Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
11:23:40 (261890): wrapper (7.7.26015): starting
11:23:40 (261890): wrapper: running run_atlas (--nthreads 12)
[2024-06-14 11:23:40] Arguments: --nthreads 12
[2024-06-14 11:23:40] Threads: 12
[2024-06-14 11:23:40] Checking for CVMFS
[2024-06-14 11:23:40] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-14 11:23:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-14 11:23:40] Running cvmfs_config stat atlas.cern.ch
[2024-06-14 11:23:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-14 11:23:41] 2.10.1.0 196204 224154 182064 133876 2 423 31856793 45568001 6087 130560 0 710969572 99.760 468288523 3029 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2024-06-14 11:23:41] CVMFS is ok
[2024-06-14 11:23:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-14 11:23:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-14 11:23:41] Further information can be found at the LHC@home message board.
[2024-06-14 11:23:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-14 11:23:41] Checking for apptainer binary...
[2024-06-14 11:23:41] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-14 11:23:41] Running /usr/bin/apptainer --version
[2024-06-14 11:23:41] apptainer version 1.1.8-1.el7
[2024-06-14 11:23:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-14 11:23:42] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0032.triumf.lcg
[2024-06-14 11:23:42] apptainer works
[2024-06-14 11:23:42] Set ATHENA_PROC_NUMBER=12
[2024-06-14 11:23:42] Set ATHENA_CORE_NUMBER=12
[2024-06-14 11:23:42] Starting ATLAS job with PandaID=6229577728
[2024-06-14 11:23:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-14 15:05:03]  *** The last 200 lines of the pilot log: ***
[2024-06-14 15:05:03] 2024-06-14 22:04:42,429 | INFO     | current chi2=5.871842604996453 (change=0.019315511959323527 %)
[2024-06-14 15:05:03] 2024-06-14 22:04:42,429 | INFO     | right removable region: 211
[2024-06-14 15:05:03] 2024-06-14 22:04:42,429 | INFO     | model: linear, x: [1718389760.0, 1718389821.0, 1718389882.0, 1718389943.0, 1718390004.0, 1718390065.0, 1718390126.0, 1718390187.0, 1718390248.0, 1718390309.0, 1718
[2024-06-14 15:05:03] 2024-06-14 22:04:42,429 | INFO     | sum of square deviations: 2954175756.2783093
[2024-06-14 15:05:03] 2024-06-14 22:04:42,431 | INFO     | sum of deviations: 90842228036.2594
[2024-06-14 15:05:03] 2024-06-14 22:04:42,431 | INFO     | mean x: 1718396196.20283
[2024-06-14 15:05:03] 2024-06-14 22:04:42,431 | INFO     | mean y: 2681322.900943396
[2024-06-14 15:05:03] 2024-06-14 22:04:42,431 | INFO     | -- intersect: -52838771586.71124
[2024-06-14 15:05:03] 2024-06-14 22:04:42,431 | INFO     | intersect: -52838771586.71124
[2024-06-14 15:05:03] 2024-06-14 22:04:42,432 | INFO     | chi2: 2.9795757069659876
[2024-06-14 15:05:03] 2024-06-14 22:04:42,432 | INFO     | current chi2=2.9795757069659876 (change=49.26634811142437 %)
[2024-06-14 15:05:03] 2024-06-14 22:04:42,432 | INFO     | model: linear, x: [1718390065.0, 1718390126.0, 1718390187.0, 1718390248.0, 1718390309.0, 1718390370.0, 1718390431.0, 1718390492.0, 1718390553.0, 1718390614.0, 1718
[2024-06-14 15:05:03] 2024-06-14 22:04:42,432 | INFO     | sum of square deviations: 2749977643.7488036
[2024-06-14 15:05:03] 2024-06-14 22:04:42,434 | INFO     | sum of deviations: 37854484644.70049
[2024-06-14 15:05:03] 2024-06-14 22:04:42,434 | INFO     | mean x: 1718396348.7198067
[2024-06-14 15:05:03] 2024-06-14 22:04:42,434 | INFO     | mean y: 2720903.5120772948
[2024-06-14 15:05:03] 2024-06-14 22:04:42,435 | INFO     | -- intersect: -23651656194.422325
[2024-06-14 15:05:03] 2024-06-14 22:04:42,435 | INFO     | intersect: -23651656194.422325
[2024-06-14 15:05:03] 2024-06-14 22:04:42,435 | INFO     | chi2: 1.0386373951574126
[2024-06-14 15:05:03] 2024-06-14 22:04:42,435 | INFO     | current chi2=1.0386373951574126 (change=65.14143296546655 %)
[2024-06-14 15:05:03] 2024-06-14 22:04:42,435 | INFO     | model: linear, x: [1718390370.0, 1718390431.0, 1718390492.0, 1718390553.0, 1718390614.0, 1718390675.0, 1718390736.0, 1718390797.0, 1718390858.0, 1718390919.0, 1718
[2024-06-14 15:05:03] 2024-06-14 22:04:42,436 | INFO     | sum of square deviations: 2555407618.594046
[2024-06-14 15:05:03] 2024-06-14 22:04:42,437 | INFO     | sum of deviations: 5251440025.405936
[2024-06-14 15:05:03] 2024-06-14 22:04:42,437 | INFO     | mean x: 1718396501.2376237
[2024-06-14 15:05:03] 2024-06-14 22:04:42,437 | INFO     | mean y: 2746298.2623762377
[2024-06-14 15:05:03] 2024-06-14 22:04:42,437 | INFO     | -- intersect: -3528610539.0791764
[2024-06-14 15:05:03] 2024-06-14 22:04:42,438 | INFO     | intersect: -3528610539.0791764
[2024-06-14 15:05:03] 2024-06-14 22:04:42,438 | INFO     | chi2: 0.12869439910185587
[2024-06-14 15:05:03] 2024-06-14 22:04:42,438 | INFO     | current chi2=0.12869439910185587 (change=87.60930429600494 %)
[2024-06-14 15:05:03] 2024-06-14 22:04:42,438 | INFO     | model: linear, x: [1718390675.0, 1718390736.0, 1718390797.0, 1718390858.0, 1718390919.0, 1718390980.0, 1718391041.0, 1718391102.0, 1718391164.0, 1718391224.0, 1718
[2024-06-14 15:05:03] 2024-06-14 22:04:42,439 | INFO     | sum of square deviations: 2370233118.304574
[2024-06-14 15:05:03] 2024-06-14 22:04:42,440 | INFO     | sum of deviations: -5106091245.93909
[2024-06-14 15:05:03] 2024-06-14 22:04:42,440 | INFO     | mean x: 1718396653.7563453
[2024-06-14 15:05:03] 2024-06-14 22:04:42,440 | INFO     | mean y: 2754761.7512690355
[2024-06-14 15:05:03] 2024-06-14 22:04:42,441 | INFO     | -- intersect: 3704622752.302571
[2024-06-14 15:05:03] 2024-06-14 22:04:42,441 | INFO     | intersect: 3704622752.302571
[2024-06-14 15:05:03] 2024-06-14 22:04:42,441 | INFO     | chi2: 0.018724111452645884
[2024-06-14 15:05:03] 2024-06-14 22:04:42,441 | INFO     | current chi2=0.018724111452645884 (change=85.45071768210629 %)
[2024-06-14 15:05:03] 2024-06-14 22:04:42,441 | INFO     | model: linear, x: [1718390980.0, 1718391041.0, 1718391102.0, 1718391164.0, 1718391224.0, 1718391286.0, 1718391348.0, 1718391407.0, 1718391478.0, 1718391529.0, 1718
[2024-06-14 15:05:03] 2024-06-14 22:04:42,442 | INFO     | sum of square deviations: 2194221580.369793
[2024-06-14 15:05:03] 2024-06-14 22:04:42,443 | INFO     | sum of deviations: -5462394294.421859
[2024-06-14 15:05:03] 2024-06-14 22:04:42,443 | INFO     | mean x: 1718396806.2760417
[2024-06-14 15:05:03] 2024-06-14 22:04:42,443 | INFO     | mean y: 2755060.234375
[2024-06-14 15:05:03] 2024-06-14 22:04:42,443 | INFO     | -- intersect: 4280609673.519636
[2024-06-14 15:05:03] 2024-06-14 22:04:42,443 | INFO     | intersect: 4280609673.519636
[2024-06-14 15:05:03] 2024-06-14 22:04:42,444 | INFO     | chi2: 0.017752459263129516
[2024-06-14 15:05:03] 2024-06-14 22:04:42,444 | INFO     | current chi2=0.017752459263129516 (change=5.189310007974048 %)
[2024-06-14 15:05:03] 2024-06-14 22:04:42,444 | INFO     | left removable region: 50
[2024-06-14 15:05:03] 2024-06-14 22:04:42,444 | INFO     | model: linear, x: [1718392509.0, 1718392567.0, 1718392633.0, 1718392688.0, 1718392749.0, 1718392821.0, 1718392871.0, 1718392932.0, 1718392993.0, 1718393054.0, 1718
[2024-06-14 15:05:03] 2024-06-14 22:04:42,444 | INFO     | sum of square deviations: 1293759084.4223626
[2024-06-14 15:05:03] 2024-06-14 22:04:42,445 | INFO     | sum of deviations: 3939514549.124224
[2024-06-14 15:05:03] 2024-06-14 22:04:42,445 | INFO     | mean x: 1718397385.720497
[2024-06-14 15:05:03] 2024-06-14 22:04:42,446 | INFO     | mean y: 2744610.447204969
[2024-06-14 15:05:03] 2024-06-14 22:04:42,446 | INFO     | -- intersect: -5229799519.084796
[2024-06-14 15:05:03] 2024-06-14 22:04:42,446 | INFO     | intersect: -5229799519.084796
[2024-06-14 15:05:03] 2024-06-14 22:04:42,446 | INFO     | chi2: 0.00024364715058257776
[2024-06-14 15:05:03] 2024-06-14 22:04:42,446 | INFO     | -- intersect: -5229799519.084796
[2024-06-14 15:05:03] 2024-06-14 22:04:42,446 | INFO     | current memory leak: 3.05 B/s (using 161 data points, chi2=0.00)
[2024-06-14 15:05:03] 2024-06-14 22:04:42,447 | INFO     | ..............................
[2024-06-14 15:05:03] 2024-06-14 22:04:42,447 | INFO     | . Timing measurements:
[2024-06-14 15:05:03] 2024-06-14 22:04:42,447 | INFO     | . get job = 0 s
[2024-06-14 15:05:03] 2024-06-14 22:04:42,447 | INFO     | . initial setup = 2 s
[2024-06-14 15:05:03] 2024-06-14 22:04:42,447 | INFO     | . payload setup = 4 s
[2024-06-14 15:05:03] 2024-06-14 22:04:42,447 | INFO     | . stage-in = 0 s
[2024-06-14 15:05:03] 2024-06-14 22:04:42,448 | INFO     | . payload execution = 13217 s
[2024-06-14 15:05:03] 2024-06-14 22:04:42,448 | INFO     | . stage-out = 2 s
[2024-06-14 15:05:03] 2024-06-14 22:04:42,448 | INFO     | . log creation = 0 s
[2024-06-14 15:05:03] 2024-06-14 22:04:42,448 | INFO     | ..............................
[2024-06-14 15:05:03] 2024-06-14 22:04:43,007 | INFO     | 
[2024-06-14 15:05:03] 2024-06-14 22:04:43,007 | INFO     | job summary report
[2024-06-14 15:05:03] 2024-06-14 22:04:43,007 | INFO     | --------------------------------------------------
[2024-06-14 15:05:03] 2024-06-14 22:04:43,007 | INFO     | PanDA job id: 6229577728
[2024-06-14 15:05:03] 2024-06-14 22:04:43,008 | INFO     | task id: 38921013
[2024-06-14 15:05:03] 2024-06-14 22:04:43,008 | INFO     | errors: (none)
[2024-06-14 15:05:03] 2024-06-14 22:04:43,008 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-14 15:05:03] 2024-06-14 22:04:43,008 | INFO     | pilot state: finished 
[2024-06-14 15:05:03] 2024-06-14 22:04:43,008 | INFO     | transexitcode: 0
[2024-06-14 15:05:03] 2024-06-14 22:04:43,008 | INFO     | exeerrorcode: 0
[2024-06-14 15:05:03] 2024-06-14 22:04:43,008 | INFO     | exeerrordiag: 
[2024-06-14 15:05:03] 2024-06-14 22:04:43,009 | INFO     | exitcode: 0
[2024-06-14 15:05:03] 2024-06-14 22:04:43,009 | INFO     | exitmsg: OK
[2024-06-14 15:05:03] 2024-06-14 22:04:43,009 | INFO     | cpuconsumptiontime: 100136 s
[2024-06-14 15:05:03] 2024-06-14 22:04:43,009 | INFO     | nevents: 400
[2024-06-14 15:05:03] 2024-06-14 22:04:43,009 | INFO     | neventsw: 0
[2024-06-14 15:05:03] 2024-06-14 22:04:43,009 | INFO     | pid: 272416
[2024-06-14 15:05:03] 2024-06-14 22:04:43,009 | INFO     | pgrp: 272416
[2024-06-14 15:05:03] 2024-06-14 22:04:43,009 | INFO     | corecount: 12
[2024-06-14 15:05:03] 2024-06-14 22:04:43,009 | INFO     | event service: False
[2024-06-14 15:05:03] 2024-06-14 22:04:43,010 | INFO     | sizes: {0: 2378908, 1: 2379107, 4: 2379313, 11: 2379341, 13225: 2409291, 13227: 2418245, 13231: 2418429, 13237: 2418599}
[2024-06-14 15:05:03] 2024-06-14 22:04:43,010 | INFO     | --------------------------------------------------
[2024-06-14 15:05:03] 2024-06-14 22:04:43,010 | INFO     | 
[2024-06-14 15:05:03] 2024-06-14 22:04:43,010 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-06-14 15:05:03] 2024-06-14 22:04:43,041 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-14 15:05:03] 2024-06-14 22:04:43,042 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-14 15:05:03] 2024-06-14 22:04:43,042 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-14 15:05:03] 2024-06-14 22:04:43,042 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-14 15:05:03] 2024-06-14 22:04:43,042 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-14 15:05:03] 2024-06-14 22:04:43,042 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-14 15:05:03] 2024-06-14 22:04:43,042 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-14 15:05:03] 2024-06-14 22:04:43,042 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-14 15:05:03] 2024-06-14 22:04:43,042 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-14 15:05:03] 2024-06-14 22:04:43,043 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-14 15:05:03] 2024-06-14 22:04:43,043 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-14 15:05:03] 2024-06-14 22:04:43,043 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-14 15:05:03] 2024-06-14 22:04:43,043 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-14 15:05:03] 2024-06-14 22:04:43,043 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-14 15:05:03] 2024-06-14 22:04:43,043 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-14 15:05:03] 2024-06-14 22:04:43,043 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-14 15:05:03] 2024-06-14 22:04:43,043 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-14 15:05:03] 2024-06-14 22:04:43,043 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-14 15:05:03] 2024-06-14 22:04:43,044 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-14 15:05:03] 2024-06-14 22:04:43,044 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-14 15:05:03] 2024-06-14 22:04:43,044 | INFO     | job 6229577728 has completed (purged errors)
[2024-06-14 15:05:03] 2024-06-14 22:04:43,044 | INFO     | overall cleanup function is called
[2024-06-14 15:05:03] 2024-06-14 22:04:44,051 | INFO     | --- collectZombieJob: --- 10, [272416]
[2024-06-14 15:05:03] 2024-06-14 22:04:44,051 | INFO     | zombie collector waiting for pid 272416
[2024-06-14 15:05:03] 2024-06-14 22:04:44,051 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-14 15:05:03] 2024-06-14 22:04:45,054 | INFO     | collected zombie processes
[2024-06-14 15:05:03] 2024-06-14 22:04:45,055 | INFO     | will now attempt to kill all subprocesses of pid=272416
[2024-06-14 15:05:03] 2024-06-14 22:04:45,180 | INFO     | process IDs to be killed: [272416] (in reverse order)
[2024-06-14 15:05:03] 2024-06-14 22:04:45,289 | WARNING  | found no corresponding commands to process id(s)
[2024-06-14 15:05:03] 2024-06-14 22:04:45,290 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-14 15:05:03] 2024-06-14 22:04:45,298 | INFO     | did not find any defunct processes belonging to 272416
[2024-06-14 15:05:03] 2024-06-14 22:04:45,305 | INFO     | did not find any defunct processes belonging to 272416
[2024-06-14 15:05:03] 2024-06-14 22:04:45,305 | INFO     | ready for new job
[2024-06-14 15:05:03] 2024-06-14 22:04:45,305 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-14 15:05:03] 2024-06-14 22:04:45,308 | INFO     | *************************************
[2024-06-14 15:05:03] 2024-06-14 22:04:45,308 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-14 15:05:03] 2024-06-14 22:04:45,308 | INFO     | *************************************
[2024-06-14 15:05:03] 2024-06-14 22:04:45,308 | INFO     | 
[2024-06-14 15:05:03] 2024-06-14 22:04:45,313 | INFO     | architecture information:
[2024-06-14 15:05:03] 2024-06-14 22:04:45,313 | INFO     | executing command: cat /etc/os-release
[2024-06-14 15:05:03] 2024-06-14 22:04:45,334 | INFO     | cat /etc/os-release:
[2024-06-14 15:05:03] NAME="CentOS Linux"
[2024-06-14 15:05:03] VERSION="7 (Core)"
[2024-06-14 15:05:03] ID="centos"
[2024-06-14 15:05:03] ID_LIKE="rhel fedora"
[2024-06-14 15:05:03] VERSION_ID="7"
[2024-06-14 15:05:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-14 15:05:03] ANSI_COLOR="0;31"
[2024-06-14 15:05:03] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-14 15:05:03] HOME_URL="https://www.centos.org/"
[2024-06-14 15:05:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-14 15:05:03] 
[2024-06-14 15:05:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-14 15:05:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-14 15:05:03] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-14 15:05:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-14 15:05:03] 
[2024-06-14 15:05:03] 2024-06-14 22:04:45,334 | INFO     | *************************************
[2024-06-14 15:05:03] 2024-06-14 22:04:45,838 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-06-14 15:05:03] 2024-06-14 22:04:45,863 | INFO     | sufficient remaining disk space (2088296775680 B)
[2024-06-14 15:05:03] 2024-06-14 22:04:45,864 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-14 15:05:03] 2024-06-14 22:04:45,864 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-14 15:05:03] 2024-06-14 22:04:45,865 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-14 15:05:03] 2024-06-14 22:04:45,865 | INFO     | found 0 job(s) in 20 queues
[2024-06-14 15:05:03] 2024-06-14 22:04:45,865 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-14 15:05:03] 2024-06-14 22:04:45,866 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-14 15:05:03] 2024-06-14 22:04:46,258 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-14 15:05:03] 2024-06-14 22:04:46,325 | INFO     | all data control threads have been joined
[2024-06-14 15:05:03] 2024-06-14 22:04:46,422 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-14 15:05:03] 2024-06-14 22:04:46,423 | INFO     | aborting loop
[2024-06-14 15:05:03] 2024-06-14 22:04:46,431 | INFO     | all job control threads have been joined
[2024-06-14 15:05:03] 2024-06-14 22:04:46,625 | INFO     | all payload control threads have been joined
[2024-06-14 15:05:03] 2024-06-14 22:04:46,870 | INFO     | [job] retrieve thread has finished
[2024-06-14 15:05:03] 2024-06-14 22:04:46,883 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-14 15:05:03] 2024-06-14 22:04:47,096 | INFO     | [payload] execute_payloads thread has finished
[2024-06-14 15:05:03] 2024-06-14 22:04:47,331 | INFO     | [data] control thread has finished
[2024-06-14 15:05:03] 2024-06-14 22:04:47,392 | INFO     | [job] create_data_payload thread has finished
[2024-06-14 15:05:03] 2024-06-14 22:04:47,424 | INFO     | [data] copytool_in thread has finished
[2024-06-14 15:05:03] 2024-06-14 22:04:47,427 | INFO     | [job] job monitor thread has finished
[2024-06-14 15:05:03] 2024-06-14 22:04:47,436 | INFO     | [job] control thread has finished
[2024-06-14 15:05:03] 2024-06-14 22:04:47,450 | INFO     | [job] validate thread has finished
[2024-06-14 15:05:03] 2024-06-14 22:04:47,493 | INFO     | [payload] failed_post thread has finished
[2024-06-14 15:05:03] 2024-06-14 22:04:47,540 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-14 15:05:03] 2024-06-14 22:04:47,631 | INFO     | [payload] control thread has finished
[2024-06-14 15:05:03] 2024-06-14 22:04:47,766 | INFO     | [payload] validate_pre thread has finished
[2024-06-14 15:05:03] 2024-06-14 22:04:48,196 | INFO     | [payload] validate_post thread has finished
[2024-06-14 15:05:03] 2024-06-14 22:04:48,262 | INFO     | [data] copytool_out thread has finished
[2024-06-14 15:05:03] 2024-06-14 22:04:48,546 | INFO     | [job] queue monitor thread has finished
[2024-06-14 15:05:03] 2024-06-14 22:04:50,885 | INFO     | [data] queue_monitor thread has finished
[2024-06-14 15:05:03] 2024-06-14 22:04:56,765 | INFO     | job.realtimelogging is not enabled
[2024-06-14 15:05:03] 2024-06-14 22:04:57,771 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-14 15:05:03] 2024-06-14 22:04:57,880 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140257242548032)>', '<ExcThread(monitor, started 140256938530560)>']
[2024-06-14 15:05:03] 2024-06-14 22:04:57,913 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-14 15:05:03] 2024-06-14 22:04:57,914 | INFO     | [monitor] control thread has ended
[2024-06-14 15:05:03] 2024-06-14 22:05:02,906 | INFO     | all workflow threads have been joined
[2024-06-14 15:05:03] 2024-06-14 22:05:02,907 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-14 15:05:03] 2024-06-14 22:05:02,907 | INFO     | traces error code: 0
[2024-06-14 15:05:03] 2024-06-14 22:05:02,907 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-14 15:05:03] 2024-06-14 22:05:03,028 [wrapper] ==== pilot stdout END ====
[2024-06-14 15:05:03] 2024-06-14 22:05:03,031 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-14 15:05:03] 2024-06-14 22:05:03,034 [wrapper] pilotpid: 266026
[2024-06-14 15:05:03] 2024-06-14 22:05:03,037 [wrapper] Pilot exit status: 0
[2024-06-14 15:05:03] 2024-06-14 22:05:03,050 [wrapper] pandaids: 6229577728
[2024-06-14 15:05:03] 2024-06-14 22:05:03,122 [wrapper] cleanup supervisor_pilot 249674 266027
[2024-06-14 15:05:03] 2024-06-14 22:05:03,126 [wrapper] Test setup, not cleaning
[2024-06-14 15:05:03] 2024-06-14 22:05:03,130 [wrapper] ==== wrapper stdout END ====
[2024-06-14 15:05:03] 2024-06-14 22:05:03,133 [wrapper] ==== wrapper stderr END ====
[2024-06-14 15:05:03] 2024-06-14 22:05:03,140 [wrapper] apfmon messages muted
[2024-06-14 15:05:03]  *** Error codes and diagnostics ***
[2024-06-14 15:05:03]     "exeErrorCode": 0,
[2024-06-14 15:05:03]     "exeErrorDiag": "",
[2024-06-14 15:05:03]     "pilotErrorCode": 0,
[2024-06-14 15:05:03]     "pilotErrorDiag": "",
[2024-06-14 15:05:03]  *** Listing of results directory ***
[2024-06-14 15:05:03] total 874780
[2024-06-14 15:05:03] -rw-r--r-- 1 boinc boinc    469766 Jun 13 12:04 pilot3.tar.gz
[2024-06-14 15:05:03] -rw-r--r-- 1 boinc boinc      5654 Jun 13 12:41 queuedata.json
[2024-06-14 15:05:03] -rwx------ 1 boinc boinc     32308 Jun 13 12:41 runpilot2-wrapper.sh
[2024-06-14 15:05:03] -rw-r--r-- 1 boinc boinc       100 Jun 14 11:23 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-14 15:05:03] -rwxr-xr-x 1 boinc boinc      7986 Jun 14 11:23 run_atlas
[2024-06-14 15:05:03] -rw-r--r-- 1 boinc boinc       105 Jun 14 11:23 job.xml
[2024-06-14 15:05:03] -rw-r--r-- 2 boinc boinc 542870136 Jun 14 11:23 EVNT.38776210._000778.pool.root.1
[2024-06-14 15:05:03] -rw-r--r-- 2 boinc boinc     17537 Jun 14 11:23 start_atlas.sh
[2024-06-14 15:05:03] drwxrwx--x 2 boinc boinc      4096 Jun 14 11:23 shared
[2024-06-14 15:05:03] -rw-r--r-- 2 boinc boinc    482527 Jun 14 11:23 input.tar.gz
[2024-06-14 15:05:03] -rw-r--r-- 1 boinc boinc      6628 Jun 14 11:23 init_data.xml
[2024-06-14 15:05:03] -rw-r--r-- 1 boinc boinc         0 Jun 14 11:23 boinc_lockfile
[2024-06-14 15:05:03] -rw-r--r-- 1 boinc boinc      2647 Jun 14 11:23 pandaJob.out
[2024-06-14 15:05:03] -rw------- 1 boinc boinc       424 Jun 14 11:23 setup.sh.local
[2024-06-14 15:05:03] -rw------- 1 boinc boinc   1020540 Jun 14 11:23 agis_schedconf.cvmfs.json
[2024-06-14 15:05:03] -rw------- 1 boinc boinc   1316805 Jun 14 11:23 cric_ddmendpoints.json
[2024-06-14 15:05:03] drwx------ 4 boinc boinc      4096 Jun 14 11:23 pilot3
[2024-06-14 15:05:03] -rw------- 1 boinc boinc 345951614 Jun 14 15:03 HITS.38921013._031090.pool.root.1
[2024-06-14 15:05:03] -rw-r--r-- 1 boinc boinc       533 Jun 14 15:03 boinc_task_state.xml
[2024-06-14 15:05:03] -rw------- 1 boinc boinc        95 Jun 14 15:03 pilot_heartbeat.json
[2024-06-14 15:05:03] -rw------- 1 boinc boinc      1059 Jun 14 15:04 memory_monitor_summary.json
[2024-06-14 15:05:03] -rw------- 1 boinc boinc         0 Jun 14 15:04 agis_ddmendpoints.agis.ALL.json
[2024-06-14 15:05:03] -rw------- 1 boinc boinc    458561 Jun 14 15:04 log.38921013._031090.job.log.tgz.1
[2024-06-14 15:05:03] -rw------- 1 boinc boinc      7775 Jun 14 15:04 heartbeat.json
[2024-06-14 15:05:03] -rw-r--r-- 1 boinc boinc        29 Jun 14 15:04 wrapper_checkpoint.txt
[2024-06-14 15:05:03] -rw-r--r-- 1 boinc boinc      8192 Jun 14 15:04 boinc_mmap_file
[2024-06-14 15:05:03] -rw------- 1 boinc boinc      4405 Jun 14 15:05 pilotlog.txt
[2024-06-14 15:05:03] -rw------- 1 boinc boinc   1255829 Jun 14 15:05 log.38921013._031090.job.log.1
[2024-06-14 15:05:03] -rw------- 1 boinc boinc       357 Jun 14 15:05 output.list
[2024-06-14 15:05:03] -rw-r--r-- 1 boinc boinc       620 Jun 14 15:05 runtime_log
[2024-06-14 15:05:03] -rw------- 1 boinc boinc   1730560 Jun 14 15:05 result.tar.gz
[2024-06-14 15:05:03] -rw-r--r-- 1 boinc boinc     11287 Jun 14 15:05 runtime_log.err
[2024-06-14 15:05:03] -rw------- 1 boinc boinc       656 Jun 14 15:05 0gJODmjV5b5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmIBeKDmNPzZzm.diag
[2024-06-14 15:05:03] -rw-r--r-- 1 boinc boinc     21988 Jun 14 15:05 stderr.txt
[2024-06-14 15:05:03] HITS file was successfully produced:
[2024-06-14 15:05:03] -rw------- 1 boinc boinc 345951614 Jun 14 15:03 shared/HITS.pool.root.1
[2024-06-14 15:05:03]  *** Contents of shared directory: ***
[2024-06-14 15:05:03] total 870184
[2024-06-14 15:05:03] -rw-r--r-- 2 boinc boinc 542870136 Jun 14 11:23 ATLAS.root_0
[2024-06-14 15:05:03] -rw-r--r-- 2 boinc boinc     17537 Jun 14 11:23 start_atlas.sh
[2024-06-14 15:05:03] -rw-r--r-- 2 boinc boinc    482527 Jun 14 11:23 input.tar.gz
[2024-06-14 15:05:03] -rw------- 1 boinc boinc 345951614 Jun 14 15:03 HITS.pool.root.1
[2024-06-14 15:05:03] -rw------- 1 boinc boinc   1730560 Jun 14 15:05 result.tar.gz
15:05:05 (261890): run_atlas exited; CPU time 99947.811886
15:05:05 (261890): called boinc_finish(0)

</stderr_txt>
]]>

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