27526): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-06-15 06:33:18 (27526): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-06-15 06:33:18 (27526): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-06-15 06:33:18 (27526): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-06-15 06:33:18 (27526): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-06-15 06:33:18 (27526): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-06-15 06:33:18 (27526): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-06-15 06:33:18 (27526): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-06-15 06:33:18 (27526): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-06-15 06:33:18 (27526): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-06-15 06:33:18 (27526): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-06-15 06:33:18 (27526): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-06-15 06:33:18 (27526): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-06-15 06:33:18 (27526): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-06-15 06:33:18 (27526): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-06-15 06:33:18 (27526): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-06-15 06:33:18 (27526): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-06-15 06:33:18 (27526): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-06-15 06:33:18 (27526): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-06-15 06:33:18 (27526): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-06-15 06:33:18 (27526): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-06-15 06:33:18 (27526): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-06-15 06:33:18 (27526): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-06-15 06:33:23 (27526): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-06-15 06:33:23 (27526): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-06-15 06:33:29 (27526): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-06-15 06:33:29 (27526): Guest Log: 00:00:00.000106 main     Log opened 2024-06-15T12:33:26.461173000Z
2024-06-15 06:33:29 (27526): Guest Log: 00:00:00.000185 main     OS Product: Linux
2024-06-15 06:33:29 (27526): Guest Log: 00:00:00.000201 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-06-15 06:33:29 (27526): Guest Log: 00:00:00.000214 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-06-15 06:33:29 (27526): Guest Log: 00:00:00.000226 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-06-15 06:33:29 (27526): Guest Log: 00:00:00.000226 main     Process ID: 1251
2024-06-15 06:33:29 (27526): Guest Log: 00:00:00.000227 main     Package type: LINUX_64BITS_GENERIC
2024-06-15 06:33:29 (27526): Guest Log: 00:00:00.000698 main     5.2.32 r132073 started. Verbose level = 0
2024-06-15 06:33:29 (27526): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-06-15 06:33:29 (27526): Guest Log: [INFO] Mounting shared directory
2024-06-15 06:33:29 (27526): Guest Log: [INFO] Checking for init_data.xml
2024-06-15 06:33:32 (27526): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-06-15 06:33:32 (27526): Guest Log: [INFO] Detected branch: prod
2024-06-15 06:33:33 (27526): Guest Log: This is the prod version of the ATLAS job wrapper
2024-06-15 06:33:33 (27526): Guest Log: Copying input files
2024-06-15 06:34:24 (27526): Guest Log: Copied input files into RunAtlas.
2024-06-15 06:34:24 (27526): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-06-15 06:34:24 (27526): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-06-15 06:34:24 (27526): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-06-15 06:34:24 (27526): Guest Log: Further information can be found at the LHC@home message board.
2024-06-15 06:34:34 (27526): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-06-15 06:34:34 (27526): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-06-15 06:34:34 (27526): Guest Log: 2.6.3.0 1525 1 32036 133904 4 1 3117205 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2024-06-15 06:34:34 (27526): Guest Log: copied the webapp to /var/www
2024-06-15 06:34:34 (27526): Guest Log: ATHENA_PROC_NUMBER=2
2024-06-15 06:34:34 (27526): Guest Log: ATHENA_CORE_NUMBER=2
2024-06-15 06:34:35 (27526): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-06-15 06:34:35 (27526): Guest Log:  *** Starting ATLAS job. (PandaID=6231205676 taskID=38920987) ***
2024-06-15 08:12:13 (27526): Status Report: Elapsed Time: '6000.000000'
2024-06-15 08:12:13 (27526): Status Report: CPU Time: '9878.370000'
2024-06-15 09:51:14 (27526): Status Report: Elapsed Time: '12000.000000'
2024-06-15 09:51:14 (27526): Status Report: CPU Time: '21747.000000'
2024-06-15 11:30:15 (27526): Status Report: Elapsed Time: '18000.000000'
2024-06-15 11:30:15 (27526): Status Report: CPU Time: '33614.470000'
2024-06-15 13:09:16 (27526): Status Report: Elapsed Time: '24000.000000'
2024-06-15 13:09:16 (27526): Status Report: CPU Time: '45479.200000'
2024-06-15 14:48:17 (27526): Status Report: Elapsed Time: '30000.000000'
2024-06-15 14:48:17 (27526): Status Report: CPU Time: '57344.030000'
2024-06-15 16:27:19 (27526): Status Report: Elapsed Time: '36000.000000'
2024-06-15 16:27:19 (27526): Status Report: CPU Time: '69211.150000'
2024-06-15 16:34:41 (27526): Guest Log:  *** Job finished ***
2024-06-15 16:34:41 (27526): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-06-15 16:34:41 (27526): Guest Log: 2024-06-15 22:34:14,637 | INFO     | [data] queue_monitor thread has finished
2024-06-15 16:34:41 (27526): Guest Log: 2024-06-15 22:34:18,466 | INFO     | job.realtimelogging is not enabled
2024-06-15 16:34:41 (27526): Guest Log: 2024-06-15 22:34:19,467 | INFO     | [payload] run_realtimelog thread has finished
2024-06-15 16:34:41 (27526): Guest Log: 2024-06-15 22:34:20,040 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140112768218944)>', '<ExcThread(monitor, started 140111924668160)>']
2024-06-15 16:34:41 (27526): Guest Log: 2024-06-15 22:34:20,454 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-06-15 16:34:41 (27526): Guest Log: 2024-06-15 22:34:20,454 | INFO     | [monitor] control thread has ended
2024-06-15 16:34:41 (27526): Guest Log: 2024-06-15 22:34:25,045 | INFO     | all workflow threads have been joined
2024-06-15 16:34:41 (27526): Guest Log: 2024-06-15 22:34:25,046 | INFO     | end of generic workflow (traces error code: 0)
2024-06-15 16:34:41 (27526): Guest Log: 2024-06-15 22:34:25,046 | INFO     | traces error code: 0
2024-06-15 16:34:41 (27526): Guest Log: 2024-06-15 22:34:25,046 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-06-15 16:34:41 (27526): Guest Log: 2024-06-15 22:34:25,125 [wrapper] ==== pilot stdout END ====
2024-06-15 16:34:41 (27526): Guest Log: 2024-06-15 22:34:25,128 [wrapper] ==== wrapper stdout RESUME ====
2024-06-15 16:34:41 (27526): Guest Log: 2024-06-15 22:34:25,132 [wrapper] pilotpid: 6381
2024-06-15 16:34:41 (27526): Guest Log: 2024-06-15 22:34:25,135 [wrapper] Pilot exit status: 0
2024-06-15 16:34:41 (27526): Guest Log: 2024-06-15 22:34:25,397 [wrapper] pandaids: 6231205676
2024-06-15 16:34:41 (27526): Guest Log: 2024-06-15 22:34:25,416 [wrapper] cleanup supervisor_pilot 21931 6382
2024-06-15 16:34:41 (27526): Guest Log: 2024-06-15 22:34:25,419 [wrapper] Test setup, not cleaning
2024-06-15 16:34:41 (27526): Guest Log: 2024-06-15 22:34:25,422 [wrapper] ==== wrapper stdout END ====
2024-06-15 16:34:41 (27526): Guest Log: 2024-06-15 22:34:25,425 [wrapper] ==== wrapper stderr END ====
2024-06-15 16:34:41 (27526): Guest Log: 2024-06-15 22:34:25,431 [wrapper] apfmon messages muted
2024-06-15 16:34:41 (27526): Guest Log:  *** Error codes and diagnostics ***
2024-06-15 16:34:41 (27526): Guest Log:     "exeErrorCode": 0,
2024-06-15 16:34:41 (27526): Guest Log:     "exeErrorDiag": "",
2024-06-15 16:34:41 (27526): Guest Log:     "pilotErrorCode": 0,
2024-06-15 16:34:41 (27526): Guest Log:     "pilotErrorDiag": "",
2024-06-15 16:34:41 (27526): Guest Log:  *** Listing of results directory ***
2024-06-15 16:34:41 (27526): Guest Log: total 341064
2024-06-15 16:34:41 (27526): Guest Log: -rw-r--r--. 1 atlas atlas    469766 Jun 15 06:22 pilot3.tar.gz
2024-06-15 16:34:41 (27526): Guest Log: -rw-r--r--. 1 atlas atlas      5654 Jun 15 06:40 queuedata.json
2024-06-15 16:34:41 (27526): Guest Log: -rwx------. 1 atlas atlas     32308 Jun 15 06:40 runpilot2-wrapper.sh
2024-06-15 16:34:41 (27526): Guest Log: -rw-r--r--. 1 atlas atlas    482531 Jun 15 12:33 input.tar.gz
2024-06-15 16:34:41 (27526): Guest Log: -rw-r--r--. 1 atlas atlas      6901 Jun 15 12:33 init_data.xml
2024-06-15 16:34:41 (27526): Guest Log: -rw-r--r--. 1 atlas atlas     17537 Jun 15 12:33 start_atlas.sh
2024-06-15 16:34:41 (27526): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun 15 12:34 EVNT.38776170._000645.pool.root.1 -> /data/./ATLAS.root_0
2024-06-15 16:34:41 (27526): Guest Log: -rw-r--r--. 1 atlas atlas      2619 Jun 15 12:34 pandaJob.out
2024-06-15 16:34:41 (27526): Guest Log: -rw-------. 1 atlas atlas       424 Jun 15 12:34 setup.sh.local
2024-06-15 16:34:41 (27526): Guest Log: -rw-------. 1 atlas atlas   1020880 Jun 15 12:35 agis_schedconf.cvmfs.json
2024-06-15 16:34:41 (27526): Guest Log: -rw-------. 1 atlas atlas   1316805 Jun 15 12:35 cric_ddmendpoints.json
2024-06-15 16:34:41 (27526): Guest Log: drwx------. 4 atlas atlas      4096 Jun 15 12:35 pilot3
2024-06-15 16:34:41 (27526): Guest Log: -rw-------. 1 atlas atlas 336678152 Jun 15 22:33 HITS.38920987._056798.pool.root.1
2024-06-15 16:34:41 (27526): Guest Log: -rw-------. 1 atlas atlas      1021 Jun 15 22:33 memory_monitor_summary.json
2024-06-15 16:34:41 (27526): Guest Log: -rw-------. 1 atlas atlas         0 Jun 15 22:33 agis_ddmendpoints.agis.ALL.json
2024-06-15 16:34:41 (27526): Guest Log: -rw-------. 1 atlas atlas    532887 Jun 15 22:33 log.38920987._056798.job.log.tgz.1
2024-06-15 16:34:41 (27526): Guest Log: -rw-------. 1 atlas atlas      7702 Jun 15 22:34 heartbeat.json
2024-06-15 16:34:41 (27526): Guest Log: -rw-------. 1 atlas atlas        95 Jun 15 22:34 pilot_heartbeat.json
2024-06-15 16:34:41 (27526): Guest Log: -rw-------. 1 atlas atlas      4343 Jun 15 22:34 pilotlog.txt
2024-06-15 16:34:41 (27526): Guest Log: -rw-------. 1 atlas atlas   4022170 Jun 15 22:34 log.38920987._056798.job.log.1
2024-06-15 16:34:41 (27526): Guest Log: -rw-------. 1 atlas atlas       357 Jun 15 22:34 output.list
2024-06-15 16:34:41 (27526): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun 15 22:34 runtime_log
2024-06-15 16:34:41 (27526): Guest Log: -rw-------. 1 atlas atlas   4577280 Jun 15 22:34 result.tar.gz
2024-06-15 16:34:41 (27526): Guest Log: -rw-r--r--. 1 atlas atlas     10913 Jun 15 22:34 runtime_log.err
2024-06-15 16:34:41 (27526): Guest Log: -rw-------. 1 atlas atlas       642 Jun 15 22:34 QrPKDmKGcc5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmyIUKDmFHXBsn.diag
2024-06-15 16:34:41 (27526): Guest Log: Looking for outputfile HITS.38920987._056798.pool.root.1
2024-06-15 16:34:41 (27526): Guest Log: HITS file was successfully produced
2024-06-15 16:34:41 (27526): Guest Log: -rw-------. 1 atlas atlas 336678152 Jun 15 22:33 /home/atlas/RunAtlas/HITS.38920987._056798.pool.root.1
2024-06-15 16:34:41 (27526): Guest Log: Successfully finished the ATLAS job!
2024-06-15 16:34:41 (27526): Guest Log: Copying the results back to the shared directory!
2024-06-15 16:34:41 (27526): Guest Log:  *** Contents of shared directory: ***
2024-06-15 16:34:41 (27526): Guest Log: total 626492
2024-06-15 16:34:41 (27526): Guest Log: -rw-r--r--. 1 root root 636431303 Jun 15 12:33 ATLAS.root_0
2024-06-15 16:34:41 (27526): Guest Log: -rw-r--r--. 1 root root      6901 Jun 15 12:33 init_data.xml
2024-06-15 16:34:41 (27526): Guest Log: -rw-r--r--. 1 root root    482531 Jun 15 12:33 input.tar.gz
2024-06-15 16:34:41 (27526): Guest Log: -rw-r--r--. 1 root root   4577280 Jun 15  2024 result.tar.gz
2024-06-15 16:34:41 (27526): Guest Log: -rw-r--r--. 1 root root     17537 Jun 15 12:33 start_atlas.sh
2024-06-15 16:34:41 (27526): Guest Log:  *** Success! Shutting down the machine. ***
2024-06-15 16:34:41 (27526): VM Completion File Detected.
2024-06-15 16:34:41 (27526): Powering off VM.
2024-06-15 16:34:42 (27526): Successfully stopped VM.
2024-06-15 16:34:42 (27526): Deregistering VM. (boinc_ea00b4c642e0d5df, slot#21)
2024-06-15 16:34:42 (27526): Removing network bandwidth throttle group from VM.
2024-06-15 16:34:42 (27526): Removing VM from VirtualBox.
16:34:47 (27526): called boinc_finish(0)

</stderr_txt>
]]>

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