Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
17:02:45 (43746): wrapper (7.7.26015): starting
17:02:45 (43746): wrapper: running run_atlas (--nthreads 12)
[2024-06-13 17:02:45] Arguments: --nthreads 12
[2024-06-13 17:02:45] Threads: 12
[2024-06-13 17:02:45] Checking for CVMFS
[2024-06-13 17:02:46] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-13 17:02:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-13 17:02:46] Running cvmfs_config stat atlas.cern.ch
[2024-06-13 17:02:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-13 17:02:46] 2.11.3.0 144541 223050 149008 133849 1 102 35600488 45568001 7296 130560 0 350890723 99.774 218185869 19083 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2024-06-13 17:02:46] CVMFS is ok
[2024-06-13 17:02:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-13 17:02:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-13 17:02:46] Further information can be found at the LHC@home message board.
[2024-06-13 17:02:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-13 17:02:46] Checking for apptainer binary...
[2024-06-13 17:02:46] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-13 17:02:46] Running /usr/bin/apptainer --version
[2024-06-13 17:02:46] apptainer version 1.1.8-1.el7
[2024-06-13 17:02:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-13 17:02:47] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0048.triumf.lcg
[2024-06-13 17:02:47] apptainer works
[2024-06-13 17:02:47] Set ATHENA_PROC_NUMBER=12
[2024-06-13 17:02:47] Set ATHENA_CORE_NUMBER=12
[2024-06-13 17:02:47] Starting ATLAS job with PandaID=6229311643
[2024-06-13 17:02:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-14 02:14:39]  *** The last 200 lines of the pilot log: ***
[2024-06-14 02:14:39] 2024-06-14 09:14:21,721 | INFO     | intersect: -5868329323.201239
[2024-06-14 02:14:39] 2024-06-14 09:14:21,721 | INFO     | chi2: 0.8484011157059671
[2024-06-14 02:14:39] 2024-06-14 09:14:21,721 | INFO     | current chi2=0.8484011157059671 (change=62.75030471690841 %)
[2024-06-14 02:14:39] 2024-06-14 09:14:21,721 | INFO     | model: linear, x: [1718324317.0, 1718324378.0, 1718324439.0, 1718324500.0, 1718324561.0, 1718324623.0, 1718324684.0, 1718324744.0, 1718324807.0, 1718324866.0, 1718
[2024-06-14 02:14:39] 2024-06-14 09:14:21,722 | INFO     | sum of square deviations: 45387813204.46667
[2024-06-14 02:14:39] 2024-06-14 09:14:21,725 | INFO     | sum of deviations: 89042884262.66037
[2024-06-14 02:14:39] 2024-06-14 09:14:21,725 | INFO     | mean x: 1718340363.1024668
[2024-06-14 02:14:39] 2024-06-14 09:14:21,725 | INFO     | mean y: 2739200.8766603414
[2024-06-14 02:14:39] 2024-06-14 09:14:21,725 | INFO     | -- intersect: -3368341520.4243884
[2024-06-14 02:14:39] 2024-06-14 09:14:21,726 | INFO     | intersect: -3368341520.4243884
[2024-06-14 02:14:39] 2024-06-14 09:14:21,726 | INFO     | chi2: 0.1925681564139598
[2024-06-14 02:14:39] 2024-06-14 09:14:21,726 | INFO     | current chi2=0.1925681564139598 (change=77.30222734870864 %)
[2024-06-14 02:14:39] 2024-06-14 09:14:21,726 | INFO     | model: linear, x: [1718324623.0, 1718324684.0, 1718324744.0, 1718324807.0, 1718324866.0, 1718324928.0, 1718324988.0, 1718325049.0, 1718325110.0, 1718325171.0, 1718
[2024-06-14 02:14:39] 2024-06-14 09:14:21,726 | INFO     | sum of square deviations: 44107746303.37938
[2024-06-14 02:14:39] 2024-06-14 09:14:21,730 | INFO     | sum of deviations: 49249239759.45967
[2024-06-14 02:14:39] 2024-06-14 09:14:21,730 | INFO     | mean x: 1718340515.6321838
[2024-06-14 02:14:39] 2024-06-14 09:14:21,730 | INFO     | mean y: 2743949.210727969
[2024-06-14 02:14:39] 2024-06-14 09:14:21,730 | INFO     | -- intersect: -1915897811.823414
[2024-06-14 02:14:39] 2024-06-14 09:14:21,730 | INFO     | intersect: -1915897811.823414
[2024-06-14 02:14:39] 2024-06-14 09:14:21,731 | INFO     | chi2: 0.02483563475058557
[2024-06-14 02:14:39] 2024-06-14 09:14:21,731 | INFO     | current chi2=0.02483563475058557 (change=87.10293788283619 %)
[2024-06-14 02:14:39] 2024-06-14 09:14:21,731 | INFO     | model: linear, x: [1718324928.0, 1718324988.0, 1718325049.0, 1718325110.0, 1718325171.0, 1718325232.0, 1718325293.0, 1718325354.0, 1718325415.0, 1718325476.0, 1718
[2024-06-14 02:14:39] 2024-06-14 09:14:21,731 | INFO     | sum of square deviations: 42852086435.62098
[2024-06-14 02:14:39] 2024-06-14 09:14:21,735 | INFO     | sum of deviations: 36664021705.80465
[2024-06-14 02:14:39] 2024-06-14 09:14:21,735 | INFO     | mean x: 1718340668.154739
[2024-06-14 02:14:39] 2024-06-14 09:14:21,735 | INFO     | mean y: 2745475.589941973
[2024-06-14 02:14:39] 2024-06-14 09:14:21,735 | INFO     | -- intersect: -1467457839.9438877
[2024-06-14 02:14:39] 2024-06-14 09:14:21,735 | INFO     | intersect: -1467457839.9438877
[2024-06-14 02:14:39] 2024-06-14 09:14:21,735 | INFO     | chi2: 0.009429311382120067
[2024-06-14 02:14:39] 2024-06-14 09:14:21,735 | INFO     | current chi2=0.009429311382120067 (change=62.033137156288134 %)
[2024-06-14 02:14:39] 2024-06-14 09:14:21,735 | INFO     | model: linear, x: [1718325232.0, 1718325293.0, 1718325354.0, 1718325415.0, 1718325476.0, 1718325537.0, 1718325598.0, 1718325660.0, 1718325720.0, 1718325781.0, 1718
[2024-06-14 02:14:39] 2024-06-14 09:14:21,736 | INFO     | sum of square deviations: 41620379026.74219
[2024-06-14 02:14:39] 2024-06-14 09:14:21,739 | INFO     | sum of deviations: 29500739764.54297
[2024-06-14 02:14:39] 2024-06-14 09:14:21,739 | INFO     | mean x: 1718340820.6835938
[2024-06-14 02:14:39] 2024-06-14 09:14:21,739 | INFO     | mean y: 2746362.052734375
[2024-06-14 02:14:39] 2024-06-14 09:14:21,739 | INFO     | -- intersect: -1215222492.704853
[2024-06-14 02:14:39] 2024-06-14 09:14:21,739 | INFO     | intersect: -1215222492.704853
[2024-06-14 02:14:39] 2024-06-14 09:14:21,740 | INFO     | chi2: 0.005152700271070865
[2024-06-14 02:14:39] 2024-06-14 09:14:21,740 | INFO     | current chi2=0.005152700271070865 (change=45.354437219652596 %)
[2024-06-14 02:14:39] 2024-06-14 09:14:21,740 | INFO     | model: linear, x: [1718325537.0, 1718325598.0, 1718325660.0, 1718325720.0, 1718325781.0, 1718325847.0, 1718325903.0, 1718325975.0, 1718326026.0, 1718326087.0, 1718
[2024-06-14 02:14:39] 2024-06-14 09:14:21,740 | INFO     | sum of square deviations: 40412454535.56587
[2024-06-14 02:14:39] 2024-06-14 09:14:21,744 | INFO     | sum of deviations: 26513387826.483234
[2024-06-14 02:14:39] 2024-06-14 09:14:21,744 | INFO     | mean x: 1718340973.2149901
[2024-06-14 02:14:39] 2024-06-14 09:14:21,744 | INFO     | mean y: 2746738.646942801
[2024-06-14 02:14:39] 2024-06-14 09:14:21,744 | INFO     | -- intersect: -1124604746.5465744
[2024-06-14 02:14:39] 2024-06-14 09:14:21,744 | INFO     | intersect: -1124604746.5465744
[2024-06-14 02:14:39] 2024-06-14 09:14:21,744 | INFO     | chi2: 0.004512479701874655
[2024-06-14 02:14:39] 2024-06-14 09:14:21,744 | INFO     | current chi2=0.004512479701874655 (change=12.424952656195451 %)
[2024-06-14 02:14:39] 2024-06-14 09:14:21,744 | INFO     | left removable region: 70
[2024-06-14 02:14:39] 2024-06-14 09:14:21,745 | INFO     | model: linear, x: [1718327672.0, 1718327733.0, 1718327794.0, 1718327856.0, 1718327916.0, 1718327977.0, 1718328055.0, 1718328103.0, 1718328162.0, 1718328229.0, 1718
[2024-06-14 02:14:39] 2024-06-14 09:14:21,745 | INFO     | sum of square deviations: 31380628297.124336
[2024-06-14 02:14:39] 2024-06-14 09:14:21,748 | INFO     | sum of deviations: 27901155704.098682
[2024-06-14 02:14:39] 2024-06-14 09:14:21,748 | INFO     | mean x: 1718341857.751073
[2024-06-14 02:14:39] 2024-06-14 09:14:21,748 | INFO     | mean y: 2746184.802575107
[2024-06-14 02:14:39] 2024-06-14 09:14:21,748 | INFO     | -- intersect: -1525066555.9759881
[2024-06-14 02:14:39] 2024-06-14 09:14:21,748 | INFO     | intersect: -1525066555.9759881
[2024-06-14 02:14:39] 2024-06-14 09:14:21,748 | INFO     | chi2: 0.0012878759427424795
[2024-06-14 02:14:39] 2024-06-14 09:14:21,748 | INFO     | -- intersect: -1525066555.9759881
[2024-06-14 02:14:39] 2024-06-14 09:14:21,748 | INFO     | current memory leak: 0.89 B/s (using 466 data points, chi2=0.00)
[2024-06-14 02:14:39] 2024-06-14 09:14:21,749 | INFO     | ..............................
[2024-06-14 02:14:39] 2024-06-14 09:14:21,749 | INFO     | . Timing measurements:
[2024-06-14 02:14:39] 2024-06-14 09:14:21,749 | INFO     | . get job = 0 s
[2024-06-14 02:14:39] 2024-06-14 09:14:21,749 | INFO     | . initial setup = 3 s
[2024-06-14 02:14:39] 2024-06-14 09:14:21,749 | INFO     | . payload setup = 4 s
[2024-06-14 02:14:39] 2024-06-14 09:14:21,749 | INFO     | . stage-in = 0 s
[2024-06-14 02:14:39] 2024-06-14 09:14:21,749 | INFO     | . payload execution = 33054 s
[2024-06-14 02:14:39] 2024-06-14 09:14:21,749 | INFO     | . stage-out = 2 s
[2024-06-14 02:14:39] 2024-06-14 09:14:21,749 | INFO     | . log creation = 0 s
[2024-06-14 02:14:39] 2024-06-14 09:14:21,749 | INFO     | ..............................
[2024-06-14 02:14:39] 2024-06-14 09:14:21,798 | INFO     | 
[2024-06-14 02:14:39] 2024-06-14 09:14:21,798 | INFO     | job summary report
[2024-06-14 02:14:39] 2024-06-14 09:14:21,798 | INFO     | --------------------------------------------------
[2024-06-14 02:14:39] 2024-06-14 09:14:21,798 | INFO     | PanDA job id: 6229311643
[2024-06-14 02:14:39] 2024-06-14 09:14:21,798 | INFO     | task id: 38921013
[2024-06-14 02:14:39] 2024-06-14 09:14:21,798 | INFO     | errors: (none)
[2024-06-14 02:14:39] 2024-06-14 09:14:21,798 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-14 02:14:39] 2024-06-14 09:14:21,798 | INFO     | pilot state: finished 
[2024-06-14 02:14:39] 2024-06-14 09:14:21,799 | INFO     | transexitcode: 0
[2024-06-14 02:14:39] 2024-06-14 09:14:21,799 | INFO     | exeerrorcode: 0
[2024-06-14 02:14:39] 2024-06-14 09:14:21,799 | INFO     | exeerrordiag: 
[2024-06-14 02:14:39] 2024-06-14 09:14:21,799 | INFO     | exitcode: 0
[2024-06-14 02:14:39] 2024-06-14 09:14:21,799 | INFO     | exitmsg: OK
[2024-06-14 02:14:39] 2024-06-14 09:14:21,799 | INFO     | cpuconsumptiontime: 106544 s
[2024-06-14 02:14:39] 2024-06-14 09:14:21,799 | INFO     | nevents: 400
[2024-06-14 02:14:39] 2024-06-14 09:14:21,799 | INFO     | neventsw: 0
[2024-06-14 02:14:39] 2024-06-14 09:14:21,799 | INFO     | pid: 54287
[2024-06-14 02:14:39] 2024-06-14 09:14:21,799 | INFO     | pgrp: 54287
[2024-06-14 02:14:39] 2024-06-14 09:14:21,799 | INFO     | corecount: 12
[2024-06-14 02:14:39] 2024-06-14 09:14:21,799 | INFO     | event service: False
[2024-06-14 02:14:39] 2024-06-14 09:14:21,799 | INFO     | sizes: {0: 2379063, 3: 2379269, 11: 2379297, 33062: 2417200, 33063: 2417199, 33065: 2426393, 33070: 2426507}
[2024-06-14 02:14:39] 2024-06-14 09:14:21,799 | INFO     | --------------------------------------------------
[2024-06-14 02:14:39] 2024-06-14 09:14:21,799 | INFO     | 
[2024-06-14 02:14:39] 2024-06-14 09:14:21,800 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-06-14 02:14:39] 2024-06-14 09:14:21,831 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-14 02:14:39] 2024-06-14 09:14:21,832 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-14 02:14:39] 2024-06-14 09:14:21,832 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-14 02:14:39] 2024-06-14 09:14:21,832 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-14 02:14:39] 2024-06-14 09:14:21,832 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-14 02:14:39] 2024-06-14 09:14:21,832 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-14 02:14:39] 2024-06-14 09:14:21,832 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-14 02:14:39] 2024-06-14 09:14:21,832 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-14 02:14:39] 2024-06-14 09:14:21,832 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-14 02:14:39] 2024-06-14 09:14:21,832 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-14 02:14:39] 2024-06-14 09:14:21,832 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-14 02:14:39] 2024-06-14 09:14:21,832 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-14 02:14:39] 2024-06-14 09:14:21,833 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-14 02:14:39] 2024-06-14 09:14:21,833 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-14 02:14:39] 2024-06-14 09:14:21,833 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-14 02:14:39] 2024-06-14 09:14:21,833 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-14 02:14:39] 2024-06-14 09:14:21,833 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-14 02:14:39] 2024-06-14 09:14:21,833 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-14 02:14:39] 2024-06-14 09:14:21,833 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-14 02:14:39] 2024-06-14 09:14:21,833 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-14 02:14:39] 2024-06-14 09:14:21,833 | INFO     | job 6229311643 has completed (purged errors)
[2024-06-14 02:14:39] 2024-06-14 09:14:21,833 | INFO     | overall cleanup function is called
[2024-06-14 02:14:39] 2024-06-14 09:14:22,841 | INFO     | --- collectZombieJob: --- 10, [54287]
[2024-06-14 02:14:39] 2024-06-14 09:14:22,841 | INFO     | zombie collector waiting for pid 54287
[2024-06-14 02:14:39] 2024-06-14 09:14:22,842 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-14 02:14:39] 2024-06-14 09:14:23,847 | INFO     | collected zombie processes
[2024-06-14 02:14:39] 2024-06-14 09:14:23,847 | INFO     | will now attempt to kill all subprocesses of pid=54287
[2024-06-14 02:14:39] 2024-06-14 09:14:24,236 | INFO     | process IDs to be killed: [54287] (in reverse order)
[2024-06-14 02:14:39] 2024-06-14 09:14:24,317 | WARNING  | found no corresponding commands to process id(s)
[2024-06-14 02:14:39] 2024-06-14 09:14:24,317 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-14 02:14:39] 2024-06-14 09:14:24,325 | INFO     | did not find any defunct processes belonging to 54287
[2024-06-14 02:14:39] 2024-06-14 09:14:24,331 | INFO     | did not find any defunct processes belonging to 54287
[2024-06-14 02:14:39] 2024-06-14 09:14:24,331 | INFO     | ready for new job
[2024-06-14 02:14:39] 2024-06-14 09:14:24,331 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-14 02:14:39] 2024-06-14 09:14:24,335 | INFO     | *************************************
[2024-06-14 02:14:39] 2024-06-14 09:14:24,335 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-14 02:14:39] 2024-06-14 09:14:24,335 | INFO     | *************************************
[2024-06-14 02:14:39] 2024-06-14 09:14:24,335 | INFO     | 
[2024-06-14 02:14:39] 2024-06-14 09:14:24,339 | INFO     | architecture information:
[2024-06-14 02:14:39] 2024-06-14 09:14:24,340 | INFO     | executing command: cat /etc/os-release
[2024-06-14 02:14:39] 2024-06-14 09:14:24,362 | INFO     | cat /etc/os-release:
[2024-06-14 02:14:39] NAME="CentOS Linux"
[2024-06-14 02:14:39] VERSION="7 (Core)"
[2024-06-14 02:14:39] ID="centos"
[2024-06-14 02:14:39] ID_LIKE="rhel fedora"
[2024-06-14 02:14:39] VERSION_ID="7"
[2024-06-14 02:14:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-14 02:14:39] ANSI_COLOR="0;31"
[2024-06-14 02:14:39] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-14 02:14:39] HOME_URL="https://www.centos.org/"
[2024-06-14 02:14:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-14 02:14:39] 
[2024-06-14 02:14:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-14 02:14:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-14 02:14:39] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-14 02:14:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-14 02:14:39] 
[2024-06-14 02:14:39] 2024-06-14 09:14:24,362 | INFO     | *************************************
[2024-06-14 02:14:39] 2024-06-14 09:14:24,865 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-06-14 02:14:39] 2024-06-14 09:14:24,897 | INFO     | sufficient remaining disk space (2195521011712 B)
[2024-06-14 02:14:39] 2024-06-14 09:14:24,898 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-14 02:14:39] 2024-06-14 09:14:24,898 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-14 02:14:39] 2024-06-14 09:14:24,898 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-14 02:14:39] 2024-06-14 09:14:24,899 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-14 02:14:39] 2024-06-14 09:14:24,899 | INFO     | found 0 job(s) in 20 queues
[2024-06-14 02:14:39] 2024-06-14 09:14:24,899 | INFO     | aborting loop
[2024-06-14 02:14:39] 2024-06-14 09:14:24,900 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-14 02:14:39] 2024-06-14 09:14:24,900 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-14 02:14:39] 2024-06-14 09:14:24,961 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-14 02:14:39] 2024-06-14 09:14:25,013 | INFO     | all data control threads have been joined
[2024-06-14 02:14:39] 2024-06-14 09:14:25,474 | INFO     | all job control threads have been joined
[2024-06-14 02:14:39] 2024-06-14 09:14:25,904 | INFO     | [job] retrieve thread has finished
[2024-06-14 02:14:39] 2024-06-14 09:14:25,905 | INFO     | [job] job monitor thread has finished
[2024-06-14 02:14:39] 2024-06-14 09:14:26,019 | INFO     | [data] control thread has finished
[2024-06-14 02:14:39] 2024-06-14 09:14:26,147 | INFO     | [data] copytool_in thread has finished
[2024-06-14 02:14:39] 2024-06-14 09:14:26,173 | INFO     | [payload] execute_payloads thread has finished
[2024-06-14 02:14:39] 2024-06-14 09:14:26,207 | INFO     | all payload control threads have been joined
[2024-06-14 02:14:39] 2024-06-14 09:14:26,249 | INFO     | [payload] validate_pre thread has finished
[2024-06-14 02:14:39] 2024-06-14 09:14:26,479 | INFO     | [job] control thread has finished
[2024-06-14 02:14:39] 2024-06-14 09:14:26,673 | INFO     | [job] validate thread has finished
[2024-06-14 02:14:39] 2024-06-14 09:14:26,717 | INFO     | [job] create_data_payload thread has finished
[2024-06-14 02:14:39] 2024-06-14 09:14:26,805 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-14 02:14:39] 2024-06-14 09:14:26,854 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-14 02:14:39] 2024-06-14 09:14:26,966 | INFO     | [data] copytool_out thread has finished
[2024-06-14 02:14:39] 2024-06-14 09:14:27,057 | INFO     | [payload] validate_post thread has finished
[2024-06-14 02:14:39] 2024-06-14 09:14:27,211 | INFO     | [payload] control thread has finished
[2024-06-14 02:14:39] 2024-06-14 09:14:27,453 | INFO     | [payload] failed_post thread has finished
[2024-06-14 02:14:39] 2024-06-14 09:14:27,548 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-14 02:14:39] 2024-06-14 09:14:27,810 | INFO     | [job] queue monitor thread has finished
[2024-06-14 02:14:39] 2024-06-14 09:14:31,551 | INFO     | [data] queue_monitor thread has finished
[2024-06-14 02:14:39] 2024-06-14 09:14:33,217 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140366452713280)>', '<ExcThread(monitor, started 140366032398080)>']
[2024-06-14 02:14:39] 2024-06-14 09:14:33,941 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-14 02:14:39] 2024-06-14 09:14:33,942 | INFO     | [monitor] control thread has ended
[2024-06-14 02:14:39] 2024-06-14 09:14:38,230 | INFO     | all workflow threads have been joined
[2024-06-14 02:14:39] 2024-06-14 09:14:38,230 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-14 02:14:39] 2024-06-14 09:14:38,231 | INFO     | traces error code: 0
[2024-06-14 02:14:39] 2024-06-14 09:14:38,231 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-14 02:14:39] 2024-06-14 09:14:38,341 [wrapper] ==== pilot stdout END ====
[2024-06-14 02:14:39] 2024-06-14 09:14:38,345 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-14 02:14:39] 2024-06-14 09:14:38,349 [wrapper] pilotpid: 47891
[2024-06-14 02:14:39] 2024-06-14 09:14:38,353 [wrapper] Pilot exit status: 0
[2024-06-14 02:14:39] 2024-06-14 09:14:38,368 [wrapper] pandaids: 6229311643
[2024-06-14 02:14:39] 2024-06-14 09:14:38,431 [wrapper] cleanup supervisor_pilot 171613 47892
[2024-06-14 02:14:39] 2024-06-14 09:14:38,434 [wrapper] Test setup, not cleaning
[2024-06-14 02:14:39] 2024-06-14 09:14:38,437 [wrapper] ==== wrapper stdout END ====
[2024-06-14 02:14:39] 2024-06-14 09:14:38,439 [wrapper] ==== wrapper stderr END ====
[2024-06-14 02:14:39] 2024-06-14 09:14:38,444 [wrapper] apfmon messages muted
[2024-06-14 02:14:39]  *** Error codes and diagnostics ***
[2024-06-14 02:14:39]     "exeErrorCode": 0,
[2024-06-14 02:14:39]     "exeErrorDiag": "",
[2024-06-14 02:14:39]     "pilotErrorCode": 0,
[2024-06-14 02:14:39]     "pilotErrorDiag": "",
[2024-06-14 02:14:39]  *** Listing of results directory ***
[2024-06-14 02:14:39] total 878072
[2024-06-14 02:14:39] -rwx------ 1 boinc boinc     32308 Jun 13 04:56 runpilot2-wrapper.sh
[2024-06-14 02:14:39] -rw-r--r-- 1 boinc boinc      5654 Jun 13 04:56 queuedata.json
[2024-06-14 02:14:39] -rw-r--r-- 1 boinc boinc    469766 Jun 13 04:56 pilot3.tar.gz
[2024-06-14 02:14:39] -rw-r--r-- 1 boinc boinc       100 Jun 13 17:02 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-14 02:14:39] -rwxr-xr-x 1 boinc boinc      7986 Jun 13 17:02 run_atlas
[2024-06-14 02:14:39] -rw-r--r-- 1 boinc boinc       105 Jun 13 17:02 job.xml
[2024-06-14 02:14:39] -rw-r--r-- 1 boinc boinc      6629 Jun 13 17:02 init_data.xml
[2024-06-14 02:14:39] -rw-r--r-- 2 boinc boinc 542749031 Jun 13 17:02 EVNT.38776210._000088.pool.root.1
[2024-06-14 02:14:39] -rw-r--r-- 2 boinc boinc     17537 Jun 13 17:02 start_atlas.sh
[2024-06-14 02:14:39] drwxrwx--x 2 boinc boinc      4096 Jun 13 17:02 shared
[2024-06-14 02:14:39] -rw-r--r-- 2 boinc boinc    482515 Jun 13 17:02 input.tar.gz
[2024-06-14 02:14:39] -rw-r--r-- 1 boinc boinc         0 Jun 13 17:02 boinc_lockfile
[2024-06-14 02:14:39] -rw-r--r-- 1 boinc boinc      2647 Jun 13 17:02 pandaJob.out
[2024-06-14 02:14:39] -rw------- 1 boinc boinc       424 Jun 13 17:02 setup.sh.local
[2024-06-14 02:14:39] -rw------- 1 boinc boinc   1025303 Jun 13 17:02 agis_schedconf.cvmfs.json
[2024-06-14 02:14:39] -rw------- 1 boinc boinc   1316790 Jun 13 17:02 cric_ddmendpoints.json
[2024-06-14 02:14:39] drwx------ 4 boinc boinc      4096 Jun 13 17:02 pilot3
[2024-06-14 02:14:39] -rw------- 1 boinc boinc 344686434 Jun 14 02:13 HITS.38921013._028890.pool.root.1
[2024-06-14 02:14:39] -rw-r--r-- 1 boinc boinc       533 Jun 14 02:13 boinc_task_state.xml
[2024-06-14 02:14:39] -rw------- 1 boinc boinc        95 Jun 14 02:14 pilot_heartbeat.json
[2024-06-14 02:14:39] -rw------- 1 boinc boinc      1064 Jun 14 02:14 memory_monitor_summary.json
[2024-06-14 02:14:39] -rw------- 1 boinc boinc         0 Jun 14 02:14 agis_ddmendpoints.agis.ALL.json
[2024-06-14 02:14:39] -rw------- 1 boinc boinc    644347 Jun 14 02:14 log.38921013._028890.job.log.tgz.1
[2024-06-14 02:14:39] -rw------- 1 boinc boinc      7788 Jun 14 02:14 heartbeat.json
[2024-06-14 02:14:39] -rw-r--r-- 1 boinc boinc        29 Jun 14 02:14 wrapper_checkpoint.txt
[2024-06-14 02:14:39] -rw-r--r-- 1 boinc boinc      8192 Jun 14 02:14 boinc_mmap_file
[2024-06-14 02:14:39] -rw------- 1 boinc boinc      4333 Jun 14 02:14 pilotlog.txt
[2024-06-14 02:14:39] -rw------- 1 boinc boinc   3442054 Jun 14 02:14 log.38921013._028890.job.log.1
[2024-06-14 02:14:39] -rw------- 1 boinc boinc       357 Jun 14 02:14 output.list
[2024-06-14 02:14:39] -rw-r--r-- 1 boinc boinc       620 Jun 14 02:14 runtime_log
[2024-06-14 02:14:39] -rw------- 1 boinc boinc   4106240 Jun 14 02:14 result.tar.gz
[2024-06-14 02:14:39] -rw-r--r-- 1 boinc boinc     11287 Jun 14 02:14 runtime_log.err
[2024-06-14 02:14:39] -rw------- 1 boinc boinc       660 Jun 14 02:14 NFOKDmXFyb5n9Rq4apOajLDm4fhM0noT9bVo2ijZDm49SKDmVE9r0m.diag
[2024-06-14 02:14:39] -rw-r--r-- 1 boinc boinc     21978 Jun 14 02:14 stderr.txt
[2024-06-14 02:14:39] HITS file was successfully produced:
[2024-06-14 02:14:39] -rw------- 1 boinc boinc 344686434 Jun 14 02:13 shared/HITS.pool.root.1
[2024-06-14 02:14:39]  *** Contents of shared directory: ***
[2024-06-14 02:14:39] total 871152
[2024-06-14 02:14:39] -rw-r--r-- 2 boinc boinc 542749031 Jun 13 17:02 ATLAS.root_0
[2024-06-14 02:14:39] -rw-r--r-- 2 boinc boinc     17537 Jun 13 17:02 start_atlas.sh
[2024-06-14 02:14:39] -rw-r--r-- 2 boinc boinc    482515 Jun 13 17:02 input.tar.gz
[2024-06-14 02:14:39] -rw------- 1 boinc boinc 344686434 Jun 14 02:13 HITS.pool.root.1
[2024-06-14 02:14:39] -rw------- 1 boinc boinc   4106240 Jun 14 02:14 result.tar.gz
02:14:40 (43746): run_atlas exited; CPU time 106093.488953
02:14:40 (43746): called boinc_finish(0)

</stderr_txt>
]]>

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