Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:06:14 (49661): wrapper (7.7.26015): starting
09:06:14 (49661): wrapper: running run_atlas (--nthreads 8)
[2024-06-14 09:06:14] Arguments: --nthreads 8
[2024-06-14 09:06:14] Threads: 8
[2024-06-14 09:06:14] Checking for CVMFS
[2024-06-14 09:06:14] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-14 09:06:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-14 09:06:14] Running cvmfs_config stat atlas.cern.ch
[2024-06-14 09:06:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-14 09:06:14] 2.11.2.0 84859 3878 181316 133869 0 657 14911058 18432001 11121 130560 0 27392888 99.503 24591559 48744 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-06-14 09:06:14] CVMFS is ok
[2024-06-14 09:06:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-14 09:06:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-14 09:06:14] Further information can be found at the LHC@home message board.
[2024-06-14 09:06:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-14 09:06:14] Checking for apptainer binary...
[2024-06-14 09:06:14] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-14 09:06:14] Running /usr/bin/apptainer --version
[2024-06-14 09:06:14] apptainer version 1.3.1-1.el7
[2024-06-14 09:06:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-14 09:06:15] c-212-2.aglt2.org
[2024-06-14 09:06:15] apptainer works
[2024-06-14 09:06:15] Set ATHENA_PROC_NUMBER=8
[2024-06-14 09:06:15] Set ATHENA_CORE_NUMBER=8
[2024-06-14 09:06:15] Starting ATLAS job with PandaID=6230043510
[2024-06-14 09:06:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-14 15:53:49]  *** The last 200 lines of the pilot log: ***
[2024-06-14 15:53:49] 2024-06-14 19:53:29,161 | INFO     | monitor loop #1841: job 0:6230043510 is in state 'finished'
[2024-06-14 15:53:49] 2024-06-14 19:53:29,161 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-14 15:53:49] 2024-06-14 19:53:29,803 | INFO     | job 6230043510 has state=finished
[2024-06-14 15:53:49] 2024-06-14 19:53:29,803 | INFO     | preparing for final server update for job 6230043510 in state='finished'
[2024-06-14 15:53:49] 2024-06-14 19:53:29,804 | INFO     | this job has now completed (state=finished)
[2024-06-14 15:53:49] 2024-06-14 19:53:29,804 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-06-14 15:53:49] 2024-06-14 19:53:29,804 | INFO     | job 6230043510 has finished - writing final server update
[2024-06-14 15:53:49] 2024-06-14 19:53:29,804 | INFO     | total number of processed events: 400 (read)
[2024-06-14 15:53:49] 2024-06-14 19:53:29,808 | INFO     | executing command: lscpu
[2024-06-14 15:53:49] 2024-06-14 19:53:29,848 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-06-14 15:53:49] 2024-06-14 19:53:29,848 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-06-14 15:53:49] 2024-06-14 19:53:29,902 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-06-14 15:53:49] 2024-06-14 19:53:31,665 | INFO     | monitor loop #1842: job 0:6230043510 is in state 'finished'
[2024-06-14 15:53:49] 2024-06-14 19:53:31,666 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-14 15:53:49] 2024-06-14 19:53:33,786 | INFO     | CPU arch script returned: x86-64-v3
[2024-06-14 15:53:49] 2024-06-14 19:53:33,786 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6230043510/memory_monitor_summary.json (trf name=prmon)
[2024-06-14 15:53:49] 2024-06-14 19:53:33,787 | INFO     | extracted standard info from prmon json
[2024-06-14 15:53:49] 2024-06-14 19:53:33,787 | INFO     | extracted standard memory fields from prmon json
[2024-06-14 15:53:49] 2024-06-14 19:53:33,787 | WARNING  | GPU info not found in prmon json
[2024-06-14 15:53:49] 2024-06-14 19:53:33,788 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-14 15:53:49] 2024-06-14 19:53:33,788 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-14 15:53:49] 2024-06-14 19:53:33,794 | INFO     | fitting pss+swap vs Time
[2024-06-14 15:53:49] 2024-06-14 19:53:33,795 | INFO     | model: linear, x: [1718370408.0, 1718370469.0, 1718370530.0, 1718370591.0, 1718370652.0, 1718370713.0, 1718370774.0, 1718370835.0, 1718370896.0, 1718370957.0, 1718
[2024-06-14 15:53:49] 2024-06-14 19:53:33,795 | INFO     | sum of square deviations: 19845209300.0
[2024-06-14 15:53:49] 2024-06-14 19:53:33,798 | INFO     | sum of deviations: 774122375323.0
[2024-06-14 15:53:49] 2024-06-14 19:53:33,798 | INFO     | mean x: 1718382577.5
[2024-06-14 15:53:49] 2024-06-14 19:53:33,798 | INFO     | mean y: 2383129.0
[2024-06-14 15:53:49] 2024-06-14 19:53:33,798 | INFO     | -- intersect: -67028323501.438965
[2024-06-14 15:53:49] 2024-06-14 19:53:33,798 | INFO     | intersect: -67028323501.438965
[2024-06-14 15:53:49] 2024-06-14 19:53:33,798 | INFO     | chi2: 16.230455624325824
[2024-06-14 15:53:49] 2024-06-14 19:53:33,799 | INFO     | model: linear, x: [1718370408.0, 1718370469.0, 1718370530.0, 1718370591.0, 1718370652.0, 1718370713.0, 1718370774.0, 1718370835.0, 1718370896.0, 1718370957.0, 1718
[2024-06-14 15:53:49] 2024-06-14 19:53:33,799 | INFO     | sum of square deviations: 19110274590.0
[2024-06-14 15:53:49] 2024-06-14 19:53:33,802 | INFO     | sum of deviations: 762666204382.0
[2024-06-14 15:53:49] 2024-06-14 19:53:33,802 | INFO     | mean x: 1718382425.0
[2024-06-14 15:53:49] 2024-06-14 19:53:33,802 | INFO     | mean y: 2380752.0329113924
[2024-06-14 15:53:49] 2024-06-14 19:53:33,802 | INFO     | -- intersect: -68576026930.15031
[2024-06-14 15:53:49] 2024-06-14 19:53:33,802 | INFO     | intersect: -68576026930.15031
[2024-06-14 15:53:49] 2024-06-14 19:53:33,802 | INFO     | chi2: 16.203563949913573
[2024-06-14 15:53:49] 2024-06-14 19:53:33,803 | INFO     | current chi2=16.203563949913573 (change=0.16568650341489347 %)
[2024-06-14 15:53:49] 2024-06-14 19:53:33,803 | INFO     | right removable region: 394
[2024-06-14 15:53:49] 2024-06-14 19:53:33,803 | INFO     | model: linear, x: [1718370713.0, 1718370774.0, 1718370835.0, 1718370896.0, 1718370957.0, 1718371018.0, 1718371079.0, 1718371140.0, 1718371201.0, 1718371262.0, 1718
[2024-06-14 15:53:49] 2024-06-14 19:53:33,803 | INFO     | sum of square deviations: 19110274590.0
[2024-06-14 15:53:49] 2024-06-14 19:53:33,806 | INFO     | sum of deviations: 658179442790.9999
[2024-06-14 15:53:49] 2024-06-14 19:53:33,806 | INFO     | mean x: 1718382730.0
[2024-06-14 15:53:49] 2024-06-14 19:53:33,806 | INFO     | mean y: 2407160.02278481
[2024-06-14 15:53:49] 2024-06-14 19:53:33,806 | INFO     | -- intersect: -59180635051.4642
[2024-06-14 15:53:49] 2024-06-14 19:53:33,806 | INFO     | intersect: -59180635051.4642
[2024-06-14 15:53:49] 2024-06-14 19:53:33,807 | INFO     | chi2: 12.669006935156432
[2024-06-14 15:53:49] 2024-06-14 19:53:33,807 | INFO     | current chi2=12.669006935156432 (change=21.942998838748416 %)
[2024-06-14 15:53:49] 2024-06-14 19:53:33,807 | INFO     | left removable region: 10
[2024-06-14 15:53:49] 2024-06-14 19:53:33,807 | INFO     | model: linear, x: [1718371018.0, 1718371079.0, 1718371140.0, 1718371201.0, 1718371262.0, 1718371323.0, 1718371384.0, 1718371445.0, 1718371506.0, 1718371567.0, 1718
[2024-06-14 15:53:49] 2024-06-14 19:53:33,807 | INFO     | sum of square deviations: 17557761760.0
[2024-06-14 15:53:49] 2024-06-14 19:53:33,810 | INFO     | sum of deviations: 554113294774.5
[2024-06-14 15:53:49] 2024-06-14 19:53:33,810 | INFO     | mean x: 1718382699.5
[2024-06-14 15:53:49] 2024-06-14 19:53:33,810 | INFO     | mean y: 2424907.1796875
[2024-06-14 15:53:49] 2024-06-14 19:53:33,810 | INFO     | -- intersect: -54228787038.792435
[2024-06-14 15:53:49] 2024-06-14 19:53:33,810 | INFO     | intersect: -54228787038.792435
[2024-06-14 15:53:49] 2024-06-14 19:53:33,810 | INFO     | chi2: 10.565362485887457
[2024-06-14 15:53:49] 2024-06-14 19:53:33,811 | INFO     | -- intersect: -54228787038.792435
[2024-06-14 15:53:49] 2024-06-14 19:53:33,811 | INFO     | current memory leak: 31.56 B/s (using 384 data points, chi2=10.57)
[2024-06-14 15:53:49] 2024-06-14 19:53:33,811 | INFO     | ..............................
[2024-06-14 15:53:49] 2024-06-14 19:53:33,811 | INFO     | . Timing measurements:
[2024-06-14 15:53:49] 2024-06-14 19:53:33,811 | INFO     | . get job = 0 s
[2024-06-14 15:53:49] 2024-06-14 19:53:33,811 | INFO     | . initial setup = 2 s
[2024-06-14 15:53:49] 2024-06-14 19:53:33,811 | INFO     | . payload setup = 4 s
[2024-06-14 15:53:49] 2024-06-14 19:53:33,811 | INFO     | . stage-in = 0 s
[2024-06-14 15:53:49] 2024-06-14 19:53:33,812 | INFO     | . payload execution = 24396 s
[2024-06-14 15:53:49] 2024-06-14 19:53:33,812 | INFO     | . stage-out = 1 s
[2024-06-14 15:53:49] 2024-06-14 19:53:33,812 | INFO     | . log creation = 0 s
[2024-06-14 15:53:49] 2024-06-14 19:53:33,812 | INFO     | ..............................
[2024-06-14 15:53:49] 2024-06-14 19:53:34,272 | INFO     | 
[2024-06-14 15:53:49] 2024-06-14 19:53:34,272 | INFO     | job summary report
[2024-06-14 15:53:49] 2024-06-14 19:53:34,272 | INFO     | --------------------------------------------------
[2024-06-14 15:53:49] 2024-06-14 19:53:34,272 | INFO     | PanDA job id: 6230043510
[2024-06-14 15:53:49] 2024-06-14 19:53:34,272 | INFO     | task id: 38921013
[2024-06-14 15:53:49] 2024-06-14 19:53:34,272 | INFO     | errors: (none)
[2024-06-14 15:53:49] 2024-06-14 19:53:34,272 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-14 15:53:49] 2024-06-14 19:53:34,272 | INFO     | pilot state: finished 
[2024-06-14 15:53:49] 2024-06-14 19:53:34,272 | INFO     | transexitcode: 0
[2024-06-14 15:53:49] 2024-06-14 19:53:34,272 | INFO     | exeerrorcode: 0
[2024-06-14 15:53:49] 2024-06-14 19:53:34,273 | INFO     | exeerrordiag: 
[2024-06-14 15:53:49] 2024-06-14 19:53:34,273 | INFO     | exitcode: 0
[2024-06-14 15:53:49] 2024-06-14 19:53:34,273 | INFO     | exitmsg: OK
[2024-06-14 15:53:49] 2024-06-14 19:53:34,273 | INFO     | cpuconsumptiontime: 137788 s
[2024-06-14 15:53:49] 2024-06-14 19:53:34,273 | INFO     | nevents: 400
[2024-06-14 15:53:49] 2024-06-14 19:53:34,273 | INFO     | neventsw: 0
[2024-06-14 15:53:49] 2024-06-14 19:53:34,273 | INFO     | pid: 67835
[2024-06-14 15:53:49] 2024-06-14 19:53:34,273 | INFO     | pgrp: 67835
[2024-06-14 15:53:49] 2024-06-14 19:53:34,273 | INFO     | corecount: 8
[2024-06-14 15:53:49] 2024-06-14 19:53:34,273 | INFO     | event service: False
[2024-06-14 15:53:49] 2024-06-14 19:53:34,273 | INFO     | sizes: {0: 2378911, 1: 2379110, 5: 2379316, 11: 2379372, 24404: 2414445, 24406: 2423405, 24407: 2423589, 24413: 2423759}
[2024-06-14 15:53:49] 2024-06-14 19:53:34,273 | INFO     | --------------------------------------------------
[2024-06-14 15:53:49] 2024-06-14 19:53:34,273 | INFO     | 
[2024-06-14 15:53:49] 2024-06-14 19:53:34,273 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2024-06-14 15:53:49] 2024-06-14 19:53:34,294 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-14 15:53:49] 2024-06-14 19:53:34,294 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-14 15:53:49] 2024-06-14 19:53:34,294 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-14 15:53:49] 2024-06-14 19:53:34,294 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-14 15:53:49] 2024-06-14 19:53:34,294 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-14 15:53:49] 2024-06-14 19:53:34,295 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-14 15:53:49] 2024-06-14 19:53:34,295 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-14 15:53:49] 2024-06-14 19:53:34,295 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-14 15:53:49] 2024-06-14 19:53:34,295 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-14 15:53:49] 2024-06-14 19:53:34,295 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-14 15:53:49] 2024-06-14 19:53:34,295 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-14 15:53:49] 2024-06-14 19:53:34,295 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-14 15:53:49] 2024-06-14 19:53:34,295 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-14 15:53:49] 2024-06-14 19:53:34,295 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-14 15:53:49] 2024-06-14 19:53:34,295 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-14 15:53:49] 2024-06-14 19:53:34,295 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-14 15:53:49] 2024-06-14 19:53:34,295 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-14 15:53:49] 2024-06-14 19:53:34,295 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-14 15:53:49] 2024-06-14 19:53:34,295 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-14 15:53:49] 2024-06-14 19:53:34,295 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-14 15:53:49] 2024-06-14 19:53:34,295 | INFO     | job 6230043510 has completed (purged errors)
[2024-06-14 15:53:49] 2024-06-14 19:53:34,296 | INFO     | overall cleanup function is called
[2024-06-14 15:53:49] 2024-06-14 19:53:35,303 | INFO     | --- collectZombieJob: --- 10, [67835]
[2024-06-14 15:53:49] 2024-06-14 19:53:35,304 | INFO     | zombie collector waiting for pid 67835
[2024-06-14 15:53:49] 2024-06-14 19:53:35,304 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-14 15:53:49] 2024-06-14 19:53:36,309 | INFO     | collected zombie processes
[2024-06-14 15:53:49] 2024-06-14 19:53:36,309 | INFO     | will now attempt to kill all subprocesses of pid=67835
[2024-06-14 15:53:49] 2024-06-14 19:53:36,431 | INFO     | process IDs to be killed: [67835] (in reverse order)
[2024-06-14 15:53:49] 2024-06-14 19:53:36,537 | WARNING  | found no corresponding commands to process id(s)
[2024-06-14 15:53:49] 2024-06-14 19:53:36,537 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-14 15:53:49] 2024-06-14 19:53:36,549 | INFO     | did not find any defunct processes belonging to 67835
[2024-06-14 15:53:49] 2024-06-14 19:53:36,556 | INFO     | did not find any defunct processes belonging to 67835
[2024-06-14 15:53:49] 2024-06-14 19:53:36,556 | INFO     | ready for new job
[2024-06-14 15:53:49] 2024-06-14 19:53:36,556 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-14 15:53:49] 2024-06-14 19:53:36,559 | INFO     | *************************************
[2024-06-14 15:53:49] 2024-06-14 19:53:36,559 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-14 15:53:49] 2024-06-14 19:53:36,559 | INFO     | *************************************
[2024-06-14 15:53:49] 2024-06-14 19:53:36,559 | INFO     | 
[2024-06-14 15:53:49] 2024-06-14 19:53:36,563 | INFO     | architecture information:
[2024-06-14 15:53:49] 2024-06-14 19:53:36,563 | INFO     | executing command: cat /etc/os-release
[2024-06-14 15:53:49] 2024-06-14 19:53:36,580 | INFO     | cat /etc/os-release:
[2024-06-14 15:53:49] NAME="CentOS Linux"
[2024-06-14 15:53:49] VERSION="7 (Core)"
[2024-06-14 15:53:49] ID="centos"
[2024-06-14 15:53:49] ID_LIKE="rhel fedora"
[2024-06-14 15:53:49] VERSION_ID="7"
[2024-06-14 15:53:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-14 15:53:49] ANSI_COLOR="0;31"
[2024-06-14 15:53:49] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-14 15:53:49] HOME_URL="https://www.centos.org/"
[2024-06-14 15:53:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-14 15:53:49] 
[2024-06-14 15:53:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-14 15:53:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-14 15:53:49] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-14 15:53:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-14 15:53:49] 
[2024-06-14 15:53:49] 2024-06-14 19:53:36,580 | INFO     | *************************************
[2024-06-14 15:53:49] 2024-06-14 19:53:37,082 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2024-06-14 15:53:49] 2024-06-14 19:53:37,103 | INFO     | sufficient remaining disk space (99888398336 B)
[2024-06-14 15:53:49] 2024-06-14 19:53:37,103 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-14 15:53:49] 2024-06-14 19:53:37,103 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-14 15:53:49] 2024-06-14 19:53:37,201 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-14 15:53:49] 2024-06-14 19:53:37,398 | INFO     | all payload control threads have been joined
[2024-06-14 15:53:49] 2024-06-14 19:53:37,501 | INFO     | found 0 job(s) in 20 queues
[2024-06-14 15:53:49] 2024-06-14 19:53:37,502 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-14 15:53:49] 2024-06-14 19:53:37,502 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-14 15:53:49] 2024-06-14 19:53:37,678 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-14 15:53:49] 2024-06-14 19:53:37,678 | INFO     | aborting loop
[2024-06-14 15:53:49] 2024-06-14 19:53:37,759 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-14 15:53:49] 2024-06-14 19:53:37,905 | INFO     | all data control threads have been joined
[2024-06-14 15:53:49] 2024-06-14 19:53:38,109 | INFO     | [job] retrieve thread has finished
[2024-06-14 15:53:49] 2024-06-14 19:53:38,200 | INFO     | [payload] validate_post thread has finished
[2024-06-14 15:53:49] 2024-06-14 19:53:38,203 | INFO     | [payload] failed_post thread has finished
[2024-06-14 15:53:49] 2024-06-14 19:53:38,233 | INFO     | [data] copytool_in thread has finished
[2024-06-14 15:53:49] 2024-06-14 19:53:38,300 | INFO     | all job control threads have been joined
[2024-06-14 15:53:49] 2024-06-14 19:53:38,403 | INFO     | [payload] control thread has finished
[2024-06-14 15:53:49] 2024-06-14 19:53:38,684 | INFO     | [job] job monitor thread has finished
[2024-06-14 15:53:49] 2024-06-14 19:53:38,833 | INFO     | [payload] execute_payloads thread has finished
[2024-06-14 15:53:49] 2024-06-14 19:53:38,902 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-14 15:53:49] 2024-06-14 19:53:38,910 | INFO     | [data] control thread has finished
[2024-06-14 15:53:49] 2024-06-14 19:53:39,077 | INFO     | [payload] validate_pre thread has finished
[2024-06-14 15:53:49] 2024-06-14 19:53:39,165 | INFO     | [job] create_data_payload thread has finished
[2024-06-14 15:53:49] 2024-06-14 19:53:39,204 | INFO     | [data] copytool_out thread has finished
[2024-06-14 15:53:49] 2024-06-14 19:53:39,269 | INFO     | [job] validate thread has finished
[2024-06-14 15:53:49] 2024-06-14 19:53:39,305 | INFO     | [job] control thread has finished
[2024-06-14 15:53:49] 2024-06-14 19:53:39,521 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-14 15:53:49] 2024-06-14 19:53:39,908 | INFO     | [job] queue monitor thread has finished
[2024-06-14 15:53:49] 2024-06-14 19:53:41,769 | INFO     | [data] queue_monitor thread has finished
[2024-06-14 15:53:49] 2024-06-14 19:53:43,770 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140181422184256)>', '<ExcThread(monitor, started 140180971296512)>']
[2024-06-14 15:53:49] 2024-06-14 19:53:44,535 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-14 15:53:49] 2024-06-14 19:53:44,535 | INFO     | [monitor] control thread has ended
[2024-06-14 15:53:49] 2024-06-14 19:53:48,795 | INFO     | all workflow threads have been joined
[2024-06-14 15:53:49] 2024-06-14 19:53:48,795 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-14 15:53:49] 2024-06-14 19:53:48,796 | INFO     | traces error code: 0
[2024-06-14 15:53:49] 2024-06-14 19:53:48,796 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-14 15:53:49] 2024-06-14 19:53:48,918 [wrapper] ==== pilot stdout END ====
[2024-06-14 15:53:49] 2024-06-14 19:53:48,921 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-14 15:53:49] 2024-06-14 19:53:48,923 [wrapper] pilotpid: 54795
[2024-06-14 15:53:49] 2024-06-14 19:53:48,925 [wrapper] Pilot exit status: 0
[2024-06-14 15:53:49] 2024-06-14 19:53:48,933 [wrapper] pandaids: 6230043510
[2024-06-14 15:53:49] 2024-06-14 19:53:48,990 [wrapper] cleanup supervisor_pilot 67853 54796
[2024-06-14 15:53:49] 2024-06-14 19:53:48,992 [wrapper] Test setup, not cleaning
[2024-06-14 15:53:49] 2024-06-14 19:53:48,994 [wrapper] ==== wrapper stdout END ====
[2024-06-14 15:53:49] 2024-06-14 19:53:48,995 [wrapper] ==== wrapper stderr END ====
[2024-06-14 15:53:49] 2024-06-14 19:53:48,998 [wrapper] apfmon messages muted
[2024-06-14 15:53:49]  *** Error codes and diagnostics ***
[2024-06-14 15:53:49]     "exeErrorCode": 0,
[2024-06-14 15:53:49]     "exeErrorDiag": "",
[2024-06-14 15:53:49]     "pilotErrorCode": 0,
[2024-06-14 15:53:49]     "pilotErrorDiag": "",
[2024-06-14 15:53:49]  *** Listing of results directory ***
[2024-06-14 15:53:49] total 881116
[2024-06-14 15:53:49] -rw-r--r-- 1 boincer umatlas    469766 Jun 14 02:57 pilot3.tar.gz
[2024-06-14 15:53:49] -rw-r--r-- 1 boincer umatlas      5654 Jun 14 03:06 queuedata.json
[2024-06-14 15:53:49] -rwx------ 1 boincer umatlas     32308 Jun 14 03:06 runpilot2-wrapper.sh
[2024-06-14 15:53:49] -rw-r--r-- 1 boincer umatlas       100 Jun 14 09:05 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-14 15:53:49] -rwxr-xr-x 1 boincer umatlas      7986 Jun 14 09:05 run_atlas
[2024-06-14 15:53:49] -rw-r--r-- 1 boincer umatlas       105 Jun 14 09:05 job.xml
[2024-06-14 15:53:49] -rw-r--r-- 2 boincer umatlas 544966789 Jun 14 09:06 EVNT.38776210._000862.pool.root.1
[2024-06-14 15:53:49] -rw-r--r-- 2 boincer umatlas     17537 Jun 14 09:06 start_atlas.sh
[2024-06-14 15:53:49] drwxrwx--x 2 boincer umatlas      4096 Jun 14 09:06 shared
[2024-06-14 15:53:49] -rw-r--r-- 2 boincer umatlas    482515 Jun 14 09:06 input.tar.gz
[2024-06-14 15:53:49] -rw-r--r-- 1 boincer umatlas         0 Jun 14 09:06 boinc_lockfile
[2024-06-14 15:53:49] -rw-r--r-- 1 boincer umatlas      2647 Jun 14 09:06 pandaJob.out
[2024-06-14 15:53:49] -rw------- 1 boincer umatlas       467 Jun 14 09:06 setup.sh.local
[2024-06-14 15:53:49] -rw------- 1 boincer umatlas   1020548 Jun 14 09:06 agis_schedconf.cvmfs.json
[2024-06-14 15:53:49] -rw------- 1 boincer umatlas   1316805 Jun 14 09:06 cric_ddmendpoints.json
[2024-06-14 15:53:49] drwx------ 4 boincer umatlas      4096 Jun 14 09:06 pilot3
[2024-06-14 15:53:49] -rw-r--r-- 1 boincer umatlas      6388 Jun 14 15:49 init_data.xml
[2024-06-14 15:53:49] -rw------- 1 boincer umatlas        95 Jun 14 15:52 pilot_heartbeat.json
[2024-06-14 15:53:49] -rw------- 1 boincer umatlas 348048423 Jun 14 15:52 HITS.38921013._033667.pool.root.1
[2024-06-14 15:53:49] -rw-r--r-- 1 boincer umatlas       532 Jun 14 15:52 boinc_task_state.xml
[2024-06-14 15:53:49] -rw------- 1 boincer umatlas      1082 Jun 14 15:53 memory_monitor_summary.json
[2024-06-14 15:53:49] -rw------- 1 boincer umatlas         0 Jun 14 15:53 agis_ddmendpoints.agis.ALL.json
[2024-06-14 15:53:49] -rw------- 1 boincer umatlas    517904 Jun 14 15:53 log.38921013._033667.job.log.tgz.1
[2024-06-14 15:53:49] -rw------- 1 boincer umatlas      7752 Jun 14 15:53 heartbeat.json
[2024-06-14 15:53:49] -rw-r--r-- 1 boincer umatlas        29 Jun 14 15:53 wrapper_checkpoint.txt
[2024-06-14 15:53:49] -rw-r--r-- 1 boincer umatlas      8192 Jun 14 15:53 boinc_mmap_file
[2024-06-14 15:53:49] -rw------- 1 boincer umatlas      4211 Jun 14 15:53 pilotlog.txt
[2024-06-14 15:53:49] -rw------- 1 boincer umatlas   2341079 Jun 14 15:53 log.38921013._033667.job.log.1
[2024-06-14 15:53:49] -rw------- 1 boincer umatlas       357 Jun 14 15:53 output.list
[2024-06-14 15:53:49] -rw-r--r-- 1 boincer umatlas       620 Jun 14 15:53 runtime_log
[2024-06-14 15:53:49] -rw------- 1 boincer umatlas   2877440 Jun 14 15:53 result.tar.gz
[2024-06-14 15:53:49] -rw-r--r-- 1 boincer umatlas     11400 Jun 14 15:53 runtime_log.err
[2024-06-14 15:53:49] -rw------- 1 boincer umatlas       651 Jun 14 15:53 ksdLDmICGc5n7Olcko1bjSoqABFKDmABFKDmOtvXDmpkoKDm6T0DSo.diag
[2024-06-14 15:53:49] -rw-r--r-- 1 boincer umatlas     21741 Jun 14 15:53 stderr.txt
[2024-06-14 15:53:49] HITS file was successfully produced:
[2024-06-14 15:53:49] -rw------- 1 boincer umatlas 348048423 Jun 14 15:52 shared/HITS.pool.root.1
[2024-06-14 15:53:49]  *** Contents of shared directory: ***
[2024-06-14 15:53:49] total 875400
[2024-06-14 15:53:49] -rw-r--r-- 2 boincer umatlas 544966789 Jun 14 09:06 ATLAS.root_0
[2024-06-14 15:53:49] -rw-r--r-- 2 boincer umatlas     17537 Jun 14 09:06 start_atlas.sh
[2024-06-14 15:53:49] -rw-r--r-- 2 boincer umatlas    482515 Jun 14 09:06 input.tar.gz
[2024-06-14 15:53:49] -rw------- 1 boincer umatlas 348048423 Jun 14 15:52 HITS.pool.root.1
[2024-06-14 15:53:49] -rw------- 1 boincer umatlas   2877440 Jun 14 15:53 result.tar.gz
15:53:50 (49661): run_atlas exited; CPU time 136075.026722
15:53:50 (49661): called boinc_finish(0)

</stderr_txt>
]]>

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