Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:56:40 (89547): wrapper (7.7.26015): starting
18:56:40 (89547): wrapper: running run_atlas (--nthreads 8)
[2024-06-13 18:56:40] Arguments: --nthreads 8
[2024-06-13 18:56:40] Threads: 8
[2024-06-13 18:56:40] Checking for CVMFS
[2024-06-13 18:56:40] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-13 18:56:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-13 18:56:41] Running cvmfs_config stat atlas.cern.ch
[2024-06-13 18:56:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-13 18:56:41] 2.11.2.0 84859 3028 164180 133848 1 481 16035990 18432001 12464 130560 0 18724248 99.463 18626467 52685 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-06-13 18:56:41] CVMFS is ok
[2024-06-13 18:56:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-13 18:56:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-13 18:56:41] Further information can be found at the LHC@home message board.
[2024-06-13 18:56:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-13 18:56:41] Checking for apptainer binary...
[2024-06-13 18:56:41] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-13 18:56:41] Running /usr/bin/apptainer --version
[2024-06-13 18:56:41] apptainer version 1.3.1-1.el7
[2024-06-13 18:56:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-13 18:56:41] c-212-2.aglt2.org
[2024-06-13 18:56:41] apptainer works
[2024-06-13 18:56:41] Set ATHENA_PROC_NUMBER=8
[2024-06-13 18:56:41] Set ATHENA_CORE_NUMBER=8
[2024-06-13 18:56:41] Starting ATLAS job with PandaID=6229525891
[2024-06-13 18:56:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-14 09:02:38]  *** The last 200 lines of the pilot log: ***
[2024-06-14 09:02:38] 2024-06-14 13:02:13,139 | INFO     | stage-out finished correctly
[2024-06-14 09:02:38] 2024-06-14 13:02:13,407 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-06-14 09:02:38] 2024-06-14 13:02:15,780 | INFO     | job 6229525891 has state=finished
[2024-06-14 09:02:38] 2024-06-14 13:02:15,780 | INFO     | preparing for final server update for job 6229525891 in state='finished'
[2024-06-14 09:02:38] 2024-06-14 13:02:15,781 | INFO     | this job has now completed (state=finished)
[2024-06-14 09:02:38] 2024-06-14 13:02:15,781 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-06-14 09:02:38] 2024-06-14 13:02:15,781 | INFO     | job 6229525891 has finished - writing final server update
[2024-06-14 09:02:38] 2024-06-14 13:02:15,781 | INFO     | total number of processed events: 400 (read)
[2024-06-14 09:02:38] 2024-06-14 13:02:15,786 | INFO     | executing command: lscpu
[2024-06-14 09:02:38] 2024-06-14 13:02:15,850 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-06-14 09:02:38] 2024-06-14 13:02:15,850 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-06-14 09:02:38] 2024-06-14 13:02:15,892 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-06-14 09:02:38] 2024-06-14 13:02:23,572 | INFO     | CPU arch script returned: x86-64-v3
[2024-06-14 09:02:38] 2024-06-14 13:02:23,572 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6229525891/memory_monitor_summary.json (trf name=prmon)
[2024-06-14 09:02:38] 2024-06-14 13:02:23,575 | INFO     | extracted standard info from prmon json
[2024-06-14 09:02:38] 2024-06-14 13:02:23,575 | INFO     | extracted standard memory fields from prmon json
[2024-06-14 09:02:38] 2024-06-14 13:02:23,575 | WARNING  | GPU info not found in prmon json
[2024-06-14 09:02:38] 2024-06-14 13:02:23,576 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-14 09:02:38] 2024-06-14 13:02:23,576 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-14 09:02:38] 2024-06-14 13:02:23,583 | INFO     | fitting pss+swap vs Time
[2024-06-14 09:02:38] 2024-06-14 13:02:23,584 | INFO     | model: linear, x: [1718319435.0, 1718319496.0, 1718319557.0, 1718319618.0, 1718319679.0, 1718319740.0, 1718319801.0, 1718319862.0, 1718319923.0, 1718319984.0, 1718
[2024-06-14 09:02:38] 2024-06-14 13:02:23,584 | INFO     | sum of square deviations: 178587733386.22006
[2024-06-14 09:02:38] 2024-06-14 13:02:23,591 | INFO     | sum of deviations: 1690342531243.085
[2024-06-14 09:02:38] 2024-06-14 13:02:23,591 | INFO     | mean x: 1718344780.6189904
[2024-06-14 09:02:38] 2024-06-14 13:02:23,591 | INFO     | mean y: 2470503.7920673075
[2024-06-14 09:02:38] 2024-06-14 13:02:23,591 | INFO     | -- intersect: -16261755548.835398
[2024-06-14 09:02:38] 2024-06-14 13:02:23,591 | INFO     | intersect: -16261755548.835398
[2024-06-14 09:02:38] 2024-06-14 13:02:23,592 | INFO     | chi2: 17.62341629259736
[2024-06-14 09:02:38] 2024-06-14 13:02:23,592 | INFO     | model: linear, x: [1718319435.0, 1718319496.0, 1718319557.0, 1718319618.0, 1718319679.0, 1718319740.0, 1718319801.0, 1718319862.0, 1718319923.0, 1718319984.0, 1718
[2024-06-14 09:02:38] 2024-06-14 13:02:23,592 | INFO     | sum of square deviations: 175387368691.14886
[2024-06-14 09:02:38] 2024-06-14 13:02:23,599 | INFO     | sum of deviations: 1737490215410.6252
[2024-06-14 09:02:38] 2024-06-14 13:02:23,599 | INFO     | mean x: 1718344628.1197097
[2024-06-14 09:02:38] 2024-06-14 13:02:23,599 | INFO     | mean y: 2472736.9431680776
[2024-06-14 09:02:38] 2024-06-14 13:02:23,599 | INFO     | -- intersect: -17020457707.488987
[2024-06-14 09:02:38] 2024-06-14 13:02:23,599 | INFO     | intersect: -17020457707.488987
[2024-06-14 09:02:38] 2024-06-14 13:02:23,600 | INFO     | chi2: 16.839585997255863
[2024-06-14 09:02:38] 2024-06-14 13:02:23,600 | INFO     | current chi2=16.839585997255863 (change=4.447663735156389 %)
[2024-06-14 09:02:38] 2024-06-14 13:02:23,600 | INFO     | right removable region: 826
[2024-06-14 09:02:38] 2024-06-14 13:02:23,600 | INFO     | model: linear, x: [1718319740.0, 1718319801.0, 1718319862.0, 1718319923.0, 1718319984.0, 1718320045.0, 1718320106.0, 1718320167.0, 1718320228.0, 1718320289.0, 1718
[2024-06-14 09:02:38] 2024-06-14 13:02:23,600 | INFO     | sum of square deviations: 175387308301.14893
[2024-06-14 09:02:38] 2024-06-14 13:02:23,607 | INFO     | sum of deviations: 1435098694610.3618
[2024-06-14 09:02:38] 2024-06-14 13:02:23,607 | INFO     | mean x: 1718344933.1197097
[2024-06-14 09:02:38] 2024-06-14 13:02:23,607 | INFO     | mean y: 2482660.1680773883
[2024-06-14 09:02:38] 2024-06-14 13:02:23,607 | INFO     | -- intersect: -14057796811.002018
[2024-06-14 09:02:38] 2024-06-14 13:02:23,607 | INFO     | intersect: -14057796811.002018
[2024-06-14 09:02:38] 2024-06-14 13:02:23,608 | INFO     | chi2: 13.933568196828885
[2024-06-14 09:02:38] 2024-06-14 13:02:23,608 | INFO     | current chi2=13.933568196828885 (change=20.937189671439462 %)
[2024-06-14 09:02:38] 2024-06-14 13:02:23,608 | INFO     | left removable region: 10
[2024-06-14 09:02:38] 2024-06-14 13:02:23,608 | INFO     | model: linear, x: [1718320045.0, 1718320106.0, 1718320167.0, 1718320228.0, 1718320289.0, 1718320350.0, 1718320411.0, 1718320472.0, 1718320533.0, 1718320594.0, 1718
[2024-06-14 09:02:38] 2024-06-14 13:02:23,608 | INFO     | sum of square deviations: 168481517881.98868
[2024-06-14 09:02:38] 2024-06-14 13:02:23,615 | INFO     | sum of deviations: 1273990649495.341
[2024-06-14 09:02:38] 2024-06-14 13:02:23,616 | INFO     | mean x: 1718344902.6213236
[2024-06-14 09:02:38] 2024-06-14 13:02:23,616 | INFO     | mean y: 2495037.7389705884
[2024-06-14 09:02:38] 2024-06-14 13:02:23,616 | INFO     | -- intersect: -12990949976.69236
[2024-06-14 09:02:38] 2024-06-14 13:02:23,616 | INFO     | intersect: -12990949976.69236
[2024-06-14 09:02:38] 2024-06-14 13:02:23,616 | INFO     | chi2: 10.814239456541832
[2024-06-14 09:02:38] 2024-06-14 13:02:23,617 | INFO     | -- intersect: -12990949976.69236
[2024-06-14 09:02:38] 2024-06-14 13:02:23,617 | INFO     | current memory leak: 7.56 B/s (using 816 data points, chi2=10.81)
[2024-06-14 09:02:38] 2024-06-14 13:02:23,617 | INFO     | ..............................
[2024-06-14 09:02:38] 2024-06-14 13:02:23,618 | INFO     | . Timing measurements:
[2024-06-14 09:02:38] 2024-06-14 13:02:23,618 | INFO     | . get job = 0 s
[2024-06-14 09:02:38] 2024-06-14 13:02:23,618 | INFO     | . initial setup = 2 s
[2024-06-14 09:02:38] 2024-06-14 13:02:23,618 | INFO     | . payload setup = 5 s
[2024-06-14 09:02:38] 2024-06-14 13:02:23,618 | INFO     | . stage-in = 0 s
[2024-06-14 09:02:38] 2024-06-14 13:02:23,618 | INFO     | . payload execution = 50697 s
[2024-06-14 09:02:38] 2024-06-14 13:02:23,618 | INFO     | . stage-out = 1 s
[2024-06-14 09:02:38] 2024-06-14 13:02:23,618 | INFO     | . log creation = 0 s
[2024-06-14 09:02:38] 2024-06-14 13:02:23,618 | INFO     | ..............................
[2024-06-14 09:02:38] 2024-06-14 13:02:23,704 | WARNING  | process 5975 is no longer using CPU - aborting
[2024-06-14 09:02:38] 2024-06-14 13:02:23,704 | INFO     | aborting job monitoring since job object (job id=6229525891) has expired
[2024-06-14 09:02:38] 2024-06-14 13:02:23,716 | INFO     | 
[2024-06-14 09:02:38] 2024-06-14 13:02:23,716 | INFO     | job summary report
[2024-06-14 09:02:38] 2024-06-14 13:02:23,716 | INFO     | --------------------------------------------------
[2024-06-14 09:02:38] 2024-06-14 13:02:23,716 | INFO     | PanDA job id: 6229525891
[2024-06-14 09:02:38] 2024-06-14 13:02:23,716 | INFO     | task id: 38921013
[2024-06-14 09:02:38] 2024-06-14 13:02:23,716 | INFO     | errors: (none)
[2024-06-14 09:02:38] 2024-06-14 13:02:23,717 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-14 09:02:38] 2024-06-14 13:02:23,717 | INFO     | pilot state: finished 
[2024-06-14 09:02:38] 2024-06-14 13:02:23,717 | INFO     | transexitcode: 0
[2024-06-14 09:02:38] 2024-06-14 13:02:23,717 | INFO     | exeerrorcode: 0
[2024-06-14 09:02:38] 2024-06-14 13:02:23,717 | INFO     | exeerrordiag: 
[2024-06-14 09:02:38] 2024-06-14 13:02:23,717 | INFO     | exitcode: 0
[2024-06-14 09:02:38] 2024-06-14 13:02:23,717 | INFO     | exitmsg: OK
[2024-06-14 09:02:38] 2024-06-14 13:02:23,717 | INFO     | cpuconsumptiontime: 143954 s
[2024-06-14 09:02:38] 2024-06-14 13:02:23,717 | INFO     | nevents: 400
[2024-06-14 09:02:38] 2024-06-14 13:02:23,717 | INFO     | neventsw: 0
[2024-06-14 09:02:38] 2024-06-14 13:02:23,717 | INFO     | pid: 5975
[2024-06-14 09:02:38] 2024-06-14 13:02:23,717 | INFO     | pgrp: 5975
[2024-06-14 09:02:38] 2024-06-14 13:02:23,717 | INFO     | corecount: 8
[2024-06-14 09:02:38] 2024-06-14 13:02:23,718 | INFO     | event service: False
[2024-06-14 09:02:38] 2024-06-14 13:02:23,718 | INFO     | sizes: {0: 2377509, 1: 2379045, 4: 2379251, 11: 2379279, 50705: 2426307, 50708: 2435451, 50718: 2435565}
[2024-06-14 09:02:38] 2024-06-14 13:02:23,718 | INFO     | --------------------------------------------------
[2024-06-14 09:02:38] 2024-06-14 13:02:23,718 | INFO     | 
[2024-06-14 09:02:38] 2024-06-14 13:02:23,718 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2024-06-14 09:02:38] 2024-06-14 13:02:23,742 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-14 09:02:38] 2024-06-14 13:02:23,742 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-14 09:02:38] 2024-06-14 13:02:23,742 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-14 09:02:38] 2024-06-14 13:02:23,742 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-14 09:02:38] 2024-06-14 13:02:23,742 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-14 09:02:38] 2024-06-14 13:02:23,742 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-14 09:02:38] 2024-06-14 13:02:23,742 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-14 09:02:38] 2024-06-14 13:02:23,743 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-14 09:02:38] 2024-06-14 13:02:23,743 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-14 09:02:38] 2024-06-14 13:02:23,743 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-14 09:02:38] 2024-06-14 13:02:23,743 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-14 09:02:38] 2024-06-14 13:02:23,743 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-14 09:02:38] 2024-06-14 13:02:23,743 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-14 09:02:38] 2024-06-14 13:02:23,743 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-14 09:02:38] 2024-06-14 13:02:23,743 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-14 09:02:38] 2024-06-14 13:02:23,743 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-14 09:02:38] 2024-06-14 13:02:23,743 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-14 09:02:38] 2024-06-14 13:02:23,743 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-14 09:02:38] 2024-06-14 13:02:23,743 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-14 09:02:38] 2024-06-14 13:02:23,743 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-14 09:02:38] 2024-06-14 13:02:23,744 | INFO     | job 6229525891 has completed (purged errors)
[2024-06-14 09:02:38] 2024-06-14 13:02:23,744 | INFO     | overall cleanup function is called
[2024-06-14 09:02:38] 2024-06-14 13:02:24,751 | INFO     | --- collectZombieJob: --- 10, [5975]
[2024-06-14 09:02:38] 2024-06-14 13:02:24,751 | INFO     | zombie collector waiting for pid 5975
[2024-06-14 09:02:38] 2024-06-14 13:02:24,752 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-14 09:02:38] 2024-06-14 13:02:25,757 | INFO     | collected zombie processes
[2024-06-14 09:02:38] 2024-06-14 13:02:25,757 | INFO     | will now attempt to kill all subprocesses of pid=5975
[2024-06-14 09:02:38] 2024-06-14 13:02:25,936 | INFO     | process IDs to be killed: [5975] (in reverse order)
[2024-06-14 09:02:38] 2024-06-14 13:02:26,041 | WARNING  | found no corresponding commands to process id(s)
[2024-06-14 09:02:38] 2024-06-14 13:02:26,041 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-14 09:02:38] 2024-06-14 13:02:26,050 | INFO     | did not find any defunct processes belonging to 5975
[2024-06-14 09:02:38] 2024-06-14 13:02:26,057 | INFO     | did not find any defunct processes belonging to 5975
[2024-06-14 09:02:38] 2024-06-14 13:02:26,057 | INFO     | ready for new job
[2024-06-14 09:02:38] 2024-06-14 13:02:26,057 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-14 09:02:38] 2024-06-14 13:02:26,061 | INFO     | *************************************
[2024-06-14 09:02:38] 2024-06-14 13:02:26,061 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-14 09:02:38] 2024-06-14 13:02:26,061 | INFO     | *************************************
[2024-06-14 09:02:38] 2024-06-14 13:02:26,061 | INFO     | 
[2024-06-14 09:02:38] 2024-06-14 13:02:26,065 | INFO     | architecture information:
[2024-06-14 09:02:38] 2024-06-14 13:02:26,066 | INFO     | executing command: cat /etc/os-release
[2024-06-14 09:02:38] 2024-06-14 13:02:26,097 | INFO     | cat /etc/os-release:
[2024-06-14 09:02:38] NAME="CentOS Linux"
[2024-06-14 09:02:38] VERSION="7 (Core)"
[2024-06-14 09:02:38] ID="centos"
[2024-06-14 09:02:38] ID_LIKE="rhel fedora"
[2024-06-14 09:02:38] VERSION_ID="7"
[2024-06-14 09:02:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-14 09:02:38] ANSI_COLOR="0;31"
[2024-06-14 09:02:38] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-14 09:02:38] HOME_URL="https://www.centos.org/"
[2024-06-14 09:02:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-14 09:02:38] 
[2024-06-14 09:02:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-14 09:02:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-14 09:02:38] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-14 09:02:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-14 09:02:38] 
[2024-06-14 09:02:38] 2024-06-14 13:02:26,097 | INFO     | *************************************
[2024-06-14 09:02:38] 2024-06-14 13:02:26,600 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2024-06-14 09:02:38] 2024-06-14 13:02:26,626 | INFO     | sufficient remaining disk space (96260325376 B)
[2024-06-14 09:02:38] 2024-06-14 13:02:26,626 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-14 09:02:38] 2024-06-14 13:02:26,626 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-14 09:02:38] 2024-06-14 13:02:26,627 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-14 09:02:38] 2024-06-14 13:02:27,127 | INFO     | all payload control threads have been joined
[2024-06-14 09:02:38] 2024-06-14 13:02:27,213 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-14 09:02:38] 2024-06-14 13:02:27,214 | INFO     | aborting loop
[2024-06-14 09:02:38] 2024-06-14 13:02:27,308 | INFO     | found 0 job(s) in 20 queues
[2024-06-14 09:02:38] 2024-06-14 13:02:27,308 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-14 09:02:38] 2024-06-14 13:02:27,309 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-14 09:02:38] 2024-06-14 13:02:27,557 | INFO     | all job control threads have been joined
[2024-06-14 09:02:38] 2024-06-14 13:02:27,631 | INFO     | [job] retrieve thread has finished
[2024-06-14 09:02:38] 2024-06-14 13:02:27,657 | INFO     | all data control threads have been joined
[2024-06-14 09:02:38] 2024-06-14 13:02:27,707 | INFO     | [data] copytool_in thread has finished
[2024-06-14 09:02:38] 2024-06-14 13:02:27,715 | INFO     | [payload] validate_post thread has finished
[2024-06-14 09:02:38] 2024-06-14 13:02:27,824 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-14 09:02:38] 2024-06-14 13:02:27,982 | INFO     | [payload] validate_pre thread has finished
[2024-06-14 09:02:38] 2024-06-14 13:02:28,133 | INFO     | [payload] control thread has finished
[2024-06-14 09:02:38] 2024-06-14 13:02:28,145 | INFO     | [payload] execute_payloads thread has finished
[2024-06-14 09:02:38] 2024-06-14 13:02:28,219 | INFO     | [job] job monitor thread has finished
[2024-06-14 09:02:38] 2024-06-14 13:02:28,476 | INFO     | [payload] failed_post thread has finished
[2024-06-14 09:02:38] 2024-06-14 13:02:28,499 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-14 09:02:38] 2024-06-14 13:02:28,563 | INFO     | [job] control thread has finished
[2024-06-14 09:02:38] 2024-06-14 13:02:28,571 | INFO     | [job] create_data_payload thread has finished
[2024-06-14 09:02:38] 2024-06-14 13:02:28,632 | INFO     | [data] copytool_out thread has finished
[2024-06-14 09:02:38] 2024-06-14 13:02:28,663 | INFO     | [data] control thread has finished
[2024-06-14 09:02:38] 2024-06-14 13:02:28,730 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-14 09:02:38] 2024-06-14 13:02:28,930 | INFO     | [job] validate thread has finished
[2024-06-14 09:02:38] 2024-06-14 13:02:29,736 | INFO     | [job] queue monitor thread has finished
[2024-06-14 09:02:38] 2024-06-14 13:02:32,507 | INFO     | [data] queue_monitor thread has finished
[2024-06-14 09:02:38] 2024-06-14 13:02:33,323 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140272397875008)>', '<ExcThread(monitor, started 140271727658752)>']
[2024-06-14 09:02:38] 2024-06-14 13:02:33,340 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-14 09:02:38] 2024-06-14 13:02:33,340 | INFO     | [monitor] control thread has ended
[2024-06-14 09:02:38] 2024-06-14 13:02:38,348 | INFO     | all workflow threads have been joined
[2024-06-14 09:02:38] 2024-06-14 13:02:38,348 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-14 09:02:38] 2024-06-14 13:02:38,348 | INFO     | traces error code: 0
[2024-06-14 09:02:38] 2024-06-14 13:02:38,349 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-14 09:02:38] 2024-06-14 13:02:38,425 [wrapper] ==== pilot stdout END ====
[2024-06-14 09:02:38] 2024-06-14 13:02:38,426 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-14 09:02:38] 2024-06-14 13:02:38,428 [wrapper] pilotpid: 93785
[2024-06-14 09:02:38] 2024-06-14 13:02:38,439 [wrapper] Pilot exit status: 0
[2024-06-14 09:02:38] 2024-06-14 13:02:38,535 [wrapper] pandaids: 6229525891
[2024-06-14 09:02:38] 2024-06-14 13:02:38,648 [wrapper] cleanup supervisor_pilot 38185 93786
[2024-06-14 09:02:38] 2024-06-14 13:02:38,664 [wrapper] Test setup, not cleaning
[2024-06-14 09:02:38] 2024-06-14 13:02:38,666 [wrapper] ==== wrapper stdout END ====
[2024-06-14 09:02:38] 2024-06-14 13:02:38,669 [wrapper] ==== wrapper stderr END ====
[2024-06-14 09:02:38] 2024-06-14 13:02:38,687 [wrapper] apfmon messages muted
[2024-06-14 09:02:38]  *** Error codes and diagnostics ***
[2024-06-14 09:02:38]     "exeErrorCode": 0,
[2024-06-14 09:02:38]     "exeErrorDiag": "",
[2024-06-14 09:02:38]     "pilotErrorCode": 0,
[2024-06-14 09:02:38]     "pilotErrorDiag": "",
[2024-06-14 09:02:38]  *** Listing of results directory ***
[2024-06-14 09:02:38] total 883104
[2024-06-14 09:02:38] -rw-r--r-- 1 boincer umatlas    469766 Jun 13 13:05 pilot3.tar.gz
[2024-06-14 09:02:38] -rw-r--r-- 1 boincer umatlas      5654 Jun 13 13:32 queuedata.json
[2024-06-14 09:02:38] -rwx------ 1 boincer umatlas     32308 Jun 13 13:32 runpilot2-wrapper.sh
[2024-06-14 09:02:38] -rw-r--r-- 1 boincer umatlas       100 Jun 13 18:56 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-14 09:02:38] -rwxr-xr-x 1 boincer umatlas      7986 Jun 13 18:56 run_atlas
[2024-06-14 09:02:38] -rw-r--r-- 1 boincer umatlas       105 Jun 13 18:56 job.xml
[2024-06-14 09:02:38] -rw-r--r-- 2 boincer umatlas 543817526 Jun 13 18:56 EVNT.38776210._000758.pool.root.1
[2024-06-14 09:02:38] -rw-r--r-- 2 boincer umatlas     17537 Jun 13 18:56 start_atlas.sh
[2024-06-14 09:02:38] drwxrwx--x 2 boincer umatlas      4096 Jun 13 18:56 shared
[2024-06-14 09:02:38] -rw-r--r-- 2 boincer umatlas    482534 Jun 13 18:56 input.tar.gz
[2024-06-14 09:02:38] -rw-r--r-- 1 boincer umatlas         0 Jun 13 18:56 boinc_lockfile
[2024-06-14 09:02:38] -rw-r--r-- 1 boincer umatlas      2647 Jun 13 18:56 pandaJob.out
[2024-06-14 09:02:38] -rw------- 1 boincer umatlas       467 Jun 13 18:56 setup.sh.local
[2024-06-14 09:02:38] -rw------- 1 boincer umatlas   1025303 Jun 13 18:56 agis_schedconf.cvmfs.json
[2024-06-14 09:02:38] -rw------- 1 boincer umatlas   1316790 Jun 13 18:56 cric_ddmendpoints.json
[2024-06-14 09:02:38] drwx------ 4 boincer umatlas      4096 Jun 13 18:56 pilot3
[2024-06-14 09:02:38] -rw-r--r-- 1 boincer umatlas      6388 Jun 14 09:00 init_data.xml
[2024-06-14 09:02:38] -rw------- 1 boincer umatlas 345071914 Jun 14 09:01 HITS.38921013._030574.pool.root.1
[2024-06-14 09:02:38] -rw-r--r-- 1 boincer umatlas       532 Jun 14 09:01 boinc_task_state.xml
[2024-06-14 09:02:38] -rw------- 1 boincer umatlas        95 Jun 14 09:01 pilot_heartbeat.json
[2024-06-14 09:02:38] -rw------- 1 boincer umatlas      1073 Jun 14 09:02 memory_monitor_summary.json
[2024-06-14 09:02:38] -rw------- 1 boincer umatlas         0 Jun 14 09:02 agis_ddmendpoints.agis.ALL.json
[2024-06-14 09:02:38] -rw------- 1 boincer umatlas    800064 Jun 14 09:02 log.38921013._030574.job.log.tgz.1
[2024-06-14 09:02:38] -rw------- 1 boincer umatlas      7739 Jun 14 09:02 heartbeat.json
[2024-06-14 09:02:38] -rw-r--r-- 1 boincer umatlas      8192 Jun 14 09:02 boinc_mmap_file
[2024-06-14 09:02:38] -rw-r--r-- 1 boincer umatlas        29 Jun 14 09:02 wrapper_checkpoint.txt
[2024-06-14 09:02:38] -rw------- 1 boincer umatlas      4211 Jun 14 09:02 pilotlog.txt
[2024-06-14 09:02:38] -rw------- 1 boincer umatlas   5136213 Jun 14 09:02 log.38921013._030574.job.log.1
[2024-06-14 09:02:38] -rw------- 1 boincer umatlas       357 Jun 14 09:02 output.list
[2024-06-14 09:02:38] -rw-r--r-- 1 boincer umatlas       620 Jun 14 09:02 runtime_log
[2024-06-14 09:02:38] -rw------- 1 boincer umatlas   5959680 Jun 14 09:02 result.tar.gz
[2024-06-14 09:02:38] -rw-r--r-- 1 boincer umatlas     11400 Jun 14 09:02 runtime_log.err
[2024-06-14 09:02:38] -rw------- 1 boincer umatlas       652 Jun 14 09:02 kOdNDmnU3b5n9Rq4apOajLDm4fhM0noT9bVo2ijZDm0OTKDmcz5rym.diag
[2024-06-14 09:02:38] -rw-r--r-- 1 boincer umatlas     21729 Jun 14 09:02 stderr.txt
[2024-06-14 09:02:38] HITS file was successfully produced:
[2024-06-14 09:02:38] -rw------- 1 boincer umatlas 345071914 Jun 14 09:01 shared/HITS.pool.root.1
[2024-06-14 09:02:38]  *** Contents of shared directory: ***
[2024-06-14 09:02:38] total 874380
[2024-06-14 09:02:38] -rw-r--r-- 2 boincer umatlas 543817526 Jun 13 18:56 ATLAS.root_0
[2024-06-14 09:02:38] -rw-r--r-- 2 boincer umatlas     17537 Jun 13 18:56 start_atlas.sh
[2024-06-14 09:02:38] -rw-r--r-- 2 boincer umatlas    482534 Jun 13 18:56 input.tar.gz
[2024-06-14 09:02:38] -rw------- 1 boincer umatlas 345071914 Jun 14 09:01 HITS.pool.root.1
[2024-06-14 09:02:38] -rw------- 1 boincer umatlas   5959680 Jun 14 09:02 result.tar.gz
09:02:40 (89547): run_atlas exited; CPU time 140799.261544
09:02:40 (89547): called boinc_finish(0)

</stderr_txt>
]]>

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