Stderr output

<core_client_version>7.16.5</core_client_version>
<![CDATA[
<stderr_txt>
2024-06-17 04:41:55 (16456): Detected: vboxwrapper 26206
2024-06-17 04:41:55 (16456): Detected: BOINC client v7.16.5
2024-06-17 04:41:56 (16456): Detected: VirtualBox VboxManage Interface (Version: 5.2.44)
2024-06-17 04:41:56 (16456): Successfully copied 'init_data.xml' to the shared directory.
2024-06-17 04:41:56 (16456): Create VM. (boinc_ee9aaab6a9179511, slot#2)
2024-06-17 04:41:57 (16456): Setting Memory Size for VM. (4400MB)
2024-06-17 04:41:57 (16456): Setting CPU Count for VM. (4)
2024-06-17 04:41:57 (16456): Setting Chipset Options for VM.
2024-06-17 04:41:58 (16456): Setting Graphics Controller Options for VM.
2024-06-17 04:41:58 (16456): Setting Boot Options for VM.
2024-06-17 04:41:58 (16456): Setting Network Configuration for NAT.
2024-06-17 04:41:58 (16456): Enabling VM Network Access.
2024-06-17 04:41:59 (16456): Disabling USB Support for VM.
2024-06-17 04:41:59 (16456): Disabling COM Port Support for VM.
2024-06-17 04:41:59 (16456): Disabling LPT Port Support for VM.
2024-06-17 04:41:59 (16456): Disabling Audio Support for VM.
2024-06-17 04:42:00 (16456): Disabling Clipboard Support for VM.
2024-06-17 04:42:00 (16456): Disabling Drag and Drop Support for VM.
2024-06-17 04:42:00 (16456): Adding storage controller(s) to VM.
2024-06-17 04:42:00 (16456): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-06-17 04:42:01 (16456): Adding VirtualBox Guest Additions to VM.
2024-06-17 04:42:01 (16456): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-06-17 04:42:01 (16456): forwarding host port 61548 to guest port 80
2024-06-17 04:42:02 (16456): Enabling remote desktop for VM.
2024-06-17 04:42:02 (16456): Enabling shared directory for VM.
2024-06-17 04:42:03 (16456): Starting VM using VBoxManage interface. (boinc_ee9aaab6a9179511, slot#2)
2024-06-17 04:42:07 (16456): Successfully started VM. (PID = '16872')
2024-06-17 04:42:07 (16456): Reporting VM Process ID to BOINC.
2024-06-17 04:42:07 (16456): Guest Log: BIOS: VirtualBox 5.2.44
2024-06-17 04:42:07 (16456): Guest Log: CPUID EDX: 0x178bfbff
2024-06-17 04:42:07 (16456): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-06-17 04:42:07 (16456): VM state change detected. (old = 'poweredoff', new = 'running')
2024-06-17 04:42:07 (16456): Detected: Web Application Enabled (http://localhost:61548)
2024-06-17 04:42:07 (16456): Detected: Remote Desktop Enabled (localhost:61549)
2024-06-17 04:42:07 (16456): Preference change detected
2024-06-17 04:42:07 (16456): Setting CPU throttle for VM. (100%)
2024-06-17 04:42:08 (16456): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2024-06-17 04:42:09 (16456): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-06-17 04:42:09 (16456): Guest Log: BIOS: Booting from Hard Disk...
2024-06-17 04:42:12 (16456): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-06-17 04:42:12 (16456): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-06-17 04:42:12 (16456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-06-17 04:42:12 (16456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-06-17 04:42:12 (16456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-06-17 04:42:12 (16456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-06-17 04:42:12 (16456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-06-17 04:42:12 (16456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-06-17 04:42:12 (16456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-06-17 04:42:12 (16456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-06-17 04:42:12 (16456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-06-17 04:42:12 (16456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-06-17 04:42:12 (16456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-06-17 04:42:12 (16456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-06-17 04:42:12 (16456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-06-17 04:42:12 (16456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-06-17 04:42:12 (16456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-06-17 04:42:12 (16456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-06-17 04:42:12 (16456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-06-17 04:42:12 (16456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-06-17 04:42:12 (16456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-06-17 04:42:12 (16456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-06-17 04:42:12 (16456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-06-17 04:42:12 (16456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-06-17 04:42:12 (16456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-06-17 04:42:12 (16456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-06-17 04:42:12 (16456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-06-17 04:42:12 (16456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-06-17 04:42:12 (16456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-06-17 04:42:12 (16456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-06-17 04:42:12 (16456): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-06-17 04:42:12 (16456): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-06-17 04:42:17 (16456): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-06-17 04:42:17 (16456): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-06-17 04:42:24 (16456): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-06-17 04:42:24 (16456): Guest Log: 00:00:00.000181 main     Log opened 2024-06-17T04:42:21.968011000Z
2024-06-17 04:42:24 (16456): Guest Log: 00:00:00.000302 main     OS Product: Linux
2024-06-17 04:42:24 (16456): Guest Log: 00:00:00.000381 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-06-17 04:42:24 (16456): Guest Log: 00:00:00.000425 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-06-17 04:42:24 (16456): Guest Log: 00:00:00.000455 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-06-17 04:42:24 (16456): Guest Log: 00:00:00.000455 main     Process ID: 1301
2024-06-17 04:42:24 (16456): Guest Log: 00:00:00.000456 main     Package type: LINUX_64BITS_GENERIC
2024-06-17 04:42:24 (16456): Guest Log: 00:00:00.001399 main     5.2.32 r132073 started. Verbose level = 0
2024-06-17 04:42:24 (16456): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-06-17 04:42:24 (16456): Guest Log: [INFO] Mounting shared directory
2024-06-17 04:42:24 (16456): Guest Log: [INFO] Checking for init_data.xml
2024-06-17 04:42:27 (16456): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-06-17 04:42:27 (16456): Guest Log: [INFO] Detected branch: prod
2024-06-17 04:42:28 (16456): Guest Log: This is the prod version of the ATLAS job wrapper
2024-06-17 04:42:28 (16456): Guest Log: Copying input files
2024-06-17 04:42:32 (16456): Guest Log: Copied input files into RunAtlas.
2024-06-17 04:42:32 (16456): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-06-17 04:42:32 (16456): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-06-17 04:42:32 (16456): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-06-17 04:42:32 (16456): Guest Log: Further information can be found at the LHC@home message board.
2024-06-17 04:42:34 (16456): Guest Log: 00:00:10.003505 timesync vgsvcTimeSyncWorker: Radical guest time change: -10 787 928 862 000ns (GuestNow=1 718 588 554 042 215 000 ns GuestLast=1 718 599 341 971 077 000 ns fSetTimeLastLoop=true )
2024-06-17 04:42:41 (16456): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-06-17 04:42:41 (16456): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-06-17 04:42:41 (16456): Guest Log: 2.6.3.0 1576 0 30148 133957 3 1 3117205 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2024-06-17 04:42:42 (16456): Guest Log: copied the webapp to /var/www
2024-06-17 04:42:42 (16456): Guest Log: ATHENA_PROC_NUMBER=4
2024-06-17 04:42:42 (16456): Guest Log: ATHENA_CORE_NUMBER=4
2024-06-17 04:42:42 (16456): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-06-17 04:42:42 (16456): Guest Log:  *** Starting ATLAS job. (PandaID=6230043435 taskID=38921013) ***
2024-06-17 06:22:11 (16456): Status Report: Elapsed Time: '6000.000000'
2024-06-17 06:22:11 (16456): Status Report: CPU Time: '18386.125000'
2024-06-17 08:02:15 (16456): Status Report: Elapsed Time: '12000.000000'
2024-06-17 08:02:15 (16456): Status Report: CPU Time: '41013.406250'
2024-06-17 09:42:18 (16456): Status Report: Elapsed Time: '18000.000000'
2024-06-17 09:42:18 (16456): Status Report: CPU Time: '64523.953125'
2024-06-17 11:22:22 (16456): Status Report: Elapsed Time: '24000.000000'
2024-06-17 11:22:22 (16456): Status Report: CPU Time: '88454.828125'
2024-06-17 13:02:26 (16456): Status Report: Elapsed Time: '30000.000000'
2024-06-17 13:02:26 (16456): Status Report: CPU Time: '112380.890625'
2024-06-17 14:42:29 (16456): Status Report: Elapsed Time: '36000.000000'
2024-06-17 14:42:29 (16456): Status Report: CPU Time: '136308.687500'
2024-06-17 16:22:33 (16456): Status Report: Elapsed Time: '42000.000000'
2024-06-17 16:22:33 (16456): Status Report: CPU Time: '160237.812500'
2024-06-17 18:02:36 (16456): Status Report: Elapsed Time: '48000.000000'
2024-06-17 18:02:36 (16456): Status Report: CPU Time: '183922.921875'
2024-06-17 19:16:32 (16456): Guest Log:  *** Job finished ***
2024-06-17 19:16:32 (16456): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-06-17 19:16:32 (16456): Guest Log: 2024-06-17 16:16:18,244 | INFO     | [data] copytool_out thread has finished
2024-06-17 19:16:32 (16456): Guest Log: 2024-06-17 16:16:18,351 | INFO     | [job] queue monitor thread has finished
2024-06-17 19:16:32 (16456): Guest Log: 2024-06-17 16:16:22,079 | INFO     | [data] queue_monitor thread has finished
2024-06-17 19:16:32 (16456): Guest Log: 2024-06-17 16:16:24,068 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140199009728320)>', '<ExcThread(monitor, started 140198159558400)>']
2024-06-17 19:16:32 (16456): Guest Log: 2024-06-17 16:16:24,154 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-06-17 19:16:32 (16456): Guest Log: 2024-06-17 16:16:24,154 | INFO     | [monitor] control thread has ended
2024-06-17 19:16:32 (16456): Guest Log: 2024-06-17 16:16:29,071 | INFO     | all workflow threads have been joined
2024-06-17 19:16:32 (16456): Guest Log: 2024-06-17 16:16:29,071 | INFO     | end of generic workflow (traces error code: 0)
2024-06-17 19:16:32 (16456): Guest Log: 2024-06-17 16:16:29,071 | INFO     | traces error code: 0
2024-06-17 19:16:32 (16456): Guest Log: 2024-06-17 16:16:29,071 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-06-17 19:16:32 (16456): Guest Log: 2024-06-17 16:16:29,181 [wrapper] ==== pilot stdout END ====
2024-06-17 19:16:32 (16456): Guest Log: 2024-06-17 16:16:29,187 [wrapper] ==== wrapper stdout RESUME ====
2024-06-17 19:16:32 (16456): Guest Log: 2024-06-17 16:16:29,193 [wrapper] pilotpid: 6458
2024-06-17 19:16:32 (16456): Guest Log: 2024-06-17 16:16:29,199 [wrapper] Pilot exit status: 0
2024-06-17 19:16:32 (16456): Guest Log: 2024-06-17 16:16:29,326 [wrapper] pandaids: 6230043435
2024-06-17 19:16:32 (16456): Guest Log: 2024-06-17 16:16:29,361 [wrapper] cleanup supervisor_pilot 10831 6459
2024-06-17 19:16:32 (16456): Guest Log: 2024-06-17 16:16:29,366 [wrapper] Test setup, not cleaning
2024-06-17 19:16:32 (16456): Guest Log: 2024-06-17 16:16:29,372 [wrapper] ==== wrapper stdout END ====
2024-06-17 19:16:32 (16456): Guest Log: 2024-06-17 16:16:29,378 [wrapper] ==== wrapper stderr END ====
2024-06-17 19:16:32 (16456): Guest Log: 2024-06-17 16:16:29,390 [wrapper] apfmon messages muted
2024-06-17 19:16:32 (16456): Guest Log:  *** Error codes and diagnostics ***
2024-06-17 19:16:32 (16456): Guest Log:     "exeErrorCode": 0,
2024-06-17 19:16:32 (16456): Guest Log:     "exeErrorDiag": "",
2024-06-17 19:16:32 (16456): Guest Log:     "pilotErrorCode": 0,
2024-06-17 19:16:32 (16456): Guest Log:     "pilotErrorDiag": "",
2024-06-17 19:16:32 (16456): Guest Log:  *** Listing of results directory ***
2024-06-17 19:16:32 (16456): Guest Log: total 351456
2024-06-17 19:16:32 (16456): Guest Log: -rw-r--r--. 1 atlas atlas    469766 Jun 14 06:46 pilot3.tar.gz
2024-06-17 19:16:32 (16456): Guest Log: -rw-r--r--. 1 atlas atlas      5654 Jun 14 06:50 queuedata.json
2024-06-17 19:16:32 (16456): Guest Log: -rwx------. 1 atlas atlas     32308 Jun 14 06:52 runpilot2-wrapper.sh
2024-06-17 19:16:32 (16456): Guest Log: -rwxr-xr-x. 1 atlas atlas      8879 Jun 17 01:42 init_data.xml
2024-06-17 19:16:32 (16456): Guest Log: -rwxr-xr-x. 1 atlas atlas    482529 Jun 17 01:42 input.tar.gz
2024-06-17 19:16:32 (16456): Guest Log: -rwxr-xr-x. 1 atlas atlas     17537 Jun 17 01:42 start_atlas.sh
2024-06-17 19:16:32 (16456): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun 17 01:42 EVNT.38776210._000860.pool.root.1 -> /data/./ATLAS.root_0
2024-06-17 19:16:32 (16456): Guest Log: -rw-r--r--. 1 atlas atlas      2647 Jun 17 01:42 pandaJob.out
2024-06-17 19:16:32 (16456): Guest Log: -rw-------. 1 atlas atlas       424 Jun 17 01:42 setup.sh.local
2024-06-17 19:16:32 (16456): Guest Log: -rw-------. 1 atlas atlas   1019126 Jun 17 01:44 agis_schedconf.cvmfs.json
2024-06-17 19:16:32 (16456): Guest Log: -rw-------. 1 atlas atlas   1316805 Jun 17 01:44 cric_ddmendpoints.json
2024-06-17 19:16:32 (16456): Guest Log: drwx------. 4 atlas atlas      4096 Jun 17 01:44 pilot3
2024-06-17 19:16:32 (16456): Guest Log: -rw-------. 1 atlas atlas 342934105 Jun 17 16:15 HITS.38921013._033611.pool.root.1
2024-06-17 19:16:32 (16456): Guest Log: -rw-------. 1 atlas atlas        95 Jun 17 16:15 pilot_heartbeat.json
2024-06-17 19:16:32 (16456): Guest Log: -rw-------. 1 atlas atlas      1030 Jun 17 16:15 memory_monitor_summary.json
2024-06-17 19:16:32 (16456): Guest Log: -rw-------. 1 atlas atlas         0 Jun 17 16:15 agis_ddmendpoints.agis.ALL.json
2024-06-17 19:16:32 (16456): Guest Log: -rw-------. 1 atlas atlas    716628 Jun 17 16:15 log.38921013._033611.job.log.tgz.1
2024-06-17 19:16:32 (16456): Guest Log: -rw-------. 1 atlas atlas      7746 Jun 17 16:16 heartbeat.json
2024-06-17 19:16:32 (16456): Guest Log: -rw-------. 1 atlas atlas      4580 Jun 17 16:16 pilotlog.txt
2024-06-17 19:16:32 (16456): Guest Log: -rw-------. 1 atlas atlas   6029734 Jun 17 16:16 log.38921013._033611.job.log.1
2024-06-17 19:16:32 (16456): Guest Log: -rw-------. 1 atlas atlas       357 Jun 17 16:16 output.list
2024-06-17 19:16:32 (16456): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun 17 16:16 runtime_log
2024-06-17 19:16:32 (16456): Guest Log: -rw-------. 1 atlas atlas   6768640 Jun 17 16:16 result.tar.gz
2024-06-17 19:16:32 (16456): Guest Log: -rw-r--r--. 1 atlas atlas     10967 Jun 17 16:16 runtime_log.err
2024-06-17 19:16:32 (16456): Guest Log: -rw-------. 1 atlas atlas       663 Jun 17 16:16 ONVMDmCyFc5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDm0jeKDmYYQd1m.diag
2024-06-17 19:16:32 (16456): Guest Log: Looking for outputfile HITS.38921013._033611.pool.root.1
2024-06-17 19:16:32 (16456): Guest Log: HITS file was successfully produced
2024-06-17 19:16:32 (16456): Guest Log: -rw-------. 1 atlas atlas 342934105 Jun 17 16:15 /home/atlas/RunAtlas/HITS.38921013._033611.pool.root.1
2024-06-17 19:16:35 (16456): Guest Log: Successfully finished the ATLAS job!
2024-06-17 19:16:35 (16456): Guest Log: Copying the results back to the shared directory!
2024-06-17 19:16:35 (16456): Guest Log:  *** Contents of shared directory: ***
2024-06-17 19:16:35 (16456): Guest Log: total 869664
2024-06-17 19:16:35 (16456): Guest Log: -rwxrwxrwx. 1 root root 540310463 Jun 17 01:41 ATLAS.root_0
2024-06-17 19:16:35 (16456): Guest Log: -rwxrwxrwx. 1 root root 342934105 Jun 17 16:16 HITS.pool.root.1
2024-06-17 19:16:35 (16456): Guest Log: -rwxrwxrwx. 1 root root      8879 Jun 17 01:41 init_data.xml
2024-06-17 19:16:35 (16456): Guest Log: -rwxrwxrwx. 1 root root    482529 Jun 14 12:54 input.tar.gz
2024-06-17 19:16:35 (16456): Guest Log: -rwxrwxrwx. 1 root root   6768640 Jun 17 16:16 result.tar.gz
2024-06-17 19:16:35 (16456): Guest Log: -rwxrwxrwx. 1 root root     17537 Jun 14 12:54 start_atlas.sh
2024-06-17 19:16:35 (16456): Guest Log:  *** Success! Shutting down the machine. ***
2024-06-17 19:16:35 (16456): VM Completion File Detected.
2024-06-17 19:16:35 (16456): Powering off VM.
2024-06-17 19:16:35 (16456): Successfully stopped VM.
2024-06-17 19:16:35 (16456): Deregistering VM. (boinc_ee9aaab6a9179511, slot#2)
2024-06-17 19:16:35 (16456): Removing network bandwidth throttle group from VM.
2024-06-17 19:16:36 (16456): Removing VM from VirtualBox.
19:16:41 (16456): called boinc_finish(0)

</stderr_txt>
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