Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
23:01:03 (1642822): wrapper (7.7.26015): starting
23:01:03 (1642822): wrapper: running run_atlas (--nthreads 12)
[2024-06-18 23:01:03] Arguments: --nthreads 12
[2024-06-18 23:01:03] Threads: 12
[2024-06-18 23:01:03] Checking for CVMFS
[2024-06-18 23:01:03] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-18 23:01:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-18 23:01:03] Running cvmfs_config stat atlas.cern.ch
[2024-06-18 23:01:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-18 23:01:04] 2.11.2.0 281999 505 52408 134035 0 17 3471965 4194305 940 130560 0 526744 98.752 620136 9746 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.150.1:3128 1
[2024-06-18 23:01:04] CVMFS is ok
[2024-06-18 23:01:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-18 23:01:04] Checking for apptainer binary...
[2024-06-18 23:01:04] apptainer is not installed, using version from CVMFS
[2024-06-18 23:01:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-18 23:01:04] Trebeth
[2024-06-18 23:01:04] apptainer works
[2024-06-18 23:01:04] Set ATHENA_PROC_NUMBER=12
[2024-06-18 23:01:04] Set ATHENA_CORE_NUMBER=12
[2024-06-18 23:01:04] Starting ATLAS job with PandaID=6228201985
[2024-06-18 23:01:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/44 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-19 02:56:50]  *** The last 200 lines of the pilot log: ***
[2024-06-19 02:56:50] 2024-06-19 06:56:30,833 | INFO     | model: linear, x: [1718766113.0, 1718766174.0, 1718766235.0, 1718766296.0, 1718766357.0, 1718766418.0, 1718766479.0, 1718766540.0, 1718766601.0, 1718766662.0, 1718
[2024-06-19 02:56:50] 2024-06-19 06:56:30,833 | INFO     | sum of square deviations: 3822136780.0
[2024-06-19 02:56:50] 2024-06-19 06:56:30,835 | INFO     | sum of deviations: 91035156637.00002
[2024-06-19 02:56:50] 2024-06-19 06:56:30,835 | INFO     | mean x: 1718773128.0
[2024-06-19 02:56:50] 2024-06-19 06:56:30,835 | INFO     | mean y: 2717334.948051948
[2024-06-19 02:56:50] 2024-06-19 06:56:30,835 | INFO     | -- intersect: -40934797447.279724
[2024-06-19 02:56:50] 2024-06-19 06:56:30,835 | INFO     | intersect: -40934797447.279724
[2024-06-19 02:56:50] 2024-06-19 06:56:30,836 | INFO     | chi2: 3.511446105582832
[2024-06-19 02:56:50] 2024-06-19 06:56:30,836 | INFO     | model: linear, x: [1718766113.0, 1718766174.0, 1718766235.0, 1718766296.0, 1718766357.0, 1718766418.0, 1718766479.0, 1718766540.0, 1718766601.0, 1718766662.0, 1718
[2024-06-19 02:56:50] 2024-06-19 06:56:30,836 | INFO     | sum of square deviations: 3579276412.5
[2024-06-19 02:56:50] 2024-06-19 06:56:30,837 | INFO     | sum of deviations: 105901927949.49998
[2024-06-19 02:56:50] 2024-06-19 06:56:30,837 | INFO     | mean x: 1718772975.5
[2024-06-19 02:56:50] 2024-06-19 06:56:30,837 | INFO     | mean y: 2726477.4911504425
[2024-06-19 02:56:50] 2024-06-19 06:56:30,838 | INFO     | -- intersect: -50851510758.07712
[2024-06-19 02:56:50] 2024-06-19 06:56:30,838 | INFO     | intersect: -50851510758.07712
[2024-06-19 02:56:50] 2024-06-19 06:56:30,838 | INFO     | chi2: 2.7088575913356916
[2024-06-19 02:56:50] 2024-06-19 06:56:30,838 | INFO     | current chi2=2.7088575913356916 (change=22.8563529131519 %)
[2024-06-19 02:56:50] 2024-06-19 06:56:30,838 | INFO     | right removable region: 225
[2024-06-19 02:56:50] 2024-06-19 06:56:30,838 | INFO     | model: linear, x: [1718766418.0, 1718766479.0, 1718766540.0, 1718766601.0, 1718766662.0, 1718766723.0, 1718766784.0, 1718766845.0, 1718766906.0, 1718766967.0, 1718
[2024-06-19 02:56:50] 2024-06-19 06:56:30,839 | INFO     | sum of square deviations: 3579276412.5
[2024-06-19 02:56:50] 2024-06-19 06:56:30,840 | INFO     | sum of deviations: 30826162059.0
[2024-06-19 02:56:50] 2024-06-19 06:56:30,840 | INFO     | mean x: 1718773280.5
[2024-06-19 02:56:50] 2024-06-19 06:56:30,840 | INFO     | mean y: 2755038.371681416
[2024-06-19 02:56:50] 2024-06-19 06:56:30,840 | INFO     | -- intersect: -14800008867.298615
[2024-06-19 02:56:50] 2024-06-19 06:56:30,840 | INFO     | intersect: -14800008867.298615
[2024-06-19 02:56:50] 2024-06-19 06:56:30,841 | INFO     | chi2: 1.3369607617521932
[2024-06-19 02:56:50] 2024-06-19 06:56:30,841 | INFO     | current chi2=1.3369607617521932 (change=61.92563628908997 %)
[2024-06-19 02:56:50] 2024-06-19 06:56:30,841 | INFO     | model: linear, x: [1718766723.0, 1718766784.0, 1718766845.0, 1718766906.0, 1718766967.0, 1718767028.0, 1718767089.0, 1718767150.0, 1718767211.0, 1718767272.0, 1718
[2024-06-19 02:56:50] 2024-06-19 06:56:30,841 | INFO     | sum of square deviations: 3346927870.0
[2024-06-19 02:56:50] 2024-06-19 06:56:30,842 | INFO     | sum of deviations: 6407420053.000008
[2024-06-19 02:56:50] 2024-06-19 06:56:30,842 | INFO     | mean x: 1718773433.0
[2024-06-19 02:56:50] 2024-06-19 06:56:30,843 | INFO     | mean y: 2770935.561085973
[2024-06-19 02:56:50] 2024-06-19 06:56:30,843 | INFO     | -- intersect: -3287680424.2908564
[2024-06-19 02:56:50] 2024-06-19 06:56:30,843 | INFO     | intersect: -3287680424.2908564
[2024-06-19 02:56:50] 2024-06-19 06:56:30,843 | INFO     | chi2: 0.8740354070273783
[2024-06-19 02:56:50] 2024-06-19 06:56:30,843 | INFO     | current chi2=0.8740354070273783 (change=34.625201275025795 %)
[2024-06-19 02:56:50] 2024-06-19 06:56:30,843 | INFO     | model: linear, x: [1718767028.0, 1718767089.0, 1718767150.0, 1718767211.0, 1718767272.0, 1718767333.0, 1718767394.0, 1718767455.0, 1718767516.0, 1718767577.0, 1718
[2024-06-19 02:56:50] 2024-06-19 06:56:30,844 | INFO     | sum of square deviations: 3124858590.0
[2024-06-19 02:56:50] 2024-06-19 06:56:30,845 | INFO     | sum of deviations: -344967413.5000019
[2024-06-19 02:56:50] 2024-06-19 06:56:30,845 | INFO     | mean x: 1718773585.5
[2024-06-19 02:56:50] 2024-06-19 06:56:30,845 | INFO     | mean y: 2775572.837962963
[2024-06-19 02:56:50] 2024-06-19 06:56:30,845 | INFO     | -- intersect: 192518839.96675146
[2024-06-19 02:56:50] 2024-06-19 06:56:30,845 | INFO     | intersect: 192518839.96675146
[2024-06-19 02:56:50] 2024-06-19 06:56:30,845 | INFO     | chi2: 0.8535897896966285
[2024-06-19 02:56:50] 2024-06-19 06:56:30,846 | INFO     | current chi2=0.8535897896966285 (change=2.3392207187905547 %)
[2024-06-19 02:56:50] 2024-06-19 06:56:30,846 | INFO     | left removable region: 30
[2024-06-19 02:56:50] 2024-06-19 06:56:30,846 | INFO     | model: linear, x: [1718767943.0, 1718768004.0, 1718768065.0, 1718768126.0, 1718768187.0, 1718768248.0, 1718768309.0, 1718768370.0, 1718768431.0, 1718768492.0, 1718
[2024-06-19 02:56:50] 2024-06-19 06:56:30,846 | INFO     | sum of square deviations: 2299168690.0
[2024-06-19 02:56:50] 2024-06-19 06:56:30,847 | INFO     | sum of deviations: 7832381029.000001
[2024-06-19 02:56:50] 2024-06-19 06:56:30,847 | INFO     | mean x: 1718773860.0
[2024-06-19 02:56:50] 2024-06-19 06:56:30,847 | INFO     | mean y: 2792649.8974358975
[2024-06-19 02:56:50] 2024-06-19 06:56:30,847 | INFO     | -- intersect: -5852407028.472012
[2024-06-19 02:56:50] 2024-06-19 06:56:30,847 | INFO     | intersect: -5852407028.472012
[2024-06-19 02:56:50] 2024-06-19 06:56:30,848 | INFO     | chi2: 0.00426004597815151
[2024-06-19 02:56:50] 2024-06-19 06:56:30,848 | INFO     | -- intersect: -5852407028.472012
[2024-06-19 02:56:50] 2024-06-19 06:56:30,848 | INFO     | current memory leak: 3.41 B/s (using 195 data points, chi2=0.00)
[2024-06-19 02:56:50] 2024-06-19 06:56:30,849 | INFO     | ..............................
[2024-06-19 02:56:50] 2024-06-19 06:56:30,849 | INFO     | . Timing measurements:
[2024-06-19 02:56:50] 2024-06-19 06:56:30,849 | INFO     | . get job = 0 s
[2024-06-19 02:56:50] 2024-06-19 06:56:30,849 | INFO     | . initial setup = 2 s
[2024-06-19 02:56:50] 2024-06-19 06:56:30,849 | INFO     | . payload setup = 7 s
[2024-06-19 02:56:50] 2024-06-19 06:56:30,849 | INFO     | . stage-in = 0 s
[2024-06-19 02:56:50] 2024-06-19 06:56:30,849 | INFO     | . payload execution = 14071 s
[2024-06-19 02:56:50] 2024-06-19 06:56:30,849 | INFO     | . stage-out = 1 s
[2024-06-19 02:56:50] 2024-06-19 06:56:30,849 | INFO     | . log creation = 0 s
[2024-06-19 02:56:50] 2024-06-19 06:56:30,849 | INFO     | ..............................
[2024-06-19 02:56:50] 2024-06-19 06:56:30,936 | INFO     | 
[2024-06-19 02:56:50] 2024-06-19 06:56:30,941 | INFO     | job summary report
[2024-06-19 02:56:50] 2024-06-19 06:56:30,941 | INFO     | --------------------------------------------------
[2024-06-19 02:56:50] 2024-06-19 06:56:30,941 | INFO     | PanDA job id: 6228201985
[2024-06-19 02:56:50] 2024-06-19 06:56:30,942 | INFO     | task id: 38921007
[2024-06-19 02:56:50] 2024-06-19 06:56:30,942 | INFO     | errors: (none)
[2024-06-19 02:56:50] 2024-06-19 06:56:30,942 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-19 02:56:50] 2024-06-19 06:56:30,942 | INFO     | pilot state: finished 
[2024-06-19 02:56:50] 2024-06-19 06:56:30,942 | INFO     | transexitcode: 0
[2024-06-19 02:56:50] 2024-06-19 06:56:30,942 | INFO     | exeerrorcode: 0
[2024-06-19 02:56:50] 2024-06-19 06:56:30,942 | INFO     | exeerrordiag: 
[2024-06-19 02:56:50] 2024-06-19 06:56:30,942 | INFO     | exitcode: 0
[2024-06-19 02:56:50] 2024-06-19 06:56:30,942 | INFO     | exitmsg: OK
[2024-06-19 02:56:50] 2024-06-19 06:56:30,942 | INFO     | cpuconsumptiontime: 148092 s
[2024-06-19 02:56:50] 2024-06-19 06:56:30,942 | INFO     | nevents: 400
[2024-06-19 02:56:50] 2024-06-19 06:56:30,943 | INFO     | neventsw: 0
[2024-06-19 02:56:50] 2024-06-19 06:56:30,943 | INFO     | pid: 1655760
[2024-06-19 02:56:50] 2024-06-19 06:56:30,943 | INFO     | pgrp: 1655760
[2024-06-19 02:56:50] 2024-06-19 06:56:30,943 | INFO     | corecount: 12
[2024-06-19 02:56:50] 2024-06-19 06:56:30,943 | INFO     | event service: False
[2024-06-19 02:56:50] 2024-06-19 06:56:30,943 | INFO     | sizes: {0: 2380327, 1: 2381262, 7: 2381468, 12: 2381496, 14081: 2412064, 14082: 2412063, 14085: 2421279, 14090: 2421393}
[2024-06-19 02:56:50] 2024-06-19 06:56:30,943 | INFO     | --------------------------------------------------
[2024-06-19 02:56:50] 2024-06-19 06:56:30,943 | INFO     | 
[2024-06-19 02:56:50] 2024-06-19 06:56:30,943 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/44
[2024-06-19 02:56:50] 2024-06-19 06:56:30,949 | WARNING  | process 1655760 is no longer using CPU - aborting
[2024-06-19 02:56:50] 2024-06-19 06:56:30,950 | INFO     | aborting job monitoring since job object (job id=6228201985) has expired
[2024-06-19 02:56:50] 2024-06-19 06:56:30,959 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-19 02:56:50] 2024-06-19 06:56:30,959 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-19 02:56:50] 2024-06-19 06:56:30,959 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-19 02:56:50] 2024-06-19 06:56:30,959 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-19 02:56:50] 2024-06-19 06:56:30,959 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-19 02:56:50] 2024-06-19 06:56:30,959 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-19 02:56:50] 2024-06-19 06:56:30,959 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-19 02:56:50] 2024-06-19 06:56:30,960 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-19 02:56:50] 2024-06-19 06:56:30,960 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-19 02:56:50] 2024-06-19 06:56:30,960 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-19 02:56:50] 2024-06-19 06:56:30,960 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-19 02:56:50] 2024-06-19 06:56:30,960 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-19 02:56:50] 2024-06-19 06:56:30,960 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-19 02:56:50] 2024-06-19 06:56:30,960 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-19 02:56:50] 2024-06-19 06:56:30,960 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-19 02:56:50] 2024-06-19 06:56:30,960 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-19 02:56:50] 2024-06-19 06:56:30,960 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-19 02:56:50] 2024-06-19 06:56:30,960 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-19 02:56:50] 2024-06-19 06:56:30,961 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-19 02:56:50] 2024-06-19 06:56:30,961 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-19 02:56:50] 2024-06-19 06:56:30,961 | INFO     | job 6228201985 has completed (purged errors)
[2024-06-19 02:56:50] 2024-06-19 06:56:30,961 | INFO     | overall cleanup function is called
[2024-06-19 02:56:50] 2024-06-19 06:56:31,199 | INFO     | 14109s have passed since pilot start
[2024-06-19 02:56:50] 2024-06-19 06:56:31,967 | INFO     | --- collectZombieJob: --- 10, [1655760]
[2024-06-19 02:56:50] 2024-06-19 06:56:31,967 | INFO     | zombie collector waiting for pid 1655760
[2024-06-19 02:56:50] 2024-06-19 06:56:31,968 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-19 02:56:50] 2024-06-19 06:56:32,970 | INFO     | collected zombie processes
[2024-06-19 02:56:50] 2024-06-19 06:56:32,971 | INFO     | will now attempt to kill all subprocesses of pid=1655760
[2024-06-19 02:56:50] 2024-06-19 06:56:33,079 | INFO     | process IDs to be killed: [1655760] (in reverse order)
[2024-06-19 02:56:50] 2024-06-19 06:56:33,176 | WARNING  | found no corresponding commands to process id(s)
[2024-06-19 02:56:50] 2024-06-19 06:56:33,177 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-19 02:56:50] 2024-06-19 06:56:33,185 | INFO     | did not find any defunct processes belonging to 1655760
[2024-06-19 02:56:50] 2024-06-19 06:56:33,191 | INFO     | did not find any defunct processes belonging to 1655760
[2024-06-19 02:56:50] 2024-06-19 06:56:33,192 | INFO     | ready for new job
[2024-06-19 02:56:50] 2024-06-19 06:56:33,192 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-19 02:56:50] 2024-06-19 06:56:33,194 | INFO     | *************************************
[2024-06-19 02:56:50] 2024-06-19 06:56:33,194 | INFO     | ***  PanDA Pilot version 3.7.6.8  ***
[2024-06-19 02:56:50] 2024-06-19 06:56:33,194 | INFO     | *************************************
[2024-06-19 02:56:50] 2024-06-19 06:56:33,194 | INFO     | 
[2024-06-19 02:56:50] 2024-06-19 06:56:33,217 | INFO     | architecture information:
[2024-06-19 02:56:50] 2024-06-19 06:56:33,218 | INFO     | executing command: cat /etc/os-release
[2024-06-19 02:56:50] 2024-06-19 06:56:33,229 | INFO     | cat /etc/os-release:
[2024-06-19 02:56:50] NAME="CentOS Linux"
[2024-06-19 02:56:50] VERSION="7 (Core)"
[2024-06-19 02:56:50] ID="centos"
[2024-06-19 02:56:50] ID_LIKE="rhel fedora"
[2024-06-19 02:56:50] VERSION_ID="7"
[2024-06-19 02:56:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-19 02:56:50] ANSI_COLOR="0;31"
[2024-06-19 02:56:50] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-19 02:56:50] HOME_URL="https://www.centos.org/"
[2024-06-19 02:56:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-19 02:56:50] 
[2024-06-19 02:56:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-19 02:56:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-19 02:56:50] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-19 02:56:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-19 02:56:50] 
[2024-06-19 02:56:50] 2024-06-19 06:56:33,229 | INFO     | *************************************
[2024-06-19 02:56:50] 2024-06-19 06:56:33,731 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/44
[2024-06-19 02:56:50] 2024-06-19 06:56:33,746 | INFO     | sufficient remaining disk space (387211853824 B)
[2024-06-19 02:56:50] 2024-06-19 06:56:33,746 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-19 02:56:50] 2024-06-19 06:56:33,746 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-19 02:56:50] 2024-06-19 06:56:33,746 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-19 02:56:50] 2024-06-19 06:56:34,184 | INFO     | all data control threads have been joined
[2024-06-19 02:56:50] 2024-06-19 06:56:34,208 | INFO     | found 0 job(s) in 20 queues
[2024-06-19 02:56:50] 2024-06-19 06:56:34,208 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-19 02:56:50] 2024-06-19 06:56:34,208 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-19 02:56:50] 2024-06-19 06:56:34,218 | INFO     | all job control threads have been joined
[2024-06-19 02:56:50] 2024-06-19 06:56:34,454 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-19 02:56:50] 2024-06-19 06:56:34,455 | INFO     | aborting loop
[2024-06-19 02:56:50] 2024-06-19 06:56:34,752 | INFO     | [job] retrieve thread has finished
[2024-06-19 02:56:50] 2024-06-19 06:56:34,902 | INFO     | [payload] validate_pre thread has finished
[2024-06-19 02:56:50] 2024-06-19 06:56:34,995 | INFO     | [job] validate thread has finished
[2024-06-19 02:56:50] 2024-06-19 06:56:35,095 | INFO     | [data] copytool_in thread has finished
[2024-06-19 02:56:50] 2024-06-19 06:56:35,095 | INFO     | [payload] execute_payloads thread has finished
[2024-06-19 02:56:50] 2024-06-19 06:56:35,186 | INFO     | [data] control thread has finished
[2024-06-19 02:56:50] 2024-06-19 06:56:35,198 | INFO     | all payload control threads have been joined
[2024-06-19 02:56:50] 2024-06-19 06:56:35,222 | INFO     | [job] control thread has finished
[2024-06-19 02:56:50] 2024-06-19 06:56:35,447 | INFO     | [job] create_data_payload thread has finished
[2024-06-19 02:56:50] 2024-06-19 06:56:35,458 | INFO     | [job] job monitor thread has finished
[2024-06-19 02:56:50] 2024-06-19 06:56:35,690 | INFO     | [payload] failed_post thread has finished
[2024-06-19 02:56:50] 2024-06-19 06:56:35,750 | INFO     | [data] copytool_out thread has finished
[2024-06-19 02:56:50] 2024-06-19 06:56:35,944 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-19 02:56:50] 2024-06-19 06:56:36,002 | INFO     | [payload] validate_post thread has finished
[2024-06-19 02:56:50] 2024-06-19 06:56:36,204 | INFO     | [payload] control thread has finished
[2024-06-19 02:56:50] 2024-06-19 06:56:36,216 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-19 02:56:50] 2024-06-19 06:56:36,946 | INFO     | [job] queue monitor thread has finished
[2024-06-19 02:56:50] 2024-06-19 06:56:40,218 | INFO     | [data] queue_monitor thread has finished
[2024-06-19 02:56:50] 2024-06-19 06:56:44,214 | INFO     | job.realtimelogging is not enabled
[2024-06-19 02:56:50] 2024-06-19 06:56:45,218 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-19 02:56:50] 2024-06-19 06:56:45,372 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140650195535680)>', '<ExcThread(monitor, started 140649990448896)>']
[2024-06-19 02:56:50] 2024-06-19 06:56:46,254 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-19 02:56:50] 2024-06-19 06:56:46,255 | INFO     | [monitor] control thread has ended
[2024-06-19 02:56:50] 2024-06-19 06:56:50,394 | INFO     | all workflow threads have been joined
[2024-06-19 02:56:50] 2024-06-19 06:56:50,395 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-19 02:56:50] 2024-06-19 06:56:50,395 | INFO     | traces error code: 0
[2024-06-19 02:56:50] 2024-06-19 06:56:50,395 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-19 02:56:50] 2024-06-19 06:56:50,473 [wrapper] ==== pilot stdout END ====
[2024-06-19 02:56:50] 2024-06-19 06:56:50,475 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-19 02:56:50] 2024-06-19 06:56:50,477 [wrapper] pilotpid: 1648006
[2024-06-19 02:56:50] 2024-06-19 06:56:50,479 [wrapper] Pilot exit status: 0
[2024-06-19 02:56:50] 2024-06-19 06:56:50,486 [wrapper] pandaids: 6228201985
[2024-06-19 02:56:50] 2024-06-19 06:56:50,536 [wrapper] cleanup supervisor_pilot 2165650 1648007
[2024-06-19 02:56:50] 2024-06-19 06:56:50,538 [wrapper] Test setup, not cleaning
[2024-06-19 02:56:50] 2024-06-19 06:56:50,543 [wrapper] ==== wrapper stdout END ====
[2024-06-19 02:56:50] 2024-06-19 06:56:50,545 [wrapper] ==== wrapper stderr END ====
[2024-06-19 02:56:50] 2024-06-19 06:56:50,548 [wrapper] apfmon messages muted
[2024-06-19 02:56:50]  *** Error codes and diagnostics ***
[2024-06-19 02:56:50]     "exeErrorCode": 0,
[2024-06-19 02:56:50]     "exeErrorDiag": "",
[2024-06-19 02:56:50]     "pilotErrorCode": 0,
[2024-06-19 02:56:50]     "pilotErrorDiag": "",
[2024-06-19 02:56:50]  *** Listing of results directory ***
[2024-06-19 02:56:50] total 922320
[2024-06-19 02:56:50] -rw-r--r-- 1 boinc boinc    469443 Jun 11 20:33 pilot3.tar.gz
[2024-06-19 02:56:50] -rwx------ 1 boinc boinc     32308 Jun 11 21:12 runpilot2-wrapper.sh
[2024-06-19 02:56:50] -rw-r--r-- 1 boinc boinc      5654 Jun 11 21:12 queuedata.json
[2024-06-19 02:56:50] -rw-r--r-- 1 boinc boinc       100 Jun 18 23:01 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-19 02:56:50] -rwxr-xr-x 1 boinc boinc      7986 Jun 18 23:01 run_atlas
[2024-06-19 02:56:50] -rw-r--r-- 1 boinc boinc       105 Jun 18 23:01 job.xml
[2024-06-19 02:56:50] -rw-r--r-- 2 boinc boinc 586387088 Jun 18 23:01 EVNT.38776201._000921.pool.root.1
[2024-06-19 02:56:50] -rw-r--r-- 2 boinc boinc     17537 Jun 18 23:01 start_atlas.sh
[2024-06-19 02:56:50] drwxrwx--x 2 boinc boinc      4096 Jun 18 23:01 shared
[2024-06-19 02:56:50] -rw-r--r-- 2 boinc boinc    482046 Jun 18 23:01 input.tar.gz
[2024-06-19 02:56:50] -rw-r--r-- 1 boinc boinc      7599 Jun 18 23:01 init_data.xml
[2024-06-19 02:56:50] -rw-r--r-- 1 boinc boinc         0 Jun 18 23:01 boinc_lockfile
[2024-06-19 02:56:50] -rw-r--r-- 1 boinc boinc      2631 Jun 18 23:01 pandaJob.out
[2024-06-19 02:56:50] -rw------- 1 boinc boinc       460 Jun 18 23:01 setup.sh.local
[2024-06-19 02:56:50] -rw------- 1 boinc boinc   1023127 Jun 18 23:01 agis_schedconf.cvmfs.json
[2024-06-19 02:56:50] -rw------- 1 boinc boinc   1317943 Jun 18 23:01 cric_ddmendpoints.json
[2024-06-19 02:56:50] drwx------ 4 boinc boinc      4096 Jun 18 23:01 pilot3
[2024-06-19 02:56:50] -rw-r--r-- 1 boinc boinc       532 Jun 19 02:55 boinc_task_state.xml
[2024-06-19 02:56:50] -rw------- 1 boinc boinc 350688880 Jun 19 02:55 HITS.38921007._035714.pool.root.1
[2024-06-19 02:56:50] -rw------- 1 boinc boinc      1026 Jun 19 02:56 memory_monitor_summary.json
[2024-06-19 02:56:50] -rw------- 1 boinc boinc         0 Jun 19 02:56 agis_ddmendpoints.agis.ALL.json
[2024-06-19 02:56:50] -rw------- 1 boinc boinc    453112 Jun 19 02:56 log.38921007._035714.job.log.tgz.1
[2024-06-19 02:56:50] -rw------- 1 boinc boinc        95 Jun 19 02:56 pilot_heartbeat.json
[2024-06-19 02:56:50] -rw------- 1 boinc boinc      7692 Jun 19 02:56 heartbeat.json
[2024-06-19 02:56:50] -rw-r--r-- 1 boinc boinc      8192 Jun 19 02:56 boinc_mmap_file
[2024-06-19 02:56:50] -rw-r--r-- 1 boinc boinc        29 Jun 19 02:56 wrapper_checkpoint.txt
[2024-06-19 02:56:50] -rw------- 1 boinc boinc      4292 Jun 19 02:56 pilotlog.txt
[2024-06-19 02:56:50] -rw------- 1 boinc boinc   1472870 Jun 19 02:56 log.38921007._035714.job.log.1
[2024-06-19 02:56:50] -rw------- 1 boinc boinc       357 Jun 19 02:56 output.list
[2024-06-19 02:56:50] -rw-r--r-- 1 boinc boinc       620 Jun 19 02:56 runtime_log
[2024-06-19 02:56:50] -rw------- 1 boinc boinc   1945600 Jun 19 02:56 result.tar.gz
[2024-06-19 02:56:50] -rw-r--r-- 1 boinc boinc     11478 Jun 19 02:56 runtime_log.err
[2024-06-19 02:56:50] -rw------- 1 boinc boinc       645 Jun 19 02:56 FCsKDmCiRb5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmCYbKDmfEU4Pn.diag
[2024-06-19 02:56:50] -rw-r--r-- 1 boinc boinc     21290 Jun 19 02:56 stderr.txt
[2024-06-19 02:56:50] HITS file was successfully produced:
[2024-06-19 02:56:50] -rw------- 1 boinc boinc 350688880 Jun 19 02:55 shared/HITS.pool.root.1
[2024-06-19 02:56:50]  *** Contents of shared directory: ***
[2024-06-19 02:56:50] total 917516
[2024-06-19 02:56:50] -rw-r--r-- 2 boinc boinc 586387088 Jun 18 23:01 ATLAS.root_0
[2024-06-19 02:56:50] -rw-r--r-- 2 boinc boinc     17537 Jun 18 23:01 start_atlas.sh
[2024-06-19 02:56:50] -rw-r--r-- 2 boinc boinc    482046 Jun 18 23:01 input.tar.gz
[2024-06-19 02:56:50] -rw------- 1 boinc boinc 350688880 Jun 19 02:55 HITS.pool.root.1
[2024-06-19 02:56:50] -rw------- 1 boinc boinc   1945600 Jun 19 02:56 result.tar.gz
02:56:52 (1642822): run_atlas exited; CPU time 147821.777092
02:56:52 (1642822): called boinc_finish(0)

</stderr_txt>
]]>

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