Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
14:36:00 (281830): wrapper (7.7.26015): starting
14:36:00 (281830): wrapper: running run_atlas (--nthreads 12)
[2024-06-18 14:36:00] Arguments: --nthreads 12
[2024-06-18 14:36:00] Threads: 12
[2024-06-18 14:36:00] Checking for CVMFS
[2024-06-18 14:36:02] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-18 14:36:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-18 14:36:04] Running cvmfs_config stat atlas.cern.ch
[2024-06-18 14:36:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-18 14:36:04] 2.11.2.0 281999 0 25312 134024 3 1 3578860 4194304 0 130560 0 0 0.000 1141 1317 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.150.1:3128 1
[2024-06-18 14:36:04] CVMFS is ok
[2024-06-18 14:36:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-18 14:36:04] Checking for apptainer binary...
[2024-06-18 14:36:04] apptainer is not installed, using version from CVMFS
[2024-06-18 14:36:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-18 14:36:05] Trebeth
[2024-06-18 14:36:05] apptainer works
[2024-06-18 14:36:05] Set ATHENA_PROC_NUMBER=12
[2024-06-18 14:36:05] Set ATHENA_CORE_NUMBER=12
[2024-06-18 14:36:05] Starting ATLAS job with PandaID=6228014410
[2024-06-18 14:36:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/23 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-18 19:58:14]  *** The last 200 lines of the pilot log: ***
[2024-06-18 19:58:14] 2024-06-18 23:58:00,374 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-18 19:58:14] 2024-06-18 23:58:00,374 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-18 19:58:14] 2024-06-18 23:58:00,379 | INFO     | fitting pss+swap vs Time
[2024-06-18 19:58:14] 2024-06-18 23:58:00,380 | INFO     | model: linear, x: [1718735849.0, 1718735910.0, 1718735971.0, 1718736032.0, 1718736093.0, 1718736154.0, 1718736215.0, 1718736276.0, 1718736337.0, 1718736398.0, 1718
[2024-06-18 19:58:14] 2024-06-18 23:58:00,380 | INFO     | sum of square deviations: 9784425315.0
[2024-06-18 19:58:14] 2024-06-18 23:58:00,382 | INFO     | sum of deviations: 34206174590.49999
[2024-06-18 19:58:14] 2024-06-18 23:58:00,382 | INFO     | mean x: 1718745456.5
[2024-06-18 19:58:14] 2024-06-18 23:58:00,382 | INFO     | mean y: 2743418.161392405
[2024-06-18 19:58:14] 2024-06-18 23:58:00,383 | INFO     | -- intersect: -6005959726.778255
[2024-06-18 19:58:14] 2024-06-18 23:58:00,383 | INFO     | intersect: -6005959726.778255
[2024-06-18 19:58:14] 2024-06-18 23:58:00,383 | INFO     | chi2: 3.9564559443589964
[2024-06-18 19:58:14] 2024-06-18 23:58:00,384 | INFO     | model: linear, x: [1718735849.0, 1718735910.0, 1718735971.0, 1718736032.0, 1718736093.0, 1718736154.0, 1718736215.0, 1718736276.0, 1718736337.0, 1718736398.0, 1718
[2024-06-18 19:58:14] 2024-06-18 23:58:00,384 | INFO     | sum of square deviations: 9327281860.0
[2024-06-18 19:58:14] 2024-06-18 23:58:00,386 | INFO     | sum of deviations: 55569019025.000015
[2024-06-18 19:58:14] 2024-06-18 23:58:00,386 | INFO     | mean x: 1718745304.0
[2024-06-18 19:58:14] 2024-06-18 23:58:00,386 | INFO     | mean y: 2750450.0225080387
[2024-06-18 19:58:14] 2024-06-18 23:58:00,386 | INFO     | -- intersect: -10236994840.263533
[2024-06-18 19:58:14] 2024-06-18 23:58:00,386 | INFO     | intersect: -10236994840.263533
[2024-06-18 19:58:14] 2024-06-18 23:58:00,387 | INFO     | chi2: 3.269422329228706
[2024-06-18 19:58:14] 2024-06-18 23:58:00,387 | INFO     | current chi2=3.269422329228706 (change=17.364874645194607 %)
[2024-06-18 19:58:14] 2024-06-18 23:58:00,387 | INFO     | right removable region: 310
[2024-06-18 19:58:14] 2024-06-18 23:58:00,387 | INFO     | model: linear, x: [1718736154.0, 1718736215.0, 1718736276.0, 1718736337.0, 1718736398.0, 1718736459.0, 1718736520.0, 1718736581.0, 1718736642.0, 1718736703.0, 1718
[2024-06-18 19:58:14] 2024-06-18 23:58:00,388 | INFO     | sum of square deviations: 9327281860.0
[2024-06-18 19:58:14] 2024-06-18 23:58:00,390 | INFO     | sum of deviations: -49888233594.999985
[2024-06-18 19:58:14] 2024-06-18 23:58:00,390 | INFO     | mean x: 1718745609.0
[2024-06-18 19:58:14] 2024-06-18 23:58:00,390 | INFO     | mean y: 2771413.2154340837
[2024-06-18 19:58:14] 2024-06-18 23:58:00,390 | INFO     | -- intersect: 9195715694.216557
[2024-06-18 19:58:14] 2024-06-18 23:58:00,390 | INFO     | intersect: 9195715694.216557
[2024-06-18 19:58:14] 2024-06-18 23:58:00,390 | INFO     | chi2: 1.6278253738134416
[2024-06-18 19:58:14] 2024-06-18 23:58:00,390 | INFO     | current chi2=1.6278253738134416 (change=58.85647668756809 %)
[2024-06-18 19:58:14] 2024-06-18 23:58:00,391 | INFO     | model: linear, x: [1718736459.0, 1718736520.0, 1718736581.0, 1718736642.0, 1718736703.0, 1718736764.0, 1718736825.0, 1718736886.0, 1718736947.0, 1718737008.0, 1718
[2024-06-18 19:58:14] 2024-06-18 23:58:00,391 | INFO     | sum of square deviations: 8884603792.5
[2024-06-18 19:58:14] 2024-06-18 23:58:00,393 | INFO     | sum of deviations: -85469100495.0
[2024-06-18 19:58:14] 2024-06-18 23:58:00,393 | INFO     | mean x: 1718745761.5
[2024-06-18 19:58:14] 2024-06-18 23:58:00,393 | INFO     | mean y: 2783602.470588235
[2024-06-18 19:58:14] 2024-06-18 23:58:00,393 | INFO     | -- intersect: 16536965389.958418
[2024-06-18 19:58:14] 2024-06-18 23:58:00,393 | INFO     | intersect: 16536965389.958418
[2024-06-18 19:58:14] 2024-06-18 23:58:00,394 | INFO     | chi2: 1.0600628257647526
[2024-06-18 19:58:14] 2024-06-18 23:58:00,394 | INFO     | current chi2=1.0600628257647526 (change=34.878590614336865 %)
[2024-06-18 19:58:14] 2024-06-18 23:58:00,394 | INFO     | model: linear, x: [1718736764.0, 1718736825.0, 1718736886.0, 1718736947.0, 1718737008.0, 1718737069.0, 1718737130.0, 1718737191.0, 1718737252.0, 1718737313.0, 1718
[2024-06-18 19:58:14] 2024-06-18 23:58:00,394 | INFO     | sum of square deviations: 8456158550.0
[2024-06-18 19:58:14] 2024-06-18 23:58:00,396 | INFO     | sum of deviations: -89875380838.99998
[2024-06-18 19:58:14] 2024-06-18 23:58:00,396 | INFO     | mean x: 1718745914.0
[2024-06-18 19:58:14] 2024-06-18 23:58:00,397 | INFO     | mean y: 2785150.3588039866
[2024-06-18 19:58:14] 2024-06-18 23:58:00,397 | INFO     | -- intersect: 18270293105.992523
[2024-06-18 19:58:14] 2024-06-18 23:58:00,397 | INFO     | intersect: 18270293105.992523
[2024-06-18 19:58:14] 2024-06-18 23:58:00,397 | INFO     | chi2: 1.0190210144559226
[2024-06-18 19:58:14] 2024-06-18 23:58:00,397 | INFO     | current chi2=1.0190210144559226 (change=3.871639520914389 %)
[2024-06-18 19:58:14] 2024-06-18 23:58:00,397 | INFO     | left removable region: 30
[2024-06-18 19:58:14] 2024-06-18 23:58:00,398 | INFO     | model: linear, x: [1718737679.0, 1718737740.0, 1718737801.0, 1718737862.0, 1718737923.0, 1718737984.0, 1718738045.0, 1718738106.0, 1718738167.0, 1718738228.0, 1718
[2024-06-18 19:58:14] 2024-06-18 23:58:00,398 | INFO     | sum of square deviations: 6806862510.0
[2024-06-18 19:58:14] 2024-06-18 23:58:00,400 | INFO     | sum of deviations: -23127281268.5
[2024-06-18 19:58:14] 2024-06-18 23:58:00,400 | INFO     | mean x: 1718746188.5
[2024-06-18 19:58:14] 2024-06-18 23:58:00,400 | INFO     | mean y: 2775675.775
[2024-06-18 19:58:14] 2024-06-18 23:58:00,400 | INFO     | -- intersect: 5842459740.526562
[2024-06-18 19:58:14] 2024-06-18 23:58:00,400 | INFO     | intersect: 5842459740.526562
[2024-06-18 19:58:14] 2024-06-18 23:58:00,400 | INFO     | chi2: 0.15804557633382327
[2024-06-18 19:58:14] 2024-06-18 23:58:00,401 | INFO     | -- intersect: 5842459740.526562
[2024-06-18 19:58:14] 2024-06-18 23:58:00,401 | INFO     | current memory leak: -3.40 B/s (using 280 data points, chi2=0.16)
[2024-06-18 19:58:14] 2024-06-18 23:58:00,401 | INFO     | ..............................
[2024-06-18 19:58:14] 2024-06-18 23:58:00,401 | INFO     | . Timing measurements:
[2024-06-18 19:58:14] 2024-06-18 23:58:00,401 | INFO     | . get job = 0 s
[2024-06-18 19:58:14] 2024-06-18 23:58:00,402 | INFO     | . initial setup = 2 s
[2024-06-18 19:58:14] 2024-06-18 23:58:00,402 | INFO     | . payload setup = 9 s
[2024-06-18 19:58:14] 2024-06-18 23:58:00,402 | INFO     | . stage-in = 0 s
[2024-06-18 19:58:14] 2024-06-18 23:58:00,402 | INFO     | . payload execution = 19222 s
[2024-06-18 19:58:14] 2024-06-18 23:58:00,402 | INFO     | . stage-out = 1 s
[2024-06-18 19:58:14] 2024-06-18 23:58:00,402 | INFO     | . log creation = 0 s
[2024-06-18 19:58:14] 2024-06-18 23:58:00,402 | INFO     | ..............................
[2024-06-18 19:58:14] 2024-06-18 23:58:00,481 | INFO     | 
[2024-06-18 19:58:14] 2024-06-18 23:58:00,481 | INFO     | job summary report
[2024-06-18 19:58:14] 2024-06-18 23:58:00,481 | INFO     | --------------------------------------------------
[2024-06-18 19:58:14] 2024-06-18 23:58:00,481 | INFO     | PanDA job id: 6228014410
[2024-06-18 19:58:14] 2024-06-18 23:58:00,481 | INFO     | task id: 38921013
[2024-06-18 19:58:14] 2024-06-18 23:58:00,481 | INFO     | errors: (none)
[2024-06-18 19:58:14] 2024-06-18 23:58:00,482 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-18 19:58:14] 2024-06-18 23:58:00,482 | INFO     | pilot state: finished 
[2024-06-18 19:58:14] 2024-06-18 23:58:00,482 | INFO     | transexitcode: 0
[2024-06-18 19:58:14] 2024-06-18 23:58:00,482 | INFO     | exeerrorcode: 0
[2024-06-18 19:58:14] 2024-06-18 23:58:00,482 | INFO     | exeerrordiag: 
[2024-06-18 19:58:14] 2024-06-18 23:58:00,482 | INFO     | exitcode: 0
[2024-06-18 19:58:14] 2024-06-18 23:58:00,482 | INFO     | exitmsg: OK
[2024-06-18 19:58:14] 2024-06-18 23:58:00,482 | INFO     | cpuconsumptiontime: 164146 s
[2024-06-18 19:58:14] 2024-06-18 23:58:00,482 | INFO     | nevents: 400
[2024-06-18 19:58:14] 2024-06-18 23:58:00,482 | INFO     | neventsw: 0
[2024-06-18 19:58:14] 2024-06-18 23:58:00,482 | INFO     | pid: 297478
[2024-06-18 19:58:14] 2024-06-18 23:58:00,482 | INFO     | pgrp: 297478
[2024-06-18 19:58:14] 2024-06-18 23:58:00,482 | INFO     | corecount: 12
[2024-06-18 19:58:14] 2024-06-18 23:58:00,483 | INFO     | event service: False
[2024-06-18 19:58:14] 2024-06-18 23:58:00,483 | INFO     | sizes: {0: 2381158, 5: 2381364, 11: 2381420, 19235: 2414259, 19238: 2423235, 19240: 2423291, 19246: 2423589}
[2024-06-18 19:58:14] 2024-06-18 23:58:00,483 | INFO     | --------------------------------------------------
[2024-06-18 19:58:14] 2024-06-18 23:58:00,483 | INFO     | 
[2024-06-18 19:58:14] 2024-06-18 23:58:00,483 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/23
[2024-06-18 19:58:14] 2024-06-18 23:58:00,499 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-18 19:58:14] 2024-06-18 23:58:00,499 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-18 19:58:14] 2024-06-18 23:58:00,499 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-18 19:58:14] 2024-06-18 23:58:00,499 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-18 19:58:14] 2024-06-18 23:58:00,499 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-18 19:58:14] 2024-06-18 23:58:00,500 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-18 19:58:14] 2024-06-18 23:58:00,500 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-18 19:58:14] 2024-06-18 23:58:00,500 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-18 19:58:14] 2024-06-18 23:58:00,500 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-18 19:58:14] 2024-06-18 23:58:00,500 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-18 19:58:14] 2024-06-18 23:58:00,500 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-18 19:58:14] 2024-06-18 23:58:00,500 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-18 19:58:14] 2024-06-18 23:58:00,500 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-18 19:58:14] 2024-06-18 23:58:00,500 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-18 19:58:14] 2024-06-18 23:58:00,500 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-18 19:58:14] 2024-06-18 23:58:00,500 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-18 19:58:14] 2024-06-18 23:58:00,501 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-18 19:58:14] 2024-06-18 23:58:00,501 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-18 19:58:14] 2024-06-18 23:58:00,501 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-18 19:58:14] 2024-06-18 23:58:00,501 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-18 19:58:14] 2024-06-18 23:58:00,501 | INFO     | job 6228014410 has completed (purged errors)
[2024-06-18 19:58:14] 2024-06-18 23:58:00,501 | INFO     | overall cleanup function is called
[2024-06-18 19:58:14] 2024-06-18 23:58:01,506 | INFO     | --- collectZombieJob: --- 10, [297478]
[2024-06-18 19:58:14] 2024-06-18 23:58:01,507 | INFO     | zombie collector waiting for pid 297478
[2024-06-18 19:58:14] 2024-06-18 23:58:01,507 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-18 19:58:14] 2024-06-18 23:58:02,512 | INFO     | collected zombie processes
[2024-06-18 19:58:14] 2024-06-18 23:58:02,512 | INFO     | will now attempt to kill all subprocesses of pid=297478
[2024-06-18 19:58:14] 2024-06-18 23:58:02,593 | INFO     | process IDs to be killed: [297478] (in reverse order)
[2024-06-18 19:58:14] 2024-06-18 23:58:02,674 | WARNING  | found no corresponding commands to process id(s)
[2024-06-18 19:58:14] 2024-06-18 23:58:02,675 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-18 19:58:14] 2024-06-18 23:58:02,682 | INFO     | did not find any defunct processes belonging to 297478
[2024-06-18 19:58:14] 2024-06-18 23:58:02,687 | INFO     | did not find any defunct processes belonging to 297478
[2024-06-18 19:58:14] 2024-06-18 23:58:02,688 | INFO     | ready for new job
[2024-06-18 19:58:14] 2024-06-18 23:58:02,688 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-18 19:58:14] 2024-06-18 23:58:02,689 | INFO     | *************************************
[2024-06-18 19:58:14] 2024-06-18 23:58:02,689 | INFO     | ***  PanDA Pilot version 3.7.6.8  ***
[2024-06-18 19:58:14] 2024-06-18 23:58:02,689 | INFO     | *************************************
[2024-06-18 19:58:14] 2024-06-18 23:58:02,690 | INFO     | 
[2024-06-18 19:58:14] 2024-06-18 23:58:02,709 | INFO     | architecture information:
[2024-06-18 19:58:14] 2024-06-18 23:58:02,710 | INFO     | executing command: cat /etc/os-release
[2024-06-18 19:58:14] 2024-06-18 23:58:02,722 | INFO     | cat /etc/os-release:
[2024-06-18 19:58:14] NAME="CentOS Linux"
[2024-06-18 19:58:14] VERSION="7 (Core)"
[2024-06-18 19:58:14] ID="centos"
[2024-06-18 19:58:14] ID_LIKE="rhel fedora"
[2024-06-18 19:58:14] VERSION_ID="7"
[2024-06-18 19:58:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-18 19:58:14] ANSI_COLOR="0;31"
[2024-06-18 19:58:14] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-18 19:58:14] HOME_URL="https://www.centos.org/"
[2024-06-18 19:58:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-18 19:58:14] 
[2024-06-18 19:58:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-18 19:58:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-18 19:58:14] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-18 19:58:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-18 19:58:14] 
[2024-06-18 19:58:14] 2024-06-18 23:58:02,723 | INFO     | *************************************
[2024-06-18 19:58:14] 2024-06-18 23:58:03,226 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/23
[2024-06-18 19:58:14] 2024-06-18 23:58:03,239 | INFO     | sufficient remaining disk space (387088121856 B)
[2024-06-18 19:58:14] 2024-06-18 23:58:03,240 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-18 19:58:14] 2024-06-18 23:58:03,240 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-18 19:58:14] 2024-06-18 23:58:03,240 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-18 19:58:14] 2024-06-18 23:58:03,240 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-18 19:58:14] 2024-06-18 23:58:03,240 | INFO     | aborting loop
[2024-06-18 19:58:14] 2024-06-18 23:58:03,241 | INFO     | found 0 job(s) in 20 queues
[2024-06-18 19:58:14] 2024-06-18 23:58:03,241 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-18 19:58:14] 2024-06-18 23:58:03,241 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-18 19:58:14] 2024-06-18 23:58:03,514 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-18 19:58:14] 2024-06-18 23:58:03,578 | INFO     | all data control threads have been joined
[2024-06-18 19:58:14] 2024-06-18 23:58:04,090 | INFO     | all payload control threads have been joined
[2024-06-18 19:58:14] 2024-06-18 23:58:04,243 | INFO     | [job] job monitor thread has finished
[2024-06-18 19:58:14] 2024-06-18 23:58:04,243 | INFO     | [job] retrieve thread has finished
[2024-06-18 19:58:14] 2024-06-18 23:58:04,488 | INFO     | [payload] validate_pre thread has finished
[2024-06-18 19:58:14] 2024-06-18 23:58:04,582 | INFO     | [data] control thread has finished
[2024-06-18 19:58:14] 2024-06-18 23:58:04,762 | INFO     | [payload] failed_post thread has finished
[2024-06-18 19:58:14] 2024-06-18 23:58:04,842 | INFO     | all job control threads have been joined
[2024-06-18 19:58:14] 2024-06-18 23:58:04,922 | INFO     | [job] validate thread has finished
[2024-06-18 19:58:14] 2024-06-18 23:58:05,022 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-18 19:58:14] 2024-06-18 23:58:05,094 | INFO     | [payload] control thread has finished
[2024-06-18 19:58:14] 2024-06-18 23:58:05,155 | INFO     | [payload] validate_post thread has finished
[2024-06-18 19:58:14] 2024-06-18 23:58:05,486 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-18 19:58:14] 2024-06-18 23:58:05,504 | INFO     | [job] create_data_payload thread has finished
[2024-06-18 19:58:14] 2024-06-18 23:58:05,506 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-18 19:58:14] 2024-06-18 23:58:05,520 | INFO     | [data] copytool_out thread has finished
[2024-06-18 19:58:14] 2024-06-18 23:58:05,650 | INFO     | [payload] execute_payloads thread has finished
[2024-06-18 19:58:14] 2024-06-18 23:58:05,738 | INFO     | [data] copytool_in thread has finished
[2024-06-18 19:58:14] 2024-06-18 23:58:05,846 | INFO     | [job] control thread has finished
[2024-06-18 19:58:14] 2024-06-18 23:58:06,490 | INFO     | [job] queue monitor thread has finished
[2024-06-18 19:58:14] 2024-06-18 23:58:09,510 | INFO     | [data] queue_monitor thread has finished
[2024-06-18 19:58:14] 2024-06-18 23:58:09,524 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139996859320128)>', '<ExcThread(monitor, started 139995994121984)>']
[2024-06-18 19:58:14] 2024-06-18 23:58:10,262 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-18 19:58:14] 2024-06-18 23:58:10,263 | INFO     | [monitor] control thread has ended
[2024-06-18 19:58:14] 2024-06-18 23:58:14,546 | INFO     | all workflow threads have been joined
[2024-06-18 19:58:14] 2024-06-18 23:58:14,547 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-18 19:58:14] 2024-06-18 23:58:14,547 | INFO     | traces error code: 0
[2024-06-18 19:58:14] 2024-06-18 23:58:14,547 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-18 19:58:14] 2024-06-18 23:58:14,616 [wrapper] ==== pilot stdout END ====
[2024-06-18 19:58:14] 2024-06-18 23:58:14,618 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-18 19:58:14] 2024-06-18 23:58:14,620 [wrapper] pilotpid: 289098
[2024-06-18 19:58:14] 2024-06-18 23:58:14,621 [wrapper] Pilot exit status: 0
[2024-06-18 19:58:14] 2024-06-18 23:58:14,694 [wrapper] pandaids: 6228014410
[2024-06-18 19:58:14] 2024-06-18 23:58:14,734 [wrapper] cleanup supervisor_pilot 1136897 289099
[2024-06-18 19:58:14] 2024-06-18 23:58:14,737 [wrapper] Test setup, not cleaning
[2024-06-18 19:58:14] 2024-06-18 23:58:14,738 [wrapper] ==== wrapper stdout END ====
[2024-06-18 19:58:14] 2024-06-18 23:58:14,740 [wrapper] ==== wrapper stderr END ====
[2024-06-18 19:58:14] 2024-06-18 23:58:14,743 [wrapper] apfmon messages muted
[2024-06-18 19:58:14]  *** Error codes and diagnostics ***
[2024-06-18 19:58:14]     "exeErrorCode": 0,
[2024-06-18 19:58:14]     "exeErrorDiag": "",
[2024-06-18 19:58:14]     "pilotErrorCode": 0,
[2024-06-18 19:58:14]     "pilotErrorDiag": "",
[2024-06-18 19:58:14]  *** Listing of results directory ***
[2024-06-18 19:58:14] total 876260
[2024-06-18 19:58:14] -rw-r--r-- 1 boinc boinc    469443 Jun 11 17:27 pilot3.tar.gz
[2024-06-18 19:58:14] -rw-r--r-- 1 boinc boinc      5654 Jun 11 18:26 queuedata.json
[2024-06-18 19:58:14] -rwx------ 1 boinc boinc     32308 Jun 11 18:30 runpilot2-wrapper.sh
[2024-06-18 19:58:14] -rw-r--r-- 1 boinc boinc       100 Jun 18 14:35 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-18 19:58:14] -rwxr-xr-x 1 boinc boinc      7986 Jun 18 14:35 run_atlas
[2024-06-18 19:58:14] -rw-r--r-- 1 boinc boinc       105 Jun 18 14:35 job.xml
[2024-06-18 19:58:14] -rw-r--r-- 1 boinc boinc      7599 Jun 18 14:36 init_data.xml
[2024-06-18 19:58:14] -rw-r--r-- 2 boinc boinc 542623792 Jun 18 14:36 EVNT.38776210._000549.pool.root.1
[2024-06-18 19:58:14] -rw-r--r-- 2 boinc boinc     17537 Jun 18 14:36 start_atlas.sh
[2024-06-18 19:58:14] drwxrwx--x 2 boinc boinc      4096 Jun 18 14:36 shared
[2024-06-18 19:58:14] -rw-r--r-- 2 boinc boinc    482056 Jun 18 14:36 input.tar.gz
[2024-06-18 19:58:14] -rw-r--r-- 1 boinc boinc         0 Jun 18 14:36 boinc_lockfile
[2024-06-18 19:58:14] -rw-r--r-- 1 boinc boinc      2647 Jun 18 14:36 pandaJob.out
[2024-06-18 19:58:14] -rw------- 1 boinc boinc       460 Jun 18 14:36 setup.sh.local
[2024-06-18 19:58:14] -rw------- 1 boinc boinc   1023192 Jun 18 14:36 agis_schedconf.cvmfs.json
[2024-06-18 19:58:14] -rw------- 1 boinc boinc   1317943 Jun 18 14:36 cric_ddmendpoints.json
[2024-06-18 19:58:14] drwx------ 4 boinc boinc      4096 Jun 18 14:36 pilot3
[2024-06-18 19:58:14] -rw------- 1 boinc boinc 346177811 Jun 18 19:57 HITS.38921013._023108.pool.root.1
[2024-06-18 19:58:14] -rw-r--r-- 1 boinc boinc       532 Jun 18 19:57 boinc_task_state.xml
[2024-06-18 19:58:14] -rw------- 1 boinc boinc        95 Jun 18 19:57 pilot_heartbeat.json
[2024-06-18 19:58:14] -rw------- 1 boinc boinc      1028 Jun 18 19:57 memory_monitor_summary.json
[2024-06-18 19:58:14] -rw------- 1 boinc boinc         0 Jun 18 19:57 agis_ddmendpoints.agis.ALL.json
[2024-06-18 19:58:14] -rw------- 1 boinc boinc    502937 Jun 18 19:57 log.38921013._023108.job.log.tgz.1
[2024-06-18 19:58:14] -rw------- 1 boinc boinc      7690 Jun 18 19:58 heartbeat.json
[2024-06-18 19:58:14] -rw-r--r-- 1 boinc boinc        29 Jun 18 19:58 wrapper_checkpoint.txt
[2024-06-18 19:58:14] -rw-r--r-- 1 boinc boinc      8192 Jun 18 19:58 boinc_mmap_file
[2024-06-18 19:58:14] -rw------- 1 boinc boinc      4343 Jun 18 19:58 pilotlog.txt
[2024-06-18 19:58:14] -rw------- 1 boinc boinc   1974715 Jun 18 19:58 log.38921013._023108.job.log.1
[2024-06-18 19:58:14] -rw------- 1 boinc boinc       357 Jun 18 19:58 output.list
[2024-06-18 19:58:14] -rw-r--r-- 1 boinc boinc       620 Jun 18 19:58 runtime_log
[2024-06-18 19:58:14] -rw------- 1 boinc boinc   2498560 Jun 18 19:58 result.tar.gz
[2024-06-18 19:58:14] -rw-r--r-- 1 boinc boinc     11478 Jun 18 19:58 runtime_log.err
[2024-06-18 19:58:14] -rw------- 1 boinc boinc       644 Jun 18 19:58 hKoMDmpBPb5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmzNbKDmH1zoPo.diag
[2024-06-18 19:58:14] -rw-r--r-- 1 boinc boinc     21240 Jun 18 19:58 stderr.txt
[2024-06-18 19:58:14] HITS file was successfully produced:
[2024-06-18 19:58:14] -rw------- 1 boinc boinc 346177811 Jun 18 19:57 shared/HITS.pool.root.1
[2024-06-18 19:58:14]  *** Contents of shared directory: ***
[2024-06-18 19:58:14] total 870916
[2024-06-18 19:58:14] -rw-r--r-- 2 boinc boinc 542623792 Jun 18 14:36 ATLAS.root_0
[2024-06-18 19:58:14] -rw-r--r-- 2 boinc boinc     17537 Jun 18 14:36 start_atlas.sh
[2024-06-18 19:58:14] -rw-r--r-- 2 boinc boinc    482056 Jun 18 14:36 input.tar.gz
[2024-06-18 19:58:14] -rw------- 1 boinc boinc 346177811 Jun 18 19:57 HITS.pool.root.1
[2024-06-18 19:58:14] -rw------- 1 boinc boinc   2498560 Jun 18 19:58 result.tar.gz
19:58:16 (281830): run_atlas exited; CPU time 163801.940532
19:58:16 (281830): called boinc_finish(0)

</stderr_txt>
]]>

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