Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
20:02:16 (249131): wrapper (7.7.26015): starting
20:02:16 (249131): wrapper: running run_atlas (--nthreads 12)
[2024-06-14 20:02:16] Arguments: --nthreads 12
[2024-06-14 20:02:16] Threads: 12
[2024-06-14 20:02:16] Checking for CVMFS
[2024-06-14 20:02:16] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-14 20:02:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-14 20:02:16] Running cvmfs_config stat atlas.cern.ch
[2024-06-14 20:02:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-14 20:02:24] 2.10.1.0 2817 213413 136944 133889 1 209 36419665 45568000 11755 130560 0 1153660901 99.748 750893318 17445 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2024-06-14 20:02:24] CVMFS is ok
[2024-06-14 20:02:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-14 20:02:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-14 20:02:25] Further information can be found at the LHC@home message board.
[2024-06-14 20:02:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-14 20:02:25] Checking for apptainer binary...
[2024-06-14 20:02:25] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-14 20:02:25] Running /usr/bin/apptainer --version
[2024-06-14 20:02:32] apptainer version 1.1.8-1.el7
[2024-06-14 20:02:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-14 20:02:37] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0135.triumf.lcg
[2024-06-14 20:02:37] apptainer works
[2024-06-14 20:02:37] Set ATHENA_PROC_NUMBER=12
[2024-06-14 20:02:37] Set ATHENA_CORE_NUMBER=12
[2024-06-14 20:02:38] Starting ATLAS job with PandaID=6229525918
[2024-06-14 20:02:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-15 02:43:26]  *** The last 200 lines of the pilot log: ***
[2024-06-15 02:43:26] 2024-06-15 09:43:10,349 | INFO     | intersect: -34643610855.69898
[2024-06-15 02:43:26] 2024-06-15 09:43:10,350 | INFO     | chi2: 7.426659688635312
[2024-06-15 02:43:26] 2024-06-15 09:43:10,350 | INFO     | model: linear, x: [1718421202.0, 1718421263.0, 1718421324.0, 1718421385.0, 1718421446.0, 1718421507.0, 1718421568.0, 1718421629.0, 1718421690.0, 1718421753.0, 1718
[2024-06-15 02:43:26] 2024-06-15 09:43:10,350 | INFO     | sum of square deviations: 16879524381.308735
[2024-06-15 02:43:26] 2024-06-15 09:43:10,353 | INFO     | sum of deviations: 376513819530.2874
[2024-06-15 02:43:26] 2024-06-15 09:43:10,355 | INFO     | mean x: 1718432731.298153
[2024-06-15 02:43:26] 2024-06-15 09:43:10,355 | INFO     | mean y: 2660297.696569921
[2024-06-15 02:43:26] 2024-06-15 09:43:10,356 | INFO     | -- intersect: -38328613537.44724
[2024-06-15 02:43:26] 2024-06-15 09:43:10,356 | INFO     | intersect: -38328613537.44724
[2024-06-15 02:43:26] 2024-06-15 09:43:10,356 | INFO     | chi2: 6.661377482998042
[2024-06-15 02:43:26] 2024-06-15 09:43:10,356 | INFO     | current chi2=6.661377482998042 (change=10.304527711271696 %)
[2024-06-15 02:43:26] 2024-06-15 09:43:10,356 | INFO     | right removable region: 378
[2024-06-15 02:43:26] 2024-06-15 09:43:10,357 | INFO     | model: linear, x: [1718421507.0, 1718421568.0, 1718421629.0, 1718421690.0, 1718421753.0, 1718421812.0, 1718421873.0, 1718421934.0, 1718421995.0, 1718422056.0, 1718
[2024-06-15 02:43:26] 2024-06-15 09:43:10,357 | INFO     | sum of square deviations: 16879455451.308735
[2024-06-15 02:43:26] 2024-06-15 09:43:10,360 | INFO     | sum of deviations: 241118287185.91306
[2024-06-15 02:43:26] 2024-06-15 09:43:10,360 | INFO     | mean x: 1718433036.298153
[2024-06-15 02:43:26] 2024-06-15 09:43:10,360 | INFO     | mean y: 2680670.018469657
[2024-06-15 02:43:26] 2024-06-15 09:43:10,360 | INFO     | -- intersect: -24544653309.513
[2024-06-15 02:43:26] 2024-06-15 09:43:10,360 | INFO     | intersect: -24544653309.513
[2024-06-15 02:43:26] 2024-06-15 09:43:10,360 | INFO     | chi2: 4.525443542162179
[2024-06-15 02:43:26] 2024-06-15 09:43:10,360 | INFO     | current chi2=4.525443542162179 (change=39.06488607405474 %)
[2024-06-15 02:43:26] 2024-06-15 09:43:10,361 | INFO     | model: linear, x: [1718421812.0, 1718421873.0, 1718421934.0, 1718421995.0, 1718422056.0, 1718422117.0, 1718422178.0, 1718422239.0, 1718422300.0, 1718422361.0, 1718
[2024-06-15 02:43:26] 2024-06-15 09:43:10,361 | INFO     | sum of square deviations: 16220133440.556234
[2024-06-15 02:43:26] 2024-06-15 09:43:10,363 | INFO     | sum of deviations: 148040411567.893
[2024-06-15 02:43:26] 2024-06-15 09:43:10,363 | INFO     | mean x: 1718433188.7967916
[2024-06-15 02:43:26] 2024-06-15 09:43:10,364 | INFO     | mean y: 2702206.077540107
[2024-06-15 02:43:26] 2024-06-15 09:43:10,364 | INFO     | -- intersect: -15681358437.056095
[2024-06-15 02:43:26] 2024-06-15 09:43:10,364 | INFO     | intersect: -15681358437.056095
[2024-06-15 02:43:26] 2024-06-15 09:43:10,364 | INFO     | chi2: 2.7050872147982137
[2024-06-15 02:43:26] 2024-06-15 09:43:10,364 | INFO     | current chi2=2.7050872147982137 (change=40.22492625096877 %)
[2024-06-15 02:43:26] 2024-06-15 09:43:10,364 | INFO     | model: linear, x: [1718422117.0, 1718422178.0, 1718422239.0, 1718422300.0, 1718422361.0, 1718422422.0, 1718422483.0, 1718422544.0, 1718422606.0, 1718422666.0, 1718
[2024-06-15 02:43:26] 2024-06-15 09:43:10,365 | INFO     | sum of square deviations: 15578161967.609814
[2024-06-15 02:43:26] 2024-06-15 09:43:10,367 | INFO     | sum of deviations: 60706754570.24393
[2024-06-15 02:43:26] 2024-06-15 09:43:10,367 | INFO     | mean x: 1718433341.300813
[2024-06-15 02:43:26] 2024-06-15 09:43:10,367 | INFO     | mean y: 2722933.18699187
[2024-06-15 02:43:26] 2024-06-15 09:43:10,367 | INFO     | -- intersect: -6693863693.179865
[2024-06-15 02:43:26] 2024-06-15 09:43:10,367 | INFO     | intersect: -6693863693.179865
[2024-06-15 02:43:26] 2024-06-15 09:43:10,368 | INFO     | chi2: 1.0718319707867612
[2024-06-15 02:43:26] 2024-06-15 09:43:10,368 | INFO     | current chi2=1.0718319707867612 (change=60.37717508983478 %)
[2024-06-15 02:43:26] 2024-06-15 09:43:10,368 | INFO     | model: linear, x: [1718422422.0, 1718422483.0, 1718422544.0, 1718422606.0, 1718422666.0, 1718422731.0, 1718422789.0, 1718422850.0, 1718422911.0, 1718422971.0, 1718
[2024-06-15 02:43:26] 2024-06-15 09:43:10,368 | INFO     | sum of square deviations: 14953353607.151134
[2024-06-15 02:43:26] 2024-06-15 09:43:10,371 | INFO     | sum of deviations: 28961375001.670353
[2024-06-15 02:43:26] 2024-06-15 09:43:10,371 | INFO     | mean x: 1718433493.804945
[2024-06-15 02:43:26] 2024-06-15 09:43:10,371 | INFO     | mean y: 2730675.5164835164
[2024-06-15 02:43:26] 2024-06-15 09:43:10,371 | INFO     | -- intersect: -3325499107.3808436
[2024-06-15 02:43:26] 2024-06-15 09:43:10,371 | INFO     | intersect: -3325499107.3808436
[2024-06-15 02:43:26] 2024-06-15 09:43:10,372 | INFO     | chi2: 0.8746009998861768
[2024-06-15 02:43:26] 2024-06-15 09:43:10,372 | INFO     | current chi2=0.8746009998861768 (change=18.40129575121837 %)
[2024-06-15 02:43:26] 2024-06-15 09:43:10,372 | INFO     | left removable region: 40
[2024-06-15 02:43:26] 2024-06-15 09:43:10,372 | INFO     | model: linear, x: [1718423642.0, 1718423703.0, 1718423764.0, 1718423827.0, 1718423887.0, 1718423949.0, 1718424011.0, 1718424069.0, 1718424130.0, 1718424191.0, 1718
[2024-06-15 02:43:26] 2024-06-15 09:43:10,372 | INFO     | sum of square deviations: 11972449219.798805
[2024-06-15 02:43:26] 2024-06-15 09:43:10,374 | INFO     | sum of deviations: 31612774707.875732
[2024-06-15 02:43:26] 2024-06-15 09:43:10,374 | INFO     | mean x: 1718433920.781065
[2024-06-15 02:43:26] 2024-06-15 09:43:10,374 | INFO     | mean y: 2742889.0118343197
[2024-06-15 02:43:26] 2024-06-15 09:43:10,375 | INFO     | -- intersect: -4534713348.278959
[2024-06-15 02:43:26] 2024-06-15 09:43:10,375 | INFO     | intersect: -4534713348.278959
[2024-06-15 02:43:26] 2024-06-15 09:43:10,375 | INFO     | chi2: 0.00787848269215246
[2024-06-15 02:43:26] 2024-06-15 09:43:10,375 | INFO     | -- intersect: -4534713348.278959
[2024-06-15 02:43:26] 2024-06-15 09:43:10,375 | INFO     | current memory leak: 2.64 B/s (using 338 data points, chi2=0.01)
[2024-06-15 02:43:26] 2024-06-15 09:43:10,376 | INFO     | ..............................
[2024-06-15 02:43:26] 2024-06-15 09:43:10,377 | INFO     | . Timing measurements:
[2024-06-15 02:43:26] 2024-06-15 09:43:10,377 | INFO     | . get job = 6 s
[2024-06-15 02:43:26] 2024-06-15 09:43:10,377 | INFO     | . initial setup = 37 s
[2024-06-15 02:43:26] 2024-06-15 09:43:10,377 | INFO     | . payload setup = 99 s
[2024-06-15 02:43:26] 2024-06-15 09:43:10,377 | INFO     | . stage-in = 0 s
[2024-06-15 02:43:26] 2024-06-15 09:43:10,377 | INFO     | . payload execution = 23401 s
[2024-06-15 02:43:26] 2024-06-15 09:43:10,377 | INFO     | . stage-out = 2 s
[2024-06-15 02:43:26] 2024-06-15 09:43:10,377 | INFO     | . log creation = 0 s
[2024-06-15 02:43:26] 2024-06-15 09:43:10,377 | INFO     | ..............................
[2024-06-15 02:43:26] 2024-06-15 09:43:10,449 | INFO     | 
[2024-06-15 02:43:26] 2024-06-15 09:43:10,450 | INFO     | job summary report
[2024-06-15 02:43:26] 2024-06-15 09:43:10,450 | INFO     | --------------------------------------------------
[2024-06-15 02:43:26] 2024-06-15 09:43:10,450 | INFO     | PanDA job id: 6229525918
[2024-06-15 02:43:26] 2024-06-15 09:43:10,450 | INFO     | task id: 38921013
[2024-06-15 02:43:26] 2024-06-15 09:43:10,450 | INFO     | errors: (none)
[2024-06-15 02:43:26] 2024-06-15 09:43:10,451 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-15 02:43:26] 2024-06-15 09:43:10,451 | INFO     | pilot state: finished 
[2024-06-15 02:43:26] 2024-06-15 09:43:10,451 | INFO     | transexitcode: 0
[2024-06-15 02:43:26] 2024-06-15 09:43:10,451 | INFO     | exeerrorcode: 0
[2024-06-15 02:43:26] 2024-06-15 09:43:10,451 | INFO     | exeerrordiag: 
[2024-06-15 02:43:26] 2024-06-15 09:43:10,451 | INFO     | exitcode: 0
[2024-06-15 02:43:26] 2024-06-15 09:43:10,451 | INFO     | exitmsg: OK
[2024-06-15 02:43:26] 2024-06-15 09:43:10,451 | INFO     | cpuconsumptiontime: 135238 s
[2024-06-15 02:43:26] 2024-06-15 09:43:10,451 | INFO     | nevents: 400
[2024-06-15 02:43:26] 2024-06-15 09:43:10,452 | INFO     | neventsw: 0
[2024-06-15 02:43:26] 2024-06-15 09:43:10,452 | INFO     | pid: 4470
[2024-06-15 02:43:26] 2024-06-15 09:43:10,452 | INFO     | pgrp: 4470
[2024-06-15 02:43:26] 2024-06-15 09:43:10,452 | INFO     | corecount: 12
[2024-06-15 02:43:26] 2024-06-15 09:43:10,452 | INFO     | event service: False
[2024-06-15 02:43:26] 2024-06-15 09:43:10,452 | INFO     | sizes: {0: 2377524, 7: 2378122, 8: 2378886, 9: 2379113, 22: 2379113, 36: 2379141, 50: 2379297, 61: 2379325, 74: 2379353, 85: 2379381, 90: 2379615, 101: 2379923, 23
[2024-06-15 02:43:26] 2024-06-15 09:43:10,452 | INFO     | --------------------------------------------------
[2024-06-15 02:43:26] 2024-06-15 09:43:10,452 | INFO     | 
[2024-06-15 02:43:26] 2024-06-15 09:43:10,453 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-06-15 02:43:26] 2024-06-15 09:43:10,486 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-15 02:43:26] 2024-06-15 09:43:10,486 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-15 02:43:26] 2024-06-15 09:43:10,486 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-15 02:43:26] 2024-06-15 09:43:10,486 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-15 02:43:26] 2024-06-15 09:43:10,486 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-15 02:43:26] 2024-06-15 09:43:10,486 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-15 02:43:26] 2024-06-15 09:43:10,487 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-15 02:43:26] 2024-06-15 09:43:10,487 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-15 02:43:26] 2024-06-15 09:43:10,487 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-15 02:43:26] 2024-06-15 09:43:10,487 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-15 02:43:26] 2024-06-15 09:43:10,487 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-15 02:43:26] 2024-06-15 09:43:10,487 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-15 02:43:26] 2024-06-15 09:43:10,487 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-15 02:43:26] 2024-06-15 09:43:10,487 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-15 02:43:26] 2024-06-15 09:43:10,487 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-15 02:43:26] 2024-06-15 09:43:10,487 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-15 02:43:26] 2024-06-15 09:43:10,487 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-15 02:43:26] 2024-06-15 09:43:10,488 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-15 02:43:26] 2024-06-15 09:43:10,488 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-15 02:43:26] 2024-06-15 09:43:10,488 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-15 02:43:26] 2024-06-15 09:43:10,488 | INFO     | job 6229525918 has completed (purged errors)
[2024-06-15 02:43:26] 2024-06-15 09:43:10,488 | INFO     | overall cleanup function is called
[2024-06-15 02:43:26] 2024-06-15 09:43:11,497 | INFO     | --- collectZombieJob: --- 10, [4470]
[2024-06-15 02:43:26] 2024-06-15 09:43:11,497 | INFO     | zombie collector waiting for pid 4470
[2024-06-15 02:43:26] 2024-06-15 09:43:11,498 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-15 02:43:26] 2024-06-15 09:43:12,502 | INFO     | collected zombie processes
[2024-06-15 02:43:26] 2024-06-15 09:43:12,503 | INFO     | will now attempt to kill all subprocesses of pid=4470
[2024-06-15 02:43:26] 2024-06-15 09:43:12,617 | INFO     | process IDs to be killed: [4470] (in reverse order)
[2024-06-15 02:43:26] 2024-06-15 09:43:12,707 | WARNING  | found no corresponding commands to process id(s)
[2024-06-15 02:43:26] 2024-06-15 09:43:12,709 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-15 02:43:26] 2024-06-15 09:43:12,717 | INFO     | did not find any defunct processes belonging to 4470
[2024-06-15 02:43:26] 2024-06-15 09:43:12,722 | INFO     | did not find any defunct processes belonging to 4470
[2024-06-15 02:43:26] 2024-06-15 09:43:12,723 | INFO     | ready for new job
[2024-06-15 02:43:26] 2024-06-15 09:43:12,723 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-15 02:43:26] 2024-06-15 09:43:12,726 | INFO     | *************************************
[2024-06-15 02:43:26] 2024-06-15 09:43:12,726 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-15 02:43:26] 2024-06-15 09:43:12,726 | INFO     | *************************************
[2024-06-15 02:43:26] 2024-06-15 09:43:12,726 | INFO     | 
[2024-06-15 02:43:26] 2024-06-15 09:43:12,729 | INFO     | architecture information:
[2024-06-15 02:43:26] 2024-06-15 09:43:12,730 | INFO     | executing command: cat /etc/os-release
[2024-06-15 02:43:26] 2024-06-15 09:43:12,753 | INFO     | cat /etc/os-release:
[2024-06-15 02:43:26] NAME="CentOS Linux"
[2024-06-15 02:43:26] VERSION="7 (Core)"
[2024-06-15 02:43:26] ID="centos"
[2024-06-15 02:43:26] ID_LIKE="rhel fedora"
[2024-06-15 02:43:26] VERSION_ID="7"
[2024-06-15 02:43:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-15 02:43:26] ANSI_COLOR="0;31"
[2024-06-15 02:43:26] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-15 02:43:26] HOME_URL="https://www.centos.org/"
[2024-06-15 02:43:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-15 02:43:26] 
[2024-06-15 02:43:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-15 02:43:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-15 02:43:26] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-15 02:43:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-15 02:43:26] 
[2024-06-15 02:43:26] 2024-06-15 09:43:12,753 | INFO     | *************************************
[2024-06-15 02:43:26] 2024-06-15 09:43:13,256 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-06-15 02:43:26] 2024-06-15 09:43:13,282 | INFO     | sufficient remaining disk space (2148239671296 B)
[2024-06-15 02:43:26] 2024-06-15 09:43:13,283 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-15 02:43:26] 2024-06-15 09:43:13,283 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-15 02:43:26] 2024-06-15 09:43:13,284 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-15 02:43:26] 2024-06-15 09:43:13,284 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-15 02:43:26] 2024-06-15 09:43:13,285 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-15 02:43:26] 2024-06-15 09:43:13,285 | INFO     | aborting loop
[2024-06-15 02:43:26] 2024-06-15 09:43:13,286 | INFO     | found 0 job(s) in 20 queues
[2024-06-15 02:43:26] 2024-06-15 09:43:13,286 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-15 02:43:26] 2024-06-15 09:43:13,286 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-15 02:43:26] 2024-06-15 09:43:13,568 | INFO     | all data control threads have been joined
[2024-06-15 02:43:26] 2024-06-15 09:43:13,878 | INFO     | all job control threads have been joined
[2024-06-15 02:43:26] 2024-06-15 09:43:14,184 | INFO     | all payload control threads have been joined
[2024-06-15 02:43:26] 2024-06-15 09:43:14,289 | INFO     | [job] retrieve thread has finished
[2024-06-15 02:43:26] 2024-06-15 09:43:14,291 | INFO     | [job] job monitor thread has finished
[2024-06-15 02:43:26] 2024-06-15 09:43:14,365 | INFO     | [job] create_data_payload thread has finished
[2024-06-15 02:43:26] 2024-06-15 09:43:14,385 | INFO     | [data] copytool_in thread has finished
[2024-06-15 02:43:26] 2024-06-15 09:43:14,515 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-15 02:43:26] 2024-06-15 09:43:14,570 | INFO     | [data] control thread has finished
[2024-06-15 02:43:26] 2024-06-15 09:43:14,613 | INFO     | [payload] validate_post thread has finished
[2024-06-15 02:43:26] 2024-06-15 09:43:14,879 | INFO     | [job] control thread has finished
[2024-06-15 02:43:26] 2024-06-15 09:43:14,998 | INFO     | [payload] execute_payloads thread has finished
[2024-06-15 02:43:26] 2024-06-15 09:43:15,142 | INFO     | [payload] validate_pre thread has finished
[2024-06-15 02:43:26] 2024-06-15 09:43:15,190 | INFO     | [payload] control thread has finished
[2024-06-15 02:43:26] 2024-06-15 09:43:15,287 | INFO     | [data] copytool_out thread has finished
[2024-06-15 02:43:26] 2024-06-15 09:43:15,452 | INFO     | [job] validate thread has finished
[2024-06-15 02:43:26] 2024-06-15 09:43:15,458 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-15 02:43:26] 2024-06-15 09:43:15,525 | INFO     | [payload] failed_post thread has finished
[2024-06-15 02:43:26] 2024-06-15 09:43:16,303 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-15 02:43:26] 2024-06-15 09:43:16,459 | INFO     | [job] queue monitor thread has finished
[2024-06-15 02:43:26] 2024-06-15 09:43:20,307 | INFO     | [data] queue_monitor thread has finished
[2024-06-15 02:43:26] 2024-06-15 09:43:20,578 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140383037945664)>', '<ExcThread(monitor, started 140382599894784)>']
[2024-06-15 02:43:26] 2024-06-15 09:43:21,322 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-15 02:43:26] 2024-06-15 09:43:21,323 | INFO     | [monitor] control thread has ended
[2024-06-15 02:43:26] 2024-06-15 09:43:25,603 | INFO     | all workflow threads have been joined
[2024-06-15 02:43:26] 2024-06-15 09:43:25,604 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-15 02:43:26] 2024-06-15 09:43:25,604 | INFO     | traces error code: 0
[2024-06-15 02:43:26] 2024-06-15 09:43:25,605 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-15 02:43:26] 2024-06-15 09:43:25,721 [wrapper] ==== pilot stdout END ====
[2024-06-15 02:43:26] 2024-06-15 09:43:25,725 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-15 02:43:26] 2024-06-15 09:43:25,730 [wrapper] pilotpid: 264093
[2024-06-15 02:43:26] 2024-06-15 09:43:25,734 [wrapper] Pilot exit status: 0
[2024-06-15 02:43:26] 2024-06-15 09:43:25,747 [wrapper] pandaids: 6229525918
[2024-06-15 02:43:26] 2024-06-15 09:43:25,807 [wrapper] cleanup supervisor_pilot 104643 264094
[2024-06-15 02:43:26] 2024-06-15 09:43:25,812 [wrapper] Test setup, not cleaning
[2024-06-15 02:43:26] 2024-06-15 09:43:25,816 [wrapper] ==== wrapper stdout END ====
[2024-06-15 02:43:26] 2024-06-15 09:43:25,821 [wrapper] ==== wrapper stderr END ====
[2024-06-15 02:43:26] 2024-06-15 09:43:25,829 [wrapper] apfmon messages muted
[2024-06-15 02:43:26]  *** Error codes and diagnostics ***
[2024-06-15 02:43:26]     "exeErrorCode": 0,
[2024-06-15 02:43:26]     "exeErrorDiag": "",
[2024-06-15 02:43:26]     "pilotErrorCode": 0,
[2024-06-15 02:43:26]     "pilotErrorDiag": "",
[2024-06-15 02:43:26]  *** Listing of results directory ***
[2024-06-15 02:43:26] total 884720
[2024-06-15 02:43:26] -rw-r--r-- 1 boinc boinc    469766 Jun 13 10:05 pilot3.tar.gz
[2024-06-15 02:43:26] -rw-r--r-- 1 boinc boinc      5654 Jun 13 10:38 queuedata.json
[2024-06-15 02:43:26] -rwx------ 1 boinc boinc     32308 Jun 13 10:38 runpilot2-wrapper.sh
[2024-06-15 02:43:26] -rw-r--r-- 1 boinc boinc       100 Jun 14 20:01 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-15 02:43:26] -rwxr-xr-x 1 boinc boinc      7986 Jun 14 20:01 run_atlas
[2024-06-15 02:43:26] -rw-r--r-- 1 boinc boinc       105 Jun 14 20:01 job.xml
[2024-06-15 02:43:26] -rw-r--r-- 1 boinc boinc      6624 Jun 14 20:02 init_data.xml
[2024-06-15 02:43:26] -rw-r--r-- 2 boinc boinc 543669521 Jun 14 20:02 EVNT.38776210._000759.pool.root.1
[2024-06-15 02:43:26] drwxrwx--x 2 boinc boinc      4096 Jun 14 20:02 shared
[2024-06-15 02:43:26] -rw-r--r-- 2 boinc boinc    482522 Jun 14 20:02 input.tar.gz
[2024-06-15 02:43:26] -rw-r--r-- 2 boinc boinc     17537 Jun 14 20:02 start_atlas.sh
[2024-06-15 02:43:26] -rw-r--r-- 1 boinc boinc         0 Jun 14 20:02 boinc_lockfile
[2024-06-15 02:43:26] -rw-r--r-- 1 boinc boinc      2647 Jun 14 20:02 pandaJob.out
[2024-06-15 02:43:26] -rw------- 1 boinc boinc       424 Jun 14 20:02 setup.sh.local
[2024-06-15 02:43:26] -rw------- 1 boinc boinc   1020845 Jun 14 20:06 agis_schedconf.cvmfs.json
[2024-06-15 02:43:26] -rw------- 1 boinc boinc   1316805 Jun 14 20:06 cric_ddmendpoints.json
[2024-06-15 02:43:26] drwx------ 4 boinc boinc      4096 Jun 14 20:07 pilot3
[2024-06-15 02:43:26] -rw------- 1 boinc boinc 352875844 Jun 15 02:42 HITS.38921013._030601.pool.root.1
[2024-06-15 02:43:26] -rw-r--r-- 1 boinc boinc       533 Jun 15 02:42 boinc_task_state.xml
[2024-06-15 02:43:26] -rw------- 1 boinc boinc        95 Jun 15 02:42 pilot_heartbeat.json
[2024-06-15 02:43:26] -rw------- 1 boinc boinc      1057 Jun 15 02:42 memory_monitor_summary.json
[2024-06-15 02:43:26] -rw------- 1 boinc boinc         0 Jun 15 02:43 agis_ddmendpoints.agis.ALL.json
[2024-06-15 02:43:26] -rw------- 1 boinc boinc    569140 Jun 15 02:43 log.38921013._030601.job.log.tgz.1
[2024-06-15 02:43:26] -rw-r--r-- 1 boinc boinc        29 Jun 15 02:43 wrapper_checkpoint.txt
[2024-06-15 02:43:26] -rw-r--r-- 1 boinc boinc      8192 Jun 15 02:43 boinc_mmap_file
[2024-06-15 02:43:26] -rw------- 1 boinc boinc      7778 Jun 15 02:43 heartbeat.json
[2024-06-15 02:43:26] -rw------- 1 boinc boinc      4333 Jun 15 02:43 pilotlog.txt
[2024-06-15 02:43:26] -rw------- 1 boinc boinc   2369864 Jun 15 02:43 log.38921013._030601.job.log.1
[2024-06-15 02:43:26] -rw------- 1 boinc boinc       357 Jun 15 02:43 output.list
[2024-06-15 02:43:26] -rw-r--r-- 1 boinc boinc       620 Jun 15 02:43 runtime_log
[2024-06-15 02:43:26] -rw------- 1 boinc boinc   2959360 Jun 15 02:43 result.tar.gz
[2024-06-15 02:43:26] -rw------- 1 boinc boinc       660 Jun 15 02:43 cF5NDmHa3b5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmx4dKDmE8nGAn.diag
[2024-06-15 02:43:26] -rw-r--r-- 1 boinc boinc     11287 Jun 15 02:43 runtime_log.err
[2024-06-15 02:43:26] -rw-r--r-- 1 boinc boinc     21968 Jun 15 02:43 stderr.txt
[2024-06-15 02:43:26] HITS file was successfully produced:
[2024-06-15 02:43:26] -rw------- 1 boinc boinc 352875844 Jun 15 02:42 shared/HITS.pool.root.1
[2024-06-15 02:43:26]  *** Contents of shared directory: ***
[2024-06-15 02:43:26] total 878928
[2024-06-15 02:43:26] -rw-r--r-- 2 boinc boinc 543669521 Jun 14 20:02 ATLAS.root_0
[2024-06-15 02:43:26] -rw-r--r-- 2 boinc boinc    482522 Jun 14 20:02 input.tar.gz
[2024-06-15 02:43:26] -rw-r--r-- 2 boinc boinc     17537 Jun 14 20:02 start_atlas.sh
[2024-06-15 02:43:26] -rw------- 1 boinc boinc 352875844 Jun 15 02:42 HITS.pool.root.1
[2024-06-15 02:43:26] -rw------- 1 boinc boinc   2959360 Jun 15 02:43 result.tar.gz
02:43:28 (249131): run_atlas exited; CPU time 134562.539471
02:43:28 (249131): called boinc_finish(0)

</stderr_txt>
]]>

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