Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:59:04 (72785): wrapper (7.7.26015): starting
10:59:04 (72785): wrapper: running run_atlas (--nthreads 8)
[2024-06-13 10:59:04] Arguments: --nthreads 8
[2024-06-13 10:59:04] Threads: 8
[2024-06-13 10:59:04] Checking for CVMFS
[2024-06-13 10:59:04] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-13 10:59:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-13 10:59:04] Running cvmfs_config stat atlas.cern.ch
[2024-06-13 10:59:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-13 10:59:04] 2.11.2.0 92756 3149 168060 133834 1 423 13148938 18432000 10376 130560 0 12029946 98.573 30802418 53427 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-06-13 10:59:04] CVMFS is ok
[2024-06-13 10:59:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-13 10:59:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-13 10:59:04] Further information can be found at the LHC@home message board.
[2024-06-13 10:59:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-13 10:59:04] Checking for apptainer binary...
[2024-06-13 10:59:04] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-13 10:59:04] Running /usr/bin/apptainer --version
[2024-06-13 10:59:04] apptainer version 1.3.1-1.el7
[2024-06-13 10:59:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-13 10:59:05] c-212-11.aglt2.org
[2024-06-13 10:59:05] apptainer works
[2024-06-13 10:59:05] Set ATHENA_PROC_NUMBER=8
[2024-06-13 10:59:05] Set ATHENA_CORE_NUMBER=8
[2024-06-13 10:59:05] Starting ATLAS job with PandaID=6229309737
[2024-06-13 10:59:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-13 16:25:56]  *** The last 200 lines of the pilot log: ***
[2024-06-13 16:25:56] 2024-06-13 20:25:34,774 | WARNING  | process 85305 is no longer using CPU - aborting
[2024-06-13 16:25:56] 2024-06-13 20:25:35,280 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-06-13 16:25:56] 2024-06-13 20:25:36,357 | INFO     | job 6229309737 has state=finished
[2024-06-13 16:25:56] 2024-06-13 20:25:36,358 | INFO     | preparing for final server update for job 6229309737 in state='finished'
[2024-06-13 16:25:56] 2024-06-13 20:25:36,358 | INFO     | this job has now completed (state=finished)
[2024-06-13 16:25:56] 2024-06-13 20:25:36,358 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-06-13 16:25:56] 2024-06-13 20:25:36,358 | INFO     | job 6229309737 has finished - writing final server update
[2024-06-13 16:25:56] 2024-06-13 20:25:36,359 | INFO     | total number of processed events: 400 (read)
[2024-06-13 16:25:56] 2024-06-13 20:25:36,365 | INFO     | executing command: lscpu
[2024-06-13 16:25:56] 2024-06-13 20:25:36,405 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-06-13 16:25:56] 2024-06-13 20:25:36,405 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-06-13 16:25:56] 2024-06-13 20:25:36,439 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-06-13 16:25:56] 2024-06-13 20:25:37,278 | INFO     | monitor loop #1483: job 0:6229309737 is in state 'finished'
[2024-06-13 16:25:56] 2024-06-13 20:25:37,278 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-13 16:25:56] 2024-06-13 20:25:39,470 | INFO     | CPU arch script returned: x86-64-v3
[2024-06-13 16:25:56] 2024-06-13 20:25:39,470 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6229309737/memory_monitor_summary.json (trf name=prmon)
[2024-06-13 16:25:56] 2024-06-13 20:25:39,471 | INFO     | extracted standard info from prmon json
[2024-06-13 16:25:56] 2024-06-13 20:25:39,471 | INFO     | extracted standard memory fields from prmon json
[2024-06-13 16:25:56] 2024-06-13 20:25:39,471 | WARNING  | GPU info not found in prmon json
[2024-06-13 16:25:56] 2024-06-13 20:25:39,472 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-13 16:25:56] 2024-06-13 20:25:39,472 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-13 16:25:56] 2024-06-13 20:25:39,477 | INFO     | fitting pss+swap vs Time
[2024-06-13 16:25:56] 2024-06-13 20:25:39,478 | INFO     | model: linear, x: [1718290773.0, 1718290834.0, 1718290895.0, 1718290956.0, 1718291017.0, 1718291078.0, 1718291139.0, 1718291200.0, 1718291261.0, 1718291322.0, 1718
[2024-06-13 16:25:56] 2024-06-13 20:25:39,478 | INFO     | sum of square deviations: 10256266599.987541
[2024-06-13 16:25:56] 2024-06-13 20:25:39,480 | INFO     | sum of deviations: 563264506765.6016
[2024-06-13 16:25:56] 2024-06-13 20:25:39,480 | INFO     | mean x: 1718300533.0062306
[2024-06-13 16:25:56] 2024-06-13 20:25:39,480 | INFO     | mean y: 2350815.1993769472
[2024-06-13 16:25:56] 2024-06-13 20:25:39,480 | INFO     | -- intersect: -94365096906.9572
[2024-06-13 16:25:56] 2024-06-13 20:25:39,480 | INFO     | intersect: -94365096906.9572
[2024-06-13 16:25:56] 2024-06-13 20:25:39,480 | INFO     | chi2: 16.647402594967446
[2024-06-13 16:25:56] 2024-06-13 20:25:39,481 | INFO     | model: linear, x: [1718290773.0, 1718290834.0, 1718290895.0, 1718290956.0, 1718291017.0, 1718291078.0, 1718291139.0, 1718291200.0, 1718291261.0, 1718291322.0, 1718
[2024-06-13 16:25:56] 2024-06-13 20:25:39,481 | INFO     | sum of square deviations: 9784425804.987423
[2024-06-13 16:25:56] 2024-06-13 20:25:39,483 | INFO     | sum of deviations: 575800917971.0511
[2024-06-13 16:25:56] 2024-06-13 20:25:39,483 | INFO     | mean x: 1718300380.506329
[2024-06-13 16:25:56] 2024-06-13 20:25:39,483 | INFO     | mean y: 2354771.224683544
[2024-06-13 16:25:56] 2024-06-13 20:25:39,483 | INFO     | -- intersect: -101117420284.07019
[2024-06-13 16:25:56] 2024-06-13 20:25:39,483 | INFO     | intersect: -101117420284.07019
[2024-06-13 16:25:56] 2024-06-13 20:25:39,483 | INFO     | chi2: 15.734110935222835
[2024-06-13 16:25:56] 2024-06-13 20:25:39,484 | INFO     | current chi2=15.734110935222835 (change=5.486091025519505 %)
[2024-06-13 16:25:56] 2024-06-13 20:25:39,484 | INFO     | right removable region: 315
[2024-06-13 16:25:56] 2024-06-13 20:25:39,484 | INFO     | model: linear, x: [1718291078.0, 1718291139.0, 1718291200.0, 1718291261.0, 1718291322.0, 1718291383.0, 1718291444.0, 1718291505.0, 1718291566.0, 1718291627.0, 1718
[2024-06-13 16:25:56] 2024-06-13 20:25:39,484 | INFO     | sum of square deviations: 9784424584.987425
[2024-06-13 16:25:56] 2024-06-13 20:25:39,486 | INFO     | sum of deviations: 470176180644.5317
[2024-06-13 16:25:56] 2024-06-13 20:25:39,486 | INFO     | mean x: 1718300685.506329
[2024-06-13 16:25:56] 2024-06-13 20:25:39,486 | INFO     | mean y: 2380861.734177215
[2024-06-13 16:25:56] 2024-06-13 20:25:39,486 | INFO     | -- intersect: -82568039758.58939
[2024-06-13 16:25:56] 2024-06-13 20:25:39,486 | INFO     | intersect: -82568039758.58939
[2024-06-13 16:25:56] 2024-06-13 20:25:39,487 | INFO     | chi2: 13.021400806367094
[2024-06-13 16:25:56] 2024-06-13 20:25:39,487 | INFO     | current chi2=13.021400806367094 (change=21.781186391782832 %)
[2024-06-13 16:25:56] 2024-06-13 20:25:39,487 | INFO     | left removable region: 10
[2024-06-13 16:25:56] 2024-06-13 20:25:39,487 | INFO     | model: linear, x: [1718291383.0, 1718291444.0, 1718291505.0, 1718291566.0, 1718291627.0, 1718291688.0, 1718291749.0, 1718291810.0, 1718291871.0, 1718291932.0, 1718
[2024-06-13 16:25:56] 2024-06-13 20:25:39,487 | INFO     | sum of square deviations: 8797782951.986864
[2024-06-13 16:25:56] 2024-06-13 20:25:39,489 | INFO     | sum of deviations: 408172849711.6785
[2024-06-13 16:25:56] 2024-06-13 20:25:39,489 | INFO     | mean x: 1718300655.0065575
[2024-06-13 16:25:56] 2024-06-13 20:25:39,489 | INFO     | mean y: 2410327.160655738
[2024-06-13 16:25:56] 2024-06-13 20:25:39,489 | INFO     | -- intersect: -79718091854.25273
[2024-06-13 16:25:56] 2024-06-13 20:25:39,489 | INFO     | intersect: -79718091854.25273
[2024-06-13 16:25:56] 2024-06-13 20:25:39,490 | INFO     | chi2: 10.037820084900158
[2024-06-13 16:25:56] 2024-06-13 20:25:39,490 | INFO     | -- intersect: -79718091854.25273
[2024-06-13 16:25:56] 2024-06-13 20:25:39,490 | INFO     | current memory leak: 46.39 B/s (using 305 data points, chi2=10.04)
[2024-06-13 16:25:56] 2024-06-13 20:25:39,490 | INFO     | ..............................
[2024-06-13 16:25:56] 2024-06-13 20:25:39,490 | INFO     | . Timing measurements:
[2024-06-13 16:25:56] 2024-06-13 20:25:39,490 | INFO     | . get job = 0 s
[2024-06-13 16:25:56] 2024-06-13 20:25:39,490 | INFO     | . initial setup = 1 s
[2024-06-13 16:25:56] 2024-06-13 20:25:39,490 | INFO     | . payload setup = 3 s
[2024-06-13 16:25:56] 2024-06-13 20:25:39,491 | INFO     | . stage-in = 0 s
[2024-06-13 16:25:56] 2024-06-13 20:25:39,491 | INFO     | . payload execution = 19557 s
[2024-06-13 16:25:56] 2024-06-13 20:25:39,491 | INFO     | . stage-out = 1 s
[2024-06-13 16:25:56] 2024-06-13 20:25:39,491 | INFO     | . log creation = 0 s
[2024-06-13 16:25:56] 2024-06-13 20:25:39,491 | INFO     | ..............................
[2024-06-13 16:25:56] 2024-06-13 20:25:39,579 | INFO     | 
[2024-06-13 16:25:56] 2024-06-13 20:25:39,579 | INFO     | job summary report
[2024-06-13 16:25:56] 2024-06-13 20:25:39,579 | INFO     | --------------------------------------------------
[2024-06-13 16:25:56] 2024-06-13 20:25:39,579 | INFO     | PanDA job id: 6229309737
[2024-06-13 16:25:56] 2024-06-13 20:25:39,580 | INFO     | task id: 38921001
[2024-06-13 16:25:56] 2024-06-13 20:25:39,580 | INFO     | errors: (none)
[2024-06-13 16:25:56] 2024-06-13 20:25:39,580 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-13 16:25:56] 2024-06-13 20:25:39,580 | INFO     | pilot state: finished 
[2024-06-13 16:25:56] 2024-06-13 20:25:39,580 | INFO     | transexitcode: 0
[2024-06-13 16:25:56] 2024-06-13 20:25:39,580 | INFO     | exeerrorcode: 0
[2024-06-13 16:25:56] 2024-06-13 20:25:39,580 | INFO     | exeerrordiag: 
[2024-06-13 16:25:56] 2024-06-13 20:25:39,580 | INFO     | exitcode: 0
[2024-06-13 16:25:56] 2024-06-13 20:25:39,580 | INFO     | exitmsg: OK
[2024-06-13 16:25:56] 2024-06-13 20:25:39,580 | INFO     | cpuconsumptiontime: 108926 s
[2024-06-13 16:25:56] 2024-06-13 20:25:39,580 | INFO     | nevents: 400
[2024-06-13 16:25:56] 2024-06-13 20:25:39,580 | INFO     | neventsw: 0
[2024-06-13 16:25:56] 2024-06-13 20:25:39,580 | INFO     | pid: 85305
[2024-06-13 16:25:56] 2024-06-13 20:25:39,580 | INFO     | pgrp: 85305
[2024-06-13 16:25:56] 2024-06-13 20:25:39,580 | INFO     | corecount: 8
[2024-06-13 16:25:56] 2024-06-13 20:25:39,580 | INFO     | event service: False
[2024-06-13 16:25:56] 2024-06-13 20:25:39,581 | INFO     | sizes: {0: 2379117, 3: 2379323, 11: 2379351, 19564: 2412343, 19566: 2421303, 19569: 2421359, 19573: 2421657}
[2024-06-13 16:25:56] 2024-06-13 20:25:39,581 | INFO     | --------------------------------------------------
[2024-06-13 16:25:56] 2024-06-13 20:25:39,581 | INFO     | 
[2024-06-13 16:25:56] 2024-06-13 20:25:39,581 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2024-06-13 16:25:56] 2024-06-13 20:25:39,603 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-13 16:25:56] 2024-06-13 20:25:39,604 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-13 16:25:56] 2024-06-13 20:25:39,604 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-13 16:25:56] 2024-06-13 20:25:39,604 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-13 16:25:56] 2024-06-13 20:25:39,604 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-13 16:25:56] 2024-06-13 20:25:39,604 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-13 16:25:56] 2024-06-13 20:25:39,604 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-13 16:25:56] 2024-06-13 20:25:39,604 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-13 16:25:56] 2024-06-13 20:25:39,604 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-13 16:25:56] 2024-06-13 20:25:39,604 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-13 16:25:56] 2024-06-13 20:25:39,604 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-13 16:25:56] 2024-06-13 20:25:39,604 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-13 16:25:56] 2024-06-13 20:25:39,604 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-13 16:25:56] 2024-06-13 20:25:39,604 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-13 16:25:56] 2024-06-13 20:25:39,605 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-13 16:25:56] 2024-06-13 20:25:39,605 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-13 16:25:56] 2024-06-13 20:25:39,605 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-13 16:25:56] 2024-06-13 20:25:39,605 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-13 16:25:56] 2024-06-13 20:25:39,605 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-13 16:25:56] 2024-06-13 20:25:39,605 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-13 16:25:56] 2024-06-13 20:25:39,605 | INFO     | job 6229309737 has completed (purged errors)
[2024-06-13 16:25:56] 2024-06-13 20:25:39,605 | INFO     | overall cleanup function is called
[2024-06-13 16:25:56] 2024-06-13 20:25:40,613 | INFO     | --- collectZombieJob: --- 10, [85305]
[2024-06-13 16:25:56] 2024-06-13 20:25:40,614 | INFO     | zombie collector waiting for pid 85305
[2024-06-13 16:25:56] 2024-06-13 20:25:40,614 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-13 16:25:56] 2024-06-13 20:25:41,619 | INFO     | collected zombie processes
[2024-06-13 16:25:56] 2024-06-13 20:25:41,619 | INFO     | will now attempt to kill all subprocesses of pid=85305
[2024-06-13 16:25:56] 2024-06-13 20:25:41,740 | INFO     | process IDs to be killed: [85305] (in reverse order)
[2024-06-13 16:25:56] 2024-06-13 20:25:41,819 | WARNING  | found no corresponding commands to process id(s)
[2024-06-13 16:25:56] 2024-06-13 20:25:41,820 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-13 16:25:56] 2024-06-13 20:25:41,830 | INFO     | did not find any defunct processes belonging to 85305
[2024-06-13 16:25:56] 2024-06-13 20:25:41,840 | INFO     | did not find any defunct processes belonging to 85305
[2024-06-13 16:25:56] 2024-06-13 20:25:41,840 | INFO     | ready for new job
[2024-06-13 16:25:56] 2024-06-13 20:25:41,840 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-13 16:25:56] 2024-06-13 20:25:41,842 | INFO     | *************************************
[2024-06-13 16:25:56] 2024-06-13 20:25:41,843 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-13 16:25:56] 2024-06-13 20:25:41,843 | INFO     | *************************************
[2024-06-13 16:25:56] 2024-06-13 20:25:41,843 | INFO     | 
[2024-06-13 16:25:56] 2024-06-13 20:25:41,847 | INFO     | architecture information:
[2024-06-13 16:25:56] 2024-06-13 20:25:41,847 | INFO     | executing command: cat /etc/os-release
[2024-06-13 16:25:56] 2024-06-13 20:25:41,858 | INFO     | cat /etc/os-release:
[2024-06-13 16:25:56] NAME="CentOS Linux"
[2024-06-13 16:25:56] VERSION="7 (Core)"
[2024-06-13 16:25:56] ID="centos"
[2024-06-13 16:25:56] ID_LIKE="rhel fedora"
[2024-06-13 16:25:56] VERSION_ID="7"
[2024-06-13 16:25:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-13 16:25:56] ANSI_COLOR="0;31"
[2024-06-13 16:25:56] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-13 16:25:56] HOME_URL="https://www.centos.org/"
[2024-06-13 16:25:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-13 16:25:56] 
[2024-06-13 16:25:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-13 16:25:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-13 16:25:56] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-13 16:25:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-13 16:25:56] 
[2024-06-13 16:25:56] 2024-06-13 20:25:41,859 | INFO     | *************************************
[2024-06-13 16:25:56] 2024-06-13 20:25:42,361 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2024-06-13 16:25:56] 2024-06-13 20:25:42,378 | INFO     | sufficient remaining disk space (90123010048 B)
[2024-06-13 16:25:56] 2024-06-13 20:25:42,379 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-13 16:25:56] 2024-06-13 20:25:42,379 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-13 16:25:56] 2024-06-13 20:25:42,635 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-13 16:25:56] 2024-06-13 20:25:42,686 | INFO     | found 0 job(s) in 20 queues
[2024-06-13 16:25:56] 2024-06-13 20:25:42,687 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-13 16:25:56] 2024-06-13 20:25:42,687 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-13 16:25:56] 2024-06-13 20:25:43,092 | INFO     | all payload control threads have been joined
[2024-06-13 16:25:56] 2024-06-13 20:25:43,294 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-13 16:25:56] 2024-06-13 20:25:43,294 | INFO     | aborting loop
[2024-06-13 16:25:56] 2024-06-13 20:25:43,384 | INFO     | [job] retrieve thread has finished
[2024-06-13 16:25:56] 2024-06-13 20:25:43,418 | INFO     | all data control threads have been joined
[2024-06-13 16:25:56] 2024-06-13 20:25:43,489 | INFO     | [payload] execute_payloads thread has finished
[2024-06-13 16:25:56] 2024-06-13 20:25:43,541 | INFO     | [data] copytool_in thread has finished
[2024-06-13 16:25:56] 2024-06-13 20:25:43,652 | INFO     | [job] validate thread has finished
[2024-06-13 16:25:56] 2024-06-13 20:25:43,715 | INFO     | [job] create_data_payload thread has finished
[2024-06-13 16:25:56] 2024-06-13 20:25:43,741 | INFO     | all job control threads have been joined
[2024-06-13 16:25:56] 2024-06-13 20:25:43,961 | INFO     | [payload] validate_pre thread has finished
[2024-06-13 16:25:56] 2024-06-13 20:25:44,099 | INFO     | [payload] control thread has finished
[2024-06-13 16:25:56] 2024-06-13 20:25:44,185 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-13 16:25:56] 2024-06-13 20:25:44,300 | INFO     | [job] job monitor thread has finished
[2024-06-13 16:25:56] 2024-06-13 20:25:44,351 | INFO     | [payload] validate_post thread has finished
[2024-06-13 16:25:56] 2024-06-13 20:25:44,424 | INFO     | [data] control thread has finished
[2024-06-13 16:25:56] 2024-06-13 20:25:44,577 | INFO     | [payload] failed_post thread has finished
[2024-06-13 16:25:56] 2024-06-13 20:25:44,592 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-13 16:25:56] 2024-06-13 20:25:44,642 | INFO     | [data] copytool_out thread has finished
[2024-06-13 16:25:56] 2024-06-13 20:25:44,746 | INFO     | [job] control thread has finished
[2024-06-13 16:25:56] 2024-06-13 20:25:45,597 | INFO     | [job] queue monitor thread has finished
[2024-06-13 16:25:56] 2024-06-13 20:25:45,849 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-13 16:25:56] 2024-06-13 20:25:49,855 | INFO     | [data] queue_monitor thread has finished
[2024-06-13 16:25:56] 2024-06-13 20:25:51,071 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139820032923456)>', '<ExcThread(monitor, started 139819724281600)>']
[2024-06-13 16:25:56] 2024-06-13 20:25:51,738 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-13 16:25:56] 2024-06-13 20:25:51,738 | INFO     | [monitor] control thread has ended
[2024-06-13 16:25:56] 2024-06-13 20:25:56,097 | INFO     | all workflow threads have been joined
[2024-06-13 16:25:56] 2024-06-13 20:25:56,097 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-13 16:25:56] 2024-06-13 20:25:56,098 | INFO     | traces error code: 0
[2024-06-13 16:25:56] 2024-06-13 20:25:56,098 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-13 16:25:56] 2024-06-13 20:25:56,204 [wrapper] ==== pilot stdout END ====
[2024-06-13 16:25:56] 2024-06-13 20:25:56,207 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-13 16:25:56] 2024-06-13 20:25:56,209 [wrapper] pilotpid: 77052
[2024-06-13 16:25:56] 2024-06-13 20:25:56,211 [wrapper] Pilot exit status: 0
[2024-06-13 16:25:56] 2024-06-13 20:25:56,219 [wrapper] pandaids: 6229309737
[2024-06-13 16:25:56] 2024-06-13 20:25:56,297 [wrapper] cleanup supervisor_pilot 17796 77053
[2024-06-13 16:25:56] 2024-06-13 20:25:56,299 [wrapper] Test setup, not cleaning
[2024-06-13 16:25:56] 2024-06-13 20:25:56,301 [wrapper] ==== wrapper stdout END ====
[2024-06-13 16:25:56] 2024-06-13 20:25:56,302 [wrapper] ==== wrapper stderr END ====
[2024-06-13 16:25:56] 2024-06-13 20:25:56,309 [wrapper] apfmon messages muted
[2024-06-13 16:25:56]  *** Error codes and diagnostics ***
[2024-06-13 16:25:56]     "exeErrorCode": 0,
[2024-06-13 16:25:56]     "exeErrorDiag": "",
[2024-06-13 16:25:56]     "pilotErrorCode": 0,
[2024-06-13 16:25:56]     "pilotErrorDiag": "",
[2024-06-13 16:25:56]  *** Listing of results directory ***
[2024-06-13 16:25:56] total 966524
[2024-06-13 16:25:56] -rw-r--r-- 1 boincer umatlas    469766 Jun 13 07:01 pilot3.tar.gz
[2024-06-13 16:25:56] -rw-r--r-- 1 boincer umatlas      5654 Jun 13 07:19 queuedata.json
[2024-06-13 16:25:56] -rwx------ 1 boincer umatlas     32308 Jun 13 07:19 runpilot2-wrapper.sh
[2024-06-13 16:25:56] -rw-r--r-- 1 boincer umatlas       100 Jun 13 10:58 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-13 16:25:56] -rwxr-xr-x 1 boincer umatlas      7986 Jun 13 10:58 run_atlas
[2024-06-13 16:25:56] -rw-r--r-- 1 boincer umatlas       105 Jun 13 10:58 job.xml
[2024-06-13 16:25:56] -rw-r--r-- 2 boincer umatlas 618704639 Jun 13 10:59 EVNT.38776190._000532.pool.root.1
[2024-06-13 16:25:56] -rw-r--r-- 2 boincer umatlas     17537 Jun 13 10:59 start_atlas.sh
[2024-06-13 16:25:56] drwxrwx--x 2 boincer umatlas      4096 Jun 13 10:59 shared
[2024-06-13 16:25:56] -rw-r--r-- 2 boincer umatlas    482526 Jun 13 10:59 input.tar.gz
[2024-06-13 16:25:56] -rw-r--r-- 1 boincer umatlas         0 Jun 13 10:59 boinc_lockfile
[2024-06-13 16:25:56] -rw-r--r-- 1 boincer umatlas      2655 Jun 13 10:59 pandaJob.out
[2024-06-13 16:25:56] -rw------- 1 boincer umatlas       467 Jun 13 10:59 setup.sh.local
[2024-06-13 16:25:56] -rw------- 1 boincer umatlas   1024833 Jun 13 10:59 agis_schedconf.cvmfs.json
[2024-06-13 16:25:56] -rw------- 1 boincer umatlas   1316790 Jun 13 10:59 cric_ddmendpoints.json
[2024-06-13 16:25:56] drwx------ 4 boincer umatlas      4096 Jun 13 10:59 pilot3
[2024-06-13 16:25:56] -rw-r--r-- 1 boincer umatlas      6390 Jun 13 16:22 init_data.xml
[2024-06-13 16:25:56] -rw-r--r-- 1 boincer umatlas       533 Jun 13 16:24 boinc_task_state.xml
[2024-06-13 16:25:56] -rw------- 1 boincer umatlas 362913863 Jun 13 16:24 HITS.38921001._056528.pool.root.1
[2024-06-13 16:25:56] -rw------- 1 boincer umatlas        95 Jun 13 16:25 pilot_heartbeat.json
[2024-06-13 16:25:56] -rw------- 1 boincer umatlas      1067 Jun 13 16:25 memory_monitor_summary.json
[2024-06-13 16:25:56] -rw------- 1 boincer umatlas         0 Jun 13 16:25 agis_ddmendpoints.agis.ALL.json
[2024-06-13 16:25:56] -rw------- 1 boincer umatlas    448562 Jun 13 16:25 log.38921001._056528.job.log.tgz.1
[2024-06-13 16:25:56] -rw------- 1 boincer umatlas      7738 Jun 13 16:25 heartbeat.json
[2024-06-13 16:25:56] -rw-r--r-- 1 boincer umatlas        29 Jun 13 16:25 wrapper_checkpoint.txt
[2024-06-13 16:25:56] -rw-r--r-- 1 boincer umatlas      8192 Jun 13 16:25 boinc_mmap_file
[2024-06-13 16:25:56] -rw------- 1 boincer umatlas      4211 Jun 13 16:25 pilotlog.txt
[2024-06-13 16:25:56] -rw------- 1 boincer umatlas   1834616 Jun 13 16:25 log.38921001._056528.job.log.1
[2024-06-13 16:25:56] -rw------- 1 boincer umatlas       357 Jun 13 16:25 output.list
[2024-06-13 16:25:56] -rw-r--r-- 1 boincer umatlas       620 Jun 13 16:25 runtime_log
[2024-06-13 16:25:56] -rw------- 1 boincer umatlas   2304000 Jun 13 16:25 result.tar.gz
[2024-06-13 16:25:56] -rw------- 1 boincer umatlas       651 Jun 13 16:25 tzZKDmWfxb5n7Olcko1bjSoqABFKDmABFKDmOtvXDmqRoKDmBc2hpm.diag
[2024-06-13 16:25:56] -rw-r--r-- 1 boincer umatlas     11405 Jun 13 16:25 runtime_log.err
[2024-06-13 16:25:56] -rw-r--r-- 1 boincer umatlas     21767 Jun 13 16:25 stderr.txt
[2024-06-13 16:25:56] HITS file was successfully produced:
[2024-06-13 16:25:56] -rw------- 1 boincer umatlas 362913863 Jun 13 16:24 shared/HITS.pool.root.1
[2024-06-13 16:25:56]  *** Contents of shared directory: ***
[2024-06-13 16:25:56] total 961368
[2024-06-13 16:25:56] -rw-r--r-- 2 boincer umatlas 618704639 Jun 13 10:59 ATLAS.root_0
[2024-06-13 16:25:56] -rw-r--r-- 2 boincer umatlas     17537 Jun 13 10:59 start_atlas.sh
[2024-06-13 16:25:56] -rw-r--r-- 2 boincer umatlas    482526 Jun 13 10:59 input.tar.gz
[2024-06-13 16:25:56] -rw------- 1 boincer umatlas 362913863 Jun 13 16:24 HITS.pool.root.1
[2024-06-13 16:25:56] -rw------- 1 boincer umatlas   2304000 Jun 13 16:25 result.tar.gz
16:25:58 (72785): run_atlas exited; CPU time 107803.703098
16:25:58 (72785): called boinc_finish(0)

</stderr_txt>
]]>

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