Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2024-06-15 18:50:18 (34880): Detected: vboxwrapper 26206
2024-06-15 18:50:18 (34880): Detected: BOINC client v8.0.2
2024-06-15 18:50:19 (34880): Detected: VirtualBox VboxManage Interface (Version: 7.0.14)
2024-06-15 18:50:19 (34880): Successfully copied 'init_data.xml' to the shared directory.
2024-06-15 18:50:20 (34880): Create VM. (boinc_050bb7b31b515e4a, slot#10)
2024-06-15 18:50:20 (34880): Setting Memory Size for VM. (4250MB)
2024-06-15 18:50:21 (34880): Setting CPU Count for VM. (6)
2024-06-15 18:50:21 (34880): Setting Chipset Options for VM.
2024-06-15 18:50:21 (34880): Setting Graphics Controller Options for VM.
2024-06-15 18:50:21 (34880): Setting Boot Options for VM.
2024-06-15 18:50:22 (34880): Setting Network Configuration for NAT.
2024-06-15 18:50:22 (34880): Enabling VM Network Access.
2024-06-15 18:50:22 (34880): Disabling USB Support for VM.
2024-06-15 18:50:22 (34880): Disabling COM Port Support for VM.
2024-06-15 18:50:23 (34880): Disabling LPT Port Support for VM.
2024-06-15 18:50:23 (34880): Disabling Audio Support for VM.
2024-06-15 18:50:23 (34880): Disabling Clipboard Support for VM.
2024-06-15 18:50:23 (34880): Disabling Drag and Drop Support for VM.
2024-06-15 18:50:24 (34880): Adding storage controller(s) to VM.
2024-06-15 18:50:24 (34880): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-06-15 18:50:24 (34880): Adding VirtualBox Guest Additions to VM.
2024-06-15 18:50:25 (34880): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-06-15 18:50:25 (34880): forwarding host port 53578 to guest port 80
2024-06-15 18:50:25 (34880): Enabling remote desktop for VM.
2024-06-15 18:50:26 (34880): Enabling shared directory for VM.
2024-06-15 18:50:26 (34880): Starting VM using VBoxManage interface. (boinc_050bb7b31b515e4a, slot#10)
2024-06-15 18:50:34 (34880): Successfully started VM. (PID = '35996')
2024-06-15 18:50:34 (34880): Reporting VM Process ID to BOINC.
2024-06-15 18:50:34 (34880): Guest Log: BIOS: VirtualBox 7.0.14
2024-06-15 18:50:34 (34880): Guest Log: CPUID EDX: 0x178bfbff
2024-06-15 18:50:34 (34880): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-06-15 18:50:34 (34880): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-06-15 18:50:34 (34880): VM state change detected. (old = 'poweredoff', new = 'running')
2024-06-15 18:50:34 (34880): Detected: Web Application Enabled (http://localhost:53578)
2024-06-15 18:50:34 (34880): Detected: Remote Desktop Enabled (localhost:53579)
2024-06-15 18:50:34 (34880): Preference change detected
2024-06-15 18:50:34 (34880): Setting CPU throttle for VM. (100%)
2024-06-15 18:50:35 (34880): Setting checkpoint interval to 1200 seconds. (Higher value of (Preference: 1200 seconds) or (Vbox_job.xml: 900 seconds))
2024-06-15 18:50:36 (34880): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-06-15 18:50:36 (34880): Guest Log: BIOS: Booting from Hard Disk...
2024-06-15 18:50:39 (34880): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-06-15 18:50:39 (34880): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-06-15 18:50:39 (34880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-06-15 18:50:39 (34880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-06-15 18:50:39 (34880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-06-15 18:50:39 (34880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-06-15 18:50:39 (34880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-06-15 18:50:39 (34880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-06-15 18:50:39 (34880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-06-15 18:50:39 (34880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-06-15 18:50:39 (34880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-06-15 18:50:39 (34880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-06-15 18:50:39 (34880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-06-15 18:50:39 (34880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-06-15 18:50:39 (34880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-06-15 18:50:39 (34880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-06-15 18:50:39 (34880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-06-15 18:50:39 (34880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-06-15 18:50:39 (34880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-06-15 18:50:39 (34880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-06-15 18:50:39 (34880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-06-15 18:50:39 (34880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-06-15 18:50:39 (34880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-06-15 18:50:39 (34880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-06-15 18:50:39 (34880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-06-15 18:50:39 (34880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-06-15 18:50:39 (34880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-06-15 18:50:39 (34880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-06-15 18:50:39 (34880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-06-15 18:50:39 (34880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-06-15 18:50:39 (34880): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-06-15 18:50:39 (34880): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-06-15 18:50:44 (34880): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-06-15 18:50:44 (34880): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-06-15 18:50:49 (34880): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-06-15 18:50:49 (34880): Guest Log: 00:00:00.000207 main     Log opened 2024-06-15T18:50:48.285968000Z
2024-06-15 18:50:49 (34880): Guest Log: 00:00:00.001451 main     OS Product: Linux
2024-06-15 18:50:49 (34880): Guest Log: 00:00:00.001481 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-06-15 18:50:49 (34880): Guest Log: 00:00:00.001546 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-06-15 18:50:49 (34880): Guest Log: 00:00:00.001570 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-06-15 18:50:49 (34880): Guest Log: 00:00:00.001571 main     Process ID: 1323
2024-06-15 18:50:49 (34880): Guest Log: 00:00:00.001571 main     Package type: LINUX_64BITS_GENERIC
2024-06-15 18:50:49 (34880): Guest Log: 00:00:00.003008 main     5.2.32 r132073 started. Verbose level = 0
2024-06-15 18:50:49 (34880): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-06-15 18:50:49 (34880): Guest Log: [INFO] Mounting shared directory
2024-06-15 18:50:50 (34880): Guest Log: [INFO] Checking for init_data.xml
2024-06-15 18:50:55 (34880): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-06-15 18:50:55 (34880): Guest Log: [INFO] Detected branch: prod
2024-06-15 18:50:55 (34880): Guest Log: This is the prod version of the ATLAS job wrapper
2024-06-15 18:50:55 (34880): Guest Log: Copying input files
2024-06-15 18:50:58 (34880): Guest Log: Copied input files into RunAtlas.
2024-06-15 18:50:58 (34880): Guest Log: Detected user-configured HTTP proxy at http://10.116.178.201:3128 - will set in /etc/cvmfs/default.local
2024-06-15 18:50:59 (34880): Guest Log: 00:00:10.008637 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 542 191 000ns (GuestNow=1 718 470 259 748 081 000 ns GuestLast=1 718 477 448 290 272 000 ns fSetTimeLastLoop=true )
2024-06-15 18:51:12 (34880): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-06-15 18:51:12 (34880): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-06-15 18:51:12 (34880): Guest Log: 2.6.3.0 1599 0 31656 133910 4 1 3117205 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://10.116.178.201:3128 1
2024-06-15 18:51:13 (34880): Guest Log: copied the webapp to /var/www
2024-06-15 18:51:13 (34880): Guest Log: ATHENA_PROC_NUMBER=6
2024-06-15 18:51:13 (34880): Guest Log: ATHENA_CORE_NUMBER=6
2024-06-15 18:51:13 (34880): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-06-15 18:51:13 (34880): Guest Log:  *** Starting ATLAS job. (PandaID=6231138948 taskID=38921013) ***
2024-06-15 20:30:37 (34880): Status Report: Elapsed Time: '6000.000000'
2024-06-15 20:30:37 (34880): Status Report: CPU Time: '29815.843750'
2024-06-15 22:10:40 (34880): Status Report: Elapsed Time: '12000.000000'
2024-06-15 22:10:40 (34880): Status Report: CPU Time: '63390.406250'
2024-06-15 23:50:43 (34880): Status Report: Elapsed Time: '18000.000000'
2024-06-15 23:50:43 (34880): Status Report: CPU Time: '97393.687500'
2024-06-16 01:05:53 (34880): Guest Log:  *** Job finished ***
2024-06-16 01:05:53 (34880): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-06-16 01:05:53 (34880): Guest Log: 2024-06-15 23:05:30,321 | INFO     | [data] queue_monitor thread has finished
2024-06-16 01:05:53 (34880): Guest Log: 2024-06-15 23:05:34,054 | INFO     | job.realtimelogging is not enabled
2024-06-16 01:05:53 (34880): Guest Log: 2024-06-15 23:05:35,097 | INFO     | [payload] run_realtimelog thread has finished
2024-06-16 01:05:53 (34880): Guest Log: 2024-06-15 23:05:37,258 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140467817359168)>', '<ExcThread(monitor, started 140467089954560)>']
2024-06-16 01:05:53 (34880): Guest Log: 2024-06-15 23:05:37,445 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-06-16 01:05:53 (34880): Guest Log: 2024-06-15 23:05:37,445 | INFO     | [monitor] control thread has ended
2024-06-16 01:05:53 (34880): Guest Log: 2024-06-15 23:05:42,285 | INFO     | all workflow threads have been joined
2024-06-16 01:05:53 (34880): Guest Log: 2024-06-15 23:05:42,285 | INFO     | end of generic workflow (traces error code: 0)
2024-06-16 01:05:53 (34880): Guest Log: 2024-06-15 23:05:42,285 | INFO     | traces error code: 0
2024-06-16 01:05:53 (34880): Guest Log: 2024-06-15 23:05:42,286 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-06-16 01:05:53 (34880): Guest Log: 2024-06-15 23:05:42,366 [wrapper] ==== pilot stdout END ====
2024-06-16 01:05:53 (34880): Guest Log: 2024-06-15 23:05:42,372 [wrapper] ==== wrapper stdout RESUME ====
2024-06-16 01:05:53 (34880): Guest Log: 2024-06-15 23:05:42,377 [wrapper] pilotpid: 6511
2024-06-16 01:05:53 (34880): Guest Log: 2024-06-15 23:05:42,385 [wrapper] Pilot exit status: 0
2024-06-16 01:05:53 (34880): Guest Log: 2024-06-15 23:05:42,416 [wrapper] pandaids: 6231138948
2024-06-16 01:05:53 (34880): Guest Log: 2024-06-15 23:05:42,458 [wrapper] cleanup supervisor_pilot 26305 6512
2024-06-16 01:05:53 (34880): Guest Log: 2024-06-15 23:05:42,465 [wrapper] Test setup, not cleaning
2024-06-16 01:05:53 (34880): Guest Log: 2024-06-15 23:05:42,472 [wrapper] ==== wrapper stdout END ====
2024-06-16 01:05:53 (34880): Guest Log: 2024-06-15 23:05:42,478 [wrapper] ==== wrapper stderr END ====
2024-06-16 01:05:53 (34880): Guest Log: 2024-06-15 23:05:42,491 [wrapper] apfmon messages muted
2024-06-16 01:05:53 (34880): Guest Log:  *** Error codes and diagnostics ***
2024-06-16 01:05:53 (34880): Guest Log:     "exeErrorCode": 0,
2024-06-16 01:05:53 (34880): Guest Log:     "exeErrorDiag": "",
2024-06-16 01:05:53 (34880): Guest Log:     "pilotErrorCode": 0,
2024-06-16 01:05:53 (34880): Guest Log:     "pilotErrorDiag": "",
2024-06-16 01:05:53 (34880): Guest Log:  *** Listing of results directory ***
2024-06-16 01:05:53 (34880): Guest Log: total 346260
2024-06-16 01:05:53 (34880): Guest Log: -rw-r--r--. 1 atlas atlas    469766 Jun 15 04:23 pilot3.tar.gz
2024-06-16 01:05:53 (34880): Guest Log: -rw-r--r--. 1 atlas atlas      5654 Jun 15 04:29 queuedata.json
2024-06-16 01:05:53 (34880): Guest Log: -rwx------. 1 atlas atlas     32308 Jun 15 04:31 runpilot2-wrapper.sh
2024-06-16 01:05:53 (34880): Guest Log: -rwxr-xr-x. 1 atlas atlas      9013 Jun 15 16:50 init_data.xml
2024-06-16 01:05:53 (34880): Guest Log: -rwxr-xr-x. 1 atlas atlas     17537 Jun 15 16:50 start_atlas.sh
2024-06-16 01:05:53 (34880): Guest Log: -rwxr-xr-x. 1 atlas atlas    482537 Jun 15 16:50 input.tar.gz
2024-06-16 01:05:53 (34880): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun 15 16:50 EVNT.38776210._000542.pool.root.1 -> /data/./ATLAS.root_0
2024-06-16 01:05:53 (34880): Guest Log: -rw-r--r--. 1 atlas atlas      2644 Jun 15 16:51 pandaJob.out
2024-06-16 01:05:53 (34880): Guest Log: -rw-------. 1 atlas atlas       461 Jun 15 16:51 setup.sh.local
2024-06-16 01:05:53 (34880): Guest Log: -rw-------. 1 atlas atlas   1020864 Jun 15 16:52 agis_schedconf.cvmfs.json
2024-06-16 01:05:53 (34880): Guest Log: -rw-------. 1 atlas atlas   1316805 Jun 15 16:52 cric_ddmendpoints.json
2024-06-16 01:05:53 (34880): Guest Log: drwx------. 4 atlas atlas      4096 Jun 15 16:52 pilot3
2024-06-16 01:05:53 (34880): Guest Log: -rw-------. 1 atlas atlas 347023318 Jun 15 23:04 HITS.38921013._037326.pool.root.1
2024-06-16 01:05:53 (34880): Guest Log: -rw-------. 1 atlas atlas        95 Jun 15 23:04 pilot_heartbeat.json
2024-06-16 01:05:53 (34880): Guest Log: -rw-------. 1 atlas atlas      1036 Jun 15 23:05 memory_monitor_summary.json
2024-06-16 01:05:53 (34880): Guest Log: -rw-------. 1 atlas atlas         0 Jun 15 23:05 agis_ddmendpoints.agis.ALL.json
2024-06-16 01:05:53 (34880): Guest Log: -rw-------. 1 atlas atlas    389791 Jun 15 23:05 log.38921013._037326.job.log.tgz.1
2024-06-16 01:05:53 (34880): Guest Log: -rw-------. 1 atlas atlas      7731 Jun 15 23:05 heartbeat.json
2024-06-16 01:05:53 (34880): Guest Log: -rw-------. 1 atlas atlas      4466 Jun 15 23:05 pilotlog.txt
2024-06-16 01:05:53 (34880): Guest Log: -rw-------. 1 atlas atlas   1652513 Jun 15 23:05 log.38921013._037326.job.log.1
2024-06-16 01:05:53 (34880): Guest Log: -rw-------. 1 atlas atlas       357 Jun 15 23:05 output.list
2024-06-16 01:05:53 (34880): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun 15 23:05 runtime_log
2024-06-16 01:05:53 (34880): Guest Log: -rw-------. 1 atlas atlas   2058240 Jun 15 23:05 result.tar.gz
2024-06-16 01:05:53 (34880): Guest Log: -rw-------. 1 atlas atlas       646 Jun 15 23:05 wqpKDmSFac5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmolfKDmkSvh8m.diag
2024-06-16 01:05:53 (34880): Guest Log: -rw-r--r--. 1 atlas atlas     11291 Jun 15 23:05 runtime_log.err
2024-06-16 01:05:53 (34880): Guest Log: Looking for outputfile HITS.38921013._037326.pool.root.1
2024-06-16 01:05:53 (34880): Guest Log: HITS file was successfully produced
2024-06-16 01:05:53 (34880): Guest Log: -rw-------. 1 atlas atlas 347023318 Jun 15 23:04 /home/atlas/RunAtlas/HITS.38921013._037326.pool.root.1
2024-06-16 01:05:54 (34880): Guest Log: Successfully finished the ATLAS job!
2024-06-16 01:05:54 (34880): Guest Log: Copying the results back to the shared directory!
2024-06-16 01:05:55 (34880): Guest Log:  *** Contents of shared directory: ***
2024-06-16 01:05:55 (34880): Guest Log: total 869448
2024-06-16 01:05:55 (34880): Guest Log: -rwxrwxrwx. 1 root root 540712062 Jun 15 16:50 ATLAS.root_0
2024-06-16 01:05:55 (34880): Guest Log: -rwxrwxrwx. 1 root root 347023318 Jun 15  2024 HITS.pool.root.1
2024-06-16 01:05:55 (34880): Guest Log: -rwxrwxrwx. 1 root root      9013 Jun 15 16:50 init_data.xml
2024-06-16 01:05:55 (34880): Guest Log: -rwxrwxrwx. 1 root root    482537 Jun 15 10:13 input.tar.gz
2024-06-16 01:05:55 (34880): Guest Log: -rwxrwxrwx. 1 root root   2058240 Jun 15  2024 result.tar.gz
2024-06-16 01:05:55 (34880): Guest Log: -rwxrwxrwx. 1 root root     17537 Jun 15 10:13 start_atlas.sh
2024-06-16 01:05:55 (34880): Guest Log:  *** Success! Shutting down the machine. ***
2024-06-16 01:05:55 (34880): VM Completion File Detected.
2024-06-16 01:05:55 (34880): Powering off VM.
2024-06-16 01:05:56 (34880): Successfully stopped VM.
2024-06-16 01:05:56 (34880): Deregistering VM. (boinc_050bb7b31b515e4a, slot#10)
2024-06-16 01:05:56 (34880): Removing network bandwidth throttle group from VM.
2024-06-16 01:05:56 (34880): Removing VM from VirtualBox.
01:06:01 (34880): called boinc_finish(0)

</stderr_txt>
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