Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
02:21:51 (4161234): wrapper (7.7.26015): starting
02:21:51 (4161234): wrapper: running run_atlas (--nthreads 6)
[2024-06-16 02:21:51] Arguments: --nthreads 6
[2024-06-16 02:21:51] Threads: 6
[2024-06-16 02:21:51] Checking for CVMFS
[2024-06-16 02:21:51] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-16 02:21:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-16 02:21:51] Running cvmfs_config stat atlas.cern.ch
[2024-06-16 02:21:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-16 02:21:51] 2.11.2.0 2816 20945 66740 133921 0 55 3299581 6144000 915 130560 0 35875791 99.995 3012452 3033 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.42:3128 1
[2024-06-16 02:21:51] CVMFS is ok
[2024-06-16 02:21:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-16 02:21:51] Checking for apptainer binary...
[2024-06-16 02:21:51] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-16 02:21:51] Running /usr/bin/apptainer --version
[2024-06-16 02:21:51] apptainer version 1.3.0
[2024-06-16 02:21:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-16 02:21:51] Ryzen8
[2024-06-16 02:21:51] apptainer works
[2024-06-16 02:21:51] Set ATHENA_PROC_NUMBER=6
[2024-06-16 02:21:51] Set ATHENA_CORE_NUMBER=6
[2024-06-16 02:21:51] Starting ATLAS job with PandaID=6230043037
[2024-06-16 02:21:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-16 06:00:56]  *** The last 200 lines of the pilot log: ***
[2024-06-16 06:00:56] 2024-06-16 04:00:33,417 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-16 06:00:56] 2024-06-16 04:00:35,920 | INFO     | monitor loop #1031: job 0:6230043037 is in state 'finished'
[2024-06-16 06:00:56] 2024-06-16 04:00:35,920 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-16 06:00:56] 2024-06-16 04:00:38,423 | INFO     | monitor loop #1032: job 0:6230043037 is in state 'finished'
[2024-06-16 06:00:56] 2024-06-16 04:00:38,423 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-16 06:00:56] 2024-06-16 04:00:40,884 | INFO     | CPU arch script returned: x86-64-v4
[2024-06-16 06:00:56] 2024-06-16 04:00:40,885 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6230043037/memory_monitor_summary.json (trf name=prmon)
[2024-06-16 06:00:56] 2024-06-16 04:00:40,885 | INFO     | extracted standard info from prmon json
[2024-06-16 06:00:56] 2024-06-16 04:00:40,885 | INFO     | extracted standard memory fields from prmon json
[2024-06-16 06:00:56] 2024-06-16 04:00:40,885 | WARNING  | GPU info not found in prmon json
[2024-06-16 06:00:56] 2024-06-16 04:00:40,885 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-16 06:00:56] 2024-06-16 04:00:40,885 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-16 06:00:56] 2024-06-16 04:00:40,887 | INFO     | fitting pss+swap vs Time
[2024-06-16 06:00:56] 2024-06-16 04:00:40,888 | INFO     | model: linear, x: [1718497334.0, 1718497395.0, 1718497456.0, 1718497517.0, 1718497578.0, 1718497639.0, 1718497700.0, 1718497761.0, 1718497822.0, 1718497883.0, 1718
[2024-06-16 06:00:56] 2024-06-16 04:00:40,888 | INFO     | sum of square deviations: 3081657780.0
[2024-06-16 06:00:56] 2024-06-16 04:00:40,888 | INFO     | sum of deviations: -56423280288.0
[2024-06-16 06:00:56] 2024-06-16 04:00:40,888 | INFO     | mean x: 1718503861.0
[2024-06-16 06:00:56] 2024-06-16 04:00:40,888 | INFO     | mean y: 2565201.0837209304
[2024-06-16 06:00:56] 2024-06-16 04:00:40,888 | INFO     | -- intersect: 31467326036.79637
[2024-06-16 06:00:56] 2024-06-16 04:00:40,888 | INFO     | intersect: 31467326036.79637
[2024-06-16 06:00:56] 2024-06-16 04:00:40,889 | INFO     | chi2: 2.8081145945790666
[2024-06-16 06:00:56] 2024-06-16 04:00:40,889 | INFO     | model: linear, x: [1718497334.0, 1718497395.0, 1718497456.0, 1718497517.0, 1718497578.0, 1718497639.0, 1718497700.0, 1718497761.0, 1718497822.0, 1718497883.0, 1718
[2024-06-16 06:00:56] 2024-06-16 04:00:40,889 | INFO     | sum of square deviations: 2871616632.5
[2024-06-16 06:00:56] 2024-06-16 04:00:40,889 | INFO     | sum of deviations: -41211015650.49999
[2024-06-16 06:00:56] 2024-06-16 04:00:40,889 | INFO     | mean x: 1718503708.5
[2024-06-16 06:00:56] 2024-06-16 04:00:40,889 | INFO     | mean y: 2576062.8714285716
[2024-06-16 06:00:56] 2024-06-16 04:00:40,889 | INFO     | -- intersect: 24665089305.378838
[2024-06-16 06:00:56] 2024-06-16 04:00:40,889 | INFO     | intersect: 24665089305.378838
[2024-06-16 06:00:56] 2024-06-16 04:00:40,890 | INFO     | chi2: 2.1447350322945957
[2024-06-16 06:00:56] 2024-06-16 04:00:40,890 | INFO     | current chi2=2.1447350322945957 (change=23.623664203914398 %)
[2024-06-16 06:00:56] 2024-06-16 04:00:40,890 | INFO     | right removable region: 209
[2024-06-16 06:00:56] 2024-06-16 04:00:40,890 | INFO     | model: linear, x: [1718497639.0, 1718497700.0, 1718497761.0, 1718497822.0, 1718497883.0, 1718497944.0, 1718498005.0, 1718498066.0, 1718498127.0, 1718498188.0, 1718
[2024-06-16 06:00:56] 2024-06-16 04:00:40,890 | INFO     | sum of square deviations: 2871616632.5
[2024-06-16 06:00:56] 2024-06-16 04:00:40,890 | INFO     | sum of deviations: -96863041127.0
[2024-06-16 06:00:56] 2024-06-16 04:00:40,890 | INFO     | mean x: 1718504013.5
[2024-06-16 06:00:56] 2024-06-16 04:00:40,891 | INFO     | mean y: 2594353.942857143
[2024-06-16 06:00:56] 2024-06-16 04:00:40,891 | INFO     | -- intersect: 57969776690.41202
[2024-06-16 06:00:56] 2024-06-16 04:00:40,891 | INFO     | intersect: 57969776690.41202
[2024-06-16 06:00:56] 2024-06-16 04:00:40,891 | INFO     | chi2: 1.0482798633850188
[2024-06-16 06:00:56] 2024-06-16 04:00:40,891 | INFO     | current chi2=1.0482798633850188 (change=62.669619487442795 %)
[2024-06-16 06:00:56] 2024-06-16 04:00:40,891 | INFO     | model: linear, x: [1718497944.0, 1718498005.0, 1718498066.0, 1718498127.0, 1718498188.0, 1718498249.0, 1718498310.0, 1718498371.0, 1718498432.0, 1718498493.0, 1718
[2024-06-16 06:00:56] 2024-06-16 04:00:40,891 | INFO     | sum of square deviations: 2671343110.0
[2024-06-16 06:00:56] 2024-06-16 04:00:40,891 | INFO     | sum of deviations: -93155256472.00003
[2024-06-16 06:00:56] 2024-06-16 04:00:40,892 | INFO     | mean x: 1718504166.0
[2024-06-16 06:00:56] 2024-06-16 04:00:40,892 | INFO     | mean y: 2591500.1024390245
[2024-06-16 06:00:56] 2024-06-16 04:00:40,892 | INFO     | -- intersect: 59930384276.94664
[2024-06-16 06:00:56] 2024-06-16 04:00:40,892 | INFO     | intersect: 59930384276.94664
[2024-06-16 06:00:56] 2024-06-16 04:00:40,892 | INFO     | chi2: 1.037848811574134
[2024-06-16 06:00:56] 2024-06-16 04:00:40,892 | INFO     | current chi2=1.037848811574134 (change=0.9950636442830908 %)
[2024-06-16 06:00:56] 2024-06-16 04:00:40,892 | INFO     | left removable region: 20
[2024-06-16 06:00:56] 2024-06-16 04:00:40,892 | INFO     | model: linear, x: [1718498554.0, 1718498615.0, 1718498676.0, 1718498737.0, 1718498798.0, 1718498859.0, 1718498920.0, 1718498981.0, 1718499042.0, 1718499103.0, 1718
[2024-06-16 06:00:56] 2024-06-16 04:00:40,892 | INFO     | sum of square deviations: 2093397390.0
[2024-06-16 06:00:56] 2024-06-16 04:00:40,893 | INFO     | sum of deviations: -61940149507.0
[2024-06-16 06:00:56] 2024-06-16 04:00:40,893 | INFO     | mean x: 1718504288.0
[2024-06-16 06:00:56] 2024-06-16 04:00:40,893 | INFO     | mean y: 2590494.82010582
[2024-06-16 06:00:56] 2024-06-16 04:00:40,893 | INFO     | -- intersect: 50850276192.53686
[2024-06-16 06:00:56] 2024-06-16 04:00:40,893 | INFO     | intersect: 50850276192.53686
[2024-06-16 06:00:56] 2024-06-16 04:00:40,893 | INFO     | chi2: 0.33536696359931584
[2024-06-16 06:00:56] 2024-06-16 04:00:40,893 | INFO     | -- intersect: 50850276192.53686
[2024-06-16 06:00:56] 2024-06-16 04:00:40,893 | INFO     | current memory leak: -29.59 B/s (using 189 data points, chi2=0.34)
[2024-06-16 06:00:56] 2024-06-16 04:00:40,893 | INFO     | ..............................
[2024-06-16 06:00:56] 2024-06-16 04:00:40,893 | INFO     | . Timing measurements:
[2024-06-16 06:00:56] 2024-06-16 04:00:40,893 | INFO     | . get job = 0 s
[2024-06-16 06:00:56] 2024-06-16 04:00:40,893 | INFO     | . initial setup = 1 s
[2024-06-16 06:00:56] 2024-06-16 04:00:40,893 | INFO     | . payload setup = 2 s
[2024-06-16 06:00:56] 2024-06-16 04:00:40,893 | INFO     | . stage-in = 0 s
[2024-06-16 06:00:56] 2024-06-16 04:00:40,893 | INFO     | . payload execution = 13074 s
[2024-06-16 06:00:56] 2024-06-16 04:00:40,893 | INFO     | . stage-out = 0 s
[2024-06-16 06:00:56] 2024-06-16 04:00:40,893 | INFO     | . log creation = 0 s
[2024-06-16 06:00:56] 2024-06-16 04:00:40,893 | INFO     | ..............................
[2024-06-16 06:00:56] 2024-06-16 04:00:41,330 | INFO     | 
[2024-06-16 06:00:56] 2024-06-16 04:00:41,330 | INFO     | job summary report
[2024-06-16 06:00:56] 2024-06-16 04:00:41,330 | INFO     | --------------------------------------------------
[2024-06-16 06:00:56] 2024-06-16 04:00:41,330 | INFO     | PanDA job id: 6230043037
[2024-06-16 06:00:56] 2024-06-16 04:00:41,330 | INFO     | task id: 38921013
[2024-06-16 06:00:56] 2024-06-16 04:00:41,330 | INFO     | errors: (none)
[2024-06-16 06:00:56] 2024-06-16 04:00:41,330 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-16 06:00:56] 2024-06-16 04:00:41,330 | INFO     | pilot state: finished 
[2024-06-16 06:00:56] 2024-06-16 04:00:41,330 | INFO     | transexitcode: 0
[2024-06-16 06:00:56] 2024-06-16 04:00:41,330 | INFO     | exeerrorcode: 0
[2024-06-16 06:00:56] 2024-06-16 04:00:41,330 | INFO     | exeerrordiag: 
[2024-06-16 06:00:56] 2024-06-16 04:00:41,330 | INFO     | exitcode: 0
[2024-06-16 06:00:56] 2024-06-16 04:00:41,330 | INFO     | exitmsg: OK
[2024-06-16 06:00:56] 2024-06-16 04:00:41,330 | INFO     | cpuconsumptiontime: 75364 s
[2024-06-16 06:00:56] 2024-06-16 04:00:41,330 | INFO     | nevents: 400
[2024-06-16 06:00:56] 2024-06-16 04:00:41,330 | INFO     | neventsw: 0
[2024-06-16 06:00:56] 2024-06-16 04:00:41,330 | INFO     | pid: 4171901
[2024-06-16 06:00:56] 2024-06-16 04:00:41,330 | INFO     | pgrp: 4171901
[2024-06-16 06:00:56] 2024-06-16 04:00:41,330 | INFO     | corecount: 6
[2024-06-16 06:00:56] 2024-06-16 04:00:41,330 | INFO     | event service: False
[2024-06-16 06:00:56] 2024-06-16 04:00:41,330 | INFO     | sizes: {0: 2377621, 1: 2379157, 3: 2379363, 11: 2379391, 13080: 2409493, 13082: 2418453, 13083: 2418637, 13112: 2418807}
[2024-06-16 06:00:56] 2024-06-16 04:00:41,330 | INFO     | --------------------------------------------------
[2024-06-16 06:00:56] 2024-06-16 04:00:41,330 | INFO     | 
[2024-06-16 06:00:56] 2024-06-16 04:00:41,330 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2024-06-16 06:00:56] 2024-06-16 04:00:41,343 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-16 06:00:56] 2024-06-16 04:00:41,343 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-16 06:00:56] 2024-06-16 04:00:41,343 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-16 06:00:56] 2024-06-16 04:00:41,343 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-16 06:00:56] 2024-06-16 04:00:41,343 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-16 06:00:56] 2024-06-16 04:00:41,343 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-16 06:00:56] 2024-06-16 04:00:41,343 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-16 06:00:56] 2024-06-16 04:00:41,343 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-16 06:00:56] 2024-06-16 04:00:41,343 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-16 06:00:56] 2024-06-16 04:00:41,343 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-16 06:00:56] 2024-06-16 04:00:41,343 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-16 06:00:56] 2024-06-16 04:00:41,343 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-16 06:00:56] 2024-06-16 04:00:41,343 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-16 06:00:56] 2024-06-16 04:00:41,343 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-16 06:00:56] 2024-06-16 04:00:41,343 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-16 06:00:56] 2024-06-16 04:00:41,343 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-16 06:00:56] 2024-06-16 04:00:41,343 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-16 06:00:56] 2024-06-16 04:00:41,343 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-16 06:00:56] 2024-06-16 04:00:41,343 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-16 06:00:56] 2024-06-16 04:00:41,343 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-16 06:00:56] 2024-06-16 04:00:41,344 | INFO     | job 6230043037 has completed (purged errors)
[2024-06-16 06:00:56] 2024-06-16 04:00:41,344 | INFO     | overall cleanup function is called
[2024-06-16 06:00:56] 2024-06-16 04:00:42,350 | INFO     | --- collectZombieJob: --- 10, [4171901]
[2024-06-16 06:00:56] 2024-06-16 04:00:42,350 | INFO     | zombie collector waiting for pid 4171901
[2024-06-16 06:00:56] 2024-06-16 04:00:42,350 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-16 06:00:56] 2024-06-16 04:00:43,355 | INFO     | collected zombie processes
[2024-06-16 06:00:56] 2024-06-16 04:00:43,356 | INFO     | will now attempt to kill all subprocesses of pid=4171901
[2024-06-16 06:00:56] 2024-06-16 04:00:43,395 | INFO     | process IDs to be killed: [4171901] (in reverse order)
[2024-06-16 06:00:56] 2024-06-16 04:00:43,421 | WARNING  | found no corresponding commands to process id(s)
[2024-06-16 06:00:56] 2024-06-16 04:00:43,421 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-16 06:00:56] 2024-06-16 04:00:43,423 | INFO     | did not find any defunct processes belonging to 4171901
[2024-06-16 06:00:56] 2024-06-16 04:00:43,425 | INFO     | did not find any defunct processes belonging to 4171901
[2024-06-16 06:00:56] 2024-06-16 04:00:43,425 | INFO     | ready for new job
[2024-06-16 06:00:56] 2024-06-16 04:00:43,425 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-16 06:00:56] 2024-06-16 04:00:43,426 | INFO     | *************************************
[2024-06-16 06:00:56] 2024-06-16 04:00:43,426 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-16 06:00:56] 2024-06-16 04:00:43,426 | INFO     | *************************************
[2024-06-16 06:00:56] 2024-06-16 04:00:43,426 | INFO     | 
[2024-06-16 06:00:56] 2024-06-16 04:00:43,426 | INFO     | architecture information:
[2024-06-16 06:00:56] 2024-06-16 04:00:43,426 | INFO     | executing command: cat /etc/os-release
[2024-06-16 06:00:56] 2024-06-16 04:00:43,435 | INFO     | cat /etc/os-release:
[2024-06-16 06:00:56] NAME="CentOS Linux"
[2024-06-16 06:00:56] VERSION="7 (Core)"
[2024-06-16 06:00:56] ID="centos"
[2024-06-16 06:00:56] ID_LIKE="rhel fedora"
[2024-06-16 06:00:56] VERSION_ID="7"
[2024-06-16 06:00:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-16 06:00:56] ANSI_COLOR="0;31"
[2024-06-16 06:00:56] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-16 06:00:56] HOME_URL="https://www.centos.org/"
[2024-06-16 06:00:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-16 06:00:56] 
[2024-06-16 06:00:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-16 06:00:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-16 06:00:56] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-16 06:00:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-16 06:00:56] 
[2024-06-16 06:00:56] 2024-06-16 04:00:43,435 | INFO     | *************************************
[2024-06-16 06:00:56] 2024-06-16 04:00:43,938 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2024-06-16 06:00:56] 2024-06-16 04:00:43,948 | INFO     | sufficient remaining disk space (99644080128 B)
[2024-06-16 06:00:56] 2024-06-16 04:00:43,948 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-16 06:00:56] 2024-06-16 04:00:43,948 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-16 06:00:56] 2024-06-16 04:00:43,984 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-16 06:00:56] 2024-06-16 04:00:44,151 | INFO     | all data control threads have been joined
[2024-06-16 06:00:56] 2024-06-16 04:00:44,435 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-16 06:00:56] 2024-06-16 04:00:44,436 | INFO     | aborting loop
[2024-06-16 06:00:56] 2024-06-16 04:00:44,557 | INFO     | all job control threads have been joined
[2024-06-16 06:00:56] 2024-06-16 04:00:44,560 | INFO     | found 0 job(s) in 20 queues
[2024-06-16 06:00:56] 2024-06-16 04:00:44,561 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-16 06:00:56] 2024-06-16 04:00:44,561 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-16 06:00:56] 2024-06-16 04:00:44,631 | INFO     | all payload control threads have been joined
[2024-06-16 06:00:56] 2024-06-16 04:00:44,950 | INFO     | [job] retrieve thread has finished
[2024-06-16 06:00:56] 2024-06-16 04:00:45,073 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-16 06:00:56] 2024-06-16 04:00:45,157 | INFO     | [data] control thread has finished
[2024-06-16 06:00:56] 2024-06-16 04:00:45,359 | INFO     | [payload] validate_post thread has finished
[2024-06-16 06:00:56] 2024-06-16 04:00:45,368 | INFO     | [job] validate thread has finished
[2024-06-16 06:00:56] 2024-06-16 04:00:45,427 | INFO     | [payload] validate_pre thread has finished
[2024-06-16 06:00:56] 2024-06-16 04:00:45,440 | INFO     | [job] job monitor thread has finished
[2024-06-16 06:00:56] 2024-06-16 04:00:45,454 | INFO     | [job] create_data_payload thread has finished
[2024-06-16 06:00:56] 2024-06-16 04:00:45,560 | INFO     | [job] control thread has finished
[2024-06-16 06:00:56] 2024-06-16 04:00:45,634 | INFO     | [payload] control thread has finished
[2024-06-16 06:00:56] 2024-06-16 04:00:45,950 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-16 06:00:56] 2024-06-16 04:00:45,987 | INFO     | [data] copytool_out thread has finished
[2024-06-16 06:00:56] 2024-06-16 04:00:46,047 | INFO     | [data] copytool_in thread has finished
[2024-06-16 06:00:56] 2024-06-16 04:00:46,070 | INFO     | [payload] execute_payloads thread has finished
[2024-06-16 06:00:56] 2024-06-16 04:00:46,224 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-16 06:00:56] 2024-06-16 04:00:46,359 | INFO     | [payload] failed_post thread has finished
[2024-06-16 06:00:56] 2024-06-16 04:00:46,956 | INFO     | [job] queue monitor thread has finished
[2024-06-16 06:00:56] 2024-06-16 04:00:49,079 | INFO     | [data] queue_monitor thread has finished
[2024-06-16 06:00:56] 2024-06-16 04:00:51,164 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139751734323008)>', '<ExcThread(monitor, started 139751214524160)>']
[2024-06-16 06:00:56] 2024-06-16 04:00:51,587 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-16 06:00:56] 2024-06-16 04:00:51,587 | INFO     | [monitor] control thread has ended
[2024-06-16 06:00:56] 2024-06-16 04:00:56,187 | INFO     | all workflow threads have been joined
[2024-06-16 06:00:56] 2024-06-16 04:00:56,187 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-16 06:00:56] 2024-06-16 04:00:56,187 | INFO     | traces error code: 0
[2024-06-16 06:00:56] 2024-06-16 04:00:56,187 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-16 06:00:56] 2024-06-16 04:00:56,242 [wrapper] ==== pilot stdout END ====
[2024-06-16 06:00:56] 2024-06-16 04:00:56,243 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-16 06:00:56] 2024-06-16 04:00:56,245 [wrapper] pilotpid: 4165440
[2024-06-16 06:00:56] 2024-06-16 04:00:56,246 [wrapper] Pilot exit status: 0
[2024-06-16 06:00:56] 2024-06-16 04:00:56,251 [wrapper] pandaids: 6230043037
[2024-06-16 06:00:56] 2024-06-16 04:00:56,266 [wrapper] cleanup supervisor_pilot   36218 4165441
[2024-06-16 06:00:56] 2024-06-16 04:00:56,268 [wrapper] Test setup, not cleaning
[2024-06-16 06:00:56] 2024-06-16 04:00:56,269 [wrapper] ==== wrapper stdout END ====
[2024-06-16 06:00:56] 2024-06-16 04:00:56,270 [wrapper] ==== wrapper stderr END ====
[2024-06-16 06:00:56] 2024-06-16 04:00:56,273 [wrapper] apfmon messages muted
[2024-06-16 06:00:56]  *** Error codes and diagnostics ***
[2024-06-16 06:00:56]     "exeErrorCode": 0,
[2024-06-16 06:00:56]     "exeErrorDiag": "",
[2024-06-16 06:00:56]     "pilotErrorCode": 0,
[2024-06-16 06:00:56]     "pilotErrorDiag": "",
[2024-06-16 06:00:56]  *** Listing of results directory ***
[2024-06-16 06:00:56] insgesamt 870804
[2024-06-16 06:00:56] -rw-r--r-- 1 boinc boinc    469766 14. Jun 08:04 pilot3.tar.gz
[2024-06-16 06:00:56] -rw-r--r-- 1 boinc boinc      5654 14. Jun 08:16 queuedata.json
[2024-06-16 06:00:56] -rwx------ 1 boinc boinc     32308 14. Jun 08:16 runpilot2-wrapper.sh
[2024-06-16 06:00:56] -rw-r--r-- 1 boinc boinc       100 16. Jun 02:21 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-16 06:00:56] -rwxr-xr-x 1 boinc boinc      7986 16. Jun 02:21 run_atlas
[2024-06-16 06:00:56] -rw-r--r-- 1 boinc boinc       105 16. Jun 02:21 job.xml
[2024-06-16 06:00:56] -rw-r--r-- 2 boinc boinc 541496536 16. Jun 02:21 EVNT.38776210._000185.pool.root.1
[2024-06-16 06:00:56] -rw-r--r-- 2 boinc boinc     17537 16. Jun 02:21 start_atlas.sh
[2024-06-16 06:00:56] drwxrwx--x 2 boinc boinc      4096 16. Jun 02:21 shared
[2024-06-16 06:00:56] -rw-r--r-- 2 boinc boinc    482520 16. Jun 02:21 input.tar.gz
[2024-06-16 06:00:56] -rw-r--r-- 1 boinc boinc      7137 16. Jun 02:21 init_data.xml
[2024-06-16 06:00:56] -rw-r--r-- 1 boinc boinc         0 16. Jun 02:21 boinc_lockfile
[2024-06-16 06:00:56] -rw-r--r-- 1 boinc boinc      2646 16. Jun 02:21 pandaJob.out
[2024-06-16 06:00:56] -rw------- 1 boinc boinc       462 16. Jun 02:21 setup.sh.local
[2024-06-16 06:00:56] -rw------- 1 boinc boinc   1020501 16. Jun 02:21 agis_schedconf.cvmfs.json
[2024-06-16 06:00:56] -rw------- 1 boinc boinc   1316805 16. Jun 02:21 cric_ddmendpoints.json
[2024-06-16 06:00:56] drwx------ 4 boinc boinc      4096 16. Jun 02:21 pilot3
[2024-06-16 06:00:56] -rw------- 1 boinc boinc 343437442 16. Jun 05:59 HITS.38921013._033435.pool.root.1
[2024-06-16 06:00:56] -rw-r--r-- 1 boinc boinc       531 16. Jun 06:00 boinc_task_state.xml
[2024-06-16 06:00:56] -rw------- 1 boinc boinc      1025 16. Jun 06:00 memory_monitor_summary.json
[2024-06-16 06:00:56] -rw------- 1 boinc boinc         0 16. Jun 06:00 agis_ddmendpoints.agis.ALL.json
[2024-06-16 06:00:56] -rw------- 1 boinc boinc    351366 16. Jun 06:00 log.38921013._033435.job.log.tgz.1
[2024-06-16 06:00:56] -rw------- 1 boinc boinc        95 16. Jun 06:00 pilot_heartbeat.json
[2024-06-16 06:00:56] -rw------- 1 boinc boinc      7682 16. Jun 06:00 heartbeat.json
[2024-06-16 06:00:56] -rw-r--r-- 1 boinc boinc        28 16. Jun 06:00 wrapper_checkpoint.txt
[2024-06-16 06:00:56] -rw-r--r-- 1 boinc boinc      8192 16. Jun 06:00 boinc_mmap_file
[2024-06-16 06:00:56] -rw------- 1 boinc boinc      4211 16. Jun 06:00 pilotlog.txt
[2024-06-16 06:00:56] -rw------- 1 boinc boinc   1268082 16. Jun 06:00 log.38921013._033435.job.log.1
[2024-06-16 06:00:56] -rw------- 1 boinc boinc       357 16. Jun 06:00 output.list
[2024-06-16 06:00:56] -rw-r--r-- 1 boinc boinc       620 16. Jun 06:00 runtime_log
[2024-06-16 06:00:56] -rw------- 1 boinc boinc   1638400 16. Jun 06:00 result.tar.gz
[2024-06-16 06:00:56] -rw-r--r-- 1 boinc boinc     11335 16. Jun 06:00 runtime_log.err
[2024-06-16 06:00:56] -rw------- 1 boinc boinc       635 16. Jun 06:00 On4NDmHQFc5n7Olcko1bjSoqABFKDmABFKDmOtvXDmBkoKDmm8CsJo.diag
[2024-06-16 06:00:56] -rw-r--r-- 1 boinc boinc     21320 16. Jun 06:00 stderr.txt
[2024-06-16 06:00:56] HITS file was successfully produced:
[2024-06-16 06:00:56] -rw------- 1 boinc boinc 343437442 16. Jun 05:59 shared/HITS.pool.root.1
[2024-06-16 06:00:56]  *** Contents of shared directory: ***
[2024-06-16 06:00:56] insgesamt 866300
[2024-06-16 06:00:56] -rw-r--r-- 2 boinc boinc 541496536 16. Jun 02:21 ATLAS.root_0
[2024-06-16 06:00:56] -rw-r--r-- 2 boinc boinc     17537 16. Jun 02:21 start_atlas.sh
[2024-06-16 06:00:56] -rw-r--r-- 2 boinc boinc    482520 16. Jun 02:21 input.tar.gz
[2024-06-16 06:00:56] -rw------- 1 boinc boinc 343437442 16. Jun 05:59 HITS.pool.root.1
[2024-06-16 06:00:56] -rw------- 1 boinc boinc   1638400 16. Jun 06:00 result.tar.gz
06:00:57 (4161234): run_atlas exited; CPU time 75330.305408
06:00:57 (4161234): called boinc_finish(0)

</stderr_txt>
]]>

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