Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:51:47 (80992): wrapper (7.7.26015): starting
10:51:47 (80992): wrapper: running run_atlas (--nthreads 8)
[2024-06-13 10:51:47] Arguments: --nthreads 8
[2024-06-13 10:51:47] Threads: 8
[2024-06-13 10:51:47] Checking for CVMFS
[2024-06-13 10:51:47] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-13 10:51:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-13 10:51:47] Running cvmfs_config stat atlas.cern.ch
[2024-06-13 10:51:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-13 10:51:47] 2.11.2.0 92756 3141 167856 133834 0 423 13148553 18432000 9851 130560 0 11821354 98.548 30802417 53427 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-06-13 10:51:47] CVMFS is ok
[2024-06-13 10:51:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-13 10:51:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-13 10:51:47] Further information can be found at the LHC@home message board.
[2024-06-13 10:51:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-13 10:51:47] Checking for apptainer binary...
[2024-06-13 10:51:47] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-13 10:51:47] Running /usr/bin/apptainer --version
[2024-06-13 10:51:47] apptainer version 1.3.1-1.el7
[2024-06-13 10:51:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-13 10:51:48] c-212-11.aglt2.org
[2024-06-13 10:51:48] apptainer works
[2024-06-13 10:51:48] Set ATHENA_PROC_NUMBER=8
[2024-06-13 10:51:48] Set ATHENA_CORE_NUMBER=8
[2024-06-13 10:51:48] Starting ATLAS job with PandaID=6229311353
[2024-06-13 10:51:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-13 17:18:05]  *** The last 200 lines of the pilot log: ***
[2024-06-13 17:18:05] 2024-06-13 21:17:39,921 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-06-13 17:18:05] 2024-06-13 21:17:39,921 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-06-13 17:18:05] 2024-06-13 21:17:40,012 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-06-13 17:18:05] 2024-06-13 21:17:41,202 | INFO     | monitor loop #1760: job 0:6229311353 is in state 'finished'
[2024-06-13 17:18:05] 2024-06-13 21:17:41,202 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-13 17:18:05] 2024-06-13 21:17:43,706 | INFO     | monitor loop #1761: job 0:6229311353 is in state 'finished'
[2024-06-13 17:18:05] 2024-06-13 21:17:43,706 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-13 17:18:05] 2024-06-13 21:17:46,212 | INFO     | monitor loop #1762: job 0:6229311353 is in state 'finished'
[2024-06-13 17:18:05] 2024-06-13 21:17:46,212 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-13 17:18:05] 2024-06-13 21:17:48,716 | INFO     | monitor loop #1763: job 0:6229311353 is in state 'finished'
[2024-06-13 17:18:05] 2024-06-13 21:17:48,716 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-13 17:18:05] 2024-06-13 21:17:51,221 | INFO     | monitor loop #1764: job 0:6229311353 is in state 'finished'
[2024-06-13 17:18:05] 2024-06-13 21:17:51,221 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-13 17:18:05] 2024-06-13 21:17:51,350 | INFO     | CPU arch script returned: x86-64-v3
[2024-06-13 17:18:05] 2024-06-13 21:17:51,351 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6229311353/memory_monitor_summary.json (trf name=prmon)
[2024-06-13 17:18:05] 2024-06-13 21:17:51,351 | INFO     | extracted standard info from prmon json
[2024-06-13 17:18:05] 2024-06-13 21:17:51,351 | INFO     | extracted standard memory fields from prmon json
[2024-06-13 17:18:05] 2024-06-13 21:17:51,351 | WARNING  | GPU info not found in prmon json
[2024-06-13 17:18:05] 2024-06-13 21:17:51,352 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-13 17:18:05] 2024-06-13 21:17:51,352 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-13 17:18:05] 2024-06-13 21:17:51,355 | INFO     | fitting pss+swap vs Time
[2024-06-13 17:18:05] 2024-06-13 21:17:51,356 | INFO     | model: linear, x: [1718290335.0, 1718290396.0, 1718290457.0, 1718290518.0, 1718290579.0, 1718290640.0, 1718290701.0, 1718290762.0, 1718290823.0, 1718290884.0, 1718
[2024-06-13 17:18:05] 2024-06-13 21:17:51,356 | INFO     | sum of square deviations: 16880828781.957771
[2024-06-13 17:18:05] 2024-06-13 21:17:51,357 | INFO     | sum of deviations: 706858756951.9418
[2024-06-13 17:18:05] 2024-06-13 21:17:51,357 | INFO     | mean x: 1718301864.010554
[2024-06-13 17:18:05] 2024-06-13 21:17:51,358 | INFO     | mean y: 2372693.5145118735
[2024-06-13 17:18:05] 2024-06-13 21:17:51,358 | INFO     | -- intersect: -71948876581.69084
[2024-06-13 17:18:05] 2024-06-13 21:17:51,358 | INFO     | intersect: -71948876581.69084
[2024-06-13 17:18:05] 2024-06-13 21:17:51,358 | INFO     | chi2: 15.795709188176906
[2024-06-13 17:18:05] 2024-06-13 21:17:51,358 | INFO     | model: linear, x: [1718290335.0, 1718290396.0, 1718290457.0, 1718290518.0, 1718290579.0, 1718290640.0, 1718290701.0, 1718290762.0, 1718290823.0, 1718290884.0, 1718
[2024-06-13 17:18:05] 2024-06-13 21:17:51,358 | INFO     | sum of square deviations: 16221496709.457233
[2024-06-13 17:18:05] 2024-06-13 21:17:51,360 | INFO     | sum of deviations: 696013284735.1493
[2024-06-13 17:18:05] 2024-06-13 21:17:51,360 | INFO     | mean x: 1718301711.5106952
[2024-06-13 17:18:05] 2024-06-13 21:17:51,360 | INFO     | mean y: 2370184.962566845
[2024-06-13 17:18:05] 2024-06-13 21:17:51,360 | INFO     | -- intersect: -73724539225.1497
[2024-06-13 17:18:05] 2024-06-13 21:17:51,360 | INFO     | intersect: -73724539225.1497
[2024-06-13 17:18:05] 2024-06-13 21:17:51,360 | INFO     | chi2: 15.765684757519374
[2024-06-13 17:18:05] 2024-06-13 21:17:51,360 | INFO     | current chi2=15.765684757519374 (change=0.1900796621401792 %)
[2024-06-13 17:18:05] 2024-06-13 21:17:51,360 | INFO     | right removable region: 373
[2024-06-13 17:18:05] 2024-06-13 21:17:51,360 | INFO     | model: linear, x: [1718290640.0, 1718290701.0, 1718290762.0, 1718290823.0, 1718290884.0, 1718290945.0, 1718291006.0, 1718291067.0, 1718291128.0, 1718291189.0, 1718
[2024-06-13 17:18:05] 2024-06-13 21:17:51,360 | INFO     | sum of square deviations: 16221494269.457233
[2024-06-13 17:18:05] 2024-06-13 21:17:51,362 | INFO     | sum of deviations: 596335893600.5806
[2024-06-13 17:18:05] 2024-06-13 21:17:51,362 | INFO     | mean x: 1718302016.5106952
[2024-06-13 17:18:05] 2024-06-13 21:17:51,362 | INFO     | mean y: 2398227.729946524
[2024-06-13 17:18:05] 2024-06-13 21:17:51,362 | INFO     | -- intersect: -63165960461.69865
[2024-06-13 17:18:05] 2024-06-13 21:17:51,362 | INFO     | intersect: -63165960461.69865
[2024-06-13 17:18:05] 2024-06-13 21:17:51,362 | INFO     | chi2: 12.161909188576248
[2024-06-13 17:18:05] 2024-06-13 21:17:51,362 | INFO     | current chi2=12.161909188576248 (change=23.004981646031812 %)
[2024-06-13 17:18:05] 2024-06-13 21:17:51,363 | INFO     | left removable region: 10
[2024-06-13 17:18:05] 2024-06-13 21:17:51,363 | INFO     | model: linear, x: [1718290945.0, 1718291006.0, 1718291067.0, 1718291128.0, 1718291189.0, 1718291250.0, 1718291311.0, 1718291372.0, 1718291433.0, 1718291494.0, 1718
[2024-06-13 17:18:05] 2024-06-13 21:17:51,363 | INFO     | sum of square deviations: 14831866597.95587
[2024-06-13 17:18:05] 2024-06-13 21:17:51,364 | INFO     | sum of deviations: 497331679614.1213
[2024-06-13 17:18:05] 2024-06-13 21:17:51,364 | INFO     | mean x: 1718301986.0110192
[2024-06-13 17:18:05] 2024-06-13 21:17:51,364 | INFO     | mean y: 2417166.9696969697
[2024-06-13 17:18:05] 2024-06-13 21:17:51,364 | INFO     | -- intersect: -57614471924.04444
[2024-06-13 17:18:05] 2024-06-13 21:17:51,365 | INFO     | intersect: -57614471924.04444
[2024-06-13 17:18:05] 2024-06-13 21:17:51,365 | INFO     | chi2: 10.0107810714058
[2024-06-13 17:18:05] 2024-06-13 21:17:51,365 | INFO     | -- intersect: -57614471924.04444
[2024-06-13 17:18:05] 2024-06-13 21:17:51,365 | INFO     | current memory leak: 33.53 B/s (using 363 data points, chi2=10.01)
[2024-06-13 17:18:05] 2024-06-13 21:17:51,365 | INFO     | ..............................
[2024-06-13 17:18:05] 2024-06-13 21:17:51,365 | INFO     | . Timing measurements:
[2024-06-13 17:18:05] 2024-06-13 21:17:51,365 | INFO     | . get job = 0 s
[2024-06-13 17:18:05] 2024-06-13 21:17:51,365 | INFO     | . initial setup = 1 s
[2024-06-13 17:18:05] 2024-06-13 21:17:51,365 | INFO     | . payload setup = 3 s
[2024-06-13 17:18:05] 2024-06-13 21:17:51,365 | INFO     | . stage-in = 0 s
[2024-06-13 17:18:05] 2024-06-13 21:17:51,365 | INFO     | . payload execution = 23119 s
[2024-06-13 17:18:05] 2024-06-13 21:17:51,365 | INFO     | . stage-out = 2 s
[2024-06-13 17:18:05] 2024-06-13 21:17:51,365 | INFO     | . log creation = 0 s
[2024-06-13 17:18:05] 2024-06-13 21:17:51,365 | INFO     | ..............................
[2024-06-13 17:18:05] 2024-06-13 21:17:51,424 | INFO     | 
[2024-06-13 17:18:05] 2024-06-13 21:17:51,424 | INFO     | job summary report
[2024-06-13 17:18:05] 2024-06-13 21:17:51,424 | INFO     | --------------------------------------------------
[2024-06-13 17:18:05] 2024-06-13 21:17:51,424 | INFO     | PanDA job id: 6229311353
[2024-06-13 17:18:05] 2024-06-13 21:17:51,424 | INFO     | task id: 38921013
[2024-06-13 17:18:05] 2024-06-13 21:17:51,424 | INFO     | errors: (none)
[2024-06-13 17:18:05] 2024-06-13 21:17:51,424 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-13 17:18:05] 2024-06-13 21:17:51,425 | INFO     | pilot state: finished 
[2024-06-13 17:18:05] 2024-06-13 21:17:51,425 | INFO     | transexitcode: 0
[2024-06-13 17:18:05] 2024-06-13 21:17:51,425 | INFO     | exeerrorcode: 0
[2024-06-13 17:18:05] 2024-06-13 21:17:51,425 | INFO     | exeerrordiag: 
[2024-06-13 17:18:05] 2024-06-13 21:17:51,425 | INFO     | exitcode: 0
[2024-06-13 17:18:05] 2024-06-13 21:17:51,425 | INFO     | exitmsg: OK
[2024-06-13 17:18:05] 2024-06-13 21:17:51,425 | INFO     | cpuconsumptiontime: 129806 s
[2024-06-13 17:18:05] 2024-06-13 21:17:51,425 | INFO     | nevents: 400
[2024-06-13 17:18:05] 2024-06-13 21:17:51,425 | INFO     | neventsw: 0
[2024-06-13 17:18:05] 2024-06-13 21:17:51,425 | INFO     | pid: 92244
[2024-06-13 17:18:05] 2024-06-13 21:17:51,425 | INFO     | pgrp: 92244
[2024-06-13 17:18:05] 2024-06-13 21:17:51,425 | INFO     | corecount: 8
[2024-06-13 17:18:05] 2024-06-13 21:17:51,425 | INFO     | event service: False
[2024-06-13 17:18:05] 2024-06-13 21:17:51,425 | INFO     | sizes: {0: 2379063, 3: 2379269, 11: 2379297, 23126: 2413949, 23130: 2422909, 23131: 2422965, 23143: 2423263}
[2024-06-13 17:18:05] 2024-06-13 21:17:51,425 | INFO     | --------------------------------------------------
[2024-06-13 17:18:05] 2024-06-13 21:17:51,426 | INFO     | 
[2024-06-13 17:18:05] 2024-06-13 21:17:51,426 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2024-06-13 17:18:05] 2024-06-13 21:17:51,444 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-13 17:18:05] 2024-06-13 21:17:51,444 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-13 17:18:05] 2024-06-13 21:17:51,444 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-13 17:18:05] 2024-06-13 21:17:51,444 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-13 17:18:05] 2024-06-13 21:17:51,444 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-13 17:18:05] 2024-06-13 21:17:51,445 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-13 17:18:05] 2024-06-13 21:17:51,445 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-13 17:18:05] 2024-06-13 21:17:51,445 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-13 17:18:05] 2024-06-13 21:17:51,445 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-13 17:18:05] 2024-06-13 21:17:51,445 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-13 17:18:05] 2024-06-13 21:17:51,445 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-13 17:18:05] 2024-06-13 21:17:51,445 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-13 17:18:05] 2024-06-13 21:17:51,445 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-13 17:18:05] 2024-06-13 21:17:51,445 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-13 17:18:05] 2024-06-13 21:17:51,445 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-13 17:18:05] 2024-06-13 21:17:51,445 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-13 17:18:05] 2024-06-13 21:17:51,445 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-13 17:18:05] 2024-06-13 21:17:51,445 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-13 17:18:05] 2024-06-13 21:17:51,445 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-13 17:18:05] 2024-06-13 21:17:51,446 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-13 17:18:05] 2024-06-13 21:17:51,446 | INFO     | job 6229311353 has completed (purged errors)
[2024-06-13 17:18:05] 2024-06-13 21:17:51,446 | INFO     | overall cleanup function is called
[2024-06-13 17:18:05] 2024-06-13 21:17:52,454 | INFO     | --- collectZombieJob: --- 10, [92244]
[2024-06-13 17:18:05] 2024-06-13 21:17:52,454 | INFO     | zombie collector waiting for pid 92244
[2024-06-13 17:18:05] 2024-06-13 21:17:52,454 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-13 17:18:05] 2024-06-13 21:17:53,460 | INFO     | collected zombie processes
[2024-06-13 17:18:05] 2024-06-13 21:17:53,460 | INFO     | will now attempt to kill all subprocesses of pid=92244
[2024-06-13 17:18:05] 2024-06-13 21:17:53,593 | INFO     | process IDs to be killed: [92244] (in reverse order)
[2024-06-13 17:18:05] 2024-06-13 21:17:53,818 | WARNING  | found no corresponding commands to process id(s)
[2024-06-13 17:18:05] 2024-06-13 21:17:53,819 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-13 17:18:05] 2024-06-13 21:17:53,828 | INFO     | did not find any defunct processes belonging to 92244
[2024-06-13 17:18:05] 2024-06-13 21:17:53,834 | INFO     | did not find any defunct processes belonging to 92244
[2024-06-13 17:18:05] 2024-06-13 21:17:53,834 | INFO     | ready for new job
[2024-06-13 17:18:05] 2024-06-13 21:17:53,835 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-13 17:18:05] 2024-06-13 21:17:53,836 | INFO     | *************************************
[2024-06-13 17:18:05] 2024-06-13 21:17:53,837 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-13 17:18:05] 2024-06-13 21:17:53,837 | INFO     | *************************************
[2024-06-13 17:18:05] 2024-06-13 21:17:53,837 | INFO     | 
[2024-06-13 17:18:05] 2024-06-13 21:17:53,841 | INFO     | architecture information:
[2024-06-13 17:18:05] 2024-06-13 21:17:53,845 | INFO     | executing command: cat /etc/os-release
[2024-06-13 17:18:05] 2024-06-13 21:17:53,868 | INFO     | cat /etc/os-release:
[2024-06-13 17:18:05] NAME="CentOS Linux"
[2024-06-13 17:18:05] VERSION="7 (Core)"
[2024-06-13 17:18:05] ID="centos"
[2024-06-13 17:18:05] ID_LIKE="rhel fedora"
[2024-06-13 17:18:05] VERSION_ID="7"
[2024-06-13 17:18:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-13 17:18:05] ANSI_COLOR="0;31"
[2024-06-13 17:18:05] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-13 17:18:05] HOME_URL="https://www.centos.org/"
[2024-06-13 17:18:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-13 17:18:05] 
[2024-06-13 17:18:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-13 17:18:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-13 17:18:05] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-13 17:18:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-13 17:18:05] 
[2024-06-13 17:18:05] 2024-06-13 21:17:53,868 | INFO     | *************************************
[2024-06-13 17:18:05] 2024-06-13 21:17:54,370 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2024-06-13 17:18:05] 2024-06-13 21:17:54,512 | INFO     | sufficient remaining disk space (93534027776 B)
[2024-06-13 17:18:05] 2024-06-13 21:17:54,512 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-13 17:18:05] 2024-06-13 21:17:54,512 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-13 17:18:05] 2024-06-13 21:17:54,512 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-13 17:18:05] 2024-06-13 21:17:54,513 | INFO     | found 0 job(s) in 20 queues
[2024-06-13 17:18:05] 2024-06-13 21:17:54,513 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-13 17:18:05] 2024-06-13 21:17:54,513 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-13 17:18:05] 2024-06-13 21:17:54,513 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-13 17:18:05] 2024-06-13 21:17:54,517 | INFO     | all job control threads have been joined
[2024-06-13 17:18:05] 2024-06-13 21:17:54,611 | INFO     | all payload control threads have been joined
[2024-06-13 17:18:05] 2024-06-13 21:17:54,687 | INFO     | all data control threads have been joined
[2024-06-13 17:18:05] 2024-06-13 21:17:54,731 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-13 17:18:05] 2024-06-13 21:17:54,731 | INFO     | aborting loop
[2024-06-13 17:18:05] 2024-06-13 21:17:54,747 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-13 17:18:05] 2024-06-13 21:17:55,518 | INFO     | [job] retrieve thread has finished
[2024-06-13 17:18:05] 2024-06-13 21:17:55,523 | INFO     | [job] control thread has finished
[2024-06-13 17:18:05] 2024-06-13 21:17:55,554 | INFO     | [job] create_data_payload thread has finished
[2024-06-13 17:18:05] 2024-06-13 21:17:55,616 | INFO     | [payload] control thread has finished
[2024-06-13 17:18:05] 2024-06-13 21:17:55,693 | INFO     | [data] control thread has finished
[2024-06-13 17:18:05] 2024-06-13 21:17:55,737 | INFO     | [job] job monitor thread has finished
[2024-06-13 17:18:05] 2024-06-13 21:17:55,897 | INFO     | [job] validate thread has finished
[2024-06-13 17:18:05] 2024-06-13 21:17:56,418 | INFO     | [data] copytool_in thread has finished
[2024-06-13 17:18:05] 2024-06-13 21:17:56,434 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-13 17:18:05] 2024-06-13 21:17:56,438 | INFO     | [payload] validate_pre thread has finished
[2024-06-13 17:18:05] 2024-06-13 21:17:56,520 | INFO     | [data] copytool_out thread has finished
[2024-06-13 17:18:05] 2024-06-13 21:17:56,673 | INFO     | [payload] validate_post thread has finished
[2024-06-13 17:18:05] 2024-06-13 21:17:56,730 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-13 17:18:05] 2024-06-13 21:17:56,822 | INFO     | [payload] execute_payloads thread has finished
[2024-06-13 17:18:05] 2024-06-13 21:17:57,006 | INFO     | [payload] failed_post thread has finished
[2024-06-13 17:18:05] 2024-06-13 21:17:57,440 | INFO     | [job] queue monitor thread has finished
[2024-06-13 17:18:05] 2024-06-13 21:17:58,756 | INFO     | [data] queue_monitor thread has finished
[2024-06-13 17:18:05] 2024-06-13 21:17:59,294 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139909993060160)>', '<ExcThread(monitor, started 139909415294720)>']
[2024-06-13 17:18:05] 2024-06-13 21:17:59,542 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-13 17:18:05] 2024-06-13 21:17:59,542 | INFO     | [monitor] control thread has ended
[2024-06-13 17:18:05] 2024-06-13 21:18:04,320 | INFO     | all workflow threads have been joined
[2024-06-13 17:18:05] 2024-06-13 21:18:04,320 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-13 17:18:05] 2024-06-13 21:18:04,320 | INFO     | traces error code: 0
[2024-06-13 17:18:05] 2024-06-13 21:18:04,321 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-13 17:18:05] 2024-06-13 21:18:04,421 [wrapper] ==== pilot stdout END ====
[2024-06-13 17:18:05] 2024-06-13 21:18:04,440 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-13 17:18:05] 2024-06-13 21:18:04,450 [wrapper] pilotpid: 85216
[2024-06-13 17:18:05] 2024-06-13 21:18:04,487 [wrapper] Pilot exit status: 0
[2024-06-13 17:18:05] 2024-06-13 21:18:04,642 [wrapper] pandaids: 6229311353
[2024-06-13 17:18:05] 2024-06-13 21:18:04,872 [wrapper] cleanup supervisor_pilot 67526 85217
[2024-06-13 17:18:05] 2024-06-13 21:18:04,912 [wrapper] Test setup, not cleaning
[2024-06-13 17:18:05] 2024-06-13 21:18:04,956 [wrapper] ==== wrapper stdout END ====
[2024-06-13 17:18:05] 2024-06-13 21:18:05,002 [wrapper] ==== wrapper stderr END ====
[2024-06-13 17:18:05] 2024-06-13 21:18:05,082 [wrapper] apfmon messages muted
[2024-06-13 17:18:05]  *** Error codes and diagnostics ***
[2024-06-13 17:18:05]     "exeErrorCode": 0,
[2024-06-13 17:18:05]     "exeErrorDiag": "",
[2024-06-13 17:18:05]     "pilotErrorCode": 0,
[2024-06-13 17:18:05]     "pilotErrorDiag": "",
[2024-06-13 17:18:05]  *** Listing of results directory ***
[2024-06-13 17:18:05] total 876740
[2024-06-13 17:18:05] -rw-r--r-- 1 boincer umatlas    469766 Jun 13 07:01 pilot3.tar.gz
[2024-06-13 17:18:05] -rw-r--r-- 1 boincer umatlas      5654 Jun 13 07:19 queuedata.json
[2024-06-13 17:18:05] -rwx------ 1 boincer umatlas     32308 Jun 13 07:21 runpilot2-wrapper.sh
[2024-06-13 17:18:05] -rw-r--r-- 1 boincer umatlas       100 Jun 13 10:51 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-13 17:18:05] -rwxr-xr-x 1 boincer umatlas      7986 Jun 13 10:51 run_atlas
[2024-06-13 17:18:05] -rw-r--r-- 1 boincer umatlas       105 Jun 13 10:51 job.xml
[2024-06-13 17:18:05] -rw-r--r-- 2 boincer umatlas 541730712 Jun 13 10:51 EVNT.38776210._000173.pool.root.1
[2024-06-13 17:18:05] -rw-r--r-- 2 boincer umatlas     17537 Jun 13 10:51 start_atlas.sh
[2024-06-13 17:18:05] drwxrwx--x 2 boincer umatlas      4096 Jun 13 10:51 shared
[2024-06-13 17:18:05] -rw-r--r-- 2 boincer umatlas    482542 Jun 13 10:51 input.tar.gz
[2024-06-13 17:18:05] -rw-r--r-- 1 boincer umatlas         0 Jun 13 10:51 boinc_lockfile
[2024-06-13 17:18:05] -rw-r--r-- 1 boincer umatlas      2645 Jun 13 10:51 pandaJob.out
[2024-06-13 17:18:05] -rw------- 1 boincer umatlas       467 Jun 13 10:51 setup.sh.local
[2024-06-13 17:18:05] -rw------- 1 boincer umatlas   1024833 Jun 13 10:51 agis_schedconf.cvmfs.json
[2024-06-13 17:18:05] -rw------- 1 boincer umatlas   1316790 Jun 13 10:51 cric_ddmendpoints.json
[2024-06-13 17:18:05] drwx------ 4 boincer umatlas      4096 Jun 13 10:51 pilot3
[2024-06-13 17:18:05] -rw-r--r-- 1 boincer umatlas      6390 Jun 13 17:12 init_data.xml
[2024-06-13 17:18:05] -rw------- 1 boincer umatlas 347089347 Jun 13 17:16 HITS.38921013._028738.pool.root.1
[2024-06-13 17:18:05] -rw------- 1 boincer umatlas        95 Jun 13 17:17 pilot_heartbeat.json
[2024-06-13 17:18:05] -rw-r--r-- 1 boincer umatlas       532 Jun 13 17:17 boinc_task_state.xml
[2024-06-13 17:18:05] -rw------- 1 boincer umatlas      1073 Jun 13 17:17 memory_monitor_summary.json
[2024-06-13 17:18:05] -rw------- 1 boincer umatlas         0 Jun 13 17:17 agis_ddmendpoints.agis.ALL.json
[2024-06-13 17:18:05] -rw------- 1 boincer umatlas    503391 Jun 13 17:17 log.38921013._028738.job.log.tgz.1
[2024-06-13 17:18:05] -rw------- 1 boincer umatlas      7741 Jun 13 17:17 heartbeat.json
[2024-06-13 17:18:05] -rw-r--r-- 1 boincer umatlas      8192 Jun 13 17:18 boinc_mmap_file
[2024-06-13 17:18:05] -rw-r--r-- 1 boincer umatlas        29 Jun 13 17:18 wrapper_checkpoint.txt
[2024-06-13 17:18:05] -rw------- 1 boincer umatlas      4334 Jun 13 17:18 pilotlog.txt
[2024-06-13 17:18:05] -rw------- 1 boincer umatlas   2208082 Jun 13 17:18 log.38921013._028738.job.log.1
[2024-06-13 17:18:05] -rw------- 1 boincer umatlas       357 Jun 13 17:18 output.list
[2024-06-13 17:18:05] -rw-r--r-- 1 boincer umatlas       620 Jun 13 17:18 runtime_log
[2024-06-13 17:18:05] -rw------- 1 boincer umatlas   2734080 Jun 13 17:18 result.tar.gz
[2024-06-13 17:18:05] -rw-r--r-- 1 boincer umatlas     11405 Jun 13 17:18 runtime_log.err
[2024-06-13 17:18:05] -rw------- 1 boincer umatlas       652 Jun 13 17:18 RkDMDmUhxb5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmK8SKDmL8E1Im.diag
[2024-06-13 17:18:05] -rw-r--r-- 1 boincer umatlas     21934 Jun 13 17:18 stderr.txt
[2024-06-13 17:18:05] HITS file was successfully produced:
[2024-06-13 17:18:05] -rw------- 1 boincer umatlas 347089347 Jun 13 17:16 shared/HITS.pool.root.1
[2024-06-13 17:18:05]  *** Contents of shared directory: ***
[2024-06-13 17:18:05] total 871164
[2024-06-13 17:18:05] -rw-r--r-- 2 boincer umatlas 541730712 Jun 13 10:51 ATLAS.root_0
[2024-06-13 17:18:05] -rw-r--r-- 2 boincer umatlas     17537 Jun 13 10:51 start_atlas.sh
[2024-06-13 17:18:05] -rw-r--r-- 2 boincer umatlas    482542 Jun 13 10:51 input.tar.gz
[2024-06-13 17:18:05] -rw------- 1 boincer umatlas 347089347 Jun 13 17:16 HITS.pool.root.1
[2024-06-13 17:18:05] -rw------- 1 boincer umatlas   2734080 Jun 13 17:18 result.tar.gz
17:18:06 (80992): run_atlas exited; CPU time 128340.278849
17:18:06 (80992): called boinc_finish(0)

</stderr_txt>
]]>

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