Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:39:44 (817201): wrapper (7.7.26015): starting
02:39:44 (817201): wrapper: running run_atlas (--nthreads 4)
[2024-06-17 02:39:44] Arguments: --nthreads 4
[2024-06-17 02:39:44] Threads: 4
[2024-06-17 02:39:44] Checking for CVMFS
[2024-06-17 02:39:44] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-17 02:39:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-17 02:39:44] Running cvmfs_config stat atlas.cern.ch
[2024-06-17 02:39:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-17 02:39:45] 2.11.3.0 202150 1117 58868 133946 0 188 25114760 31457280 4487 130560 0 2546013 99.993 223103 694 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2024-06-17 02:39:45] CVMFS is ok
[2024-06-17 02:39:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-17 02:39:45] Small home clusters do not require a local http proxy but it is suggested if
[2024-06-17 02:39:45] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2024-06-17 02:39:45] Further information can be found at the LHC@home message board.
[2024-06-17 02:39:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-17 02:39:45] Checking for apptainer binary...
[2024-06-17 02:39:45] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-17 02:39:45] Running /usr/bin/apptainer --version
[2024-06-17 02:39:45] apptainer version 1.3.1-1.el9
[2024-06-17 02:39:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-17 02:39:45] Atto003
[2024-06-17 02:39:45] apptainer works
[2024-06-17 02:39:45] Set ATHENA_PROC_NUMBER=4
[2024-06-17 02:39:45] Set ATHENA_CORE_NUMBER=4
[2024-06-17 02:39:45] Starting ATLAS job with PandaID=6231043087
[2024-06-17 02:39:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-17 10:11:17]  *** The last 200 lines of the pilot log: ***
[2024-06-17 10:11:17] 2024-06-17 01:10:55,879 | INFO     | chi2: 4.866943376484757
[2024-06-17 10:11:17] 2024-06-17 01:10:55,879 | INFO     | model: linear, x: [1718559616.0, 1718559677.0, 1718559738.0, 1718559799.0, 1718559860.0, 1718559921.0, 1718559982.0, 1718560043.0, 1718560104.0, 1718560165.0, 1718
[2024-06-17 10:11:17] 2024-06-17 01:10:55,879 | INFO     | sum of square deviations: 26055444809.5
[2024-06-17 10:11:17] 2024-06-17 01:10:55,883 | INFO     | sum of deviations: 277203016048.50006
[2024-06-17 10:11:17] 2024-06-17 01:10:55,883 | INFO     | mean x: 1718572944.5
[2024-06-17 10:11:17] 2024-06-17 01:10:55,883 | INFO     | mean y: 2354525.0251141554
[2024-06-17 10:11:17] 2024-06-17 01:10:55,883 | INFO     | -- intersect: -18281486222.957626
[2024-06-17 10:11:17] 2024-06-17 01:10:55,883 | INFO     | intersect: -18281486222.957626
[2024-06-17 10:11:17] 2024-06-17 01:10:55,884 | INFO     | chi2: 4.867727160965798
[2024-06-17 10:11:17] 2024-06-17 01:10:55,884 | INFO     | current chi2=4.867727160965798 (change=-0.01610424491125516 %)
[2024-06-17 10:11:17] 2024-06-17 01:10:55,884 | INFO     | right removable region: 437
[2024-06-17 10:11:17] 2024-06-17 01:10:55,884 | INFO     | model: linear, x: [1718559921.0, 1718559982.0, 1718560043.0, 1718560104.0, 1718560165.0, 1718560226.0, 1718560287.0, 1718560348.0, 1718560409.0, 1718560470.0, 1718
[2024-06-17 10:11:17] 2024-06-17 01:10:55,884 | INFO     | sum of square deviations: 26055444809.5
[2024-06-17 10:11:17] 2024-06-17 01:10:55,888 | INFO     | sum of deviations: 174366976524.9999
[2024-06-17 10:11:17] 2024-06-17 01:10:55,888 | INFO     | mean x: 1718573249.5
[2024-06-17 10:11:17] 2024-06-17 01:10:55,888 | INFO     | mean y: 2373350.785388128
[2024-06-17 10:11:17] 2024-06-17 01:10:55,888 | INFO     | -- intersect: -11498578701.386074
[2024-06-17 10:11:17] 2024-06-17 01:10:55,888 | INFO     | intersect: -11498578701.386074
[2024-06-17 10:11:17] 2024-06-17 01:10:55,889 | INFO     | chi2: 2.369448663499461
[2024-06-17 10:11:17] 2024-06-17 01:10:55,889 | INFO     | current chi2=2.369448663499461 (change=51.31546680925554 %)
[2024-06-17 10:11:17] 2024-06-17 01:10:55,889 | INFO     | model: linear, x: [1718560226.0, 1718560287.0, 1718560348.0, 1718560409.0, 1718560470.0, 1718560531.0, 1718560592.0, 1718560653.0, 1718560714.0, 1718560775.0, 1718
[2024-06-17 10:11:17] 2024-06-17 01:10:55,889 | INFO     | sum of square deviations: 25173279432.0
[2024-06-17 10:11:17] 2024-06-17 01:10:55,893 | INFO     | sum of deviations: 93314313971.99998
[2024-06-17 10:11:17] 2024-06-17 01:10:55,893 | INFO     | mean x: 1718573402.0
[2024-06-17 10:11:17] 2024-06-17 01:10:55,893 | INFO     | mean y: 2387360.2563510393
[2024-06-17 10:11:17] 2024-06-17 01:10:55,893 | INFO     | -- intersect: -6368157186.843806
[2024-06-17 10:11:17] 2024-06-17 01:10:55,893 | INFO     | intersect: -6368157186.843806
[2024-06-17 10:11:17] 2024-06-17 01:10:55,893 | INFO     | chi2: 1.055671504640531
[2024-06-17 10:11:17] 2024-06-17 01:10:55,893 | INFO     | current chi2=1.055671504640531 (change=55.44653400165252 %)
[2024-06-17 10:11:17] 2024-06-17 01:10:55,894 | INFO     | model: linear, x: [1718560531.0, 1718560592.0, 1718560653.0, 1718560714.0, 1718560775.0, 1718560836.0, 1718560897.0, 1718560958.0, 1718561019.0, 1718561080.0, 1718
[2024-06-17 10:11:17] 2024-06-17 01:10:55,894 | INFO     | sum of square deviations: 24311253967.0
[2024-06-17 10:11:17] 2024-06-17 01:10:55,897 | INFO     | sum of deviations: 26482375727.0
[2024-06-17 10:11:17] 2024-06-17 01:10:55,897 | INFO     | mean x: 1718573554.5
[2024-06-17 10:11:17] 2024-06-17 01:10:55,897 | INFO     | mean y: 2399165.14953271
[2024-06-17 10:11:17] 2024-06-17 01:10:55,897 | INFO     | -- intersect: -1869651969.9557397
[2024-06-17 10:11:17] 2024-06-17 01:10:55,898 | INFO     | intersect: -1869651969.9557397
[2024-06-17 10:11:17] 2024-06-17 01:10:55,898 | INFO     | chi2: 0.060855363230067135
[2024-06-17 10:11:17] 2024-06-17 01:10:55,898 | INFO     | current chi2=0.060855363230067135 (change=94.23538828484443 %)
[2024-06-17 10:11:17] 2024-06-17 01:10:55,898 | INFO     | model: linear, x: [1718560836.0, 1718560897.0, 1718560958.0, 1718561019.0, 1718561080.0, 1718561141.0, 1718561202.0, 1718561263.0, 1718561324.0, 1718561385.0, 1718
[2024-06-17 10:11:17] 2024-06-17 01:10:55,899 | INFO     | sum of square deviations: 23469135852.0
[2024-06-17 10:11:17] 2024-06-17 01:10:55,902 | INFO     | sum of deviations: 28147352671.000004
[2024-06-17 10:11:17] 2024-06-17 01:10:55,902 | INFO     | mean x: 1718573707.0
[2024-06-17 10:11:17] 2024-06-17 01:10:55,902 | INFO     | mean y: 2398858.513002364
[2024-06-17 10:11:17] 2024-06-17 01:10:55,902 | INFO     | -- intersect: -2058746491.1533144
[2024-06-17 10:11:17] 2024-06-17 01:10:55,902 | INFO     | intersect: -2058746491.1533144
[2024-06-17 10:11:17] 2024-06-17 01:10:55,902 | INFO     | chi2: 0.05490848863596655
[2024-06-17 10:11:17] 2024-06-17 01:10:55,903 | INFO     | current chi2=0.05490848863596655 (change=9.772145425569297 %)
[2024-06-17 10:11:17] 2024-06-17 01:10:55,903 | INFO     | left removable region: 40
[2024-06-17 10:11:17] 2024-06-17 01:10:55,903 | INFO     | model: linear, x: [1718562056.0, 1718562117.0, 1718562178.0, 1718562239.0, 1718562300.0, 1718562361.0, 1718562422.0, 1718562483.0, 1718562544.0, 1718562605.0, 1718
[2024-06-17 10:11:17] 2024-06-17 01:10:55,903 | INFO     | sum of square deviations: 19402030758.0
[2024-06-17 10:11:17] 2024-06-17 01:10:55,906 | INFO     | sum of deviations: 42059390261.0
[2024-06-17 10:11:17] 2024-06-17 01:10:55,906 | INFO     | mean x: 1718574134.0
[2024-06-17 10:11:17] 2024-06-17 01:10:55,906 | INFO     | mean y: 2395581.6246851385
[2024-06-17 10:11:17] 2024-06-17 01:10:55,906 | INFO     | -- intersect: -3723100017.054445
[2024-06-17 10:11:17] 2024-06-17 01:10:55,906 | INFO     | intersect: -3723100017.054445
[2024-06-17 10:11:17] 2024-06-17 01:10:55,907 | INFO     | chi2: 0.003683513265181953
[2024-06-17 10:11:17] 2024-06-17 01:10:55,907 | INFO     | -- intersect: -3723100017.054445
[2024-06-17 10:11:17] 2024-06-17 01:10:55,907 | INFO     | current memory leak: 2.17 B/s (using 397 data points, chi2=0.00)
[2024-06-17 10:11:17] 2024-06-17 01:10:55,907 | INFO     | ..............................
[2024-06-17 10:11:17] 2024-06-17 01:10:55,907 | INFO     | . Timing measurements:
[2024-06-17 10:11:17] 2024-06-17 01:10:55,907 | INFO     | . get job = 0 s
[2024-06-17 10:11:17] 2024-06-17 01:10:55,907 | INFO     | . initial setup = 3 s
[2024-06-17 10:11:17] 2024-06-17 01:10:55,908 | INFO     | . payload setup = 3 s
[2024-06-17 10:11:17] 2024-06-17 01:10:55,908 | INFO     | . stage-in = 0 s
[2024-06-17 10:11:17] 2024-06-17 01:10:55,908 | INFO     | . payload execution = 27025 s
[2024-06-17 10:11:17] 2024-06-17 01:10:55,908 | INFO     | . stage-out = 3 s
[2024-06-17 10:11:17] 2024-06-17 01:10:55,908 | INFO     | . log creation = 0 s
[2024-06-17 10:11:17] 2024-06-17 01:10:55,908 | INFO     | ..............................
[2024-06-17 10:11:17] 2024-06-17 01:10:56,227 | INFO     | 
[2024-06-17 10:11:17] 2024-06-17 01:10:56,227 | INFO     | job summary report
[2024-06-17 10:11:17] 2024-06-17 01:10:56,227 | INFO     | --------------------------------------------------
[2024-06-17 10:11:17] 2024-06-17 01:10:56,227 | INFO     | PanDA job id: 6231043087
[2024-06-17 10:11:17] 2024-06-17 01:10:56,227 | INFO     | task id: 38921001
[2024-06-17 10:11:17] 2024-06-17 01:10:56,227 | INFO     | errors: (none)
[2024-06-17 10:11:17] 2024-06-17 01:10:56,227 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-17 10:11:17] 2024-06-17 01:10:56,227 | INFO     | pilot state: finished 
[2024-06-17 10:11:17] 2024-06-17 01:10:56,227 | INFO     | transexitcode: 0
[2024-06-17 10:11:17] 2024-06-17 01:10:56,227 | INFO     | exeerrorcode: 0
[2024-06-17 10:11:17] 2024-06-17 01:10:56,227 | INFO     | exeerrordiag: 
[2024-06-17 10:11:17] 2024-06-17 01:10:56,227 | INFO     | exitcode: 0
[2024-06-17 10:11:17] 2024-06-17 01:10:56,228 | INFO     | exitmsg: OK
[2024-06-17 10:11:17] 2024-06-17 01:10:56,228 | INFO     | cpuconsumptiontime: 98551 s
[2024-06-17 10:11:17] 2024-06-17 01:10:56,228 | INFO     | nevents: 400
[2024-06-17 10:11:17] 2024-06-17 01:10:56,228 | INFO     | neventsw: 0
[2024-06-17 10:11:17] 2024-06-17 01:10:56,228 | INFO     | pid: 828135
[2024-06-17 10:11:17] 2024-06-17 01:10:56,228 | INFO     | pgrp: 828135
[2024-06-17 10:11:17] 2024-06-17 01:10:56,228 | INFO     | corecount: 4
[2024-06-17 10:11:17] 2024-06-17 01:10:56,228 | INFO     | event service: False
[2024-06-17 10:11:17] 2024-06-17 01:10:56,228 | INFO     | sizes: {0: 2379183, 4: 2379389, 11: 2379417, 27032: 2416010, 27036: 2425026, 27047: 2425140}
[2024-06-17 10:11:17] 2024-06-17 01:10:56,228 | INFO     | --------------------------------------------------
[2024-06-17 10:11:17] 2024-06-17 01:10:56,228 | INFO     | 
[2024-06-17 10:11:17] 2024-06-17 01:10:56,228 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2024-06-17 10:11:17] 2024-06-17 01:10:56,246 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-17 10:11:17] 2024-06-17 01:10:56,246 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-17 10:11:17] 2024-06-17 01:10:56,246 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-17 10:11:17] 2024-06-17 01:10:56,246 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-17 10:11:17] 2024-06-17 01:10:56,246 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-17 10:11:17] 2024-06-17 01:10:56,247 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-17 10:11:17] 2024-06-17 01:10:56,247 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-17 10:11:17] 2024-06-17 01:10:56,247 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-17 10:11:17] 2024-06-17 01:10:56,247 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-17 10:11:17] 2024-06-17 01:10:56,247 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-17 10:11:17] 2024-06-17 01:10:56,247 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-17 10:11:17] 2024-06-17 01:10:56,247 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-17 10:11:17] 2024-06-17 01:10:56,247 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-17 10:11:17] 2024-06-17 01:10:56,247 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-17 10:11:17] 2024-06-17 01:10:56,247 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-17 10:11:17] 2024-06-17 01:10:56,247 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-17 10:11:17] 2024-06-17 01:10:56,247 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-17 10:11:17] 2024-06-17 01:10:56,247 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-17 10:11:17] 2024-06-17 01:10:56,247 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-17 10:11:17] 2024-06-17 01:10:56,248 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-17 10:11:17] 2024-06-17 01:10:56,248 | INFO     | job 6231043087 has completed (purged errors)
[2024-06-17 10:11:17] 2024-06-17 01:10:56,248 | INFO     | overall cleanup function is called
[2024-06-17 10:11:17] 2024-06-17 01:10:57,254 | INFO     | --- collectZombieJob: --- 10, [828135]
[2024-06-17 10:11:17] 2024-06-17 01:10:57,255 | INFO     | zombie collector waiting for pid 828135
[2024-06-17 10:11:17] 2024-06-17 01:10:57,255 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-17 10:11:17] 2024-06-17 01:10:58,259 | INFO     | collected zombie processes
[2024-06-17 10:11:17] 2024-06-17 01:10:58,259 | INFO     | will now attempt to kill all subprocesses of pid=828135
[2024-06-17 10:11:17] 2024-06-17 01:10:58,354 | INFO     | process IDs to be killed: [828135] (in reverse order)
[2024-06-17 10:11:17] 2024-06-17 01:10:58,411 | WARNING  | found no corresponding commands to process id(s)
[2024-06-17 10:11:17] 2024-06-17 01:10:58,411 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-17 10:11:17] 2024-06-17 01:10:58,416 | INFO     | did not find any defunct processes belonging to 828135
[2024-06-17 10:11:17] 2024-06-17 01:10:58,420 | INFO     | did not find any defunct processes belonging to 828135
[2024-06-17 10:11:17] 2024-06-17 01:10:58,421 | INFO     | ready for new job
[2024-06-17 10:11:17] 2024-06-17 01:10:58,421 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-17 10:11:17] 2024-06-17 01:10:58,422 | INFO     | *************************************
[2024-06-17 10:11:17] 2024-06-17 01:10:58,423 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-17 10:11:17] 2024-06-17 01:10:58,423 | INFO     | *************************************
[2024-06-17 10:11:17] 2024-06-17 01:10:58,423 | INFO     | 
[2024-06-17 10:11:17] 2024-06-17 01:10:58,435 | INFO     | architecture information:
[2024-06-17 10:11:17] 2024-06-17 01:10:58,435 | INFO     | executing command: cat /etc/os-release
[2024-06-17 10:11:17] 2024-06-17 01:10:58,447 | INFO     | cat /etc/os-release:
[2024-06-17 10:11:17] NAME="CentOS Linux"
[2024-06-17 10:11:17] VERSION="7 (Core)"
[2024-06-17 10:11:17] ID="centos"
[2024-06-17 10:11:17] ID_LIKE="rhel fedora"
[2024-06-17 10:11:17] VERSION_ID="7"
[2024-06-17 10:11:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-17 10:11:17] ANSI_COLOR="0;31"
[2024-06-17 10:11:17] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-17 10:11:17] HOME_URL="https://www.centos.org/"
[2024-06-17 10:11:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-17 10:11:17] 
[2024-06-17 10:11:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-17 10:11:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-17 10:11:17] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-17 10:11:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-17 10:11:17] 
[2024-06-17 10:11:17] 2024-06-17 01:10:58,447 | INFO     | *************************************
[2024-06-17 10:11:17] 2024-06-17 01:10:58,949 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2024-06-17 10:11:17] 2024-06-17 01:10:58,961 | INFO     | sufficient remaining disk space (116812414976 B)
[2024-06-17 10:11:17] 2024-06-17 01:10:58,961 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-17 10:11:17] 2024-06-17 01:10:58,962 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-17 10:11:17] 2024-06-17 01:10:58,962 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-17 10:11:17] 2024-06-17 01:10:58,962 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-17 10:11:17] 2024-06-17 01:10:58,962 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-17 10:11:17] 2024-06-17 01:10:58,962 | INFO     | found 0 job(s) in 20 queues
[2024-06-17 10:11:17] 2024-06-17 01:10:58,962 | INFO     | aborting loop
[2024-06-17 10:11:17] 2024-06-17 01:10:58,962 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-17 10:11:17] 2024-06-17 01:10:58,962 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-17 10:11:17] 2024-06-17 01:10:59,207 | INFO     | all job control threads have been joined
[2024-06-17 10:11:17] 2024-06-17 01:10:59,232 | INFO     | all data control threads have been joined
[2024-06-17 10:11:17] 2024-06-17 01:10:59,967 | INFO     | [job] retrieve thread has finished
[2024-06-17 10:11:17] 2024-06-17 01:10:59,967 | INFO     | [job] job monitor thread has finished
[2024-06-17 10:11:17] 2024-06-17 01:11:00,096 | INFO     | [payload] validate_pre thread has finished
[2024-06-17 10:11:17] 2024-06-17 01:11:00,177 | INFO     | [payload] execute_payloads thread has finished
[2024-06-17 10:11:17] 2024-06-17 01:11:00,210 | INFO     | all payload control threads have been joined
[2024-06-17 10:11:17] 2024-06-17 01:11:00,212 | INFO     | [job] control thread has finished
[2024-06-17 10:11:17] 2024-06-17 01:11:00,237 | INFO     | [data] control thread has finished
[2024-06-17 10:11:17] 2024-06-17 01:11:00,301 | INFO     | [job] create_data_payload thread has finished
[2024-06-17 10:11:17] 2024-06-17 01:11:00,585 | INFO     | [payload] failed_post thread has finished
[2024-06-17 10:11:17] 2024-06-17 01:11:00,760 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-17 10:11:17] 2024-06-17 01:11:00,972 | INFO     | [data] copytool_out thread has finished
[2024-06-17 10:11:17] 2024-06-17 01:11:00,998 | INFO     | [data] copytool_in thread has finished
[2024-06-17 10:11:17] 2024-06-17 01:11:01,002 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-17 10:11:17] 2024-06-17 01:11:01,152 | INFO     | [job] validate thread has finished
[2024-06-17 10:11:17] 2024-06-17 01:11:01,215 | INFO     | [payload] control thread has finished
[2024-06-17 10:11:17] 2024-06-17 01:11:01,456 | INFO     | [payload] validate_post thread has finished
[2024-06-17 10:11:17] 2024-06-17 01:11:02,007 | INFO     | [job] queue monitor thread has finished
[2024-06-17 10:11:17] 2024-06-17 01:11:04,766 | INFO     | [data] queue_monitor thread has finished
[2024-06-17 10:11:17] 2024-06-17 01:11:09,474 | INFO     | job.realtimelogging is not enabled
[2024-06-17 10:11:17] 2024-06-17 01:11:10,479 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-17 10:11:17] 2024-06-17 01:11:12,260 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140620519089984)>', '<ExcThread(monitor, started 140619896837888)>']
[2024-06-17 10:11:17] 2024-06-17 01:11:13,028 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-17 10:11:17] 2024-06-17 01:11:13,028 | INFO     | [monitor] control thread has ended
[2024-06-17 10:11:17] 2024-06-17 01:11:17,285 | INFO     | all workflow threads have been joined
[2024-06-17 10:11:17] 2024-06-17 01:11:17,285 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-17 10:11:17] 2024-06-17 01:11:17,285 | INFO     | traces error code: 0
[2024-06-17 10:11:17] 2024-06-17 01:11:17,286 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-17 10:11:17] 2024-06-17 01:11:17,350 [wrapper] ==== pilot stdout END ====
[2024-06-17 10:11:17] 2024-06-17 01:11:17,352 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-17 10:11:17] 2024-06-17 01:11:17,354 [wrapper] pilotpid: 821509
[2024-06-17 10:11:17] 2024-06-17 01:11:17,355 [wrapper] Pilot exit status: 0
[2024-06-17 10:11:17] 2024-06-17 01:11:17,362 [wrapper] pandaids: 6231043087
[2024-06-17 10:11:17] 2024-06-17 01:11:17,393 [wrapper] cleanup supervisor_pilot 1130231 821510
[2024-06-17 10:11:17] 2024-06-17 01:11:17,396 [wrapper] Test setup, not cleaning
[2024-06-17 10:11:17] 2024-06-17 01:11:17,398 [wrapper] ==== wrapper stdout END ====
[2024-06-17 10:11:17] 2024-06-17 01:11:17,400 [wrapper] ==== wrapper stderr END ====
[2024-06-17 10:11:17] 2024-06-17 01:11:17,403 [wrapper] apfmon messages muted
[2024-06-17 10:11:17]  *** Error codes and diagnostics ***
[2024-06-17 10:11:17]     "exeErrorCode": 0,
[2024-06-17 10:11:17]     "exeErrorDiag": "",
[2024-06-17 10:11:17]     "pilotErrorCode": 0,
[2024-06-17 10:11:17]     "pilotErrorDiag": "",
[2024-06-17 10:11:17]  *** Listing of results directory ***
[2024-06-17 10:11:17] total 954440
[2024-06-17 10:11:17] -rw-r--r--. 1 boinc boinc    469766 Jun 15 11:01 pilot3.tar.gz
[2024-06-17 10:11:17] -rw-r--r--. 1 boinc boinc      5654 Jun 15 11:12 queuedata.json
[2024-06-17 10:11:17] -rwx------. 1 boinc boinc     32308 Jun 15 11:12 runpilot2-wrapper.sh
[2024-06-17 10:11:17] -rw-r--r--. 1 boinc boinc       100 Jun 17 02:39 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-17 10:11:17] -rwxr-xr-x. 1 boinc boinc      7986 Jun 17 02:39 run_atlas
[2024-06-17 10:11:17] -rw-r--r--. 1 boinc boinc       105 Jun 17 02:39 job.xml
[2024-06-17 10:11:17] -rw-r--r--. 2 boinc boinc 613310857 Jun 17 02:39 EVNT.38776190._000639.pool.root.1
[2024-06-17 10:11:17] -rw-r--r--. 2 boinc boinc     17537 Jun 17 02:39 start_atlas.sh
[2024-06-17 10:11:17] drwxrwx--x. 2 boinc boinc        68 Jun 17 02:39 shared
[2024-06-17 10:11:17] -rw-r--r--. 2 boinc boinc    482540 Jun 17 02:39 input.tar.gz
[2024-06-17 10:11:17] -rw-r--r--. 1 boinc boinc         0 Jun 17 02:39 boinc_lockfile
[2024-06-17 10:11:17] -rw-r--r--. 1 boinc boinc      2656 Jun 17 02:39 pandaJob.out
[2024-06-17 10:11:17] -rw-------. 1 boinc boinc       424 Jun 17 02:39 setup.sh.local
[2024-06-17 10:11:17] -rw-------. 1 boinc boinc   1020988 Jun 17 02:39 agis_schedconf.cvmfs.json
[2024-06-17 10:11:17] -rw-------. 1 boinc boinc   1316805 Jun 17 02:39 cric_ddmendpoints.json
[2024-06-17 10:11:17] drwx------. 4 boinc boinc      4096 Jun 17 02:39 pilot3
[2024-06-17 10:11:17] -rw-r--r--. 1 boinc boinc      9525 Jun 17 08:58 init_data.xml
[2024-06-17 10:11:17] -rw-------. 1 boinc boinc        95 Jun 17 10:10 pilot_heartbeat.json
[2024-06-17 10:11:17] -rw-------. 1 boinc boinc 353744866 Jun 17 10:10 HITS.38921001._057459.pool.root.1
[2024-06-17 10:11:17] -rw-r--r--. 1 boinc boinc       532 Jun 17 10:10 boinc_task_state.xml
[2024-06-17 10:11:17] -rw-------. 1 boinc boinc      1020 Jun 17 10:10 memory_monitor_summary.json
[2024-06-17 10:11:17] -rw-------. 1 boinc boinc         0 Jun 17 10:10 agis_ddmendpoints.agis.ALL.json
[2024-06-17 10:11:17] -rw-------. 1 boinc boinc    462976 Jun 17 10:10 log.38921001._057459.job.log.tgz.1
[2024-06-17 10:11:17] -rw-r--r--. 1 boinc boinc      8192 Jun 17 10:10 boinc_mmap_file
[2024-06-17 10:11:17] -rw-r--r--. 1 boinc boinc        28 Jun 17 10:10 wrapper_checkpoint.txt
[2024-06-17 10:11:17] -rw-------. 1 boinc boinc      7662 Jun 17 10:10 heartbeat.json
[2024-06-17 10:11:17] -rw-------. 1 boinc boinc      4407 Jun 17 10:11 pilotlog.txt
[2024-06-17 10:11:17] -rw-------. 1 boinc boinc   2917724 Jun 17 10:11 log.38921001._057459.job.log.1
[2024-06-17 10:11:17] -rw-------. 1 boinc boinc       357 Jun 17 10:11 output.list
[2024-06-17 10:11:17] -rw-r--r--. 1 boinc boinc       620 Jun 17 10:11 runtime_log
[2024-06-17 10:11:17] -rw-------. 1 boinc boinc   3399680 Jun 17 10:11 result.tar.gz
[2024-06-17 10:11:17] -rw-r--r--. 1 boinc boinc     10948 Jun 17 10:11 runtime_log.err
[2024-06-17 10:11:17] -rw-------. 1 boinc boinc       633 Jun 17 10:11 ayLKDmj5Xc5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmGBUKDmZnPAKn.diag
[2024-06-17 10:11:17] -rw-r--r--. 1 boinc boinc     21608 Jun 17 10:11 stderr.txt
[2024-06-17 10:11:17] HITS file was successfully produced:
[2024-06-17 10:11:17] -rw-------. 1 boinc boinc 353744866 Jun 17 10:10 shared/HITS.pool.root.1
[2024-06-17 10:11:17]  *** Contents of shared directory: ***
[2024-06-17 10:11:17] total 948212
[2024-06-17 10:11:17] -rw-r--r--. 2 boinc boinc 613310857 Jun 17 02:39 ATLAS.root_0
[2024-06-17 10:11:17] -rw-r--r--. 2 boinc boinc     17537 Jun 17 02:39 start_atlas.sh
[2024-06-17 10:11:17] -rw-r--r--. 2 boinc boinc    482540 Jun 17 02:39 input.tar.gz
[2024-06-17 10:11:17] -rw-------. 1 boinc boinc 353744866 Jun 17 10:10 HITS.pool.root.1
[2024-06-17 10:11:17] -rw-------. 1 boinc boinc   3399680 Jun 17 10:11 result.tar.gz
10:11:18 (817201): run_atlas exited; CPU time 98366.514498
10:11:18 (817201): called boinc_finish(0)

</stderr_txt>
]]>

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