Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2024-06-19 06:22:24 (28496): Detected: vboxwrapper 26206
2024-06-19 06:22:24 (28496): Detected: BOINC client v8.0.2
2024-06-19 06:22:25 (28496): Detected: VirtualBox VboxManage Interface (Version: 7.0.4)
2024-06-19 06:22:25 (28496): Successfully copied 'init_data.xml' to the shared directory.
2024-06-19 06:22:26 (28496): Create VM. (boinc_b954fd4511dbaeac, slot#2)
2024-06-19 06:22:26 (28496): Setting Memory Size for VM. (4800MB)
2024-06-19 06:22:26 (28496): Setting CPU Count for VM. (8)
2024-06-19 06:22:27 (28496): Setting Chipset Options for VM.
2024-06-19 06:22:27 (28496): Setting Graphics Controller Options for VM.
2024-06-19 06:22:27 (28496): Setting Boot Options for VM.
2024-06-19 06:22:27 (28496): Setting Network Configuration for NAT.
2024-06-19 06:22:28 (28496): Enabling VM Network Access.
2024-06-19 06:22:28 (28496): Disabling USB Support for VM.
2024-06-19 06:22:28 (28496): Disabling COM Port Support for VM.
2024-06-19 06:22:28 (28496): Disabling LPT Port Support for VM.
2024-06-19 06:22:29 (28496): Disabling Audio Support for VM.
2024-06-19 06:22:29 (28496): Disabling Clipboard Support for VM.
2024-06-19 06:22:29 (28496): Disabling Drag and Drop Support for VM.
2024-06-19 06:22:29 (28496): Adding storage controller(s) to VM.
2024-06-19 06:22:30 (28496): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-06-19 06:22:30 (28496): Adding VirtualBox Guest Additions to VM.
2024-06-19 06:22:30 (28496): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-06-19 06:22:31 (28496): forwarding host port 58198 to guest port 80
2024-06-19 06:22:31 (28496): Enabling remote desktop for VM.
2024-06-19 06:22:32 (28496): Enabling shared directory for VM.
2024-06-19 06:22:32 (28496): Starting VM using VBoxManage interface. (boinc_b954fd4511dbaeac, slot#2)
2024-06-19 06:22:39 (28496): Successfully started VM. (PID = '12120')
2024-06-19 06:22:39 (28496): Reporting VM Process ID to BOINC.
2024-06-19 06:22:39 (28496): Guest Log: BIOS: VirtualBox 7.0.4
2024-06-19 06:22:39 (28496): Guest Log: CPUID EDX: 0x178bfbff
2024-06-19 06:22:39 (28496): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-06-19 06:22:39 (28496): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-06-19 06:22:39 (28496): VM state change detected. (old = 'poweredoff', new = 'running')
2024-06-19 06:22:39 (28496): Detected: Web Application Enabled (http://localhost:58198)
2024-06-19 06:22:39 (28496): Detected: Remote Desktop Enabled (localhost:58199)
2024-06-19 06:22:39 (28496): Preference change detected
2024-06-19 06:22:39 (28496): Setting CPU throttle for VM. (100%)
2024-06-19 06:22:39 (28496): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2024-06-19 06:22:41 (28496): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-06-19 06:22:41 (28496): Guest Log: BIOS: Booting from Hard Disk...
2024-06-19 06:22:44 (28496): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-06-19 06:22:44 (28496): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-06-19 06:22:44 (28496): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-06-19 06:22:44 (28496): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-06-19 06:22:44 (28496): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-06-19 06:22:44 (28496): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-06-19 06:22:44 (28496): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-06-19 06:22:44 (28496): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-06-19 06:22:44 (28496): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-06-19 06:22:44 (28496): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-06-19 06:22:44 (28496): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-06-19 06:22:44 (28496): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-06-19 06:22:44 (28496): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-06-19 06:22:44 (28496): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-06-19 06:22:44 (28496): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-06-19 06:22:44 (28496): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-06-19 06:22:44 (28496): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-06-19 06:22:44 (28496): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-06-19 06:22:44 (28496): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-06-19 06:22:44 (28496): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-06-19 06:22:44 (28496): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-06-19 06:22:44 (28496): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-06-19 06:22:44 (28496): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-06-19 06:22:44 (28496): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-06-19 06:22:44 (28496): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-06-19 06:22:44 (28496): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-06-19 06:22:44 (28496): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-06-19 06:22:44 (28496): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-06-19 06:22:44 (28496): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-06-19 06:22:44 (28496): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-06-19 06:22:44 (28496): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-06-19 06:22:44 (28496): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-06-19 06:22:48 (28496): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-06-19 06:22:48 (28496): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-06-19 06:22:52 (28496): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-06-19 06:22:52 (28496): Guest Log: 00:00:00.000122 main     Log opened 2024-06-19T06:22:50.520128000Z
2024-06-19 06:22:52 (28496): Guest Log: 00:00:00.000229 main     OS Product: Linux
2024-06-19 06:22:52 (28496): Guest Log: 00:00:00.000301 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-06-19 06:22:52 (28496): Guest Log: 00:00:00.000360 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-06-19 06:22:52 (28496): Guest Log: 00:00:00.000379 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-06-19 06:22:52 (28496): Guest Log: 00:00:00.000379 main     Process ID: 1366
2024-06-19 06:22:52 (28496): Guest Log: 00:00:00.000379 main     Package type: LINUX_64BITS_GENERIC
2024-06-19 06:22:52 (28496): Guest Log: 00:00:00.000910 main     5.2.32 r132073 started. Verbose level = 0
2024-06-19 06:22:52 (28496): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-06-19 06:22:52 (28496): Guest Log: [INFO] Mounting shared directory
2024-06-19 06:22:53 (28496): Guest Log: [INFO] Checking for init_data.xml
2024-06-19 06:23:02 (28496): Guest Log: 00:00:10.005675 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 175 087 000ns (GuestNow=1 718 774 582 348 268 000 ns GuestLast=1 718 778 170 523 355 000 ns fSetTimeLastLoop=true )
2024-06-19 06:23:07 (28496): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-06-19 06:23:07 (28496): Guest Log: [INFO] Detected branch: prod
2024-06-19 06:23:09 (28496): Guest Log: This is the prod version of the ATLAS job wrapper
2024-06-19 06:23:09 (28496): Guest Log: Copying input files
2024-06-19 06:23:11 (28496): Guest Log: Copied input files into RunAtlas.
2024-06-19 06:23:11 (28496): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-06-19 06:23:11 (28496): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-06-19 06:23:11 (28496): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-06-19 06:23:11 (28496): Guest Log: Further information can be found at the LHC@home message board.
2024-06-19 06:24:28 (28496): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-06-19 06:24:29 (28496): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-06-19 06:24:29 (28496): Guest Log: 2.6.3.0 1665 1 30128 134040 4 1 3117205 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2024-06-19 06:24:29 (28496): Guest Log: copied the webapp to /var/www
2024-06-19 06:24:29 (28496): Guest Log: ATHENA_PROC_NUMBER=8
2024-06-19 06:24:29 (28496): Guest Log: ATHENA_CORE_NUMBER=8
2024-06-19 06:24:30 (28496): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-06-19 06:24:30 (28496): Guest Log:  *** Starting ATLAS job. (PandaID=6228634994 taskID=38921001) ***
2024-06-19 08:02:42 (28496): Status Report: Elapsed Time: '6000.000000'
2024-06-19 08:02:42 (28496): Status Report: CPU Time: '34852.703125'
2024-06-19 09:42:45 (28496): Status Report: Elapsed Time: '12000.000000'
2024-06-19 09:42:45 (28496): Status Report: CPU Time: '82260.218750'
2024-06-19 10:28:38 (28496): Guest Log:  *** Job finished ***
2024-06-19 10:28:38 (28496): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-06-19 10:28:38 (28496): Guest Log: 2024-06-19 09:28:21,748 | INFO     | [job] queue monitor thread has finished
2024-06-19 10:28:38 (28496): Guest Log: 2024-06-19 09:28:21,994 | INFO     | [data] copytool_out thread has finished
2024-06-19 10:28:38 (28496): Guest Log: 2024-06-19 09:28:25,758 | INFO     | [data] queue_monitor thread has finished
2024-06-19 10:28:38 (28496): Guest Log: 2024-06-19 09:28:26,513 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140617953236800)>', '<ExcThread(monitor, started 140617061480192)>']
2024-06-19 10:28:38 (28496): Guest Log: 2024-06-19 09:28:26,611 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-06-19 10:28:38 (28496): Guest Log: 2024-06-19 09:28:26,611 | INFO     | [monitor] control thread has ended
2024-06-19 10:28:38 (28496): Guest Log: 2024-06-19 09:28:31,518 | INFO     | all workflow threads have been joined
2024-06-19 10:28:38 (28496): Guest Log: 2024-06-19 09:28:31,518 | INFO     | end of generic workflow (traces error code: 0)
2024-06-19 10:28:38 (28496): Guest Log: 2024-06-19 09:28:31,519 | INFO     | traces error code: 0
2024-06-19 10:28:38 (28496): Guest Log: 2024-06-19 09:28:31,519 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-06-19 10:28:38 (28496): Guest Log: 2024-06-19 09:28:31,745 [wrapper] ==== pilot stdout END ====
2024-06-19 10:28:38 (28496): Guest Log: 2024-06-19 09:28:31,766 [wrapper] ==== wrapper stdout RESUME ====
2024-06-19 10:28:38 (28496): Guest Log: 2024-06-19 09:28:31,795 [wrapper] pilotpid: 6726
2024-06-19 10:28:38 (28496): Guest Log: 2024-06-19 09:28:31,811 [wrapper] Pilot exit status: 0
2024-06-19 10:28:38 (28496): Guest Log: 2024-06-19 09:28:31,941 [wrapper] pandaids: 6228634994
2024-06-19 10:28:38 (28496): Guest Log: 2024-06-19 09:28:32,011 [wrapper] cleanup supervisor_pilot 16167 6727
2024-06-19 10:28:38 (28496): Guest Log: 2024-06-19 09:28:32,029 [wrapper] Test setup, not cleaning
2024-06-19 10:28:38 (28496): Guest Log: 2024-06-19 09:28:32,037 [wrapper] ==== wrapper stdout END ====
2024-06-19 10:28:38 (28496): Guest Log: 2024-06-19 09:28:32,051 [wrapper] ==== wrapper stderr END ====
2024-06-19 10:28:38 (28496): Guest Log: 2024-06-19 09:28:32,072 [wrapper] apfmon messages muted
2024-06-19 10:28:38 (28496): Guest Log:  *** Error codes and diagnostics ***
2024-06-19 10:28:38 (28496): Guest Log:     "exeErrorCode": 0,
2024-06-19 10:28:38 (28496): Guest Log:     "exeErrorDiag": "",
2024-06-19 10:28:38 (28496): Guest Log:     "pilotErrorCode": 0,
2024-06-19 10:28:38 (28496): Guest Log:     "pilotErrorDiag": "",
2024-06-19 10:28:38 (28496): Guest Log:  *** Listing of results directory ***
2024-06-19 10:28:38 (28496): Guest Log: total 360024
2024-06-19 10:28:38 (28496): Guest Log: -rw-r--r--. 1 atlas atlas    469443 Jun 12 16:29 pilot3.tar.gz
2024-06-19 10:28:38 (28496): Guest Log: -rwx------. 1 atlas atlas     32308 Jun 12 16:39 runpilot2-wrapper.sh
2024-06-19 10:28:38 (28496): Guest Log: -rw-r--r--. 1 atlas atlas      5654 Jun 12 16:39 queuedata.json
2024-06-19 10:28:38 (28496): Guest Log: -rwxr-xr-x. 1 atlas atlas     17537 Jun 19 05:23 start_atlas.sh
2024-06-19 10:28:38 (28496): Guest Log: -rwxr-xr-x. 1 atlas atlas    482056 Jun 19 05:23 input.tar.gz
2024-06-19 10:28:38 (28496): Guest Log: -rwxr-xr-x. 1 atlas atlas      9115 Jun 19 05:23 init_data.xml
2024-06-19 10:28:38 (28496): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun 19 05:23 EVNT.38776190._000852.pool.root.1 -> /data/./ATLAS.root_0
2024-06-19 10:28:38 (28496): Guest Log: -rw-r--r--. 1 atlas atlas      2653 Jun 19 05:24 pandaJob.out
2024-06-19 10:28:38 (28496): Guest Log: -rw-------. 1 atlas atlas       424 Jun 19 05:25 setup.sh.local
2024-06-19 10:28:38 (28496): Guest Log: -rw-------. 1 atlas atlas   1020814 Jun 19 05:35 agis_schedconf.cvmfs.json
2024-06-19 10:28:38 (28496): Guest Log: -rw-------. 1 atlas atlas   1317943 Jun 19 05:35 cric_ddmendpoints.json
2024-06-19 10:28:38 (28496): Guest Log: drwx------. 4 atlas atlas      4096 Jun 19 05:35 pilot3
2024-06-19 10:28:38 (28496): Guest Log: -rw-------. 1 atlas atlas 362220049 Jun 19 09:27 HITS.38921001._054916.pool.root.1
2024-06-19 10:28:38 (28496): Guest Log: -rw-------. 1 atlas atlas      1030 Jun 19 09:27 memory_monitor_summary.json
2024-06-19 10:28:38 (28496): Guest Log: -rw-------. 1 atlas atlas         0 Jun 19 09:27 agis_ddmendpoints.agis.ALL.json
2024-06-19 10:28:38 (28496): Guest Log: -rw-------. 1 atlas atlas    363410 Jun 19 09:27 log.38921001._054916.job.log.tgz.1
2024-06-19 10:28:38 (28496): Guest Log: -rw-------. 1 atlas atlas        95 Jun 19 09:27 pilot_heartbeat.json
2024-06-19 10:28:38 (28496): Guest Log: -rw-------. 1 atlas atlas      7719 Jun 19 09:28 heartbeat.json
2024-06-19 10:28:38 (28496): Guest Log: -rw-------. 1 atlas atlas      4394 Jun 19 09:28 pilotlog.txt
2024-06-19 10:28:38 (28496): Guest Log: -rw-------. 1 atlas atlas   1130358 Jun 19 09:28 log.38921001._054916.job.log.1
2024-06-19 10:28:38 (28496): Guest Log: -rw-------. 1 atlas atlas       357 Jun 19 09:28 output.list
2024-06-19 10:28:38 (28496): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun 19 09:28 runtime_log
2024-06-19 10:28:38 (28496): Guest Log: -rw-------. 1 atlas atlas   1515520 Jun 19 09:28 result.tar.gz
2024-06-19 10:28:38 (28496): Guest Log: -rw-r--r--. 1 atlas atlas     10925 Jun 19 09:28 runtime_log.err
2024-06-19 10:28:38 (28496): Guest Log: -rw-------. 1 atlas atlas       646 Jun 19 09:28 L8aMDm6Bgb5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmAXcKDmnF7fsn.diag
2024-06-19 10:28:38 (28496): Guest Log: Looking for outputfile HITS.38921001._054916.pool.root.1
2024-06-19 10:28:38 (28496): Guest Log: HITS file was successfully produced
2024-06-19 10:28:38 (28496): Guest Log: -rw-------. 1 atlas atlas 362220049 Jun 19 09:27 /home/atlas/RunAtlas/HITS.38921001._054916.pool.root.1
2024-06-19 10:28:41 (28496): Guest Log: Successfully finished the ATLAS job!
2024-06-19 10:28:41 (28496): Guest Log: Copying the results back to the shared directory!
2024-06-19 10:28:41 (28496): Guest Log:  *** Contents of shared directory: ***
2024-06-19 10:28:41 (28496): Guest Log: total 956688
2024-06-19 10:28:41 (28496): Guest Log: -rwxrwxrwx. 1 root root 615392601 Jun 19 05:22 ATLAS.root_0
2024-06-19 10:28:41 (28496): Guest Log: -rwxrwxrwx. 1 root root 362220049 Jun 19  2024 HITS.pool.root.1
2024-06-19 10:28:41 (28496): Guest Log: -rwxrwxrwx. 1 root root      9115 Jun 19 05:22 init_data.xml
2024-06-19 10:28:41 (28496): Guest Log: -rwxrwxrwx. 1 root root    482056 Jun 12 21:35 input.tar.gz
2024-06-19 10:28:41 (28496): Guest Log: -rwxrwxrwx. 1 root root   1515520 Jun 19  2024 result.tar.gz
2024-06-19 10:28:41 (28496): Guest Log: -rwxrwxrwx. 1 root root     17537 Jun 12 21:35 start_atlas.sh
2024-06-19 10:28:41 (28496): Guest Log:  *** Success! Shutting down the machine. ***
2024-06-19 10:28:41 (28496): VM Completion File Detected.
2024-06-19 10:28:41 (28496): Powering off VM.
2024-06-19 10:28:42 (28496): Successfully stopped VM.
2024-06-19 10:28:42 (28496): Deregistering VM. (boinc_b954fd4511dbaeac, slot#2)
2024-06-19 10:28:42 (28496): Removing network bandwidth throttle group from VM.
2024-06-19 10:28:43 (28496): Removing VM from VirtualBox.
10:28:48 (28496): called boinc_finish(0)

</stderr_txt>
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