Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
10:41:56 (165168): wrapper (7.7.26015): starting
10:41:56 (165168): wrapper: running run_atlas (--nthreads 6)
[2024-06-16 10:41:56] Arguments: --nthreads 6
[2024-06-16 10:41:56] Threads: 6
[2024-06-16 10:41:56] Checking for CVMFS
[2024-06-16 10:41:56] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-16 10:41:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-16 10:41:56] Running cvmfs_config stat atlas.cern.ch
[2024-06-16 10:41:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-16 10:41:56] 2.11.2.0 2816 21445 71508 133932 1 189 3475158 6144001 915 130560 0 36727548 99.995 3065110 3010 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.42:3128 1
[2024-06-16 10:41:56] CVMFS is ok
[2024-06-16 10:41:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-16 10:41:56] Checking for apptainer binary...
[2024-06-16 10:41:56] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-16 10:41:56] Running /usr/bin/apptainer --version
[2024-06-16 10:41:56] apptainer version 1.3.0
[2024-06-16 10:41:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-16 10:41:56] Ryzen8
[2024-06-16 10:41:56] apptainer works
[2024-06-16 10:41:56] Set ATHENA_PROC_NUMBER=6
[2024-06-16 10:41:56] Set ATHENA_CORE_NUMBER=6
[2024-06-16 10:41:56] Starting ATLAS job with PandaID=6230426183
[2024-06-16 10:41:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-16 14:23:29]  *** The last 200 lines of the pilot log: ***
[2024-06-16 14:23:29] 2024-06-16 12:23:07,457 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-16 14:23:29] 2024-06-16 12:23:09,353 | INFO     | CPU arch script returned: x86-64-v4
[2024-06-16 14:23:29] 2024-06-16 12:23:09,353 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6230426183/memory_monitor_summary.json (trf name=prmon)
[2024-06-16 14:23:29] 2024-06-16 12:23:09,353 | INFO     | extracted standard info from prmon json
[2024-06-16 14:23:29] 2024-06-16 12:23:09,353 | INFO     | extracted standard memory fields from prmon json
[2024-06-16 14:23:29] 2024-06-16 12:23:09,353 | WARNING  | GPU info not found in prmon json
[2024-06-16 14:23:29] 2024-06-16 12:23:09,354 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-16 14:23:29] 2024-06-16 12:23:09,354 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-16 14:23:29] 2024-06-16 12:23:09,356 | INFO     | fitting pss+swap vs Time
[2024-06-16 14:23:29] 2024-06-16 12:23:09,356 | INFO     | model: linear, x: [1718527339.0, 1718527400.0, 1718527461.0, 1718527522.0, 1718527583.0, 1718527644.0, 1718527705.0, 1718527766.0, 1718527827.0, 1718527888.0, 1718
[2024-06-16 14:23:29] 2024-06-16 12:23:09,356 | INFO     | sum of square deviations: 3168461268.0
[2024-06-16 14:23:29] 2024-06-16 12:23:09,357 | INFO     | sum of deviations: 29321791893.00001
[2024-06-16 14:23:29] 2024-06-16 12:23:09,357 | INFO     | mean x: 1718533927.0
[2024-06-16 14:23:29] 2024-06-16 12:23:09,357 | INFO     | mean y: 2501561.9078341015
[2024-06-16 14:23:29] 2024-06-16 12:23:09,357 | INFO     | -- intersect: -15901273143.333117
[2024-06-16 14:23:29] 2024-06-16 12:23:09,357 | INFO     | intersect: -15901273143.333117
[2024-06-16 14:23:29] 2024-06-16 12:23:09,357 | INFO     | chi2: 1.9727997328434181
[2024-06-16 14:23:29] 2024-06-16 12:23:09,357 | INFO     | model: linear, x: [1718527339.0, 1718527400.0, 1718527461.0, 1718527522.0, 1718527583.0, 1718527644.0, 1718527705.0, 1718527766.0, 1718527827.0, 1718527888.0, 1718
[2024-06-16 14:23:29] 2024-06-16 12:23:09,357 | INFO     | sum of square deviations: 2954447953.0
[2024-06-16 14:23:29] 2024-06-16 12:23:09,358 | INFO     | sum of deviations: 28607189153.999996
[2024-06-16 14:23:29] 2024-06-16 12:23:09,358 | INFO     | mean x: 1718533774.5
[2024-06-16 14:23:29] 2024-06-16 12:23:09,358 | INFO     | mean y: 2501054.462264151
[2024-06-16 14:23:29] 2024-06-16 12:23:09,358 | INFO     | -- intersect: -16637636641.901167
[2024-06-16 14:23:29] 2024-06-16 12:23:09,358 | INFO     | intersect: -16637636641.901167
[2024-06-16 14:23:29] 2024-06-16 12:23:09,358 | INFO     | chi2: 1.974244901769277
[2024-06-16 14:23:29] 2024-06-16 12:23:09,358 | INFO     | current chi2=1.974244901769277 (change=-0.0732547202739042 %)
[2024-06-16 14:23:29] 2024-06-16 12:23:09,358 | INFO     | right removable region: 211
[2024-06-16 14:23:29] 2024-06-16 12:23:09,358 | INFO     | model: linear, x: [1718527644.0, 1718527705.0, 1718527766.0, 1718527827.0, 1718527888.0, 1718527949.0, 1718528010.0, 1718528071.0, 1718528132.0, 1718528193.0, 1718
[2024-06-16 14:23:29] 2024-06-16 12:23:09,358 | INFO     | sum of square deviations: 2954447953.0
[2024-06-16 14:23:29] 2024-06-16 12:23:09,359 | INFO     | sum of deviations: -14671330759.000004
[2024-06-16 14:23:29] 2024-06-16 12:23:09,359 | INFO     | mean x: 1718534079.5
[2024-06-16 14:23:29] 2024-06-16 12:23:09,359 | INFO     | mean y: 2532724.283018868
[2024-06-16 14:23:29] 2024-06-16 12:23:09,359 | INFO     | -- intersect: 8536506685.596565
[2024-06-16 14:23:29] 2024-06-16 12:23:09,359 | INFO     | intersect: 8536506685.596565
[2024-06-16 14:23:29] 2024-06-16 12:23:09,359 | INFO     | chi2: 0.096074275813012
[2024-06-16 14:23:29] 2024-06-16 12:23:09,359 | INFO     | current chi2=0.096074275813012 (change=95.13005429727329 %)
[2024-06-16 14:23:29] 2024-06-16 12:23:09,359 | INFO     | model: linear, x: [1718527949.0, 1718528010.0, 1718528071.0, 1718528132.0, 1718528193.0, 1718528254.0, 1718528315.0, 1718528376.0, 1718528437.0, 1718528498.0, 1718
[2024-06-16 14:23:29] 2024-06-16 12:23:09,359 | INFO     | sum of square deviations: 2750295288.0
[2024-06-16 14:23:29] 2024-06-16 12:23:09,360 | INFO     | sum of deviations: -15515454492.999996
[2024-06-16 14:23:29] 2024-06-16 12:23:09,360 | INFO     | mean x: 1718534232.0
[2024-06-16 14:23:29] 2024-06-16 12:23:09,360 | INFO     | mean y: 2533321.8647342995
[2024-06-16 14:23:29] 2024-06-16 12:23:09,360 | INFO     | -- intersect: 9697434006.746647
[2024-06-16 14:23:29] 2024-06-16 12:23:09,360 | INFO     | intersect: 9697434006.746647
[2024-06-16 14:23:29] 2024-06-16 12:23:09,360 | INFO     | chi2: 0.08446516135319697
[2024-06-16 14:23:29] 2024-06-16 12:23:09,360 | INFO     | current chi2=0.08446516135319697 (change=12.083478497834 %)
[2024-06-16 14:23:29] 2024-06-16 12:23:09,360 | INFO     | left removable region: 20
[2024-06-16 14:23:29] 2024-06-16 12:23:09,360 | INFO     | model: linear, x: [1718528559.0, 1718528620.0, 1718528681.0, 1718528742.0, 1718528803.0, 1718528864.0, 1718528925.0, 1718528986.0, 1718529047.0, 1718529108.0, 1718
[2024-06-16 14:23:29] 2024-06-16 12:23:09,360 | INFO     | sum of square deviations: 2160561440.0
[2024-06-16 14:23:29] 2024-06-16 12:23:09,361 | INFO     | sum of deviations: -6660742682.999999
[2024-06-16 14:23:29] 2024-06-16 12:23:09,361 | INFO     | mean x: 1718534354.0
[2024-06-16 14:23:29] 2024-06-16 12:23:09,361 | INFO     | mean y: 2526434.104712042
[2024-06-16 14:23:29] 2024-06-16 12:23:09,361 | INFO     | -- intersect: 5300554489.2058115
[2024-06-16 14:23:29] 2024-06-16 12:23:09,361 | INFO     | intersect: 5300554489.2058115
[2024-06-16 14:23:29] 2024-06-16 12:23:09,361 | INFO     | chi2: 0.06453267549170506
[2024-06-16 14:23:29] 2024-06-16 12:23:09,361 | INFO     | -- intersect: 5300554489.2058115
[2024-06-16 14:23:29] 2024-06-16 12:23:09,361 | INFO     | current memory leak: -3.08 B/s (using 191 data points, chi2=0.06)
[2024-06-16 14:23:29] 2024-06-16 12:23:09,361 | INFO     | ..............................
[2024-06-16 14:23:29] 2024-06-16 12:23:09,362 | INFO     | . Timing measurements:
[2024-06-16 14:23:29] 2024-06-16 12:23:09,362 | INFO     | . get job = 0 s
[2024-06-16 14:23:29] 2024-06-16 12:23:09,362 | INFO     | . initial setup = 1 s
[2024-06-16 14:23:29] 2024-06-16 12:23:09,362 | INFO     | . payload setup = 2 s
[2024-06-16 14:23:29] 2024-06-16 12:23:09,362 | INFO     | . stage-in = 0 s
[2024-06-16 14:23:29] 2024-06-16 12:23:09,362 | INFO     | . payload execution = 13205 s
[2024-06-16 14:23:29] 2024-06-16 12:23:09,362 | INFO     | . stage-out = 0 s
[2024-06-16 14:23:29] 2024-06-16 12:23:09,362 | INFO     | . log creation = 0 s
[2024-06-16 14:23:29] 2024-06-16 12:23:09,362 | INFO     | ..............................
[2024-06-16 14:23:29] 2024-06-16 12:23:09,402 | INFO     | 
[2024-06-16 14:23:29] 2024-06-16 12:23:09,403 | INFO     | job summary report
[2024-06-16 14:23:29] 2024-06-16 12:23:09,403 | INFO     | --------------------------------------------------
[2024-06-16 14:23:29] 2024-06-16 12:23:09,403 | INFO     | PanDA job id: 6230426183
[2024-06-16 14:23:29] 2024-06-16 12:23:09,403 | INFO     | task id: 38921013
[2024-06-16 14:23:29] 2024-06-16 12:23:09,403 | INFO     | errors: (none)
[2024-06-16 14:23:29] 2024-06-16 12:23:09,403 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-16 14:23:29] 2024-06-16 12:23:09,403 | INFO     | pilot state: finished 
[2024-06-16 14:23:29] 2024-06-16 12:23:09,403 | INFO     | transexitcode: 0
[2024-06-16 14:23:29] 2024-06-16 12:23:09,403 | INFO     | exeerrorcode: 0
[2024-06-16 14:23:29] 2024-06-16 12:23:09,403 | INFO     | exeerrordiag: 
[2024-06-16 14:23:29] 2024-06-16 12:23:09,403 | INFO     | exitcode: 0
[2024-06-16 14:23:29] 2024-06-16 12:23:09,403 | INFO     | exitmsg: OK
[2024-06-16 14:23:29] 2024-06-16 12:23:09,403 | INFO     | cpuconsumptiontime: 76152 s
[2024-06-16 14:23:29] 2024-06-16 12:23:09,403 | INFO     | nevents: 400
[2024-06-16 14:23:29] 2024-06-16 12:23:09,403 | INFO     | neventsw: 0
[2024-06-16 14:23:29] 2024-06-16 12:23:09,403 | INFO     | pid: 175832
[2024-06-16 14:23:29] 2024-06-16 12:23:09,403 | INFO     | pgrp: 175832
[2024-06-16 14:23:29] 2024-06-16 12:23:09,403 | INFO     | corecount: 6
[2024-06-16 14:23:29] 2024-06-16 12:23:09,403 | INFO     | event service: False
[2024-06-16 14:23:29] 2024-06-16 12:23:09,403 | INFO     | sizes: {0: 2377575, 1: 2379111, 3: 2379317, 11: 2379345, 13211: 2409476, 13212: 2418436, 13213: 2418620, 13255: 2418790}
[2024-06-16 14:23:29] 2024-06-16 12:23:09,403 | INFO     | --------------------------------------------------
[2024-06-16 14:23:29] 2024-06-16 12:23:09,403 | INFO     | 
[2024-06-16 14:23:29] 2024-06-16 12:23:09,403 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2024-06-16 14:23:29] 2024-06-16 12:23:09,414 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-16 14:23:29] 2024-06-16 12:23:09,414 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-16 14:23:29] 2024-06-16 12:23:09,414 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-16 14:23:29] 2024-06-16 12:23:09,414 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-16 14:23:29] 2024-06-16 12:23:09,414 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-16 14:23:29] 2024-06-16 12:23:09,414 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-16 14:23:29] 2024-06-16 12:23:09,414 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-16 14:23:29] 2024-06-16 12:23:09,414 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-16 14:23:29] 2024-06-16 12:23:09,414 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-16 14:23:29] 2024-06-16 12:23:09,414 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-16 14:23:29] 2024-06-16 12:23:09,414 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-16 14:23:29] 2024-06-16 12:23:09,414 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-16 14:23:29] 2024-06-16 12:23:09,414 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-16 14:23:29] 2024-06-16 12:23:09,414 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-16 14:23:29] 2024-06-16 12:23:09,414 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-16 14:23:29] 2024-06-16 12:23:09,414 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-16 14:23:29] 2024-06-16 12:23:09,414 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-16 14:23:29] 2024-06-16 12:23:09,414 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-16 14:23:29] 2024-06-16 12:23:09,414 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-16 14:23:29] 2024-06-16 12:23:09,414 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-16 14:23:29] 2024-06-16 12:23:09,414 | INFO     | job 6230426183 has completed (purged errors)
[2024-06-16 14:23:29] 2024-06-16 12:23:09,415 | INFO     | overall cleanup function is called
[2024-06-16 14:23:29] 2024-06-16 12:23:10,421 | INFO     | --- collectZombieJob: --- 10, [175832]
[2024-06-16 14:23:29] 2024-06-16 12:23:10,421 | INFO     | zombie collector waiting for pid 175832
[2024-06-16 14:23:29] 2024-06-16 12:23:10,421 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-16 14:23:29] 2024-06-16 12:23:11,426 | INFO     | collected zombie processes
[2024-06-16 14:23:29] 2024-06-16 12:23:11,427 | INFO     | will now attempt to kill all subprocesses of pid=175832
[2024-06-16 14:23:29] 2024-06-16 12:23:11,465 | INFO     | process IDs to be killed: [175832] (in reverse order)
[2024-06-16 14:23:29] 2024-06-16 12:23:11,491 | WARNING  | found no corresponding commands to process id(s)
[2024-06-16 14:23:29] 2024-06-16 12:23:11,491 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-16 14:23:29] 2024-06-16 12:23:11,493 | INFO     | did not find any defunct processes belonging to 175832
[2024-06-16 14:23:29] 2024-06-16 12:23:11,494 | INFO     | did not find any defunct processes belonging to 175832
[2024-06-16 14:23:29] 2024-06-16 12:23:11,495 | INFO     | ready for new job
[2024-06-16 14:23:29] 2024-06-16 12:23:11,495 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-16 14:23:29] 2024-06-16 12:23:11,496 | INFO     | *************************************
[2024-06-16 14:23:29] 2024-06-16 12:23:11,496 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-16 14:23:29] 2024-06-16 12:23:11,496 | INFO     | *************************************
[2024-06-16 14:23:29] 2024-06-16 12:23:11,496 | INFO     | 
[2024-06-16 14:23:29] 2024-06-16 12:23:11,496 | INFO     | architecture information:
[2024-06-16 14:23:29] 2024-06-16 12:23:11,496 | INFO     | executing command: cat /etc/os-release
[2024-06-16 14:23:29] 2024-06-16 12:23:11,505 | INFO     | cat /etc/os-release:
[2024-06-16 14:23:29] NAME="CentOS Linux"
[2024-06-16 14:23:29] VERSION="7 (Core)"
[2024-06-16 14:23:29] ID="centos"
[2024-06-16 14:23:29] ID_LIKE="rhel fedora"
[2024-06-16 14:23:29] VERSION_ID="7"
[2024-06-16 14:23:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-16 14:23:29] ANSI_COLOR="0;31"
[2024-06-16 14:23:29] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-16 14:23:29] HOME_URL="https://www.centos.org/"
[2024-06-16 14:23:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-16 14:23:29] 
[2024-06-16 14:23:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-16 14:23:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-16 14:23:29] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-16 14:23:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-16 14:23:29] 
[2024-06-16 14:23:29] 2024-06-16 12:23:11,505 | INFO     | *************************************
[2024-06-16 14:23:29] 2024-06-16 12:23:12,008 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2024-06-16 14:23:29] 2024-06-16 12:23:12,018 | INFO     | sufficient remaining disk space (99524542464 B)
[2024-06-16 14:23:29] 2024-06-16 12:23:12,018 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-16 14:23:29] 2024-06-16 12:23:12,018 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-16 14:23:29] 2024-06-16 12:23:12,018 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-16 14:23:29] 2024-06-16 12:23:12,018 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-16 14:23:29] 2024-06-16 12:23:12,018 | INFO     | found 0 job(s) in 20 queues
[2024-06-16 14:23:29] 2024-06-16 12:23:12,018 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-16 14:23:29] 2024-06-16 12:23:12,018 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-16 14:23:29] 2024-06-16 12:23:12,464 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-06-16 14:23:29] 2024-06-16 12:23:12,465 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-06-16 14:23:29] 2024-06-16 12:23:12,465 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-16 14:23:29] 2024-06-16 12:23:12,465 | INFO     | will abort loop
[2024-06-16 14:23:29] 2024-06-16 12:23:12,769 | INFO     | all data control threads have been joined
[2024-06-16 14:23:29] 2024-06-16 12:23:13,023 | INFO     | [job] retrieve thread has finished
[2024-06-16 14:23:29] 2024-06-16 12:23:13,227 | INFO     | [job] validate thread has finished
[2024-06-16 14:23:29] 2024-06-16 12:23:13,236 | INFO     | [payload] validate_pre thread has finished
[2024-06-16 14:23:29] 2024-06-16 12:23:13,325 | INFO     | [job] create_data_payload thread has finished
[2024-06-16 14:23:29] 2024-06-16 12:23:13,467 | INFO     | [job] job monitor thread has finished
[2024-06-16 14:23:29] 2024-06-16 12:23:13,484 | INFO     | all payload control threads have been joined
[2024-06-16 14:23:29] 2024-06-16 12:23:13,547 | INFO     | all job control threads have been joined
[2024-06-16 14:23:29] 2024-06-16 12:23:13,744 | INFO     | [data] copytool_in thread has finished
[2024-06-16 14:23:29] 2024-06-16 12:23:13,774 | INFO     | [data] control thread has finished
[2024-06-16 14:23:29] 2024-06-16 12:23:14,021 | INFO     | [data] copytool_out thread has finished
[2024-06-16 14:23:29] 2024-06-16 12:23:14,031 | INFO     | [payload] failed_post thread has finished
[2024-06-16 14:23:29] 2024-06-16 12:23:14,121 | INFO     | [payload] execute_payloads thread has finished
[2024-06-16 14:23:29] 2024-06-16 12:23:14,201 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-16 14:23:29] 2024-06-16 12:23:14,413 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-16 14:23:29] 2024-06-16 12:23:14,489 | INFO     | [payload] control thread has finished
[2024-06-16 14:23:29] 2024-06-16 12:23:14,553 | INFO     | [job] control thread has finished
[2024-06-16 14:23:29] 2024-06-16 12:23:14,592 | INFO     | [payload] validate_post thread has finished
[2024-06-16 14:23:29] 2024-06-16 12:23:15,418 | INFO     | [job] queue monitor thread has finished
[2024-06-16 14:23:29] 2024-06-16 12:23:18,204 | INFO     | [data] queue_monitor thread has finished
[2024-06-16 14:23:29] 2024-06-16 12:23:22,467 | INFO     | job.realtimelogging is not enabled
[2024-06-16 14:23:29] 2024-06-16 12:23:23,471 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-16 14:23:29] 2024-06-16 12:23:24,774 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140253499176768)>', '<ExcThread(monitor, started 140253004285696)>']
[2024-06-16 14:23:29] 2024-06-16 12:23:25,082 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-16 14:23:29] 2024-06-16 12:23:25,082 | INFO     | [monitor] control thread has ended
[2024-06-16 14:23:29] 2024-06-16 12:23:29,797 | INFO     | all workflow threads have been joined
[2024-06-16 14:23:29] 2024-06-16 12:23:29,797 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-16 14:23:29] 2024-06-16 12:23:29,798 | INFO     | traces error code: 0
[2024-06-16 14:23:29] 2024-06-16 12:23:29,798 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-16 14:23:29] 2024-06-16 12:23:29,853 [wrapper] ==== pilot stdout END ====
[2024-06-16 14:23:29] 2024-06-16 12:23:29,854 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-16 14:23:29] 2024-06-16 12:23:29,855 [wrapper] pilotpid: 169371
[2024-06-16 14:23:29] 2024-06-16 12:23:29,856 [wrapper] Pilot exit status: 0
[2024-06-16 14:23:29] 2024-06-16 12:23:29,861 [wrapper] pandaids: 6230426183
[2024-06-16 14:23:29] 2024-06-16 12:23:29,877 [wrapper] cleanup supervisor_pilot  236720 169372
[2024-06-16 14:23:29] 2024-06-16 12:23:29,878 [wrapper] Test setup, not cleaning
[2024-06-16 14:23:29] 2024-06-16 12:23:29,879 [wrapper] ==== wrapper stdout END ====
[2024-06-16 14:23:29] 2024-06-16 12:23:29,881 [wrapper] ==== wrapper stderr END ====
[2024-06-16 14:23:29] 2024-06-16 12:23:29,883 [wrapper] apfmon messages muted
[2024-06-16 14:23:29]  *** Error codes and diagnostics ***
[2024-06-16 14:23:29]     "exeErrorCode": 0,
[2024-06-16 14:23:29]     "exeErrorDiag": "",
[2024-06-16 14:23:29]     "pilotErrorCode": 0,
[2024-06-16 14:23:29]     "pilotErrorDiag": "",
[2024-06-16 14:23:29]  *** Listing of results directory ***
[2024-06-16 14:23:29] insgesamt 877556
[2024-06-16 14:23:29] -rw-r--r-- 1 boinc boinc    469766 14. Jun 16:52 pilot3.tar.gz
[2024-06-16 14:23:29] -rwx------ 1 boinc boinc     32308 14. Jun 17:07 runpilot2-wrapper.sh
[2024-06-16 14:23:29] -rw-r--r-- 1 boinc boinc      5654 14. Jun 17:07 queuedata.json
[2024-06-16 14:23:29] -rw-r--r-- 1 boinc boinc       100 16. Jun 10:41 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-16 14:23:29] -rwxr-xr-x 1 boinc boinc      7986 16. Jun 10:41 run_atlas
[2024-06-16 14:23:29] -rw-r--r-- 1 boinc boinc       105 16. Jun 10:41 job.xml
[2024-06-16 14:23:29] -rw-r--r-- 2 boinc boinc     17537 16. Jun 10:41 start_atlas.sh
[2024-06-16 14:23:29] drwxrwx--x 2 boinc boinc      4096 16. Jun 10:41 shared
[2024-06-16 14:23:29] -rw-r--r-- 2 boinc boinc    482525 16. Jun 10:41 input.tar.gz
[2024-06-16 14:23:29] -rw-r--r-- 1 boinc boinc      7136 16. Jun 10:41 init_data.xml
[2024-06-16 14:23:29] -rw-r--r-- 2 boinc boinc 541788745 16. Jun 10:41 EVNT.38776210._000919.pool.root.1
[2024-06-16 14:23:29] -rw-r--r-- 1 boinc boinc         0 16. Jun 10:41 boinc_lockfile
[2024-06-16 14:23:29] -rw-r--r-- 1 boinc boinc      2648 16. Jun 10:41 pandaJob.out
[2024-06-16 14:23:29] -rw------- 1 boinc boinc       462 16. Jun 10:41 setup.sh.local
[2024-06-16 14:23:29] -rw------- 1 boinc boinc   1020517 16. Jun 10:42 agis_schedconf.cvmfs.json
[2024-06-16 14:23:29] -rw------- 1 boinc boinc   1316805 16. Jun 10:42 cric_ddmendpoints.json
[2024-06-16 14:23:29] drwx------ 4 boinc boinc      4096 16. Jun 10:42 pilot3
[2024-06-16 14:23:29] -rw------- 1 boinc boinc 350058795 16. Jun 14:21 HITS.38921013._035273.pool.root.1
[2024-06-16 14:23:29] -rw-r--r-- 1 boinc boinc       531 16. Jun 14:22 boinc_task_state.xml
[2024-06-16 14:23:29] -rw------- 1 boinc boinc      1025 16. Jun 14:22 memory_monitor_summary.json
[2024-06-16 14:23:29] -rw------- 1 boinc boinc        95 16. Jun 14:22 pilot_heartbeat.json
[2024-06-16 14:23:29] -rw------- 1 boinc boinc         0 16. Jun 14:22 agis_ddmendpoints.agis.ALL.json
[2024-06-16 14:23:29] -rw------- 1 boinc boinc    350012 16. Jun 14:22 log.38921013._035273.job.log.tgz.1
[2024-06-16 14:23:29] -rw------- 1 boinc boinc      7684 16. Jun 14:23 heartbeat.json
[2024-06-16 14:23:29] -rw-r--r-- 1 boinc boinc      8192 16. Jun 14:23 boinc_mmap_file
[2024-06-16 14:23:29] -rw-r--r-- 1 boinc boinc        28 16. Jun 14:23 wrapper_checkpoint.txt
[2024-06-16 14:23:29] -rw------- 1 boinc boinc      4592 16. Jun 14:23 pilotlog.txt
[2024-06-16 14:23:29] -rw------- 1 boinc boinc   1270874 16. Jun 14:23 log.38921013._035273.job.log.1
[2024-06-16 14:23:29] -rw------- 1 boinc boinc       357 16. Jun 14:23 output.list
[2024-06-16 14:23:29] -rw-r--r-- 1 boinc boinc       620 16. Jun 14:23 runtime_log
[2024-06-16 14:23:29] -rw------- 1 boinc boinc   1638400 16. Jun 14:23 result.tar.gz
[2024-06-16 14:23:29] -rw-r--r-- 1 boinc boinc     11335 16. Jun 14:23 runtime_log.err
[2024-06-16 14:23:29] -rw------- 1 boinc boinc       634 16. Jun 14:23 4LCLDmdhNc5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDma6eKDm5xagBo.diag
[2024-06-16 14:23:29] -rw-r--r-- 1 boinc boinc     21280 16. Jun 14:23 stderr.txt
[2024-06-16 14:23:29] HITS file was successfully produced:
[2024-06-16 14:23:29] -rw------- 1 boinc boinc 350058795 16. Jun 14:21 shared/HITS.pool.root.1
[2024-06-16 14:23:29]  *** Contents of shared directory: ***
[2024-06-16 14:23:29] insgesamt 873048
[2024-06-16 14:23:29] -rw-r--r-- 2 boinc boinc     17537 16. Jun 10:41 start_atlas.sh
[2024-06-16 14:23:29] -rw-r--r-- 2 boinc boinc    482525 16. Jun 10:41 input.tar.gz
[2024-06-16 14:23:29] -rw-r--r-- 2 boinc boinc 541788745 16. Jun 10:41 ATLAS.root_0
[2024-06-16 14:23:29] -rw------- 1 boinc boinc 350058795 16. Jun 14:21 HITS.pool.root.1
[2024-06-16 14:23:29] -rw------- 1 boinc boinc   1638400 16. Jun 14:23 result.tar.gz
14:23:31 (165168): run_atlas exited; CPU time 76119.086876
14:23:31 (165168): called boinc_finish(0)

</stderr_txt>
]]>

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