Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
23:53:37 (183891): wrapper (7.7.26015): starting
23:53:37 (183891): wrapper: running run_atlas (--nthreads 6)
[2024-06-17 23:53:37] Arguments: --nthreads 6
[2024-06-17 23:53:37] Threads: 6
[2024-06-17 23:53:37] Checking for CVMFS
[2024-06-17 23:53:37] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-17 23:53:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-17 23:53:38] Running cvmfs_config stat atlas.cern.ch
[2024-06-17 23:53:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-17 23:53:38] 2.10.1.0 2030 43932 58828 133988 2 56 3775497 6144001 0 130560 0 36578159 99.974 6632397 6859 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.202:3128 1
[2024-06-17 23:53:38] CVMFS is ok
[2024-06-17 23:53:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-17 23:53:38] Checking for apptainer binary...
[2024-06-17 23:53:38] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-17 23:53:38] Running /usr/bin/apptainer --version
[2024-06-17 23:53:38] apptainer version 1.3.0
[2024-06-17 23:53:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-17 23:53:38] Beta
[2024-06-17 23:53:38] apptainer works
[2024-06-17 23:53:38] Set ATHENA_PROC_NUMBER=6
[2024-06-17 23:53:38] Set ATHENA_CORE_NUMBER=6
[2024-06-17 23:53:38] Starting ATLAS job with PandaID=6230126295
[2024-06-17 23:53:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-18 04:47:12]  *** The last 200 lines of the pilot log: ***
[2024-06-18 04:47:12] 2024-06-18 02:46:48,793 | INFO     | monitor loop #1396: job 0:6230126295 is in state 'finished'
[2024-06-18 04:47:12] 2024-06-18 02:46:48,793 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-18 04:47:12] 2024-06-18 02:46:51,099 | INFO     | CPU arch script returned: x86-64-v3
[2024-06-18 04:47:12] 2024-06-18 02:46:51,099 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6230126295/memory_monitor_summary.json (trf name=prmon)
[2024-06-18 04:47:12] 2024-06-18 02:46:51,099 | INFO     | extracted standard info from prmon json
[2024-06-18 04:47:12] 2024-06-18 02:46:51,099 | INFO     | extracted standard memory fields from prmon json
[2024-06-18 04:47:12] 2024-06-18 02:46:51,100 | WARNING  | GPU info not found in prmon json
[2024-06-18 04:47:12] 2024-06-18 02:46:51,100 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-18 04:47:12] 2024-06-18 02:46:51,100 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-18 04:47:12] 2024-06-18 02:46:51,102 | INFO     | fitting pss+swap vs Time
[2024-06-18 04:47:12] 2024-06-18 02:46:51,102 | INFO     | model: linear, x: [1718661247.0, 1718661308.0, 1718661369.0, 1718661430.0, 1718661491.0, 1718661552.0, 1718661613.0, 1718661674.0, 1718661735.0, 1718661796.0, 1718
[2024-06-18 04:47:12] 2024-06-18 02:46:51,102 | INFO     | sum of square deviations: 7330250928.0
[2024-06-18 04:47:12] 2024-06-18 02:46:51,103 | INFO     | sum of deviations: 53785588987.0
[2024-06-18 04:47:12] 2024-06-18 02:46:51,103 | INFO     | mean x: 1718669970.0
[2024-06-18 04:47:12] 2024-06-18 02:46:51,103 | INFO     | mean y: 2527332.463414634
[2024-06-18 04:47:12] 2024-06-18 02:46:51,103 | INFO     | -- intersect: -12608183749.420523
[2024-06-18 04:47:12] 2024-06-18 02:46:51,103 | INFO     | intersect: -12608183749.420523
[2024-06-18 04:47:12] 2024-06-18 02:46:51,104 | INFO     | chi2: 1.8057281685011939
[2024-06-18 04:47:12] 2024-06-18 02:46:51,104 | INFO     | model: linear, x: [1718661247.0, 1718661308.0, 1718661369.0, 1718661430.0, 1718661491.0, 1718661552.0, 1718661613.0, 1718661674.0, 1718661735.0, 1718661796.0, 1718
[2024-06-18 04:47:12] 2024-06-18 02:46:51,104 | INFO     | sum of square deviations: 6953769450.5
[2024-06-18 04:47:12] 2024-06-18 02:46:51,105 | INFO     | sum of deviations: 53146071056.499985
[2024-06-18 04:47:12] 2024-06-18 02:46:51,105 | INFO     | mean x: 1718669817.5
[2024-06-18 04:47:12] 2024-06-18 02:46:51,105 | INFO     | mean y: 2527073.585106383
[2024-06-18 04:47:12] 2024-06-18 02:46:51,105 | INFO     | -- intersect: -13132873645.941072
[2024-06-18 04:47:12] 2024-06-18 02:46:51,105 | INFO     | intersect: -13132873645.941072
[2024-06-18 04:47:12] 2024-06-18 02:46:51,105 | INFO     | chi2: 1.8061449849142848
[2024-06-18 04:47:12] 2024-06-18 02:46:51,105 | INFO     | current chi2=1.8061449849142848 (change=-0.023083009965827298 %)
[2024-06-18 04:47:12] 2024-06-18 02:46:51,105 | INFO     | right removable region: 281
[2024-06-18 04:47:12] 2024-06-18 02:46:51,105 | INFO     | model: linear, x: [1718661552.0, 1718661613.0, 1718661674.0, 1718661735.0, 1718661796.0, 1718661857.0, 1718661918.0, 1718661979.0, 1718662040.0, 1718662101.0, 1718
[2024-06-18 04:47:12] 2024-06-18 02:46:51,105 | INFO     | sum of square deviations: 6953769450.5
[2024-06-18 04:47:12] 2024-06-18 02:46:51,106 | INFO     | sum of deviations: -1297210658.5000007
[2024-06-18 04:47:12] 2024-06-18 02:46:51,106 | INFO     | mean x: 1718670122.5
[2024-06-18 04:47:12] 2024-06-18 02:46:51,106 | INFO     | mean y: 2549534.4219858157
[2024-06-18 04:47:12] 2024-06-18 02:46:51,106 | INFO     | -- intersect: 323163730.3948182
[2024-06-18 04:47:12] 2024-06-18 02:46:51,106 | INFO     | intersect: 323163730.3948182
[2024-06-18 04:47:12] 2024-06-18 02:46:51,107 | INFO     | chi2: 0.13869879898939083
[2024-06-18 04:47:12] 2024-06-18 02:46:51,107 | INFO     | current chi2=0.13869879898939083 (change=92.31895467940146 %)
[2024-06-18 04:47:12] 2024-06-18 02:46:51,107 | INFO     | model: linear, x: [1718661857.0, 1718661918.0, 1718661979.0, 1718662040.0, 1718662101.0, 1718662162.0, 1718662223.0, 1718662284.0, 1718662345.0, 1718662406.0, 1718
[2024-06-18 04:47:12] 2024-06-18 02:46:51,107 | INFO     | sum of square deviations: 6590404498.0
[2024-06-18 04:47:12] 2024-06-18 02:46:51,108 | INFO     | sum of deviations: 5786793487.000002
[2024-06-18 04:47:12] 2024-06-18 02:46:51,108 | INFO     | mean x: 1718670275.0
[2024-06-18 04:47:12] 2024-06-18 02:46:51,108 | INFO     | mean y: 2546542.8736462095
[2024-06-18 04:47:12] 2024-06-18 02:46:51,108 | INFO     | -- intersect: -1506555054.2572591
[2024-06-18 04:47:12] 2024-06-18 02:46:51,108 | INFO     | intersect: -1506555054.2572591
[2024-06-18 04:47:12] 2024-06-18 02:46:51,108 | INFO     | chi2: 0.10740744575172956
[2024-06-18 04:47:12] 2024-06-18 02:46:51,108 | INFO     | current chi2=0.10740744575172956 (change=22.56065190590062 %)
[2024-06-18 04:47:12] 2024-06-18 02:46:51,108 | INFO     | left removable region: 20
[2024-06-18 04:47:12] 2024-06-18 02:46:51,108 | INFO     | model: linear, x: [1718662467.0, 1718662528.0, 1718662589.0, 1718662650.0, 1718662711.0, 1718662772.0, 1718662833.0, 1718662894.0, 1718662955.0, 1718663016.0, 1718
[2024-06-18 04:47:12] 2024-06-18 02:46:51,108 | INFO     | sum of square deviations: 5513070810.0
[2024-06-18 04:47:12] 2024-06-18 02:46:51,109 | INFO     | sum of deviations: 13433221994.0
[2024-06-18 04:47:12] 2024-06-18 02:46:51,109 | INFO     | mean x: 1718670397.0
[2024-06-18 04:47:12] 2024-06-18 02:46:51,109 | INFO     | mean y: 2543359.049808429
[2024-06-18 04:47:12] 2024-06-18 02:46:51,109 | INFO     | -- intersect: -4185191892.8790727
[2024-06-18 04:47:12] 2024-06-18 02:46:51,109 | INFO     | intersect: -4185191892.8790727
[2024-06-18 04:47:12] 2024-06-18 02:46:51,109 | INFO     | chi2: 0.019269343725015868
[2024-06-18 04:47:12] 2024-06-18 02:46:51,110 | INFO     | -- intersect: -4185191892.8790727
[2024-06-18 04:47:12] 2024-06-18 02:46:51,110 | INFO     | current memory leak: 2.44 B/s (using 261 data points, chi2=0.02)
[2024-06-18 04:47:12] 2024-06-18 02:46:51,110 | INFO     | ..............................
[2024-06-18 04:47:12] 2024-06-18 02:46:51,110 | INFO     | . Timing measurements:
[2024-06-18 04:47:12] 2024-06-18 02:46:51,110 | INFO     | . get job = 0 s
[2024-06-18 04:47:12] 2024-06-18 02:46:51,110 | INFO     | . initial setup = 1 s
[2024-06-18 04:47:12] 2024-06-18 02:46:51,110 | INFO     | . payload setup = 4 s
[2024-06-18 04:47:12] 2024-06-18 02:46:51,110 | INFO     | . stage-in = 0 s
[2024-06-18 04:47:12] 2024-06-18 02:46:51,110 | INFO     | . payload execution = 17507 s
[2024-06-18 04:47:12] 2024-06-18 02:46:51,110 | INFO     | . stage-out = 0 s
[2024-06-18 04:47:12] 2024-06-18 02:46:51,110 | INFO     | . log creation = 0 s
[2024-06-18 04:47:12] 2024-06-18 02:46:51,110 | INFO     | ..............................
[2024-06-18 04:47:12] 2024-06-18 02:46:51,147 | INFO     | 
[2024-06-18 04:47:12] 2024-06-18 02:46:51,147 | INFO     | job summary report
[2024-06-18 04:47:12] 2024-06-18 02:46:51,147 | INFO     | --------------------------------------------------
[2024-06-18 04:47:12] 2024-06-18 02:46:51,147 | INFO     | PanDA job id: 6230126295
[2024-06-18 04:47:12] 2024-06-18 02:46:51,147 | INFO     | task id: 38921013
[2024-06-18 04:47:12] 2024-06-18 02:46:51,147 | INFO     | errors: (none)
[2024-06-18 04:47:12] 2024-06-18 02:46:51,147 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-18 04:47:12] 2024-06-18 02:46:51,147 | INFO     | pilot state: finished 
[2024-06-18 04:47:12] 2024-06-18 02:46:51,147 | INFO     | transexitcode: 0
[2024-06-18 04:47:12] 2024-06-18 02:46:51,147 | INFO     | exeerrorcode: 0
[2024-06-18 04:47:12] 2024-06-18 02:46:51,147 | INFO     | exeerrordiag: 
[2024-06-18 04:47:12] 2024-06-18 02:46:51,147 | INFO     | exitcode: 0
[2024-06-18 04:47:12] 2024-06-18 02:46:51,147 | INFO     | exitmsg: OK
[2024-06-18 04:47:12] 2024-06-18 02:46:51,147 | INFO     | cpuconsumptiontime: 102132 s
[2024-06-18 04:47:12] 2024-06-18 02:46:51,147 | INFO     | nevents: 400
[2024-06-18 04:47:12] 2024-06-18 02:46:51,147 | INFO     | neventsw: 0
[2024-06-18 04:47:12] 2024-06-18 02:46:51,147 | INFO     | pid: 194524
[2024-06-18 04:47:12] 2024-06-18 02:46:51,147 | INFO     | pgrp: 194524
[2024-06-18 04:47:12] 2024-06-18 02:46:51,147 | INFO     | corecount: 6
[2024-06-18 04:47:12] 2024-06-18 02:46:51,147 | INFO     | event service: False
[2024-06-18 04:47:12] 2024-06-18 02:46:51,147 | INFO     | sizes: {0: 2379082, 2: 2379288, 10: 2379316, 17516: 2411517, 17517: 2420477, 17518: 2420533, 17572: 2420831}
[2024-06-18 04:47:12] 2024-06-18 02:46:51,147 | INFO     | --------------------------------------------------
[2024-06-18 04:47:12] 2024-06-18 02:46:51,148 | INFO     | 
[2024-06-18 04:47:12] 2024-06-18 02:46:51,148 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2024-06-18 04:47:12] 2024-06-18 02:46:51,159 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-18 04:47:12] 2024-06-18 02:46:51,159 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-18 04:47:12] 2024-06-18 02:46:51,159 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-18 04:47:12] 2024-06-18 02:46:51,159 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-18 04:47:12] 2024-06-18 02:46:51,160 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-18 04:47:12] 2024-06-18 02:46:51,160 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-18 04:47:12] 2024-06-18 02:46:51,160 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-18 04:47:12] 2024-06-18 02:46:51,160 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-18 04:47:12] 2024-06-18 02:46:51,160 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-18 04:47:12] 2024-06-18 02:46:51,160 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-18 04:47:12] 2024-06-18 02:46:51,160 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-18 04:47:12] 2024-06-18 02:46:51,160 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-18 04:47:12] 2024-06-18 02:46:51,160 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-18 04:47:12] 2024-06-18 02:46:51,160 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-18 04:47:12] 2024-06-18 02:46:51,160 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-18 04:47:12] 2024-06-18 02:46:51,160 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-18 04:47:12] 2024-06-18 02:46:51,160 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-18 04:47:12] 2024-06-18 02:46:51,160 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-18 04:47:12] 2024-06-18 02:46:51,160 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-18 04:47:12] 2024-06-18 02:46:51,160 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-18 04:47:12] 2024-06-18 02:46:51,161 | INFO     | job 6230126295 has completed (purged errors)
[2024-06-18 04:47:12] 2024-06-18 02:46:51,161 | INFO     | overall cleanup function is called
[2024-06-18 04:47:12] 2024-06-18 02:46:52,167 | INFO     | --- collectZombieJob: --- 10, [194524]
[2024-06-18 04:47:12] 2024-06-18 02:46:52,168 | INFO     | zombie collector waiting for pid 194524
[2024-06-18 04:47:12] 2024-06-18 02:46:52,168 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-18 04:47:12] 2024-06-18 02:46:53,174 | INFO     | collected zombie processes
[2024-06-18 04:47:12] 2024-06-18 02:46:53,174 | INFO     | will now attempt to kill all subprocesses of pid=194524
[2024-06-18 04:47:12] 2024-06-18 02:46:53,219 | INFO     | process IDs to be killed: [194524] (in reverse order)
[2024-06-18 04:47:12] 2024-06-18 02:46:53,242 | WARNING  | found no corresponding commands to process id(s)
[2024-06-18 04:47:12] 2024-06-18 02:46:53,243 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-18 04:47:12] 2024-06-18 02:46:53,244 | INFO     | did not find any defunct processes belonging to 194524
[2024-06-18 04:47:12] 2024-06-18 02:46:53,245 | INFO     | did not find any defunct processes belonging to 194524
[2024-06-18 04:47:12] 2024-06-18 02:46:53,245 | INFO     | ready for new job
[2024-06-18 04:47:12] 2024-06-18 02:46:53,245 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-18 04:47:12] 2024-06-18 02:46:53,246 | INFO     | *************************************
[2024-06-18 04:47:12] 2024-06-18 02:46:53,246 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-18 04:47:12] 2024-06-18 02:46:53,246 | INFO     | *************************************
[2024-06-18 04:47:12] 2024-06-18 02:46:53,246 | INFO     | 
[2024-06-18 04:47:12] 2024-06-18 02:46:53,247 | INFO     | architecture information:
[2024-06-18 04:47:12] 2024-06-18 02:46:53,247 | INFO     | executing command: cat /etc/os-release
[2024-06-18 04:47:12] 2024-06-18 02:46:53,255 | INFO     | cat /etc/os-release:
[2024-06-18 04:47:12] NAME="CentOS Linux"
[2024-06-18 04:47:12] VERSION="7 (Core)"
[2024-06-18 04:47:12] ID="centos"
[2024-06-18 04:47:12] ID_LIKE="rhel fedora"
[2024-06-18 04:47:12] VERSION_ID="7"
[2024-06-18 04:47:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-18 04:47:12] ANSI_COLOR="0;31"
[2024-06-18 04:47:12] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-18 04:47:12] HOME_URL="https://www.centos.org/"
[2024-06-18 04:47:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-18 04:47:12] 
[2024-06-18 04:47:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-18 04:47:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-18 04:47:12] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-18 04:47:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-18 04:47:12] 
[2024-06-18 04:47:12] 2024-06-18 02:46:53,255 | INFO     | *************************************
[2024-06-18 04:47:12] 2024-06-18 02:46:53,759 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2024-06-18 04:47:12] 2024-06-18 02:46:53,773 | INFO     | sufficient remaining disk space (280083038208 B)
[2024-06-18 04:47:12] 2024-06-18 02:46:53,773 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-18 04:47:12] 2024-06-18 02:46:53,774 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-18 04:47:12] 2024-06-18 02:46:53,806 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-06-18 04:47:12] 2024-06-18 02:46:53,806 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-06-18 04:47:12] 2024-06-18 02:46:53,807 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-18 04:47:12] 2024-06-18 02:46:53,807 | INFO     | will abort loop
[2024-06-18 04:47:12] 2024-06-18 02:46:54,237 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-18 04:47:12] 2024-06-18 02:46:54,255 | INFO     | all job control threads have been joined
[2024-06-18 04:47:12] 2024-06-18 02:46:54,362 | INFO     | found 0 job(s) in 20 queues
[2024-06-18 04:47:12] 2024-06-18 02:46:54,363 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-18 04:47:12] 2024-06-18 02:46:54,363 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-18 04:47:12] 2024-06-18 02:46:54,514 | INFO     | all data control threads have been joined
[2024-06-18 04:47:12] 2024-06-18 02:46:54,779 | INFO     | [job] retrieve thread has finished
[2024-06-18 04:47:12] 2024-06-18 02:46:54,812 | INFO     | [job] job monitor thread has finished
[2024-06-18 04:47:12] 2024-06-18 02:46:55,004 | INFO     | all payload control threads have been joined
[2024-06-18 04:47:12] 2024-06-18 02:46:55,082 | INFO     | [job] validate thread has finished
[2024-06-18 04:47:12] 2024-06-18 02:46:55,094 | INFO     | [payload] failed_post thread has finished
[2024-06-18 04:47:12] 2024-06-18 02:46:55,104 | INFO     | [payload] validate_post thread has finished
[2024-06-18 04:47:12] 2024-06-18 02:46:55,236 | INFO     | [job] create_data_payload thread has finished
[2024-06-18 04:47:12] 2024-06-18 02:46:55,261 | INFO     | [job] control thread has finished
[2024-06-18 04:47:12] 2024-06-18 02:46:55,392 | INFO     | [payload] validate_pre thread has finished
[2024-06-18 04:47:12] 2024-06-18 02:46:55,520 | INFO     | [data] control thread has finished
[2024-06-18 04:47:12] 2024-06-18 02:46:55,856 | INFO     | [payload] execute_payloads thread has finished
[2024-06-18 04:47:12] 2024-06-18 02:46:55,876 | INFO     | [data] copytool_in thread has finished
[2024-06-18 04:47:12] 2024-06-18 02:46:56,010 | INFO     | [payload] control thread has finished
[2024-06-18 04:47:12] 2024-06-18 02:46:56,159 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-18 04:47:12] 2024-06-18 02:46:56,244 | INFO     | [data] copytool_out thread has finished
[2024-06-18 04:47:12] 2024-06-18 02:46:57,165 | INFO     | [job] queue monitor thread has finished
[2024-06-18 04:47:12] 2024-06-18 02:46:57,169 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-18 04:47:12] 2024-06-18 02:47:01,176 | INFO     | [data] queue_monitor thread has finished
[2024-06-18 04:47:12] 2024-06-18 02:47:04,632 | INFO     | job.realtimelogging is not enabled
[2024-06-18 04:47:12] 2024-06-18 02:47:05,638 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-18 04:47:12] 2024-06-18 02:47:07,013 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139866644522816)>', '<ExcThread(monitor, started 139866297833216)>']
[2024-06-18 04:47:12] 2024-06-18 02:47:07,432 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-18 04:47:12] 2024-06-18 02:47:07,433 | INFO     | [monitor] control thread has ended
[2024-06-18 04:47:12] 2024-06-18 02:47:12,039 | INFO     | all workflow threads have been joined
[2024-06-18 04:47:12] 2024-06-18 02:47:12,040 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-18 04:47:12] 2024-06-18 02:47:12,040 | INFO     | traces error code: 0
[2024-06-18 04:47:12] 2024-06-18 02:47:12,041 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-18 04:47:12] 2024-06-18 02:47:12,105 [wrapper] ==== pilot stdout END ====
[2024-06-18 04:47:12] 2024-06-18 02:47:12,107 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-18 04:47:12] 2024-06-18 02:47:12,109 [wrapper] pilotpid: 188081
[2024-06-18 04:47:12] 2024-06-18 02:47:12,111 [wrapper] Pilot exit status: 0
[2024-06-18 04:47:12] 2024-06-18 02:47:12,117 [wrapper] pandaids: 6230126295
[2024-06-18 04:47:12] 2024-06-18 02:47:12,133 [wrapper] cleanup supervisor_pilot  227008 188082
[2024-06-18 04:47:12] 2024-06-18 02:47:12,135 [wrapper] Test setup, not cleaning
[2024-06-18 04:47:12] 2024-06-18 02:47:12,136 [wrapper] ==== wrapper stdout END ====
[2024-06-18 04:47:12] 2024-06-18 02:47:12,138 [wrapper] ==== wrapper stderr END ====
[2024-06-18 04:47:12] 2024-06-18 02:47:12,141 [wrapper] apfmon messages muted
[2024-06-18 04:47:12]  *** Error codes and diagnostics ***
[2024-06-18 04:47:12]     "exeErrorCode": 0,
[2024-06-18 04:47:12]     "exeErrorDiag": "",
[2024-06-18 04:47:12]     "pilotErrorCode": 0,
[2024-06-18 04:47:12]     "pilotErrorDiag": "",
[2024-06-18 04:47:12]  *** Listing of results directory ***
[2024-06-18 04:47:12] insgesamt 879100
[2024-06-18 04:47:12] -rw-r--r-- 1 boinc boinc    469766 14. Jun 09:27 pilot3.tar.gz
[2024-06-18 04:47:12] -rwx------ 1 boinc boinc     32308 14. Jun 10:05 runpilot2-wrapper.sh
[2024-06-18 04:47:12] -rw-r--r-- 1 boinc boinc      5654 14. Jun 10:05 queuedata.json
[2024-06-18 04:47:12] -rw-r--r-- 1 boinc boinc       100 17. Jun 23:53 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-18 04:47:12] -rwxr-xr-x 1 boinc boinc      7986 17. Jun 23:53 run_atlas
[2024-06-18 04:47:12] -rw-r--r-- 1 boinc boinc       105 17. Jun 23:53 job.xml
[2024-06-18 04:47:12] -rw-r--r-- 1 boinc boinc      6703 17. Jun 23:53 init_data.xml
[2024-06-18 04:47:12] -rw-r--r-- 2 boinc boinc 542508978 17. Jun 23:53 EVNT.38776210._000869.pool.root.1
[2024-06-18 04:47:12] drwxrwx--x 2 boinc boinc      4096 17. Jun 23:53 shared
[2024-06-18 04:47:12] -rw-r--r-- 2 boinc boinc    482519 17. Jun 23:53 input.tar.gz
[2024-06-18 04:47:12] -rw-r--r-- 2 boinc boinc     17537 17. Jun 23:53 start_atlas.sh
[2024-06-18 04:47:12] -rw-r--r-- 1 boinc boinc         0 17. Jun 23:53 boinc_lockfile
[2024-06-18 04:47:12] -rw-r--r-- 1 boinc boinc      2647 17. Jun 23:53 pandaJob.out
[2024-06-18 04:47:12] -rw------- 1 boinc boinc       462 17. Jun 23:53 setup.sh.local
[2024-06-18 04:47:12] -rw------- 1 boinc boinc   1020925 17. Jun 23:53 agis_schedconf.cvmfs.json
[2024-06-18 04:47:12] -rw------- 1 boinc boinc   1316805 17. Jun 23:53 cric_ddmendpoints.json
[2024-06-18 04:47:12] drwx------ 4 boinc boinc      4096 17. Jun 23:53 pilot3
[2024-06-18 04:47:12] -rw------- 1 boinc boinc 349903085 18. Jun 04:45 HITS.38921013._033888.pool.root.1
[2024-06-18 04:47:12] -rw-r--r-- 1 boinc boinc       532 18. Jun 04:45 boinc_task_state.xml
[2024-06-18 04:47:12] -rw------- 1 boinc boinc      1021 18. Jun 04:45 memory_monitor_summary.json
[2024-06-18 04:47:12] -rw------- 1 boinc boinc         0 18. Jun 04:45 agis_ddmendpoints.agis.ALL.json
[2024-06-18 04:47:12] -rw------- 1 boinc boinc    409516 18. Jun 04:45 log.38921013._033888.job.log.tgz.1
[2024-06-18 04:47:12] -rw------- 1 boinc boinc        95 18. Jun 04:46 pilot_heartbeat.json
[2024-06-18 04:47:12] -rw------- 1 boinc boinc      7671 18. Jun 04:46 heartbeat.json
[2024-06-18 04:47:12] -rw-r--r-- 1 boinc boinc        29 18. Jun 04:47 wrapper_checkpoint.txt
[2024-06-18 04:47:12] -rw-r--r-- 1 boinc boinc      8192 18. Jun 04:47 boinc_mmap_file
[2024-06-18 04:47:12] -rw------- 1 boinc boinc      4470 18. Jun 04:47 pilotlog.txt
[2024-06-18 04:47:12] -rw------- 1 boinc boinc   1720027 18. Jun 04:47 log.38921013._033888.job.log.1
[2024-06-18 04:47:12] -rw------- 1 boinc boinc       357 18. Jun 04:47 output.list
[2024-06-18 04:47:12] -rw-r--r-- 1 boinc boinc       620 18. Jun 04:47 runtime_log
[2024-06-18 04:47:12] -rw------- 1 boinc boinc   2150400 18. Jun 04:47 result.tar.gz
[2024-06-18 04:47:12] -rw-r--r-- 1 boinc boinc     11317 18. Jun 04:47 runtime_log.err
[2024-06-18 04:47:12] -rw------- 1 boinc boinc       634 18. Jun 04:47 b5eLDmu6Gc5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmYlTKDmyIW9Zm.diag
[2024-06-18 04:47:12] -rw-r--r-- 1 boinc boinc     21246 18. Jun 04:47 stderr.txt
[2024-06-18 04:47:12] HITS file was successfully produced:
[2024-06-18 04:47:12] -rw------- 1 boinc boinc 349903085 18. Jun 04:45 shared/HITS.pool.root.1
[2024-06-18 04:47:12]  *** Contents of shared directory: ***
[2024-06-18 04:47:12] insgesamt 874100
[2024-06-18 04:47:12] -rw-r--r-- 2 boinc boinc 542508978 17. Jun 23:53 ATLAS.root_0
[2024-06-18 04:47:12] -rw-r--r-- 2 boinc boinc    482519 17. Jun 23:53 input.tar.gz
[2024-06-18 04:47:12] -rw-r--r-- 2 boinc boinc     17537 17. Jun 23:53 start_atlas.sh
[2024-06-18 04:47:12] -rw------- 1 boinc boinc 349903085 18. Jun 04:45 HITS.pool.root.1
[2024-06-18 04:47:12] -rw------- 1 boinc boinc   2150400 18. Jun 04:47 result.tar.gz
04:47:13 (183891): run_atlas exited; CPU time 102112.268361
04:47:13 (183891): called boinc_finish(0)

</stderr_txt>
]]>

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