Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:04:38 (12130): wrapper (7.7.26015): starting
13:04:38 (12130): wrapper: running run_atlas (--nthreads 8)
[2024-06-14 13:04:38] Arguments: --nthreads 8
[2024-06-14 13:04:38] Threads: 8
[2024-06-14 13:04:38] Checking for CVMFS
[2024-06-14 13:04:38] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-14 13:04:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-14 13:04:38] Running cvmfs_config stat atlas.cern.ch
[2024-06-14 13:04:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-14 13:04:38] 2.11.2.0 51441 4026 170384 133875 1 251 17215950 18432000 13885 130560 0 19953588 99.136 36996164 40324 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-06-14 13:04:38] CVMFS is ok
[2024-06-14 13:04:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-14 13:04:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-14 13:04:38] Further information can be found at the LHC@home message board.
[2024-06-14 13:04:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-14 13:04:38] Checking for apptainer binary...
[2024-06-14 13:04:38] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-14 13:04:38] Running /usr/bin/apptainer --version
[2024-06-14 13:04:38] apptainer version 1.3.2-1.el7
[2024-06-14 13:04:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-14 13:04:39] c-211-35-1.aglt2.org
[2024-06-14 13:04:39] apptainer works
[2024-06-14 13:04:39] Set ATHENA_PROC_NUMBER=8
[2024-06-14 13:04:39] Set ATHENA_CORE_NUMBER=8
[2024-06-14 13:04:39] Starting ATLAS job with PandaID=6230315830
[2024-06-14 13:04:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-14 22:54:36]  *** The last 200 lines of the pilot log: ***
[2024-06-14 22:54:36] 2024-06-15 02:54:09,670 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-06-14 22:54:36] 2024-06-15 02:54:09,765 | INFO     | job 6230315830 has state=finished
[2024-06-14 22:54:36] 2024-06-15 02:54:09,765 | INFO     | preparing for final server update for job 6230315830 in state='finished'
[2024-06-14 22:54:36] 2024-06-15 02:54:09,765 | INFO     | this job has now completed (state=finished)
[2024-06-14 22:54:36] 2024-06-15 02:54:09,765 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-06-14 22:54:36] 2024-06-15 02:54:09,766 | INFO     | job 6230315830 has finished - writing final server update
[2024-06-14 22:54:36] 2024-06-15 02:54:09,766 | INFO     | total number of processed events: 400 (read)
[2024-06-14 22:54:36] 2024-06-15 02:54:09,771 | INFO     | executing command: lscpu
[2024-06-14 22:54:36] 2024-06-15 02:54:09,851 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-06-14 22:54:36] 2024-06-15 02:54:09,851 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-06-14 22:54:36] 2024-06-15 02:54:09,932 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-06-14 22:54:36] 2024-06-15 02:54:14,977 | INFO     | CPU arch script returned: x86-64-v4
[2024-06-14 22:54:36] 2024-06-15 02:54:14,978 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6230315830/memory_monitor_summary.json (trf name=prmon)
[2024-06-14 22:54:36] 2024-06-15 02:54:14,982 | INFO     | extracted standard info from prmon json
[2024-06-14 22:54:36] 2024-06-15 02:54:14,983 | INFO     | extracted standard memory fields from prmon json
[2024-06-14 22:54:36] 2024-06-15 02:54:14,983 | WARNING  | GPU info not found in prmon json
[2024-06-14 22:54:36] 2024-06-15 02:54:14,983 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-14 22:54:36] 2024-06-15 02:54:14,984 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-14 22:54:36] 2024-06-15 02:54:14,990 | INFO     | fitting pss+swap vs Time
[2024-06-14 22:54:36] 2024-06-15 02:54:14,990 | INFO     | model: linear, x: [1718384735.0, 1718384796.0, 1718384857.0, 1718384918.0, 1718384979.0, 1718385040.0, 1718385101.0, 1718385162.0, 1718385223.0, 1718385284.0, 1718
[2024-06-14 22:54:36] 2024-06-15 02:54:14,991 | INFO     | sum of square deviations: 60188439411.972786
[2024-06-14 22:54:36] 2024-06-15 02:54:14,996 | INFO     | sum of deviations: 1124827174319.96
[2024-06-14 22:54:36] 2024-06-15 02:54:14,996 | INFO     | mean x: 1718402364.0069084
[2024-06-14 22:54:36] 2024-06-15 02:54:14,996 | INFO     | mean y: 2435949.759930915
[2024-06-14 22:54:36] 2024-06-15 02:54:14,996 | INFO     | -- intersect: -32111798849.05981
[2024-06-14 22:54:36] 2024-06-15 02:54:14,996 | INFO     | intersect: -32111798849.05981
[2024-06-14 22:54:36] 2024-06-15 02:54:14,997 | INFO     | chi2: 16.11392479452602
[2024-06-14 22:54:36] 2024-06-15 02:54:14,997 | INFO     | model: linear, x: [1718384735.0, 1718384796.0, 1718384857.0, 1718384918.0, 1718384979.0, 1718385040.0, 1718385101.0, 1718385162.0, 1718385223.0, 1718385284.0, 1718
[2024-06-14 22:54:36] 2024-06-15 02:54:14,997 | INFO     | sum of square deviations: 58642579089.47216
[2024-06-14 22:54:36] 2024-06-15 02:54:15,002 | INFO     | sum of deviations: 1112529843819.3958
[2024-06-14 22:54:36] 2024-06-15 02:54:15,002 | INFO     | mean x: 1718402211.5069687
[2024-06-14 22:54:36] 2024-06-15 02:54:15,002 | INFO     | mean y: 2434737.0261324043
[2024-06-14 22:54:36] 2024-06-15 02:54:15,002 | INFO     | -- intersect: -32598002925.681725
[2024-06-14 22:54:36] 2024-06-15 02:54:15,002 | INFO     | intersect: -32598002925.681725
[2024-06-14 22:54:36] 2024-06-15 02:54:15,003 | INFO     | chi2: 16.109840726946253
[2024-06-14 22:54:36] 2024-06-15 02:54:15,003 | INFO     | current chi2=16.109840726946253 (change=0.025344958672983132 %)
[2024-06-14 22:54:36] 2024-06-15 02:54:15,003 | INFO     | right removable region: 573
[2024-06-14 22:54:36] 2024-06-15 02:54:15,003 | INFO     | model: linear, x: [1718385040.0, 1718385101.0, 1718385162.0, 1718385223.0, 1718385284.0, 1718385345.0, 1718385406.0, 1718385467.0, 1718385528.0, 1718385589.0, 1718
[2024-06-14 22:54:36] 2024-06-15 02:54:15,004 | INFO     | sum of square deviations: 58642576649.472176
[2024-06-14 22:54:36] 2024-06-15 02:54:15,008 | INFO     | sum of deviations: 955483206374.218
[2024-06-14 22:54:36] 2024-06-15 02:54:15,009 | INFO     | mean x: 1718402516.5069687
[2024-06-14 22:54:36] 2024-06-15 02:54:15,009 | INFO     | mean y: 2452641.8205574914
[2024-06-14 22:54:36] 2024-06-15 02:54:15,009 | INFO     | -- intersect: -27996056975.65175
[2024-06-14 22:54:36] 2024-06-15 02:54:15,009 | INFO     | intersect: -27996056975.65175
[2024-06-14 22:54:36] 2024-06-15 02:54:15,009 | INFO     | chi2: 12.608396712415415
[2024-06-14 22:54:36] 2024-06-15 02:54:15,009 | INFO     | current chi2=12.608396712415415 (change=21.754650879973397 %)
[2024-06-14 22:54:36] 2024-06-15 02:54:15,009 | INFO     | left removable region: 10
[2024-06-14 22:54:36] 2024-06-15 02:54:15,010 | INFO     | model: linear, x: [1718385345.0, 1718385406.0, 1718385467.0, 1718385528.0, 1718385589.0, 1718385650.0, 1718385711.0, 1718385772.0, 1718385833.0, 1718385894.0, 1718
[2024-06-14 22:54:36] 2024-06-15 02:54:15,010 | INFO     | sum of square deviations: 55335331627.97132
[2024-06-14 22:54:36] 2024-06-15 02:54:15,015 | INFO     | sum of deviations: 810063406505.7723
[2024-06-14 22:54:36] 2024-06-15 02:54:15,015 | INFO     | mean x: 1718402486.0071049
[2024-06-14 22:54:36] 2024-06-15 02:54:15,015 | INFO     | mean y: 2464962.0568383657
[2024-06-14 22:54:36] 2024-06-15 02:54:15,015 | INFO     | -- intersect: -25153523637.083622
[2024-06-14 22:54:36] 2024-06-15 02:54:15,015 | INFO     | intersect: -25153523637.083622
[2024-06-14 22:54:36] 2024-06-15 02:54:15,016 | INFO     | chi2: 10.592362242752996
[2024-06-14 22:54:36] 2024-06-15 02:54:15,016 | INFO     | -- intersect: -25153523637.083622
[2024-06-14 22:54:36] 2024-06-15 02:54:15,016 | INFO     | current memory leak: 14.64 B/s (using 563 data points, chi2=10.59)
[2024-06-14 22:54:36] 2024-06-15 02:54:15,016 | INFO     | ..............................
[2024-06-14 22:54:36] 2024-06-15 02:54:15,016 | INFO     | . Timing measurements:
[2024-06-14 22:54:36] 2024-06-15 02:54:15,016 | INFO     | . get job = 0 s
[2024-06-14 22:54:36] 2024-06-15 02:54:15,017 | INFO     | . initial setup = 2 s
[2024-06-14 22:54:36] 2024-06-15 02:54:15,017 | INFO     | . payload setup = 9 s
[2024-06-14 22:54:36] 2024-06-15 02:54:15,017 | INFO     | . stage-in = 0 s
[2024-06-14 22:54:36] 2024-06-15 02:54:15,017 | INFO     | . payload execution = 35321 s
[2024-06-14 22:54:36] 2024-06-15 02:54:15,017 | INFO     | . stage-out = 2 s
[2024-06-14 22:54:36] 2024-06-15 02:54:15,017 | INFO     | . log creation = 0 s
[2024-06-14 22:54:36] 2024-06-15 02:54:15,017 | INFO     | ..............................
[2024-06-14 22:54:36] 2024-06-15 02:54:15,074 | INFO     | 
[2024-06-14 22:54:36] 2024-06-15 02:54:15,074 | INFO     | job summary report
[2024-06-14 22:54:36] 2024-06-15 02:54:15,074 | INFO     | --------------------------------------------------
[2024-06-14 22:54:36] 2024-06-15 02:54:15,074 | INFO     | PanDA job id: 6230315830
[2024-06-14 22:54:36] 2024-06-15 02:54:15,074 | INFO     | task id: 38921013
[2024-06-14 22:54:36] 2024-06-15 02:54:15,074 | INFO     | errors: (none)
[2024-06-14 22:54:36] 2024-06-15 02:54:15,074 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-14 22:54:36] 2024-06-15 02:54:15,074 | INFO     | pilot state: finished 
[2024-06-14 22:54:36] 2024-06-15 02:54:15,074 | INFO     | transexitcode: 0
[2024-06-14 22:54:36] 2024-06-15 02:54:15,074 | INFO     | exeerrorcode: 0
[2024-06-14 22:54:36] 2024-06-15 02:54:15,074 | INFO     | exeerrordiag: 
[2024-06-14 22:54:36] 2024-06-15 02:54:15,074 | INFO     | exitcode: 0
[2024-06-14 22:54:36] 2024-06-15 02:54:15,075 | INFO     | exitmsg: OK
[2024-06-14 22:54:36] 2024-06-15 02:54:15,075 | INFO     | cpuconsumptiontime: 179032 s
[2024-06-14 22:54:36] 2024-06-15 02:54:15,075 | INFO     | nevents: 400
[2024-06-14 22:54:36] 2024-06-15 02:54:15,075 | INFO     | neventsw: 0
[2024-06-14 22:54:36] 2024-06-15 02:54:15,075 | INFO     | pid: 39607
[2024-06-14 22:54:36] 2024-06-15 02:54:15,075 | INFO     | pgrp: 39607
[2024-06-14 22:54:36] 2024-06-15 02:54:15,075 | INFO     | corecount: 8
[2024-06-14 22:54:36] 2024-06-15 02:54:15,075 | INFO     | event service: False
[2024-06-14 22:54:36] 2024-06-15 02:54:15,075 | INFO     | sizes: {0: 2378906, 1: 2379105, 7: 2379311, 12: 2379339, 35333: 2419053, 35334: 2419052, 35336: 2428252, 35341: 2428366}
[2024-06-14 22:54:36] 2024-06-15 02:54:15,075 | INFO     | --------------------------------------------------
[2024-06-14 22:54:36] 2024-06-15 02:54:15,075 | INFO     | 
[2024-06-14 22:54:36] 2024-06-15 02:54:15,075 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2024-06-14 22:54:36] 2024-06-15 02:54:15,151 | WARNING  | process 39607 is no longer using CPU - aborting
[2024-06-14 22:54:36] 2024-06-15 02:54:15,151 | INFO     | aborting job monitoring since job object (job id=6230315830) has expired
[2024-06-14 22:54:36] 2024-06-15 02:54:15,179 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-14 22:54:36] 2024-06-15 02:54:15,179 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-14 22:54:36] 2024-06-15 02:54:15,180 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-14 22:54:36] 2024-06-15 02:54:15,180 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-14 22:54:36] 2024-06-15 02:54:15,180 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-14 22:54:36] 2024-06-15 02:54:15,180 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-14 22:54:36] 2024-06-15 02:54:15,180 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-14 22:54:36] 2024-06-15 02:54:15,180 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-14 22:54:36] 2024-06-15 02:54:15,180 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-14 22:54:36] 2024-06-15 02:54:15,180 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-14 22:54:36] 2024-06-15 02:54:15,180 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-14 22:54:36] 2024-06-15 02:54:15,180 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-14 22:54:36] 2024-06-15 02:54:15,180 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-14 22:54:36] 2024-06-15 02:54:15,180 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-14 22:54:36] 2024-06-15 02:54:15,181 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-14 22:54:36] 2024-06-15 02:54:15,181 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-14 22:54:36] 2024-06-15 02:54:15,181 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-14 22:54:36] 2024-06-15 02:54:15,181 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-14 22:54:36] 2024-06-15 02:54:15,181 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-14 22:54:36] 2024-06-15 02:54:15,181 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-14 22:54:36] 2024-06-15 02:54:15,181 | INFO     | job 6230315830 has completed (purged errors)
[2024-06-14 22:54:36] 2024-06-15 02:54:15,181 | INFO     | overall cleanup function is called
[2024-06-14 22:54:36] 2024-06-15 02:54:16,190 | INFO     | --- collectZombieJob: --- 10, [39607]
[2024-06-14 22:54:36] 2024-06-15 02:54:16,190 | INFO     | zombie collector waiting for pid 39607
[2024-06-14 22:54:36] 2024-06-15 02:54:16,191 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-14 22:54:36] 2024-06-15 02:54:17,197 | INFO     | collected zombie processes
[2024-06-14 22:54:36] 2024-06-15 02:54:17,197 | INFO     | will now attempt to kill all subprocesses of pid=39607
[2024-06-14 22:54:36] 2024-06-15 02:54:17,422 | INFO     | process IDs to be killed: [39607] (in reverse order)
[2024-06-14 22:54:36] 2024-06-15 02:54:17,548 | WARNING  | found no corresponding commands to process id(s)
[2024-06-14 22:54:36] 2024-06-15 02:54:17,549 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-14 22:54:36] 2024-06-15 02:54:17,562 | INFO     | did not find any defunct processes belonging to 39607
[2024-06-14 22:54:36] 2024-06-15 02:54:17,574 | INFO     | did not find any defunct processes belonging to 39607
[2024-06-14 22:54:36] 2024-06-15 02:54:17,575 | INFO     | ready for new job
[2024-06-14 22:54:36] 2024-06-15 02:54:17,575 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-14 22:54:36] 2024-06-15 02:54:17,578 | INFO     | *************************************
[2024-06-14 22:54:36] 2024-06-15 02:54:17,578 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-14 22:54:36] 2024-06-15 02:54:17,578 | INFO     | *************************************
[2024-06-14 22:54:36] 2024-06-15 02:54:17,578 | INFO     | 
[2024-06-14 22:54:36] 2024-06-15 02:54:17,584 | INFO     | architecture information:
[2024-06-14 22:54:36] 2024-06-15 02:54:17,585 | INFO     | executing command: cat /etc/os-release
[2024-06-14 22:54:36] 2024-06-15 02:54:17,604 | INFO     | cat /etc/os-release:
[2024-06-14 22:54:36] NAME="CentOS Linux"
[2024-06-14 22:54:36] VERSION="7 (Core)"
[2024-06-14 22:54:36] ID="centos"
[2024-06-14 22:54:36] ID_LIKE="rhel fedora"
[2024-06-14 22:54:36] VERSION_ID="7"
[2024-06-14 22:54:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-14 22:54:36] ANSI_COLOR="0;31"
[2024-06-14 22:54:36] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-14 22:54:36] HOME_URL="https://www.centos.org/"
[2024-06-14 22:54:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-14 22:54:36] 
[2024-06-14 22:54:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-14 22:54:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-14 22:54:36] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-14 22:54:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-14 22:54:36] 
[2024-06-14 22:54:36] 2024-06-15 02:54:17,604 | INFO     | *************************************
[2024-06-14 22:54:36] 2024-06-15 02:54:18,107 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2024-06-14 22:54:36] 2024-06-15 02:54:18,128 | INFO     | sufficient remaining disk space (105316876288 B)
[2024-06-14 22:54:36] 2024-06-15 02:54:18,128 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-14 22:54:36] 2024-06-15 02:54:18,128 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-14 22:54:36] 2024-06-15 02:54:18,129 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-14 22:54:36] 2024-06-15 02:54:18,199 | INFO     | found 0 job(s) in 20 queues
[2024-06-14 22:54:36] 2024-06-15 02:54:18,200 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-14 22:54:36] 2024-06-15 02:54:18,200 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-14 22:54:36] 2024-06-15 02:54:18,523 | INFO     | all payload control threads have been joined
[2024-06-14 22:54:36] 2024-06-15 02:54:18,660 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-14 22:54:36] 2024-06-15 02:54:18,661 | INFO     | aborting loop
[2024-06-14 22:54:36] 2024-06-15 02:54:18,905 | INFO     | all data control threads have been joined
[2024-06-14 22:54:36] 2024-06-15 02:54:18,979 | INFO     | all job control threads have been joined
[2024-06-14 22:54:36] 2024-06-15 02:54:19,134 | INFO     | [job] retrieve thread has finished
[2024-06-14 22:54:36] 2024-06-15 02:54:19,405 | INFO     | [job] create_data_payload thread has finished
[2024-06-14 22:54:36] 2024-06-15 02:54:19,423 | INFO     | [payload] validate_pre thread has finished
[2024-06-14 22:54:36] 2024-06-15 02:54:19,529 | INFO     | [payload] control thread has finished
[2024-06-14 22:54:36] 2024-06-15 02:54:19,625 | INFO     | [payload] validate_post thread has finished
[2024-06-14 22:54:36] 2024-06-15 02:54:19,666 | INFO     | [job] job monitor thread has finished
[2024-06-14 22:54:36] 2024-06-15 02:54:19,910 | INFO     | [data] control thread has finished
[2024-06-14 22:54:36] 2024-06-15 02:54:19,985 | INFO     | [job] control thread has finished
[2024-06-14 22:54:36] 2024-06-15 02:54:20,084 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-14 22:54:36] 2024-06-15 02:54:20,131 | INFO     | [payload] failed_post thread has finished
[2024-06-14 22:54:36] 2024-06-15 02:54:20,134 | INFO     | [data] copytool_out thread has finished
[2024-06-14 22:54:36] 2024-06-15 02:54:20,199 | INFO     | [data] copytool_in thread has finished
[2024-06-14 22:54:36] 2024-06-15 02:54:20,221 | INFO     | [payload] execute_payloads thread has finished
[2024-06-14 22:54:36] 2024-06-15 02:54:20,274 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-14 22:54:36] 2024-06-15 02:54:20,411 | INFO     | [job] validate thread has finished
[2024-06-14 22:54:36] 2024-06-15 02:54:21,090 | INFO     | [job] queue monitor thread has finished
[2024-06-14 22:54:36] 2024-06-15 02:54:24,281 | INFO     | [data] queue_monitor thread has finished
[2024-06-14 22:54:36] 2024-06-15 02:54:28,408 | INFO     | job.realtimelogging is not enabled
[2024-06-14 22:54:36] 2024-06-15 02:54:29,414 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-14 22:54:36] 2024-06-15 02:54:30,649 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140042446157632)>', '<ExcThread(monitor, started 140041997231872)>']
[2024-06-14 22:54:36] 2024-06-15 02:54:31,269 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-14 22:54:36] 2024-06-15 02:54:31,270 | INFO     | [monitor] control thread has ended
[2024-06-14 22:54:36] 2024-06-15 02:54:35,675 | INFO     | all workflow threads have been joined
[2024-06-14 22:54:36] 2024-06-15 02:54:35,675 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-14 22:54:36] 2024-06-15 02:54:35,676 | INFO     | traces error code: 0
[2024-06-14 22:54:36] 2024-06-15 02:54:35,676 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-14 22:54:36] 2024-06-15 02:54:35,809 [wrapper] ==== pilot stdout END ====
[2024-06-14 22:54:36] 2024-06-15 02:54:35,812 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-14 22:54:36] 2024-06-15 02:54:35,814 [wrapper] pilotpid: 21920
[2024-06-14 22:54:36] 2024-06-15 02:54:35,817 [wrapper] Pilot exit status: 0
[2024-06-14 22:54:36] 2024-06-15 02:54:35,838 [wrapper] pandaids: 6230315830
[2024-06-14 22:54:36] 2024-06-15 02:54:35,926 [wrapper] cleanup supervisor_pilot 245637 21921
[2024-06-14 22:54:36] 2024-06-15 02:54:35,929 [wrapper] Test setup, not cleaning
[2024-06-14 22:54:36] 2024-06-15 02:54:35,932 [wrapper] ==== wrapper stdout END ====
[2024-06-14 22:54:36] 2024-06-15 02:54:35,934 [wrapper] ==== wrapper stderr END ====
[2024-06-14 22:54:36] 2024-06-15 02:54:35,940 [wrapper] apfmon messages muted
[2024-06-14 22:54:36]  *** Error codes and diagnostics ***
[2024-06-14 22:54:36]     "exeErrorCode": 0,
[2024-06-14 22:54:36]     "exeErrorDiag": "",
[2024-06-14 22:54:36]     "pilotErrorCode": 0,
[2024-06-14 22:54:36]     "pilotErrorDiag": "",
[2024-06-14 22:54:36]  *** Listing of results directory ***
[2024-06-14 22:54:36] total 877068
[2024-06-14 22:54:36] -rw-r--r-- 1 boincer umatlas      5654 Jun 14 07:52 queuedata.json
[2024-06-14 22:54:36] -rw-r--r-- 1 boincer umatlas    469766 Jun 14 07:53 pilot3.tar.gz
[2024-06-14 22:54:36] -rwx------ 1 boincer umatlas     32308 Jun 14 07:53 runpilot2-wrapper.sh
[2024-06-14 22:54:36] -rw-r--r-- 1 boincer umatlas       100 Jun 14 13:04 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-14 22:54:36] -rwxr-xr-x 1 boincer umatlas      7986 Jun 14 13:04 run_atlas
[2024-06-14 22:54:36] -rw-r--r-- 1 boincer umatlas       105 Jun 14 13:04 job.xml
[2024-06-14 22:54:36] -rw-r--r-- 2 boincer umatlas 539592024 Jun 14 13:04 EVNT.38776210._000899.pool.root.1
[2024-06-14 22:54:36] -rw-r--r-- 2 boincer umatlas     17537 Jun 14 13:04 start_atlas.sh
[2024-06-14 22:54:36] drwxrwx--x 2 boincer umatlas      4096 Jun 14 13:04 shared
[2024-06-14 22:54:36] -rw-r--r-- 2 boincer umatlas    482515 Jun 14 13:04 input.tar.gz
[2024-06-14 22:54:36] -rw-r--r-- 1 boincer umatlas         0 Jun 14 13:04 boinc_lockfile
[2024-06-14 22:54:36] -rw-r--r-- 1 boincer umatlas      2645 Jun 14 13:04 pandaJob.out
[2024-06-14 22:54:36] -rw------- 1 boincer umatlas       467 Jun 14 13:04 setup.sh.local
[2024-06-14 22:54:36] -rw------- 1 boincer umatlas   1020548 Jun 14 13:04 agis_schedconf.cvmfs.json
[2024-06-14 22:54:36] -rw------- 1 boincer umatlas   1316805 Jun 14 13:04 cric_ddmendpoints.json
[2024-06-14 22:54:36] drwx------ 4 boincer umatlas      4096 Jun 14 13:04 pilot3
[2024-06-14 22:54:36] -rw-r--r-- 1 boincer umatlas      6387 Jun 14 22:49 init_data.xml
[2024-06-14 22:54:36] -rw------- 1 boincer umatlas 346904762 Jun 14 22:53 HITS.38921013._034701.pool.root.1
[2024-06-14 22:54:36] -rw-r--r-- 1 boincer umatlas       533 Jun 14 22:53 boinc_task_state.xml
[2024-06-14 22:54:36] -rw------- 1 boincer umatlas      1062 Jun 14 22:54 memory_monitor_summary.json
[2024-06-14 22:54:36] -rw------- 1 boincer umatlas         0 Jun 14 22:54 agis_ddmendpoints.agis.ALL.json
[2024-06-14 22:54:36] -rw------- 1 boincer umatlas    603882 Jun 14 22:54 log.38921013._034701.job.log.tgz.1
[2024-06-14 22:54:36] -rw------- 1 boincer umatlas        95 Jun 14 22:54 pilot_heartbeat.json
[2024-06-14 22:54:36] -rw------- 1 boincer umatlas      7778 Jun 14 22:54 heartbeat.json
[2024-06-14 22:54:36] -rw-r--r-- 1 boincer umatlas      8192 Jun 14 22:54 boinc_mmap_file
[2024-06-14 22:54:36] -rw-r--r-- 1 boincer umatlas        29 Jun 14 22:54 wrapper_checkpoint.txt
[2024-06-14 22:54:36] -rw------- 1 boincer umatlas      4284 Jun 14 22:54 pilotlog.txt
[2024-06-14 22:54:36] -rw------- 1 boincer umatlas   3438386 Jun 14 22:54 log.38921013._034701.job.log.1
[2024-06-14 22:54:36] -rw------- 1 boincer umatlas       357 Jun 14 22:54 output.list
[2024-06-14 22:54:36] -rw-r--r-- 1 boincer umatlas       620 Jun 14 22:54 runtime_log
[2024-06-14 22:54:36] -rw------- 1 boincer umatlas   4065280 Jun 14 22:54 result.tar.gz
[2024-06-14 22:54:36] -rw-r--r-- 1 boincer umatlas     11415 Jun 14 22:54 runtime_log.err
[2024-06-14 22:54:36] -rw------- 1 boincer umatlas       655 Jun 14 22:54 5dhLDm3fKc5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmdxeKDmb10gom.diag
[2024-06-14 22:54:36] -rw-r--r-- 1 boincer umatlas     21762 Jun 14 22:54 stderr.txt
[2024-06-14 22:54:36] HITS file was successfully produced:
[2024-06-14 22:54:36] -rw------- 1 boincer umatlas 346904762 Jun 14 22:53 shared/HITS.pool.root.1
[2024-06-14 22:54:36]  *** Contents of shared directory: ***
[2024-06-14 22:54:36] total 870196
[2024-06-14 22:54:36] -rw-r--r-- 2 boincer umatlas 539592024 Jun 14 13:04 ATLAS.root_0
[2024-06-14 22:54:36] -rw-r--r-- 2 boincer umatlas     17537 Jun 14 13:04 start_atlas.sh
[2024-06-14 22:54:36] -rw-r--r-- 2 boincer umatlas    482515 Jun 14 13:04 input.tar.gz
[2024-06-14 22:54:36] -rw------- 1 boincer umatlas 346904762 Jun 14 22:53 HITS.pool.root.1
[2024-06-14 22:54:36] -rw------- 1 boincer umatlas   4065280 Jun 14 22:54 result.tar.gz
22:54:37 (12130): run_atlas exited; CPU time 178347.625765
22:54:37 (12130): called boinc_finish(0)

</stderr_txt>
]]>

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