Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:24:03 (54339): wrapper (7.7.26015): starting
03:24:03 (54339): wrapper: running run_atlas (--nthreads 8)
[2024-06-15 03:24:03] Arguments: --nthreads 8
[2024-06-15 03:24:03] Threads: 8
[2024-06-15 03:24:03] Checking for CVMFS
[2024-06-15 03:24:03] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-15 03:24:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-15 03:24:04] Running cvmfs_config stat atlas.cern.ch
[2024-06-15 03:24:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-15 03:24:04] 2.11.2.0 2604 6327 249604 133896 2 181 10022693 18432000 14315 130560 0 46597801 99.013 82517522 46354 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-06-15 03:24:04] CVMFS is ok
[2024-06-15 03:24:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-15 03:24:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-15 03:24:04] Further information can be found at the LHC@home message board.
[2024-06-15 03:24:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-15 03:24:04] Checking for apptainer binary...
[2024-06-15 03:24:04] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-15 03:24:04] Running /usr/bin/apptainer --version
[2024-06-15 03:24:04] apptainer version 1.3.1-1.el7
[2024-06-15 03:24:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-15 03:24:07] c-212-5.aglt2.org
[2024-06-15 03:24:07] apptainer works
[2024-06-15 03:24:07] Set ATHENA_PROC_NUMBER=8
[2024-06-15 03:24:07] Set ATHENA_CORE_NUMBER=8
[2024-06-15 03:24:07] Starting ATLAS job with PandaID=6230812371
[2024-06-15 03:24:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-15 11:55:05]  *** The last 200 lines of the pilot log: ***
[2024-06-15 11:55:05] 2024-06-15 15:54:31,284 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-15 11:55:05] 2024-06-15 15:54:33,789 | INFO     | monitor loop #2260: job 0:6230812371 is in state 'finished'
[2024-06-15 11:55:05] 2024-06-15 15:54:33,789 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-15 11:55:05] 2024-06-15 15:54:36,294 | INFO     | monitor loop #2261: job 0:6230812371 is in state 'finished'
[2024-06-15 11:55:05] 2024-06-15 15:54:36,294 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-15 11:55:05] 2024-06-15 15:54:37,270 | INFO     | 30601s have passed since pilot start
[2024-06-15 11:55:05] 2024-06-15 15:54:38,799 | INFO     | monitor loop #2262: job 0:6230812371 is in state 'finished'
[2024-06-15 11:55:05] 2024-06-15 15:54:38,800 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-15 11:55:05] 2024-06-15 15:54:41,305 | INFO     | monitor loop #2263: job 0:6230812371 is in state 'finished'
[2024-06-15 11:55:05] 2024-06-15 15:54:41,305 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-15 11:55:05] 2024-06-15 15:54:43,813 | INFO     | monitor loop #2264: job 0:6230812371 is in state 'finished'
[2024-06-15 11:55:05] 2024-06-15 15:54:43,813 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-15 11:55:05] 2024-06-15 15:54:46,322 | INFO     | monitor loop #2265: job 0:6230812371 is in state 'finished'
[2024-06-15 11:55:05] 2024-06-15 15:54:46,322 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-15 11:55:05] 2024-06-15 15:54:47,772 | INFO     | CPU arch script returned: x86-64-v3
[2024-06-15 11:55:05] 2024-06-15 15:54:47,772 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6230812371/memory_monitor_summary.json (trf name=prmon)
[2024-06-15 11:55:05] 2024-06-15 15:54:47,773 | INFO     | extracted standard info from prmon json
[2024-06-15 11:55:05] 2024-06-15 15:54:47,773 | INFO     | extracted standard memory fields from prmon json
[2024-06-15 11:55:05] 2024-06-15 15:54:47,773 | WARNING  | GPU info not found in prmon json
[2024-06-15 11:55:05] 2024-06-15 15:54:47,774 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-15 11:55:05] 2024-06-15 15:54:47,774 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-15 11:55:05] 2024-06-15 15:54:47,782 | INFO     | fitting pss+swap vs Time
[2024-06-15 11:55:05] 2024-06-15 15:54:47,782 | INFO     | model: linear, x: [1718436363.0, 1718436424.0, 1718436485.0, 1718436546.0, 1718436607.0, 1718436668.0, 1718436729.0, 1718436790.0, 1718436851.0, 1718436912.0, 1718
[2024-06-15 11:55:05] 2024-06-15 15:54:47,782 | INFO     | sum of square deviations: 38760265902.92765
[2024-06-15 11:55:05] 2024-06-15 15:54:47,787 | INFO     | sum of deviations: 855522738382.5531
[2024-06-15 11:55:05] 2024-06-15 15:54:47,787 | INFO     | mean x: 1718451582.512
[2024-06-15 11:55:05] 2024-06-15 15:54:47,787 | INFO     | mean y: 2411970.158
[2024-06-15 11:55:05] 2024-06-15 15:54:47,787 | INFO     | -- intersect: -37927523993.91527
[2024-06-15 11:55:05] 2024-06-15 15:54:47,787 | INFO     | intersect: -37927523993.91527
[2024-06-15 11:55:05] 2024-06-15 15:54:47,787 | INFO     | chi2: 14.747274662412988
[2024-06-15 11:55:05] 2024-06-15 15:54:47,788 | INFO     | model: linear, x: [1718436363.0, 1718436424.0, 1718436485.0, 1718436546.0, 1718436607.0, 1718436668.0, 1718436729.0, 1718436790.0, 1718436851.0, 1718436912.0, 1718
[2024-06-15 11:55:05] 2024-06-15 15:54:47,788 | INFO     | sum of square deviations: 37609046147.927895
[2024-06-15 11:55:05] 2024-06-15 15:54:47,792 | INFO     | sum of deviations: 879620534936.309
[2024-06-15 11:55:05] 2024-06-15 15:54:47,792 | INFO     | mean x: 1718451430.0121212
[2024-06-15 11:55:05] 2024-06-15 15:54:47,793 | INFO     | mean y: 2415125.4484848483
[2024-06-15 11:55:05] 2024-06-15 15:54:47,793 | INFO     | -- intersect: -40189648246.32116
[2024-06-15 11:55:05] 2024-06-15 15:54:47,793 | INFO     | intersect: -40189648246.32116
[2024-06-15 11:55:05] 2024-06-15 15:54:47,793 | INFO     | chi2: 13.964606188982541
[2024-06-15 11:55:05] 2024-06-15 15:54:47,793 | INFO     | current chi2=13.964606188982541 (change=5.307207544084514 %)
[2024-06-15 11:55:05] 2024-06-15 15:54:47,793 | INFO     | right removable region: 494
[2024-06-15 11:55:05] 2024-06-15 15:54:47,794 | INFO     | model: linear, x: [1718436668.0, 1718436729.0, 1718436790.0, 1718436851.0, 1718436912.0, 1718436973.0, 1718437034.0, 1718437095.0, 1718437156.0, 1718437217.0, 1718
[2024-06-15 11:55:05] 2024-06-15 15:54:47,794 | INFO     | sum of square deviations: 37609042487.927895
[2024-06-15 11:55:05] 2024-06-15 15:54:47,798 | INFO     | sum of deviations: 706550895181.5214
[2024-06-15 11:55:05] 2024-06-15 15:54:47,798 | INFO     | mean x: 1718451735.0121212
[2024-06-15 11:55:05] 2024-06-15 15:54:47,798 | INFO     | mean y: 2431687.913131313
[2024-06-15 11:55:05] 2024-06-15 15:54:47,798 | INFO     | -- intersect: -32281655632.01238
[2024-06-15 11:55:05] 2024-06-15 15:54:47,798 | INFO     | intersect: -32281655632.01238
[2024-06-15 11:55:05] 2024-06-15 15:54:47,799 | INFO     | chi2: 11.113715141375852
[2024-06-15 11:55:05] 2024-06-15 15:54:47,799 | INFO     | current chi2=11.113715141375852 (change=24.638854325390334 %)
[2024-06-15 11:55:05] 2024-06-15 15:54:47,799 | INFO     | left removable region: 10
[2024-06-15 11:55:05] 2024-06-15 15:54:47,799 | INFO     | model: linear, x: [1718436973.0, 1718437034.0, 1718437095.0, 1718437156.0, 1718437217.0, 1718437278.0, 1718437339.0, 1718437400.0, 1718437461.0, 1718437522.0, 1718
[2024-06-15 11:55:05] 2024-06-15 15:54:47,800 | INFO     | sum of square deviations: 35157071298.92586
[2024-06-15 11:55:05] 2024-06-15 15:54:47,803 | INFO     | sum of deviations: 619271804107.8593
[2024-06-15 11:55:05] 2024-06-15 15:54:47,804 | INFO     | mean x: 1718451704.5123968
[2024-06-15 11:55:05] 2024-06-15 15:54:47,804 | INFO     | mean y: 2450172.9400826446
[2024-06-15 11:55:05] 2024-06-15 15:54:47,804 | INFO     | -- intersect: -30267098683.313244
[2024-06-15 11:55:05] 2024-06-15 15:54:47,804 | INFO     | intersect: -30267098683.313244
[2024-06-15 11:55:05] 2024-06-15 15:54:47,804 | INFO     | chi2: 8.462040214062025
[2024-06-15 11:55:05] 2024-06-15 15:54:47,804 | INFO     | -- intersect: -30267098683.313244
[2024-06-15 11:55:05] 2024-06-15 15:54:47,804 | INFO     | current memory leak: 17.61 B/s (using 484 data points, chi2=8.46)
[2024-06-15 11:55:05] 2024-06-15 15:54:47,805 | INFO     | ..............................
[2024-06-15 11:55:05] 2024-06-15 15:54:47,805 | INFO     | . Timing measurements:
[2024-06-15 11:55:05] 2024-06-15 15:54:47,805 | INFO     | . get job = 0 s
[2024-06-15 11:55:05] 2024-06-15 15:54:47,805 | INFO     | . initial setup = 2 s
[2024-06-15 11:55:05] 2024-06-15 15:54:47,805 | INFO     | . payload setup = 23 s
[2024-06-15 11:55:05] 2024-06-15 15:54:47,805 | INFO     | . stage-in = 0 s
[2024-06-15 11:55:05] 2024-06-15 15:54:47,805 | INFO     | . payload execution = 30498 s
[2024-06-15 11:55:05] 2024-06-15 15:54:47,805 | INFO     | . stage-out = 2 s
[2024-06-15 11:55:05] 2024-06-15 15:54:47,805 | INFO     | . log creation = 0 s
[2024-06-15 11:55:05] 2024-06-15 15:54:47,805 | INFO     | ..............................
[2024-06-15 11:55:05] 2024-06-15 15:54:48,333 | INFO     | 
[2024-06-15 11:55:05] 2024-06-15 15:54:48,333 | INFO     | job summary report
[2024-06-15 11:55:05] 2024-06-15 15:54:48,333 | INFO     | --------------------------------------------------
[2024-06-15 11:55:05] 2024-06-15 15:54:48,333 | INFO     | PanDA job id: 6230812371
[2024-06-15 11:55:05] 2024-06-15 15:54:48,333 | INFO     | task id: 38921013
[2024-06-15 11:55:05] 2024-06-15 15:54:48,333 | INFO     | errors: (none)
[2024-06-15 11:55:05] 2024-06-15 15:54:48,333 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-15 11:55:05] 2024-06-15 15:54:48,333 | INFO     | pilot state: finished 
[2024-06-15 11:55:05] 2024-06-15 15:54:48,333 | INFO     | transexitcode: 0
[2024-06-15 11:55:05] 2024-06-15 15:54:48,334 | INFO     | exeerrorcode: 0
[2024-06-15 11:55:05] 2024-06-15 15:54:48,334 | INFO     | exeerrordiag: 
[2024-06-15 11:55:05] 2024-06-15 15:54:48,334 | INFO     | exitcode: 0
[2024-06-15 11:55:05] 2024-06-15 15:54:48,334 | INFO     | exitmsg: OK
[2024-06-15 11:55:05] 2024-06-15 15:54:48,334 | INFO     | cpuconsumptiontime: 142399 s
[2024-06-15 11:55:05] 2024-06-15 15:54:48,334 | INFO     | nevents: 400
[2024-06-15 11:55:05] 2024-06-15 15:54:48,336 | INFO     | neventsw: 0
[2024-06-15 11:55:05] 2024-06-15 15:54:48,336 | INFO     | pid: 82844
[2024-06-15 11:55:05] 2024-06-15 15:54:48,337 | INFO     | pgrp: 82844
[2024-06-15 11:55:05] 2024-06-15 15:54:48,337 | INFO     | corecount: 8
[2024-06-15 11:55:05] 2024-06-15 15:54:48,337 | INFO     | event service: False
[2024-06-15 11:55:05] 2024-06-15 15:54:48,337 | INFO     | sizes: {0: 2378912, 1: 2379111, 11: 2379111, 18: 2379345, 22: 2379373, 30525: 2417098, 30528: 2426058, 30529: 2426114, 30569: 2426284}
[2024-06-15 11:55:05] 2024-06-15 15:54:48,337 | INFO     | --------------------------------------------------
[2024-06-15 11:55:05] 2024-06-15 15:54:48,337 | INFO     | 
[2024-06-15 11:55:05] 2024-06-15 15:54:48,337 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2024-06-15 11:55:05] 2024-06-15 15:54:48,419 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-15 11:55:05] 2024-06-15 15:54:48,419 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-15 11:55:05] 2024-06-15 15:54:48,419 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-15 11:55:05] 2024-06-15 15:54:48,419 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-15 11:55:05] 2024-06-15 15:54:48,419 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-15 11:55:05] 2024-06-15 15:54:48,419 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-15 11:55:05] 2024-06-15 15:54:48,419 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-15 11:55:05] 2024-06-15 15:54:48,419 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-15 11:55:05] 2024-06-15 15:54:48,419 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-15 11:55:05] 2024-06-15 15:54:48,420 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-15 11:55:05] 2024-06-15 15:54:48,420 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-15 11:55:05] 2024-06-15 15:54:48,420 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-15 11:55:05] 2024-06-15 15:54:48,420 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-15 11:55:05] 2024-06-15 15:54:48,420 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-15 11:55:05] 2024-06-15 15:54:48,420 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-15 11:55:05] 2024-06-15 15:54:48,420 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-15 11:55:05] 2024-06-15 15:54:48,420 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-15 11:55:05] 2024-06-15 15:54:48,420 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-15 11:55:05] 2024-06-15 15:54:48,420 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-15 11:55:05] 2024-06-15 15:54:48,420 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-15 11:55:05] 2024-06-15 15:54:48,420 | INFO     | job 6230812371 has completed (purged errors)
[2024-06-15 11:55:05] 2024-06-15 15:54:48,420 | INFO     | overall cleanup function is called
[2024-06-15 11:55:05] 2024-06-15 15:54:49,429 | INFO     | --- collectZombieJob: --- 10, [82844]
[2024-06-15 11:55:05] 2024-06-15 15:54:49,429 | INFO     | zombie collector waiting for pid 82844
[2024-06-15 11:55:05] 2024-06-15 15:54:49,429 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-15 11:55:05] 2024-06-15 15:54:50,435 | INFO     | collected zombie processes
[2024-06-15 11:55:05] 2024-06-15 15:54:50,435 | INFO     | will now attempt to kill all subprocesses of pid=82844
[2024-06-15 11:55:05] 2024-06-15 15:54:50,581 | INFO     | process IDs to be killed: [82844] (in reverse order)
[2024-06-15 11:55:05] 2024-06-15 15:54:50,889 | WARNING  | found no corresponding commands to process id(s)
[2024-06-15 11:55:05] 2024-06-15 15:54:50,889 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-15 11:55:05] 2024-06-15 15:54:50,899 | INFO     | did not find any defunct processes belonging to 82844
[2024-06-15 11:55:05] 2024-06-15 15:54:50,909 | INFO     | did not find any defunct processes belonging to 82844
[2024-06-15 11:55:05] 2024-06-15 15:54:50,910 | INFO     | ready for new job
[2024-06-15 11:55:05] 2024-06-15 15:54:50,910 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-15 11:55:05] 2024-06-15 15:54:50,912 | INFO     | *************************************
[2024-06-15 11:55:05] 2024-06-15 15:54:50,912 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-15 11:55:05] 2024-06-15 15:54:50,912 | INFO     | *************************************
[2024-06-15 11:55:05] 2024-06-15 15:54:50,912 | INFO     | 
[2024-06-15 11:55:05] 2024-06-15 15:54:50,917 | INFO     | architecture information:
[2024-06-15 11:55:05] 2024-06-15 15:54:50,917 | INFO     | executing command: cat /etc/os-release
[2024-06-15 11:55:05] 2024-06-15 15:54:51,044 | INFO     | cat /etc/os-release:
[2024-06-15 11:55:05] NAME="CentOS Linux"
[2024-06-15 11:55:05] VERSION="7 (Core)"
[2024-06-15 11:55:05] ID="centos"
[2024-06-15 11:55:05] ID_LIKE="rhel fedora"
[2024-06-15 11:55:05] VERSION_ID="7"
[2024-06-15 11:55:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-15 11:55:05] ANSI_COLOR="0;31"
[2024-06-15 11:55:05] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-15 11:55:05] HOME_URL="https://www.centos.org/"
[2024-06-15 11:55:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-15 11:55:05] 
[2024-06-15 11:55:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-15 11:55:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-15 11:55:05] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-15 11:55:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-15 11:55:05] 
[2024-06-15 11:55:05] 2024-06-15 15:54:51,044 | INFO     | *************************************
[2024-06-15 11:55:05] 2024-06-15 15:54:51,547 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2024-06-15 11:55:05] 2024-06-15 15:54:51,566 | INFO     | sufficient remaining disk space (99669245952 B)
[2024-06-15 11:55:05] 2024-06-15 15:54:51,567 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-15 11:55:05] 2024-06-15 15:54:51,567 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-15 11:55:05] 2024-06-15 15:54:52,055 | INFO     | all job control threads have been joined
[2024-06-15 11:55:05] 2024-06-15 15:54:52,188 | INFO     | all data control threads have been joined
[2024-06-15 11:55:05] 2024-06-15 15:54:52,342 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-15 11:55:05] 2024-06-15 15:54:52,342 | INFO     | aborting loop
[2024-06-15 11:55:05] 2024-06-15 15:54:52,348 | INFO     | found 0 job(s) in 20 queues
[2024-06-15 11:55:05] 2024-06-15 15:54:52,348 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-15 11:55:05] 2024-06-15 15:54:52,348 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-15 11:55:05] 2024-06-15 15:54:52,566 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-15 11:55:05] 2024-06-15 15:54:52,571 | INFO     | [job] retrieve thread has finished
[2024-06-15 11:55:05] 2024-06-15 15:54:52,900 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-15 11:55:05] 2024-06-15 15:54:52,945 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-15 11:55:05] 2024-06-15 15:54:52,970 | INFO     | all payload control threads have been joined
[2024-06-15 11:55:05] 2024-06-15 15:54:53,060 | INFO     | [job] control thread has finished
[2024-06-15 11:55:05] 2024-06-15 15:54:53,194 | INFO     | [data] control thread has finished
[2024-06-15 11:55:05] 2024-06-15 15:54:53,276 | INFO     | [job] create_data_payload thread has finished
[2024-06-15 11:55:05] 2024-06-15 15:54:53,348 | INFO     | [job] job monitor thread has finished
[2024-06-15 11:55:05] 2024-06-15 15:54:53,360 | INFO     | [data] copytool_in thread has finished
[2024-06-15 11:55:05] 2024-06-15 15:54:53,741 | INFO     | [job] validate thread has finished
[2024-06-15 11:55:05] 2024-06-15 15:54:53,863 | INFO     | [payload] execute_payloads thread has finished
[2024-06-15 11:55:05] 2024-06-15 15:54:53,866 | INFO     | [payload] failed_post thread has finished
[2024-06-15 11:55:05] 2024-06-15 15:54:53,906 | INFO     | [job] queue monitor thread has finished
[2024-06-15 11:55:05] 2024-06-15 15:54:53,976 | INFO     | [payload] control thread has finished
[2024-06-15 11:55:05] 2024-06-15 15:54:54,021 | INFO     | [payload] validate_pre thread has finished
[2024-06-15 11:55:05] 2024-06-15 15:54:54,137 | INFO     | [payload] validate_post thread has finished
[2024-06-15 11:55:05] 2024-06-15 15:54:54,171 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-15 11:55:05] 2024-06-15 15:54:54,573 | INFO     | [data] copytool_out thread has finished
[2024-06-15 11:55:05] 2024-06-15 15:54:58,182 | INFO     | [data] queue_monitor thread has finished
[2024-06-15 11:55:05] 2024-06-15 15:54:58,284 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140644701796160)>', '<ExcThread(monitor, started 140644123137792)>']
[2024-06-15 11:55:05] 2024-06-15 15:54:58,383 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-15 11:55:05] 2024-06-15 15:54:58,383 | INFO     | [monitor] control thread has ended
[2024-06-15 11:55:05] 2024-06-15 15:55:03,310 | INFO     | all workflow threads have been joined
[2024-06-15 11:55:05] 2024-06-15 15:55:03,310 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-15 11:55:05] 2024-06-15 15:55:03,311 | INFO     | traces error code: 0
[2024-06-15 11:55:05] 2024-06-15 15:55:03,311 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-15 11:55:05] 2024-06-15 15:55:03,558 [wrapper] ==== pilot stdout END ====
[2024-06-15 11:55:05] 2024-06-15 15:55:03,598 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-15 11:55:05] 2024-06-15 15:55:03,634 [wrapper] pilotpid: 67726
[2024-06-15 11:55:05] 2024-06-15 15:55:03,688 [wrapper] Pilot exit status: 0
[2024-06-15 11:55:05] 2024-06-15 15:55:03,866 [wrapper] pandaids: 6230812371
[2024-06-15 11:55:05] 2024-06-15 15:55:04,292 [wrapper] cleanup supervisor_pilot 79107 67727
[2024-06-15 11:55:05] 2024-06-15 15:55:04,323 [wrapper] Test setup, not cleaning
[2024-06-15 11:55:05] 2024-06-15 15:55:04,364 [wrapper] ==== wrapper stdout END ====
[2024-06-15 11:55:05] 2024-06-15 15:55:04,375 [wrapper] ==== wrapper stderr END ====
[2024-06-15 11:55:05] 2024-06-15 15:55:04,419 [wrapper] apfmon messages muted
[2024-06-15 11:55:05]  *** Error codes and diagnostics ***
[2024-06-15 11:55:05]     "exeErrorCode": 0,
[2024-06-15 11:55:05]     "exeErrorDiag": "",
[2024-06-15 11:55:05]     "pilotErrorCode": 0,
[2024-06-15 11:55:05]     "pilotErrorDiag": "",
[2024-06-15 11:55:05]  *** Listing of results directory ***
[2024-06-15 11:55:05] total 873192
[2024-06-15 11:55:05] -rw-r--r-- 1 boincer umatlas    469766 Jun 14 21:10 pilot3.tar.gz
[2024-06-15 11:55:05] -rwx------ 1 boincer umatlas     32308 Jun 14 21:26 runpilot2-wrapper.sh
[2024-06-15 11:55:05] -rw-r--r-- 1 boincer umatlas      5654 Jun 14 21:26 queuedata.json
[2024-06-15 11:55:05] -rw-r--r-- 1 boincer umatlas       100 Jun 15 03:24 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-15 11:55:05] -rwxr-xr-x 1 boincer umatlas      7986 Jun 15 03:24 run_atlas
[2024-06-15 11:55:05] -rw-r--r-- 1 boincer umatlas       105 Jun 15 03:24 job.xml
[2024-06-15 11:55:05] -rw-r--r-- 2 boincer umatlas 542025955 Jun 15 03:24 EVNT.38776210._000989.pool.root.1
[2024-06-15 11:55:05] -rw-r--r-- 2 boincer umatlas     17537 Jun 15 03:24 start_atlas.sh
[2024-06-15 11:55:05] drwxrwx--x 2 boincer umatlas      4096 Jun 15 03:24 shared
[2024-06-15 11:55:05] -rw-r--r-- 2 boincer umatlas    482520 Jun 15 03:24 input.tar.gz
[2024-06-15 11:55:05] -rw-r--r-- 1 boincer umatlas         0 Jun 15 03:24 boinc_lockfile
[2024-06-15 11:55:05] -rw-r--r-- 1 boincer umatlas      2648 Jun 15 03:24 pandaJob.out
[2024-06-15 11:55:05] -rw------- 1 boincer umatlas       467 Jun 15 03:24 setup.sh.local
[2024-06-15 11:55:05] -rw------- 1 boincer umatlas   1020845 Jun 15 03:24 agis_schedconf.cvmfs.json
[2024-06-15 11:55:05] -rw------- 1 boincer umatlas   1316805 Jun 15 03:24 cric_ddmendpoints.json
[2024-06-15 11:55:05] drwx------ 4 boincer umatlas      4096 Jun 15 03:24 pilot3
[2024-06-15 11:55:05] -rw-r--r-- 1 boincer umatlas      6388 Jun 15 11:46 init_data.xml
[2024-06-15 11:55:05] -rw------- 1 boincer umatlas 341400618 Jun 15 11:53 HITS.38921013._037148.pool.root.1
[2024-06-15 11:55:05] -rw-r--r-- 1 boincer umatlas       532 Jun 15 11:53 boinc_task_state.xml
[2024-06-15 11:55:05] -rw------- 1 boincer umatlas      1074 Jun 15 11:53 memory_monitor_summary.json
[2024-06-15 11:55:05] -rw------- 1 boincer umatlas         0 Jun 15 11:54 agis_ddmendpoints.agis.ALL.json
[2024-06-15 11:55:05] -rw------- 1 boincer umatlas    576806 Jun 15 11:54 log.38921013._037148.job.log.tgz.1
[2024-06-15 11:55:05] -rw------- 1 boincer umatlas        95 Jun 15 11:54 pilot_heartbeat.json
[2024-06-15 11:55:05] -rw------- 1 boincer umatlas      7744 Jun 15 11:54 heartbeat.json
[2024-06-15 11:55:05] -rw-r--r-- 1 boincer umatlas        29 Jun 15 11:54 wrapper_checkpoint.txt
[2024-06-15 11:55:05] -rw-r--r-- 1 boincer umatlas      8192 Jun 15 11:54 boinc_mmap_file
[2024-06-15 11:55:05] -rw------- 1 boincer umatlas      4211 Jun 15 11:55 pilotlog.txt
[2024-06-15 11:55:05] -rw------- 1 boincer umatlas   3022596 Jun 15 11:55 log.38921013._037148.job.log.1
[2024-06-15 11:55:05] -rw------- 1 boincer umatlas       357 Jun 15 11:55 output.list
[2024-06-15 11:55:05] -rw-r--r-- 1 boincer umatlas       620 Jun 15 11:55 runtime_log
[2024-06-15 11:55:05] -rw------- 1 boincer umatlas   3614720 Jun 15 11:55 result.tar.gz
[2024-06-15 11:55:05] -rw-r--r-- 1 boincer umatlas     11400 Jun 15 11:55 runtime_log.err
[2024-06-15 11:55:05] -rw------- 1 boincer umatlas       652 Jun 15 11:55 DkqMDmYMXc5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmAAUKDmK46KAn.diag
[2024-06-15 11:55:05] -rw-r--r-- 1 boincer umatlas     21848 Jun 15 11:55 stderr.txt
[2024-06-15 11:55:05] HITS file was successfully produced:
[2024-06-15 11:55:05] -rw------- 1 boincer umatlas 341400618 Jun 15 11:53 shared/HITS.pool.root.1
[2024-06-15 11:55:05]  *** Contents of shared directory: ***
[2024-06-15 11:55:05] total 866756
[2024-06-15 11:55:05] -rw-r--r-- 2 boincer umatlas 542025955 Jun 15 03:24 ATLAS.root_0
[2024-06-15 11:55:05] -rw-r--r-- 2 boincer umatlas     17537 Jun 15 03:24 start_atlas.sh
[2024-06-15 11:55:05] -rw-r--r-- 2 boincer umatlas    482520 Jun 15 03:24 input.tar.gz
[2024-06-15 11:55:05] -rw------- 1 boincer umatlas 341400618 Jun 15 11:53 HITS.pool.root.1
[2024-06-15 11:55:05] -rw------- 1 boincer umatlas   3614720 Jun 15 11:55 result.tar.gz
11:55:06 (54339): run_atlas exited; CPU time 140076.410008
11:55:06 (54339): called boinc_finish(0)

</stderr_txt>
]]>

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