Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:47:18 (21374): wrapper (7.7.26015): starting
23:47:18 (21374): wrapper: running run_atlas (--nthreads 8)
[2024-06-14 23:47:18] Arguments: --nthreads 8
[2024-06-14 23:47:18] Threads: 8
[2024-06-14 23:47:18] Checking for CVMFS
[2024-06-14 23:47:19] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-14 23:47:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-14 23:47:19] Running cvmfs_config stat atlas.cern.ch
[2024-06-14 23:47:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-14 23:47:19] 2.11.2.0 32788 12267 188128 133891 0 545 16539430 18432001 16492 130560 0 74915570 99.420 77039646 51350 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-06-14 23:47:19] CVMFS is ok
[2024-06-14 23:47:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-14 23:47:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-14 23:47:19] Further information can be found at the LHC@home message board.
[2024-06-14 23:47:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-14 23:47:19] Checking for apptainer binary...
[2024-06-14 23:47:19] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-14 23:47:19] Running /usr/bin/apptainer --version
[2024-06-14 23:47:19] apptainer version 1.3.2-1.el7
[2024-06-14 23:47:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-14 23:47:21] c-212-3.aglt2.org
[2024-06-14 23:47:21] apptainer works
[2024-06-14 23:47:21] Set ATHENA_PROC_NUMBER=8
[2024-06-14 23:47:21] Set ATHENA_CORE_NUMBER=8
[2024-06-14 23:47:21] Starting ATLAS job with PandaID=6230797860
[2024-06-14 23:47:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-15 08:56:19]  *** The last 200 lines of the pilot log: ***
[2024-06-15 08:56:19] 2024-06-15 12:55:43,415 | INFO     | monitor loop #2357: job 0:6230797860 is in state 'finished'
[2024-06-15 08:56:19] 2024-06-15 12:55:43,415 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-15 08:56:19] 2024-06-15 12:55:45,920 | INFO     | monitor loop #2358: job 0:6230797860 is in state 'finished'
[2024-06-15 08:56:19] 2024-06-15 12:55:45,920 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-15 08:56:19] 2024-06-15 12:55:48,435 | INFO     | monitor loop #2359: job 0:6230797860 is in state 'finished'
[2024-06-15 08:56:19] 2024-06-15 12:55:48,435 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-15 08:56:19] 2024-06-15 12:55:50,940 | INFO     | monitor loop #2360: job 0:6230797860 is in state 'finished'
[2024-06-15 08:56:19] 2024-06-15 12:55:50,940 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-15 08:56:19] 2024-06-15 12:55:53,445 | INFO     | monitor loop #2361: job 0:6230797860 is in state 'finished'
[2024-06-15 08:56:19] 2024-06-15 12:55:53,445 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-15 08:56:19] 2024-06-15 12:55:55,950 | INFO     | monitor loop #2362: job 0:6230797860 is in state 'finished'
[2024-06-15 08:56:19] 2024-06-15 12:55:55,950 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-15 08:56:19] 2024-06-15 12:55:56,276 | INFO     | CPU arch script returned: x86-64-v3
[2024-06-15 08:56:19] 2024-06-15 12:55:56,276 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6230797860/memory_monitor_summary.json (trf name=prmon)
[2024-06-15 08:56:19] 2024-06-15 12:55:56,277 | INFO     | extracted standard info from prmon json
[2024-06-15 08:56:19] 2024-06-15 12:55:56,277 | INFO     | extracted standard memory fields from prmon json
[2024-06-15 08:56:19] 2024-06-15 12:55:56,277 | WARNING  | GPU info not found in prmon json
[2024-06-15 08:56:19] 2024-06-15 12:55:56,277 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-15 08:56:19] 2024-06-15 12:55:56,277 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-15 08:56:19] 2024-06-15 12:55:56,284 | INFO     | fitting pss+swap vs Time
[2024-06-15 08:56:19] 2024-06-15 12:55:56,284 | INFO     | model: linear, x: [1718423365.0, 1718423426.0, 1718423487.0, 1718423548.0, 1718423609.0, 1718423670.0, 1718423731.0, 1718423792.0, 1718423853.0, 1718423914.0, 1718
[2024-06-15 08:56:19] 2024-06-15 12:55:56,285 | INFO     | sum of square deviations: 48017586930.77461
[2024-06-15 08:56:19] 2024-06-15 12:55:56,288 | INFO     | sum of deviations: 1018413083682.0221
[2024-06-15 08:56:19] 2024-06-15 12:55:56,289 | INFO     | mean x: 1718439713.0204842
[2024-06-15 08:56:19] 2024-06-15 12:55:56,289 | INFO     | mean y: 2440638.4525139667
[2024-06-15 08:56:19] 2024-06-15 12:55:56,289 | INFO     | -- intersect: -36444236488.03191
[2024-06-15 08:56:19] 2024-06-15 12:55:56,289 | INFO     | intersect: -36444236488.03191
[2024-06-15 08:56:19] 2024-06-15 12:55:56,289 | INFO     | chi2: 15.545306100334134
[2024-06-15 08:56:19] 2024-06-15 12:55:56,290 | INFO     | model: linear, x: [1718423365.0, 1718423426.0, 1718423487.0, 1718423548.0, 1718423609.0, 1718423670.0, 1718423731.0, 1718423792.0, 1718423853.0, 1718423914.0, 1718
[2024-06-15 08:56:19] 2024-06-15 12:55:56,290 | INFO     | sum of square deviations: 46688765370.77247
[2024-06-15 08:56:19] 2024-06-15 12:55:56,295 | INFO     | sum of deviations: 1007662820264.5562
[2024-06-15 08:56:19] 2024-06-15 12:55:56,295 | INFO     | mean x: 1718439560.5206766
[2024-06-15 08:56:19] 2024-06-15 12:55:56,295 | INFO     | mean y: 2439404.676691729
[2024-06-15 08:56:19] 2024-06-15 12:55:56,295 | INFO     | -- intersect: -37085875958.925735
[2024-06-15 08:56:19] 2024-06-15 12:55:56,295 | INFO     | intersect: -37085875958.925735
[2024-06-15 08:56:19] 2024-06-15 12:55:56,296 | INFO     | chi2: 15.537326202754217
[2024-06-15 08:56:19] 2024-06-15 12:55:56,296 | INFO     | current chi2=15.537326202754217 (change=0.051333164676283044 %)
[2024-06-15 08:56:19] 2024-06-15 12:55:56,296 | INFO     | right removable region: 531
[2024-06-15 08:56:19] 2024-06-15 12:55:56,297 | INFO     | model: linear, x: [1718423670.0, 1718423731.0, 1718423792.0, 1718423853.0, 1718423914.0, 1718423975.0, 1718424036.0, 1718424097.0, 1718424158.0, 1718424219.0, 1718
[2024-06-15 08:56:19] 2024-06-15 12:55:56,297 | INFO     | sum of square deviations: 46688758660.77247
[2024-06-15 08:56:19] 2024-06-15 12:55:56,302 | INFO     | sum of deviations: 859651327987.086
[2024-06-15 08:56:19] 2024-06-15 12:55:56,302 | INFO     | mean x: 1718439865.5206766
[2024-06-15 08:56:19] 2024-06-15 12:55:56,302 | INFO     | mean y: 2458842.537593985
[2024-06-15 08:56:19] 2024-06-15 12:55:56,302 | INFO     | -- intersect: -31638114923.712074
[2024-06-15 08:56:19] 2024-06-15 12:55:56,302 | INFO     | intersect: -31638114923.712074
[2024-06-15 08:56:19] 2024-06-15 12:55:56,302 | INFO     | chi2: 11.982408053245827
[2024-06-15 08:56:19] 2024-06-15 12:55:56,303 | INFO     | current chi2=11.982408053245827 (change=22.919446063604536 %)
[2024-06-15 08:56:19] 2024-06-15 12:55:56,303 | INFO     | left removable region: 10
[2024-06-15 08:56:19] 2024-06-15 12:55:56,303 | INFO     | model: linear, x: [1718423975.0, 1718424036.0, 1718424097.0, 1718424158.0, 1718424219.0, 1718424280.0, 1718424341.0, 1718424402.0, 1718424463.0, 1718424524.0, 1718
[2024-06-15 08:56:19] 2024-06-15 12:55:56,303 | INFO     | sum of square deviations: 43852118238.76766
[2024-06-15 08:56:19] 2024-06-15 12:55:56,308 | INFO     | sum of deviations: 724599069457.0916
[2024-06-15 08:56:19] 2024-06-15 12:55:56,308 | INFO     | mean x: 1718439835.0211132
[2024-06-15 08:56:19] 2024-06-15 12:55:56,308 | INFO     | mean y: 2472391.809980806
[2024-06-15 08:56:19] 2024-06-15 12:55:56,308 | INFO     | -- intersect: -28392504986.352097
[2024-06-15 08:56:19] 2024-06-15 12:55:56,308 | INFO     | intersect: -28392504986.352097
[2024-06-15 08:56:19] 2024-06-15 12:55:56,308 | INFO     | chi2: 9.944867847905144
[2024-06-15 08:56:19] 2024-06-15 12:55:56,308 | INFO     | -- intersect: -28392504986.352097
[2024-06-15 08:56:19] 2024-06-15 12:55:56,309 | INFO     | current memory leak: 16.52 B/s (using 521 data points, chi2=9.94)
[2024-06-15 08:56:19] 2024-06-15 12:55:56,309 | INFO     | ..............................
[2024-06-15 08:56:19] 2024-06-15 12:55:56,310 | INFO     | . Timing measurements:
[2024-06-15 08:56:19] 2024-06-15 12:55:56,310 | INFO     | . get job = 0 s
[2024-06-15 08:56:19] 2024-06-15 12:55:56,310 | INFO     | . initial setup = 2 s
[2024-06-15 08:56:19] 2024-06-15 12:55:56,310 | INFO     | . payload setup = 16 s
[2024-06-15 08:56:19] 2024-06-15 12:55:56,310 | INFO     | . stage-in = 0 s
[2024-06-15 08:56:19] 2024-06-15 12:55:56,310 | INFO     | . payload execution = 32768 s
[2024-06-15 08:56:19] 2024-06-15 12:55:56,310 | INFO     | . stage-out = 2 s
[2024-06-15 08:56:19] 2024-06-15 12:55:56,310 | INFO     | . log creation = 0 s
[2024-06-15 08:56:19] 2024-06-15 12:55:56,310 | INFO     | ..............................
[2024-06-15 08:56:19] 2024-06-15 12:55:56,379 | INFO     | 
[2024-06-15 08:56:19] 2024-06-15 12:55:56,380 | INFO     | job summary report
[2024-06-15 08:56:19] 2024-06-15 12:55:56,380 | INFO     | --------------------------------------------------
[2024-06-15 08:56:19] 2024-06-15 12:55:56,380 | INFO     | PanDA job id: 6230797860
[2024-06-15 08:56:19] 2024-06-15 12:55:56,380 | INFO     | task id: 38921001
[2024-06-15 08:56:19] 2024-06-15 12:55:56,380 | INFO     | errors: (none)
[2024-06-15 08:56:19] 2024-06-15 12:55:56,380 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-15 08:56:19] 2024-06-15 12:55:56,380 | INFO     | pilot state: finished 
[2024-06-15 08:56:19] 2024-06-15 12:55:56,380 | INFO     | transexitcode: 0
[2024-06-15 08:56:19] 2024-06-15 12:55:56,380 | INFO     | exeerrorcode: 0
[2024-06-15 08:56:19] 2024-06-15 12:55:56,380 | INFO     | exeerrordiag: 
[2024-06-15 08:56:19] 2024-06-15 12:55:56,380 | INFO     | exitcode: 0
[2024-06-15 08:56:19] 2024-06-15 12:55:56,380 | INFO     | exitmsg: OK
[2024-06-15 08:56:19] 2024-06-15 12:55:56,380 | INFO     | cpuconsumptiontime: 114957 s
[2024-06-15 08:56:19] 2024-06-15 12:55:56,380 | INFO     | nevents: 400
[2024-06-15 08:56:19] 2024-06-15 12:55:56,380 | INFO     | neventsw: 0
[2024-06-15 08:56:19] 2024-06-15 12:55:56,380 | INFO     | pid: 47368
[2024-06-15 08:56:19] 2024-06-15 12:55:56,380 | INFO     | pgrp: 47368
[2024-06-15 08:56:19] 2024-06-15 12:55:56,381 | INFO     | corecount: 8
[2024-06-15 08:56:19] 2024-06-15 12:55:56,381 | INFO     | event service: False
[2024-06-15 08:56:19] 2024-06-15 12:55:56,381 | INFO     | sizes: {0: 2377675, 1: 2379211, 12: 2379211, 22: 2379445, 33: 2379473, 32788: 2417792, 32791: 2426752, 32794: 2426808, 32820: 2426978}
[2024-06-15 08:56:19] 2024-06-15 12:55:56,381 | INFO     | --------------------------------------------------
[2024-06-15 08:56:19] 2024-06-15 12:55:56,381 | INFO     | 
[2024-06-15 08:56:19] 2024-06-15 12:55:56,381 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2024-06-15 08:56:19] 2024-06-15 12:55:56,622 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-15 08:56:19] 2024-06-15 12:55:56,623 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-15 08:56:19] 2024-06-15 12:55:56,623 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-15 08:56:19] 2024-06-15 12:55:56,623 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-15 08:56:19] 2024-06-15 12:55:56,623 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-15 08:56:19] 2024-06-15 12:55:56,623 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-15 08:56:19] 2024-06-15 12:55:56,623 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-15 08:56:19] 2024-06-15 12:55:56,623 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-15 08:56:19] 2024-06-15 12:55:56,623 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-15 08:56:19] 2024-06-15 12:55:56,623 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-15 08:56:19] 2024-06-15 12:55:56,623 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-15 08:56:19] 2024-06-15 12:55:56,623 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-15 08:56:19] 2024-06-15 12:55:56,623 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-15 08:56:19] 2024-06-15 12:55:56,624 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-15 08:56:19] 2024-06-15 12:55:56,624 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-15 08:56:19] 2024-06-15 12:55:56,624 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-15 08:56:19] 2024-06-15 12:55:56,624 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-15 08:56:19] 2024-06-15 12:55:56,624 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-15 08:56:19] 2024-06-15 12:55:56,624 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-15 08:56:19] 2024-06-15 12:55:56,624 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-15 08:56:19] 2024-06-15 12:55:56,624 | INFO     | job 6230797860 has completed (purged errors)
[2024-06-15 08:56:19] 2024-06-15 12:55:56,624 | INFO     | overall cleanup function is called
[2024-06-15 08:56:19] 2024-06-15 12:55:57,632 | INFO     | --- collectZombieJob: --- 10, [47368]
[2024-06-15 08:56:19] 2024-06-15 12:55:57,632 | INFO     | zombie collector waiting for pid 47368
[2024-06-15 08:56:19] 2024-06-15 12:55:57,632 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-15 08:56:19] 2024-06-15 12:55:58,638 | INFO     | collected zombie processes
[2024-06-15 08:56:19] 2024-06-15 12:55:58,638 | INFO     | will now attempt to kill all subprocesses of pid=47368
[2024-06-15 08:56:19] 2024-06-15 12:55:59,048 | INFO     | process IDs to be killed: [47368] (in reverse order)
[2024-06-15 08:56:19] 2024-06-15 12:55:59,519 | WARNING  | found no corresponding commands to process id(s)
[2024-06-15 08:56:19] 2024-06-15 12:55:59,520 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-15 08:56:19] 2024-06-15 12:55:59,528 | INFO     | did not find any defunct processes belonging to 47368
[2024-06-15 08:56:19] 2024-06-15 12:55:59,534 | INFO     | did not find any defunct processes belonging to 47368
[2024-06-15 08:56:19] 2024-06-15 12:55:59,534 | INFO     | ready for new job
[2024-06-15 08:56:19] 2024-06-15 12:55:59,534 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-15 08:56:19] 2024-06-15 12:55:59,536 | INFO     | *************************************
[2024-06-15 08:56:19] 2024-06-15 12:55:59,536 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-15 08:56:19] 2024-06-15 12:55:59,536 | INFO     | *************************************
[2024-06-15 08:56:19] 2024-06-15 12:55:59,536 | INFO     | 
[2024-06-15 08:56:19] 2024-06-15 12:55:59,540 | INFO     | architecture information:
[2024-06-15 08:56:19] 2024-06-15 12:55:59,541 | INFO     | executing command: cat /etc/os-release
[2024-06-15 08:56:19] 2024-06-15 12:55:59,641 | INFO     | cat /etc/os-release:
[2024-06-15 08:56:19] NAME="CentOS Linux"
[2024-06-15 08:56:19] VERSION="7 (Core)"
[2024-06-15 08:56:19] ID="centos"
[2024-06-15 08:56:19] ID_LIKE="rhel fedora"
[2024-06-15 08:56:19] VERSION_ID="7"
[2024-06-15 08:56:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-15 08:56:19] ANSI_COLOR="0;31"
[2024-06-15 08:56:19] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-15 08:56:19] HOME_URL="https://www.centos.org/"
[2024-06-15 08:56:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-15 08:56:19] 
[2024-06-15 08:56:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-15 08:56:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-15 08:56:19] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-15 08:56:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-15 08:56:19] 
[2024-06-15 08:56:19] 2024-06-15 12:55:59,641 | INFO     | *************************************
[2024-06-15 08:56:19] 2024-06-15 12:56:00,144 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2024-06-15 08:56:19] 2024-06-15 12:56:00,174 | INFO     | sufficient remaining disk space (97439973376 B)
[2024-06-15 08:56:19] 2024-06-15 12:56:00,175 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-15 08:56:19] 2024-06-15 12:56:00,175 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-15 08:56:19] 2024-06-15 12:56:00,175 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-15 08:56:19] 2024-06-15 12:56:00,175 | INFO     | aborting loop
[2024-06-15 08:56:19] 2024-06-15 12:56:00,175 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-15 08:56:19] 2024-06-15 12:56:00,176 | INFO     | found 0 job(s) in 20 queues
[2024-06-15 08:56:19] 2024-06-15 12:56:00,176 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-15 08:56:19] 2024-06-15 12:56:00,176 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-15 08:56:19] 2024-06-15 12:56:00,301 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-15 08:56:19] 2024-06-15 12:56:00,467 | INFO     | all payload control threads have been joined
[2024-06-15 08:56:19] 2024-06-15 12:56:01,043 | INFO     | all data control threads have been joined
[2024-06-15 08:56:19] 2024-06-15 12:56:01,180 | INFO     | [job] retrieve thread has finished
[2024-06-15 08:56:19] 2024-06-15 12:56:01,181 | INFO     | [job] job monitor thread has finished
[2024-06-15 08:56:19] 2024-06-15 12:56:01,337 | INFO     | [job] validate thread has finished
[2024-06-15 08:56:19] 2024-06-15 12:56:01,350 | INFO     | all job control threads have been joined
[2024-06-15 08:56:19] 2024-06-15 12:56:01,391 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-15 08:56:19] 2024-06-15 12:56:01,473 | INFO     | [payload] control thread has finished
[2024-06-15 08:56:19] 2024-06-15 12:56:01,591 | INFO     | [payload] execute_payloads thread has finished
[2024-06-15 08:56:19] 2024-06-15 12:56:01,794 | INFO     | [job] create_data_payload thread has finished
[2024-06-15 08:56:19] 2024-06-15 12:56:02,050 | INFO     | [data] control thread has finished
[2024-06-15 08:56:19] 2024-06-15 12:56:02,077 | INFO     | [payload] failed_post thread has finished
[2024-06-15 08:56:19] 2024-06-15 12:56:02,228 | INFO     | [data] copytool_in thread has finished
[2024-06-15 08:56:19] 2024-06-15 12:56:02,302 | INFO     | [data] copytool_out thread has finished
[2024-06-15 08:56:19] 2024-06-15 12:56:02,356 | INFO     | [job] control thread has finished
[2024-06-15 08:56:19] 2024-06-15 12:56:02,397 | INFO     | [job] queue monitor thread has finished
[2024-06-15 08:56:19] 2024-06-15 12:56:02,443 | INFO     | [payload] validate_pre thread has finished
[2024-06-15 08:56:19] 2024-06-15 12:56:02,467 | INFO     | [payload] validate_post thread has finished
[2024-06-15 08:56:19] 2024-06-15 12:56:02,994 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-15 08:56:19] 2024-06-15 12:56:07,000 | INFO     | [data] queue_monitor thread has finished
[2024-06-15 08:56:19] 2024-06-15 12:56:10,532 | INFO     | job.realtimelogging is not enabled
[2024-06-15 08:56:19] 2024-06-15 12:56:11,538 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-15 08:56:19] 2024-06-15 12:56:12,871 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139665394337600)>', '<ExcThread(monitor, started 139664820270848)>']
[2024-06-15 08:56:19] 2024-06-15 12:56:13,252 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-15 08:56:19] 2024-06-15 12:56:13,252 | INFO     | [monitor] control thread has ended
[2024-06-15 08:56:19] 2024-06-15 12:56:17,897 | INFO     | all workflow threads have been joined
[2024-06-15 08:56:19] 2024-06-15 12:56:17,898 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-15 08:56:19] 2024-06-15 12:56:17,898 | INFO     | traces error code: 0
[2024-06-15 08:56:19] 2024-06-15 12:56:17,898 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-15 08:56:19] 2024-06-15 12:56:18,124 [wrapper] ==== pilot stdout END ====
[2024-06-15 08:56:19] 2024-06-15 12:56:18,133 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-15 08:56:19] 2024-06-15 12:56:18,157 [wrapper] pilotpid: 30277
[2024-06-15 08:56:19] 2024-06-15 12:56:18,198 [wrapper] Pilot exit status: 0
[2024-06-15 08:56:19] 2024-06-15 12:56:18,386 [wrapper] pandaids: 6230797860
[2024-06-15 08:56:19] 2024-06-15 12:56:18,714 [wrapper] cleanup supervisor_pilot 41692 30278
[2024-06-15 08:56:19] 2024-06-15 12:56:18,752 [wrapper] Test setup, not cleaning
[2024-06-15 08:56:19] 2024-06-15 12:56:18,792 [wrapper] ==== wrapper stdout END ====
[2024-06-15 08:56:19] 2024-06-15 12:56:18,842 [wrapper] ==== wrapper stderr END ====
[2024-06-15 08:56:19] 2024-06-15 12:56:18,910 [wrapper] apfmon messages muted
[2024-06-15 08:56:19]  *** Error codes and diagnostics ***
[2024-06-15 08:56:19]     "exeErrorCode": 0,
[2024-06-15 08:56:19]     "exeErrorDiag": "",
[2024-06-15 08:56:19]     "pilotErrorCode": 0,
[2024-06-15 08:56:19]     "pilotErrorDiag": "",
[2024-06-15 08:56:19]  *** Listing of results directory ***
[2024-06-15 08:56:19] total 958944
[2024-06-15 08:56:19] -rw-r--r-- 1 boincer umatlas    469766 Jun 14 18:54 pilot3.tar.gz
[2024-06-15 08:56:19] -rwx------ 1 boincer umatlas     32308 Jun 14 19:05 runpilot2-wrapper.sh
[2024-06-15 08:56:19] -rw-r--r-- 1 boincer umatlas      5654 Jun 14 19:05 queuedata.json
[2024-06-15 08:56:19] -rw-r--r-- 1 boincer umatlas       100 Jun 14 23:47 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-15 08:56:19] -rwxr-xr-x 1 boincer umatlas      7986 Jun 14 23:47 run_atlas
[2024-06-15 08:56:19] -rw-r--r-- 1 boincer umatlas       105 Jun 14 23:47 job.xml
[2024-06-15 08:56:19] -rw-r--r-- 2 boincer umatlas 615650574 Jun 14 23:47 EVNT.38776190._000582.pool.root.1
[2024-06-15 08:56:19] -rw-r--r-- 2 boincer umatlas     17537 Jun 14 23:47 start_atlas.sh
[2024-06-15 08:56:19] drwxrwx--x 2 boincer umatlas      4096 Jun 14 23:47 shared
[2024-06-15 08:56:19] -rw-r--r-- 2 boincer umatlas    482532 Jun 14 23:47 input.tar.gz
[2024-06-15 08:56:19] -rw-r--r-- 1 boincer umatlas         0 Jun 14 23:47 boinc_lockfile
[2024-06-15 08:56:19] -rw-r--r-- 1 boincer umatlas      2656 Jun 14 23:47 pandaJob.out
[2024-06-15 08:56:19] -rw------- 1 boincer umatlas       467 Jun 14 23:47 setup.sh.local
[2024-06-15 08:56:19] -rw------- 1 boincer umatlas   1020845 Jun 14 23:48 agis_schedconf.cvmfs.json
[2024-06-15 08:56:19] -rw------- 1 boincer umatlas   1316805 Jun 14 23:48 cric_ddmendpoints.json
[2024-06-15 08:56:19] drwx------ 4 boincer umatlas      4096 Jun 14 23:48 pilot3
[2024-06-15 08:56:19] -rw-r--r-- 1 boincer umatlas      6388 Jun 15 08:45 init_data.xml
[2024-06-15 08:56:19] -rw------- 1 boincer umatlas 355438766 Jun 15 08:54 HITS.38921001._057415.pool.root.1
[2024-06-15 08:56:19] -rw-r--r-- 1 boincer umatlas       532 Jun 15 08:54 boinc_task_state.xml
[2024-06-15 08:56:19] -rw------- 1 boincer umatlas      1075 Jun 15 08:55 memory_monitor_summary.json
[2024-06-15 08:56:19] -rw------- 1 boincer umatlas        95 Jun 15 08:55 pilot_heartbeat.json
[2024-06-15 08:56:19] -rw------- 1 boincer umatlas         0 Jun 15 08:55 agis_ddmendpoints.agis.ALL.json
[2024-06-15 08:56:19] -rw------- 1 boincer umatlas    575776 Jun 15 08:55 log.38921001._057415.job.log.tgz.1
[2024-06-15 08:56:19] -rw------- 1 boincer umatlas      7746 Jun 15 08:55 heartbeat.json
[2024-06-15 08:56:19] -rw-r--r-- 1 boincer umatlas      8192 Jun 15 08:56 boinc_mmap_file
[2024-06-15 08:56:19] -rw------- 1 boincer umatlas      4406 Jun 15 08:56 pilotlog.txt
[2024-06-15 08:56:19] -rw-r--r-- 1 boincer umatlas        29 Jun 15 08:56 wrapper_checkpoint.txt
[2024-06-15 08:56:19] -rw------- 1 boincer umatlas   3096522 Jun 15 08:56 log.38921001._057415.job.log.1
[2024-06-15 08:56:19] -rw------- 1 boincer umatlas       357 Jun 15 08:56 output.list
[2024-06-15 08:56:19] -rw-r--r-- 1 boincer umatlas       620 Jun 15 08:56 runtime_log
[2024-06-15 08:56:19] -rw------- 1 boincer umatlas   3686400 Jun 15 08:56 result.tar.gz
[2024-06-15 08:56:19] -rw-r--r-- 1 boincer umatlas     11400 Jun 15 08:56 runtime_log.err
[2024-06-15 08:56:19] -rw------- 1 boincer umatlas       652 Jun 15 08:56 9GVLDmdAVc5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmX6TKDmfeuYxn.diag
[2024-06-15 08:56:19] -rw-r--r-- 1 boincer umatlas     21870 Jun 15 08:56 stderr.txt
[2024-06-15 08:56:19] HITS file was successfully produced:
[2024-06-15 08:56:19] -rw------- 1 boincer umatlas 355438766 Jun 15 08:54 shared/HITS.pool.root.1
[2024-06-15 08:56:19]  *** Contents of shared directory: ***
[2024-06-15 08:56:19] total 952436
[2024-06-15 08:56:19] -rw-r--r-- 2 boincer umatlas 615650574 Jun 14 23:47 ATLAS.root_0
[2024-06-15 08:56:19] -rw-r--r-- 2 boincer umatlas     17537 Jun 14 23:47 start_atlas.sh
[2024-06-15 08:56:19] -rw-r--r-- 2 boincer umatlas    482532 Jun 14 23:47 input.tar.gz
[2024-06-15 08:56:19] -rw------- 1 boincer umatlas 355438766 Jun 15 08:54 HITS.pool.root.1
[2024-06-15 08:56:19] -rw------- 1 boincer umatlas   3686400 Jun 15 08:56 result.tar.gz
08:56:20 (21374): run_atlas exited; CPU time 112536.693462
08:56:20 (21374): called boinc_finish(0)

</stderr_txt>
]]>

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