Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:28:03 (51429): wrapper (7.7.26015): starting
00:28:03 (51429): wrapper: running run_atlas (--nthreads 8)
[2024-06-15 00:28:03] Arguments: --nthreads 8
[2024-06-15 00:28:03] Threads: 8
[2024-06-15 00:28:03] Checking for CVMFS
[2024-06-15 00:28:03] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-15 00:28:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-15 00:28:03] Running cvmfs_config stat atlas.cern.ch
[2024-06-15 00:28:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-15 00:28:03] 2.11.2.0 92756 5398 158072 133892 2 330 16274330 18432001 14801 130560 0 33395874 99.214 50145692 54153 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-06-15 00:28:03] CVMFS is ok
[2024-06-15 00:28:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-15 00:28:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-15 00:28:03] Further information can be found at the LHC@home message board.
[2024-06-15 00:28:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-15 00:28:03] Checking for apptainer binary...
[2024-06-15 00:28:03] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-15 00:28:03] Running /usr/bin/apptainer --version
[2024-06-15 00:28:03] apptainer version 1.3.1-1.el7
[2024-06-15 00:28:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-15 00:28:05] c-212-11.aglt2.org
[2024-06-15 00:28:05] apptainer works
[2024-06-15 00:28:05] Set ATHENA_PROC_NUMBER=8
[2024-06-15 00:28:05] Set ATHENA_CORE_NUMBER=8
[2024-06-15 00:28:06] Starting ATLAS job with PandaID=6230811121
[2024-06-15 00:28:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-15 14:44:45]  *** The last 200 lines of the pilot log: ***
[2024-06-15 14:44:45] 2024-06-15 18:44:26,705 | INFO     | preparing for final server update for job 6230811121 in state='finished'
[2024-06-15 14:44:45] 2024-06-15 18:44:26,706 | INFO     | this job has now completed (state=finished)
[2024-06-15 14:44:45] 2024-06-15 18:44:26,706 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-06-15 14:44:45] 2024-06-15 18:44:26,706 | INFO     | job 6230811121 has finished - writing final server update
[2024-06-15 14:44:45] 2024-06-15 18:44:26,706 | INFO     | total number of processed events: 400 (read)
[2024-06-15 14:44:45] 2024-06-15 18:44:26,710 | INFO     | executing command: lscpu
[2024-06-15 14:44:45] 2024-06-15 18:44:26,744 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-06-15 14:44:45] 2024-06-15 18:44:26,745 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-06-15 14:44:45] 2024-06-15 18:44:26,809 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-06-15 14:44:45] 2024-06-15 18:44:27,567 | INFO     | monitor loop #3542: job 0:6230811121 is in state 'finished'
[2024-06-15 14:44:45] 2024-06-15 18:44:27,567 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-15 14:44:45] 2024-06-15 18:44:30,070 | INFO     | monitor loop #3543: job 0:6230811121 is in state 'finished'
[2024-06-15 14:44:45] 2024-06-15 18:44:30,070 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-15 14:44:45] 2024-06-15 18:44:30,550 | INFO     | CPU arch script returned: x86-64-v3
[2024-06-15 14:44:45] 2024-06-15 18:44:30,551 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6230811121/memory_monitor_summary.json (trf name=prmon)
[2024-06-15 14:44:45] 2024-06-15 18:44:30,551 | INFO     | extracted standard info from prmon json
[2024-06-15 14:44:45] 2024-06-15 18:44:30,552 | INFO     | extracted standard memory fields from prmon json
[2024-06-15 14:44:45] 2024-06-15 18:44:30,552 | WARNING  | GPU info not found in prmon json
[2024-06-15 14:44:45] 2024-06-15 18:44:30,552 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-15 14:44:45] 2024-06-15 18:44:30,552 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-15 14:44:45] 2024-06-15 18:44:30,565 | INFO     | fitting pss+swap vs Time
[2024-06-15 14:44:45] 2024-06-15 18:44:30,566 | INFO     | model: linear, x: [1718425818.0, 1718425879.0, 1718425940.0, 1718426001.0, 1718426062.0, 1718426123.0, 1718426184.0, 1718426245.0, 1718426306.0, 1718426367.0, 1718
[2024-06-15 14:44:45] 2024-06-15 18:44:30,566 | INFO     | sum of square deviations: 183787248021.99515
[2024-06-15 14:44:45] 2024-06-15 18:44:30,577 | INFO     | sum of deviations: 1792727847677.0942
[2024-06-15 14:44:45] 2024-06-15 18:44:30,577 | INFO     | mean x: 1718451407.5690477
[2024-06-15 14:44:45] 2024-06-15 18:44:30,577 | INFO     | mean y: 2464709.619047619
[2024-06-15 14:44:45] 2024-06-15 18:44:30,577 | INFO     | -- intersect: -16759937069.530725
[2024-06-15 14:44:45] 2024-06-15 18:44:30,577 | INFO     | intersect: -16759937069.530725
[2024-06-15 14:44:45] 2024-06-15 18:44:30,578 | INFO     | chi2: 16.0046160043003
[2024-06-15 14:44:45] 2024-06-15 18:44:30,578 | INFO     | model: linear, x: [1718425818.0, 1718425879.0, 1718425940.0, 1718426001.0, 1718426062.0, 1718426123.0, 1718426184.0, 1718426245.0, 1718426306.0, 1718426367.0, 1718
[2024-06-15 14:44:45] 2024-06-15 18:44:30,578 | INFO     | sum of square deviations: 180524841751.97125
[2024-06-15 14:44:45] 2024-06-15 18:44:30,589 | INFO     | sum of deviations: 1779408295885.9456
[2024-06-15 14:44:45] 2024-06-15 18:44:30,590 | INFO     | mean x: 1718451255.069461
[2024-06-15 14:44:45] 2024-06-15 18:44:30,590 | INFO     | mean y: 2464087.052694611
[2024-06-15 14:44:45] 2024-06-15 18:44:30,590 | INFO     | -- intersect: -16936071294.950068
[2024-06-15 14:44:45] 2024-06-15 18:44:30,590 | INFO     | intersect: -16936071294.950068
[2024-06-15 14:44:45] 2024-06-15 18:44:30,591 | INFO     | chi2: 16.00346232660261
[2024-06-15 14:44:45] 2024-06-15 18:44:30,591 | INFO     | current chi2=16.00346232660261 (change=0.007208405983501175 %)
[2024-06-15 14:44:45] 2024-06-15 18:44:30,591 | INFO     | right removable region: 834
[2024-06-15 14:44:45] 2024-06-15 18:44:30,591 | INFO     | model: linear, x: [1718426123.0, 1718426184.0, 1718426245.0, 1718426306.0, 1718426367.0, 1718426428.0, 1718426489.0, 1718426550.0, 1718426611.0, 1718426672.0, 1718
[2024-06-15 14:44:45] 2024-06-15 18:44:30,592 | INFO     | sum of square deviations: 180524806371.97125
[2024-06-15 14:44:45] 2024-06-15 18:44:30,603 | INFO     | sum of deviations: 1539246274783.0627
[2024-06-15 14:44:45] 2024-06-15 18:44:30,603 | INFO     | mean x: 1718451560.069461
[2024-06-15 14:44:45] 2024-06-15 18:44:30,603 | INFO     | mean y: 2476552.2574850298
[2024-06-15 14:44:45] 2024-06-15 18:44:30,603 | INFO     | -- intersect: -14649915079.626015
[2024-06-15 14:44:45] 2024-06-15 18:44:30,603 | INFO     | intersect: -14649915079.626015
[2024-06-15 14:44:45] 2024-06-15 18:44:30,604 | INFO     | chi2: 12.433426787206098
[2024-06-15 14:44:45] 2024-06-15 18:44:30,604 | INFO     | current chi2=12.433426787206098 (change=22.31349515748865 %)
[2024-06-15 14:44:45] 2024-06-15 18:44:30,604 | INFO     | left removable region: 10
[2024-06-15 14:44:45] 2024-06-15 18:44:30,604 | INFO     | model: linear, x: [1718426428.0, 1718426489.0, 1718426550.0, 1718426611.0, 1718426672.0, 1718426733.0, 1718426794.0, 1718426855.0, 1718426916.0, 1718426977.0, 1718
[2024-06-15 14:44:45] 2024-06-15 18:44:30,605 | INFO     | sum of square deviations: 173483859289.91736
[2024-06-15 14:44:45] 2024-06-15 18:44:30,616 | INFO     | sum of deviations: 1318160125017.4617
[2024-06-15 14:44:45] 2024-06-15 18:44:30,616 | INFO     | mean x: 1718451529.5703883
[2024-06-15 14:44:45] 2024-06-15 18:44:30,616 | INFO     | mean y: 2485835.2075242717
[2024-06-15 14:44:45] 2024-06-15 18:44:30,616 | INFO     | -- intersect: -13054603696.50202
[2024-06-15 14:44:45] 2024-06-15 18:44:30,616 | INFO     | intersect: -13054603696.50202
[2024-06-15 14:44:45] 2024-06-15 18:44:30,617 | INFO     | chi2: 10.167888299589944
[2024-06-15 14:44:45] 2024-06-15 18:44:30,617 | INFO     | -- intersect: -13054603696.50202
[2024-06-15 14:44:45] 2024-06-15 18:44:30,617 | INFO     | current memory leak: 7.60 B/s (using 824 data points, chi2=10.17)
[2024-06-15 14:44:45] 2024-06-15 18:44:30,618 | INFO     | ..............................
[2024-06-15 14:44:45] 2024-06-15 18:44:30,618 | INFO     | . Timing measurements:
[2024-06-15 14:44:45] 2024-06-15 18:44:30,618 | INFO     | . get job = 0 s
[2024-06-15 14:44:45] 2024-06-15 18:44:30,618 | INFO     | . initial setup = 2 s
[2024-06-15 14:44:45] 2024-06-15 18:44:30,618 | INFO     | . payload setup = 15 s
[2024-06-15 14:44:45] 2024-06-15 18:44:30,618 | INFO     | . stage-in = 0 s
[2024-06-15 14:44:45] 2024-06-15 18:44:30,618 | INFO     | . payload execution = 51250 s
[2024-06-15 14:44:45] 2024-06-15 18:44:30,619 | INFO     | . stage-out = 1 s
[2024-06-15 14:44:45] 2024-06-15 18:44:30,619 | INFO     | . log creation = 0 s
[2024-06-15 14:44:45] 2024-06-15 18:44:30,619 | INFO     | ..............................
[2024-06-15 14:44:45] 2024-06-15 18:44:30,699 | INFO     | 
[2024-06-15 14:44:45] 2024-06-15 18:44:30,699 | INFO     | job summary report
[2024-06-15 14:44:45] 2024-06-15 18:44:30,699 | INFO     | --------------------------------------------------
[2024-06-15 14:44:45] 2024-06-15 18:44:30,699 | INFO     | PanDA job id: 6230811121
[2024-06-15 14:44:45] 2024-06-15 18:44:30,699 | INFO     | task id: 38921013
[2024-06-15 14:44:45] 2024-06-15 18:44:30,699 | INFO     | errors: (none)
[2024-06-15 14:44:45] 2024-06-15 18:44:30,699 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-15 14:44:45] 2024-06-15 18:44:30,699 | INFO     | pilot state: finished 
[2024-06-15 14:44:45] 2024-06-15 18:44:30,699 | INFO     | transexitcode: 0
[2024-06-15 14:44:45] 2024-06-15 18:44:30,700 | INFO     | exeerrorcode: 0
[2024-06-15 14:44:45] 2024-06-15 18:44:30,700 | INFO     | exeerrordiag: 
[2024-06-15 14:44:45] 2024-06-15 18:44:30,700 | INFO     | exitcode: 0
[2024-06-15 14:44:45] 2024-06-15 18:44:30,700 | INFO     | exitmsg: OK
[2024-06-15 14:44:45] 2024-06-15 18:44:30,700 | INFO     | cpuconsumptiontime: 145843 s
[2024-06-15 14:44:45] 2024-06-15 18:44:30,700 | INFO     | nevents: 400
[2024-06-15 14:44:45] 2024-06-15 18:44:30,700 | INFO     | neventsw: 0
[2024-06-15 14:44:45] 2024-06-15 18:44:30,700 | INFO     | pid: 80103
[2024-06-15 14:44:45] 2024-06-15 18:44:30,700 | INFO     | pgrp: 80103
[2024-06-15 14:44:45] 2024-06-15 18:44:30,700 | INFO     | corecount: 8
[2024-06-15 14:44:45] 2024-06-15 18:44:30,700 | INFO     | event service: False
[2024-06-15 14:44:45] 2024-06-15 18:44:30,700 | INFO     | sizes: {0: 2379082, 11: 2379082, 19: 2379316, 21: 2379344, 51270: 2426458, 51272: 2435418, 51275: 2435602, 51281: 2435772}
[2024-06-15 14:44:45] 2024-06-15 18:44:30,700 | INFO     | --------------------------------------------------
[2024-06-15 14:44:45] 2024-06-15 18:44:30,700 | INFO     | 
[2024-06-15 14:44:45] 2024-06-15 18:44:30,700 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2024-06-15 14:44:45] 2024-06-15 18:44:30,720 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-15 14:44:45] 2024-06-15 18:44:30,720 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-15 14:44:45] 2024-06-15 18:44:30,720 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-15 14:44:45] 2024-06-15 18:44:30,720 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-15 14:44:45] 2024-06-15 18:44:30,720 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-15 14:44:45] 2024-06-15 18:44:30,720 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-15 14:44:45] 2024-06-15 18:44:30,720 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-15 14:44:45] 2024-06-15 18:44:30,720 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-15 14:44:45] 2024-06-15 18:44:30,720 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-15 14:44:45] 2024-06-15 18:44:30,720 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-15 14:44:45] 2024-06-15 18:44:30,720 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-15 14:44:45] 2024-06-15 18:44:30,721 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-15 14:44:45] 2024-06-15 18:44:30,721 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-15 14:44:45] 2024-06-15 18:44:30,721 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-15 14:44:45] 2024-06-15 18:44:30,721 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-15 14:44:45] 2024-06-15 18:44:30,721 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-15 14:44:45] 2024-06-15 18:44:30,721 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-15 14:44:45] 2024-06-15 18:44:30,721 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-15 14:44:45] 2024-06-15 18:44:30,721 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-15 14:44:45] 2024-06-15 18:44:30,721 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-15 14:44:45] 2024-06-15 18:44:30,721 | INFO     | job 6230811121 has completed (purged errors)
[2024-06-15 14:44:45] 2024-06-15 18:44:30,721 | INFO     | overall cleanup function is called
[2024-06-15 14:44:45] 2024-06-15 18:44:31,729 | INFO     | --- collectZombieJob: --- 10, [80103]
[2024-06-15 14:44:45] 2024-06-15 18:44:31,729 | INFO     | zombie collector waiting for pid 80103
[2024-06-15 14:44:45] 2024-06-15 18:44:31,729 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-15 14:44:45] 2024-06-15 18:44:32,734 | INFO     | collected zombie processes
[2024-06-15 14:44:45] 2024-06-15 18:44:32,734 | INFO     | will now attempt to kill all subprocesses of pid=80103
[2024-06-15 14:44:45] 2024-06-15 18:44:32,900 | INFO     | process IDs to be killed: [80103] (in reverse order)
[2024-06-15 14:44:45] 2024-06-15 18:44:32,969 | WARNING  | found no corresponding commands to process id(s)
[2024-06-15 14:44:45] 2024-06-15 18:44:32,970 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-15 14:44:45] 2024-06-15 18:44:32,976 | INFO     | did not find any defunct processes belonging to 80103
[2024-06-15 14:44:45] 2024-06-15 18:44:32,982 | INFO     | did not find any defunct processes belonging to 80103
[2024-06-15 14:44:45] 2024-06-15 18:44:32,982 | INFO     | ready for new job
[2024-06-15 14:44:45] 2024-06-15 18:44:32,982 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-15 14:44:45] 2024-06-15 18:44:32,984 | INFO     | *************************************
[2024-06-15 14:44:45] 2024-06-15 18:44:32,984 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-15 14:44:45] 2024-06-15 18:44:32,984 | INFO     | *************************************
[2024-06-15 14:44:45] 2024-06-15 18:44:32,984 | INFO     | 
[2024-06-15 14:44:45] 2024-06-15 18:44:32,987 | INFO     | architecture information:
[2024-06-15 14:44:45] 2024-06-15 18:44:32,987 | INFO     | executing command: cat /etc/os-release
[2024-06-15 14:44:45] 2024-06-15 18:44:33,003 | INFO     | cat /etc/os-release:
[2024-06-15 14:44:45] NAME="CentOS Linux"
[2024-06-15 14:44:45] VERSION="7 (Core)"
[2024-06-15 14:44:45] ID="centos"
[2024-06-15 14:44:45] ID_LIKE="rhel fedora"
[2024-06-15 14:44:45] VERSION_ID="7"
[2024-06-15 14:44:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-15 14:44:45] ANSI_COLOR="0;31"
[2024-06-15 14:44:45] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-15 14:44:45] HOME_URL="https://www.centos.org/"
[2024-06-15 14:44:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-15 14:44:45] 
[2024-06-15 14:44:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-15 14:44:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-15 14:44:45] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-15 14:44:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-15 14:44:45] 
[2024-06-15 14:44:45] 2024-06-15 18:44:33,004 | INFO     | *************************************
[2024-06-15 14:44:45] 2024-06-15 18:44:33,506 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2024-06-15 14:44:45] 2024-06-15 18:44:33,527 | INFO     | sufficient remaining disk space (97356087296 B)
[2024-06-15 14:44:45] 2024-06-15 18:44:33,528 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-15 14:44:45] 2024-06-15 18:44:33,528 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-15 14:44:45] 2024-06-15 18:44:33,528 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-15 14:44:45] 2024-06-15 18:44:33,528 | INFO     | found 0 job(s) in 20 queues
[2024-06-15 14:44:45] 2024-06-15 18:44:33,528 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-15 14:44:45] 2024-06-15 18:44:33,528 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-15 14:44:45] 2024-06-15 18:44:33,548 | INFO     | all data control threads have been joined
[2024-06-15 14:44:45] 2024-06-15 18:44:33,578 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-15 14:44:45] 2024-06-15 18:44:33,578 | INFO     | aborting loop
[2024-06-15 14:44:45] 2024-06-15 18:44:33,664 | INFO     | all payload control threads have been joined
[2024-06-15 14:44:45] 2024-06-15 18:44:34,186 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-15 14:44:45] 2024-06-15 18:44:34,533 | INFO     | [job] retrieve thread has finished
[2024-06-15 14:44:45] 2024-06-15 18:44:34,554 | INFO     | [data] control thread has finished
[2024-06-15 14:44:45] 2024-06-15 18:44:34,581 | INFO     | [job] job monitor thread has finished
[2024-06-15 14:44:45] 2024-06-15 18:44:34,598 | INFO     | [job] create_data_payload thread has finished
[2024-06-15 14:44:45] 2024-06-15 18:44:34,669 | INFO     | [payload] control thread has finished
[2024-06-15 14:44:45] 2024-06-15 18:44:34,856 | INFO     | [payload] execute_payloads thread has finished
[2024-06-15 14:44:45] 2024-06-15 18:44:34,945 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-15 14:44:45] 2024-06-15 18:44:35,075 | INFO     | all job control threads have been joined
[2024-06-15 14:44:45] 2024-06-15 18:44:35,085 | INFO     | [job] validate thread has finished
[2024-06-15 14:44:45] 2024-06-15 18:44:35,087 | INFO     | [data] copytool_in thread has finished
[2024-06-15 14:44:45] 2024-06-15 18:44:35,160 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-15 14:44:45] 2024-06-15 18:44:35,513 | INFO     | [payload] failed_post thread has finished
[2024-06-15 14:44:45] 2024-06-15 18:44:35,705 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-15 14:44:45] 2024-06-15 18:44:35,801 | INFO     | [payload] validate_pre thread has finished
[2024-06-15 14:44:45] 2024-06-15 18:44:35,943 | INFO     | [payload] validate_post thread has finished
[2024-06-15 14:44:45] 2024-06-15 18:44:36,081 | INFO     | [job] control thread has finished
[2024-06-15 14:44:45] 2024-06-15 18:44:36,192 | INFO     | [data] copytool_out thread has finished
[2024-06-15 14:44:45] 2024-06-15 18:44:36,710 | INFO     | [job] queue monitor thread has finished
[2024-06-15 14:44:45] 2024-06-15 18:44:39,163 | INFO     | [data] queue_monitor thread has finished
[2024-06-15 14:44:45] 2024-06-15 18:44:39,925 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140686384715584)>', '<ExcThread(monitor, started 140685814527744)>']
[2024-06-15 14:44:45] 2024-06-15 18:44:40,566 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-15 14:44:45] 2024-06-15 18:44:40,566 | INFO     | [monitor] control thread has ended
[2024-06-15 14:44:45] 2024-06-15 18:44:44,951 | INFO     | all workflow threads have been joined
[2024-06-15 14:44:45] 2024-06-15 18:44:44,951 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-15 14:44:45] 2024-06-15 18:44:44,951 | INFO     | traces error code: 0
[2024-06-15 14:44:45] 2024-06-15 18:44:44,952 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-15 14:44:45] 2024-06-15 18:44:45,067 [wrapper] ==== pilot stdout END ====
[2024-06-15 14:44:45] 2024-06-15 18:44:45,069 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-15 14:44:45] 2024-06-15 18:44:45,071 [wrapper] pilotpid: 63339
[2024-06-15 14:44:45] 2024-06-15 18:44:45,073 [wrapper] Pilot exit status: 0
[2024-06-15 14:44:45] 2024-06-15 18:44:45,079 [wrapper] pandaids: 6230811121
[2024-06-15 14:44:45] 2024-06-15 18:44:45,154 [wrapper] cleanup supervisor_pilot 13933 63340
[2024-06-15 14:44:45] 2024-06-15 18:44:45,157 [wrapper] Test setup, not cleaning
[2024-06-15 14:44:45] 2024-06-15 18:44:45,160 [wrapper] ==== wrapper stdout END ====
[2024-06-15 14:44:45] 2024-06-15 18:44:45,162 [wrapper] ==== wrapper stderr END ====
[2024-06-15 14:44:45] 2024-06-15 18:44:45,166 [wrapper] apfmon messages muted
[2024-06-15 14:44:45]  *** Error codes and diagnostics ***
[2024-06-15 14:44:45]     "exeErrorCode": 0,
[2024-06-15 14:44:45]     "exeErrorDiag": "",
[2024-06-15 14:44:45]     "pilotErrorCode": 0,
[2024-06-15 14:44:45]     "pilotErrorDiag": "",
[2024-06-15 14:44:45]  *** Listing of results directory ***
[2024-06-15 14:44:45] total 888184
[2024-06-15 14:44:45] -rw-r--r-- 1 boincer umatlas    469766 Jun 14 18:54 pilot3.tar.gz
[2024-06-15 14:44:45] -rwx------ 1 boincer umatlas     32308 Jun 14 19:09 runpilot2-wrapper.sh
[2024-06-15 14:44:45] -rw-r--r-- 1 boincer umatlas      5654 Jun 14 19:09 queuedata.json
[2024-06-15 14:44:45] -rw-r--r-- 1 boincer umatlas       100 Jun 15 00:28 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-15 14:44:45] -rwxr-xr-x 1 boincer umatlas      7986 Jun 15 00:28 run_atlas
[2024-06-15 14:44:45] -rw-r--r-- 1 boincer umatlas       105 Jun 15 00:28 job.xml
[2024-06-15 14:44:45] -rw-r--r-- 2 boincer umatlas     17537 Jun 15 00:28 start_atlas.sh
[2024-06-15 14:44:45] drwxrwx--x 2 boincer umatlas      4096 Jun 15 00:28 shared
[2024-06-15 14:44:45] -rw-r--r-- 2 boincer umatlas    482522 Jun 15 00:28 input.tar.gz
[2024-06-15 14:44:45] -rw-r--r-- 2 boincer umatlas 542961358 Jun 15 00:28 EVNT.38776210._000953.pool.root.1
[2024-06-15 14:44:45] -rw-r--r-- 1 boincer umatlas         0 Jun 15 00:28 boinc_lockfile
[2024-06-15 14:44:45] -rw-r--r-- 1 boincer umatlas      2647 Jun 15 00:28 pandaJob.out
[2024-06-15 14:44:45] -rw------- 1 boincer umatlas       467 Jun 15 00:28 setup.sh.local
[2024-06-15 14:44:45] -rw------- 1 boincer umatlas   1020861 Jun 15 00:29 agis_schedconf.cvmfs.json
[2024-06-15 14:44:45] -rw------- 1 boincer umatlas   1316805 Jun 15 00:29 cric_ddmendpoints.json
[2024-06-15 14:44:45] drwx------ 4 boincer umatlas      4096 Jun 15 00:29 pilot3
[2024-06-15 14:44:45] -rw-r--r-- 1 boincer umatlas      6387 Jun 15 14:39 init_data.xml
[2024-06-15 14:44:45] -rw------- 1 boincer umatlas 351028811 Jun 15 14:43 HITS.38921013._036253.pool.root.1
[2024-06-15 14:44:45] -rw-r--r-- 1 boincer umatlas       533 Jun 15 14:43 boinc_task_state.xml
[2024-06-15 14:44:45] -rw------- 1 boincer umatlas        95 Jun 15 14:44 pilot_heartbeat.json
[2024-06-15 14:44:45] -rw------- 1 boincer umatlas      1077 Jun 15 14:44 memory_monitor_summary.json
[2024-06-15 14:44:45] -rw------- 1 boincer umatlas         0 Jun 15 14:44 agis_ddmendpoints.agis.ALL.json
[2024-06-15 14:44:45] -rw------- 1 boincer umatlas    808552 Jun 15 14:44 log.38921013._036253.job.log.tgz.1
[2024-06-15 14:44:45] -rw------- 1 boincer umatlas      7747 Jun 15 14:44 heartbeat.json
[2024-06-15 14:44:45] -rw-r--r-- 1 boincer umatlas      8192 Jun 15 14:44 boinc_mmap_file
[2024-06-15 14:44:45] -rw-r--r-- 1 boincer umatlas        29 Jun 15 14:44 wrapper_checkpoint.txt
[2024-06-15 14:44:45] -rw------- 1 boincer umatlas      4334 Jun 15 14:44 pilotlog.txt
[2024-06-15 14:44:45] -rw------- 1 boincer umatlas   5179177 Jun 15 14:44 log.38921013._036253.job.log.1
[2024-06-15 14:44:45] -rw------- 1 boincer umatlas       357 Jun 15 14:44 output.list
[2024-06-15 14:44:45] -rw-r--r-- 1 boincer umatlas       620 Jun 15 14:44 runtime_log
[2024-06-15 14:44:45] -rw------- 1 boincer umatlas   6010880 Jun 15 14:44 result.tar.gz
[2024-06-15 14:44:45] -rw-r--r-- 1 boincer umatlas     11405 Jun 15 14:44 runtime_log.err
[2024-06-15 14:44:45] -rw------- 1 boincer umatlas       654 Jun 15 14:44 FavLDm8DVc5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmkTfKDmJLJmFo.diag
[2024-06-15 14:44:45] -rw-r--r-- 1 boincer umatlas     21862 Jun 15 14:44 stderr.txt
[2024-06-15 14:44:45] HITS file was successfully produced:
[2024-06-15 14:44:45] -rw------- 1 boincer umatlas 351028811 Jun 15 14:43 shared/HITS.pool.root.1
[2024-06-15 14:44:45]  *** Contents of shared directory: ***
[2024-06-15 14:44:45] total 879412
[2024-06-15 14:44:45] -rw-r--r-- 2 boincer umatlas     17537 Jun 15 00:28 start_atlas.sh
[2024-06-15 14:44:45] -rw-r--r-- 2 boincer umatlas    482522 Jun 15 00:28 input.tar.gz
[2024-06-15 14:44:45] -rw-r--r-- 2 boincer umatlas 542961358 Jun 15 00:28 ATLAS.root_0
[2024-06-15 14:44:45] -rw------- 1 boincer umatlas 351028811 Jun 15 14:43 HITS.pool.root.1
[2024-06-15 14:44:45] -rw------- 1 boincer umatlas   6010880 Jun 15 14:44 result.tar.gz
14:44:46 (51429): run_atlas exited; CPU time 142438.625380
14:44:46 (51429): called boinc_finish(0)

</stderr_txt>
]]>

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