Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2024-06-11 19:36:58 (8944): Detected: vboxwrapper 26206
2024-06-11 19:36:58 (8944): Detected: BOINC client v8.0.2
2024-06-11 19:36:59 (8944): Detected: VirtualBox VboxManage Interface (Version: 7.0.14)
2024-06-11 19:36:59 (8944): Successfully copied 'init_data.xml' to the shared directory.
2024-06-11 19:37:00 (8944): Create VM. (boinc_2225b7935c41091d, slot#13)
2024-06-11 19:37:00 (8944): Setting Memory Size for VM. (4800MB)
2024-06-11 19:37:00 (8944): Setting CPU Count for VM. (8)
2024-06-11 19:37:01 (8944): Setting Chipset Options for VM.
2024-06-11 19:37:01 (8944): Setting Graphics Controller Options for VM.
2024-06-11 19:37:01 (8944): Setting Boot Options for VM.
2024-06-11 19:37:01 (8944): Setting Network Configuration for NAT.
2024-06-11 19:37:02 (8944): Enabling VM Network Access.
2024-06-11 19:37:02 (8944): Disabling USB Support for VM.
2024-06-11 19:37:02 (8944): Disabling COM Port Support for VM.
2024-06-11 19:37:03 (8944): Disabling LPT Port Support for VM.
2024-06-11 19:37:03 (8944): Disabling Audio Support for VM.
2024-06-11 19:37:03 (8944): Disabling Clipboard Support for VM.
2024-06-11 19:37:03 (8944): Disabling Drag and Drop Support for VM.
2024-06-11 19:37:04 (8944): Adding storage controller(s) to VM.
2024-06-11 19:37:04 (8944): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-06-11 19:37:07 (8944): Adding VirtualBox Guest Additions to VM.
2024-06-11 19:37:07 (8944): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-06-11 19:37:07 (8944): forwarding host port 52651 to guest port 80
2024-06-11 19:37:07 (8944): Enabling remote desktop for VM.
2024-06-11 19:37:08 (8944): Enabling shared directory for VM.
2024-06-11 19:37:09 (8944): Starting VM using VBoxManage interface. (boinc_2225b7935c41091d, slot#13)
2024-06-11 19:37:15 (8944): Successfully started VM. (PID = '5828')
2024-06-11 19:37:15 (8944): Reporting VM Process ID to BOINC.
2024-06-11 19:37:15 (8944): Guest Log: BIOS: VirtualBox 7.0.14
2024-06-11 19:37:15 (8944): Guest Log: CPUID EDX: 0x178bfbff
2024-06-11 19:37:15 (8944): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-06-11 19:37:15 (8944): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-06-11 19:37:15 (8944): VM state change detected. (old = 'poweredoff', new = 'running')
2024-06-11 19:37:15 (8944): Detected: Web Application Enabled (http://localhost:52651)
2024-06-11 19:37:15 (8944): Detected: Remote Desktop Enabled (localhost:52652)
2024-06-11 19:37:15 (8944): Preference change detected
2024-06-11 19:37:15 (8944): Setting CPU throttle for VM. (100%)
2024-06-11 19:37:15 (8944): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2024-06-11 19:37:17 (8944): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-06-11 19:37:17 (8944): Guest Log: BIOS: Booting from Hard Disk...
2024-06-11 19:37:20 (8944): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-06-11 19:37:20 (8944): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-06-11 19:37:20 (8944): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-06-11 19:37:20 (8944): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-06-11 19:37:20 (8944): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-06-11 19:37:20 (8944): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-06-11 19:37:20 (8944): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-06-11 19:37:20 (8944): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-06-11 19:37:20 (8944): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-06-11 19:37:20 (8944): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-06-11 19:37:20 (8944): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-06-11 19:37:20 (8944): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-06-11 19:37:20 (8944): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-06-11 19:37:20 (8944): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-06-11 19:37:20 (8944): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-06-11 19:37:20 (8944): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-06-11 19:37:20 (8944): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-06-11 19:37:20 (8944): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-06-11 19:37:20 (8944): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-06-11 19:37:20 (8944): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-06-11 19:37:20 (8944): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-06-11 19:37:20 (8944): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-06-11 19:37:20 (8944): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-06-11 19:37:20 (8944): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-06-11 19:37:20 (8944): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-06-11 19:37:20 (8944): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-06-11 19:37:20 (8944): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-06-11 19:37:20 (8944): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-06-11 19:37:20 (8944): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-06-11 19:37:20 (8944): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-06-11 19:37:20 (8944): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-06-11 19:37:20 (8944): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-06-11 19:37:24 (8944): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-06-11 19:37:24 (8944): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-06-11 19:37:31 (8944): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-06-11 19:37:31 (8944): Guest Log: 00:00:00.000186 main     Log opened 2024-06-11T19:37:28.574296000Z
2024-06-11 19:37:31 (8944): Guest Log: 00:00:00.000289 main     OS Product: Linux
2024-06-11 19:37:31 (8944): Guest Log: 00:00:00.000315 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-06-11 19:37:31 (8944): Guest Log: 00:00:00.000335 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-06-11 19:37:31 (8944): Guest Log: 00:00:00.000355 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-06-11 19:37:31 (8944): Guest Log: 00:00:00.000355 main     Process ID: 1366
2024-06-11 19:37:31 (8944): Guest Log: 00:00:00.000356 main     Package type: LINUX_64BITS_GENERIC
2024-06-11 19:37:31 (8944): Guest Log: 00:00:00.001019 main     5.2.32 r132073 started. Verbose level = 0
2024-06-11 19:37:31 (8944): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-06-11 19:37:31 (8944): Guest Log: [INFO] Mounting shared directory
2024-06-11 19:37:31 (8944): Guest Log: [INFO] Checking for init_data.xml
2024-06-11 19:37:33 (8944): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-06-11 19:37:33 (8944): Guest Log: [INFO] Detected branch: prod
2024-06-11 19:37:34 (8944): Guest Log: This is the prod version of the ATLAS job wrapper
2024-06-11 19:37:34 (8944): Guest Log: Copying input files
2024-06-11 19:37:37 (8944): Guest Log: Copied input files into RunAtlas.
2024-06-11 19:37:37 (8944): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-06-11 19:37:37 (8944): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-06-11 19:37:37 (8944): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-06-11 19:37:37 (8944): Guest Log: Further information can be found at the LHC@home message board.
2024-06-11 19:37:41 (8944): Guest Log: 00:00:10.034350 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 385 140 000ns (GuestNow=1 718 127 460 191 118 000 ns GuestLast=1 718 134 648 576 258 000 ns fSetTimeLastLoop=true )
2024-06-11 19:37:45 (8944): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-06-11 19:37:46 (8944): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-06-11 19:37:46 (8944): Guest Log: 2.6.3.0 1641 0 32084 133759 4 1 3117205 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2024-06-11 19:37:46 (8944): Guest Log: copied the webapp to /var/www
2024-06-11 19:37:46 (8944): Guest Log: ATHENA_PROC_NUMBER=8
2024-06-11 19:37:46 (8944): Guest Log: ATHENA_CORE_NUMBER=8
2024-06-11 19:37:47 (8944): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-06-11 19:37:47 (8944): Guest Log:  *** Starting ATLAS job. (PandaID=6227297795 taskID=38921007) ***
2024-06-11 21:18:52 (8944): Status Report: Elapsed Time: '6000.000000'
2024-06-11 21:18:52 (8944): Status Report: CPU Time: '39280.500000'
2024-06-11 23:00:36 (8944): Status Report: Elapsed Time: '12000.000000'
2024-06-11 23:00:36 (8944): Status Report: CPU Time: '86081.765625'
2024-06-12 00:12:51 (8944): Guest Log:  *** Job finished ***
2024-06-12 00:12:51 (8944): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-06-12 00:12:51 (8944): Guest Log: 2024-06-11 22:12:33,974 | INFO     | [data] queue_monitor thread has finished
2024-06-12 00:12:51 (8944): Guest Log: 2024-06-11 22:12:37,207 | INFO     | job.realtimelogging is not enabled
2024-06-12 00:12:51 (8944): Guest Log: 2024-06-11 22:12:38,218 | INFO     | [payload] run_realtimelog thread has finished
2024-06-12 00:12:51 (8944): Guest Log: 2024-06-11 22:12:38,491 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140611898443584)>', '<ExcThread(monitor, started 140610585491200)>']
2024-06-12 00:12:51 (8944): Guest Log: 2024-06-11 22:12:38,675 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-06-12 00:12:51 (8944): Guest Log: 2024-06-11 22:12:38,675 | INFO     | [monitor] control thread has ended
2024-06-12 00:12:51 (8944): Guest Log: 2024-06-11 22:12:43,497 | INFO     | all workflow threads have been joined
2024-06-12 00:12:51 (8944): Guest Log: 2024-06-11 22:12:43,497 | INFO     | end of generic workflow (traces error code: 0)
2024-06-12 00:12:51 (8944): Guest Log: 2024-06-11 22:12:43,497 | INFO     | traces error code: 0
2024-06-12 00:12:51 (8944): Guest Log: 2024-06-11 22:12:43,497 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-06-12 00:12:51 (8944): Guest Log: 2024-06-11 22:12:43,585 [wrapper] ==== pilot stdout END ====
2024-06-12 00:12:51 (8944): Guest Log: 2024-06-11 22:12:43,594 [wrapper] ==== wrapper stdout RESUME ====
2024-06-12 00:12:51 (8944): Guest Log: 2024-06-11 22:12:43,601 [wrapper] pilotpid: 6564
2024-06-12 00:12:51 (8944): Guest Log: 2024-06-11 22:12:43,607 [wrapper] Pilot exit status: 0
2024-06-12 00:12:51 (8944): Guest Log: 2024-06-11 22:12:43,698 [wrapper] pandaids: 6227297795
2024-06-12 00:12:51 (8944): Guest Log: 2024-06-11 22:12:43,738 [wrapper] cleanup supervisor_pilot 18064 6565
2024-06-12 00:12:51 (8944): Guest Log: 2024-06-11 22:12:43,746 [wrapper] Test setup, not cleaning
2024-06-12 00:12:51 (8944): Guest Log: 2024-06-11 22:12:43,754 [wrapper] ==== wrapper stdout END ====
2024-06-12 00:12:51 (8944): Guest Log: 2024-06-11 22:12:43,760 [wrapper] ==== wrapper stderr END ====
2024-06-12 00:12:51 (8944): Guest Log: 2024-06-11 22:12:43,775 [wrapper] apfmon messages muted
2024-06-12 00:12:51 (8944): Guest Log:  *** Error codes and diagnostics ***
2024-06-12 00:12:51 (8944): Guest Log:     "exeErrorCode": 0,
2024-06-12 00:12:51 (8944): Guest Log:     "exeErrorDiag": "",
2024-06-12 00:12:51 (8944): Guest Log:     "pilotErrorCode": 0,
2024-06-12 00:12:51 (8944): Guest Log:     "pilotErrorDiag": "",
2024-06-12 00:12:51 (8944): Guest Log:  *** Listing of results directory ***
2024-06-12 00:12:51 (8944): Guest Log: total 353300
2024-06-12 00:12:51 (8944): Guest Log: -rw-r--r--. 1 atlas atlas    469443 Jun 11 11:37 pilot3.tar.gz
2024-06-12 00:12:51 (8944): Guest Log: -rw-r--r--. 1 atlas atlas      5654 Jun 11 12:01 queuedata.json
2024-06-12 00:12:51 (8944): Guest Log: -rwx------. 1 atlas atlas     32308 Jun 11 12:02 runpilot2-wrapper.sh
2024-06-12 00:12:51 (8944): Guest Log: -rwxr-xr-x. 1 atlas atlas     17537 Jun 11 17:37 start_atlas.sh
2024-06-12 00:12:51 (8944): Guest Log: -rwxr-xr-x. 1 atlas atlas    482048 Jun 11 17:37 input.tar.gz
2024-06-12 00:12:51 (8944): Guest Log: -rwxr-xr-x. 1 atlas atlas      8974 Jun 11 17:37 init_data.xml
2024-06-12 00:12:51 (8944): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun 11 17:37 EVNT.38776201._000824.pool.root.1 -> /data/./ATLAS.root_0
2024-06-12 00:12:51 (8944): Guest Log: -rw-r--r--. 1 atlas atlas      2631 Jun 11 17:37 pandaJob.out
2024-06-12 00:12:51 (8944): Guest Log: -rw-------. 1 atlas atlas       424 Jun 11 17:37 setup.sh.local
2024-06-12 00:12:51 (8944): Guest Log: -rw-------. 1 atlas atlas   1022336 Jun 11 17:38 agis_schedconf.cvmfs.json
2024-06-12 00:12:51 (8944): Guest Log: -rw-------. 1 atlas atlas   1324173 Jun 11 17:38 cric_ddmendpoints.json
2024-06-12 00:12:51 (8944): Guest Log: drwx------. 4 atlas atlas      4096 Jun 11 17:38 pilot3
2024-06-12 00:12:51 (8944): Guest Log: -rw-------. 1 atlas atlas 355314115 Jun 11 22:11 HITS.38921007._032763.pool.root.1
2024-06-12 00:12:51 (8944): Guest Log: -rw-------. 1 atlas atlas      1044 Jun 11 22:12 memory_monitor_summary.json
2024-06-12 00:12:51 (8944): Guest Log: -rw-------. 1 atlas atlas        95 Jun 11 22:12 pilot_heartbeat.json
2024-06-12 00:12:51 (8944): Guest Log: -rw-------. 1 atlas atlas         0 Jun 11 22:12 agis_ddmendpoints.agis.ALL.json
2024-06-12 00:12:51 (8944): Guest Log: -rw-------. 1 atlas atlas    375689 Jun 11 22:12 log.38921007._032763.job.log.tgz.1
2024-06-12 00:12:51 (8944): Guest Log: -rw-------. 1 atlas atlas      7720 Jun 11 22:12 heartbeat.json
2024-06-12 00:12:51 (8944): Guest Log: -rw-------. 1 atlas atlas      4343 Jun 11 22:12 pilotlog.txt
2024-06-12 00:12:51 (8944): Guest Log: -rw-------. 1 atlas atlas   1122933 Jun 11 22:12 log.38921007._032763.job.log.1
2024-06-12 00:12:51 (8944): Guest Log: -rw-------. 1 atlas atlas       357 Jun 11 22:12 output.list
2024-06-12 00:12:51 (8944): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun 11 22:12 runtime_log
2024-06-12 00:12:51 (8944): Guest Log: -rw-------. 1 atlas atlas   1515520 Jun 11 22:12 result.tar.gz
2024-06-12 00:12:51 (8944): Guest Log: -rw-r--r--. 1 atlas atlas     10937 Jun 11 22:12 runtime_log.err
2024-06-12 00:12:51 (8944): Guest Log: -rw-------. 1 atlas atlas       648 Jun 11 22:12 e08KDmHOFb5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmqoaKDmbpJOcn.diag
2024-06-12 00:12:51 (8944): Guest Log: Looking for outputfile HITS.38921007._032763.pool.root.1
2024-06-12 00:12:51 (8944): Guest Log: HITS file was successfully produced
2024-06-12 00:12:51 (8944): Guest Log: -rw-------. 1 atlas atlas 355314115 Jun 11 22:11 /home/atlas/RunAtlas/HITS.38921007._032763.pool.root.1
2024-06-12 00:12:54 (8944): Guest Log: Successfully finished the ATLAS job!
2024-06-12 00:12:54 (8944): Guest Log: Copying the results back to the shared directory!
2024-06-12 00:12:54 (8944): Guest Log:  *** Contents of shared directory: ***
2024-06-12 00:12:54 (8944): Guest Log: total 919472
2024-06-12 00:12:54 (8944): Guest Log: -rwxrwxrwx. 1 root root 584190200 Jun 11 17:36 ATLAS.root_0
2024-06-12 00:12:54 (8944): Guest Log: -rwxrwxrwx. 1 root root 355314115 Jun 11  2024 HITS.pool.root.1
2024-06-12 00:12:54 (8944): Guest Log: -rwxrwxrwx. 1 root root      8974 Jun 11 17:36 init_data.xml
2024-06-12 00:12:54 (8944): Guest Log: -rwxrwxrwx. 1 root root    482048 Jun 11 17:36 input.tar.gz
2024-06-12 00:12:54 (8944): Guest Log: -rwxrwxrwx. 1 root root   1515520 Jun 11  2024 result.tar.gz
2024-06-12 00:12:54 (8944): Guest Log: -rwxrwxrwx. 1 root root     17537 Jun 11 17:36 start_atlas.sh
2024-06-12 00:12:54 (8944): Guest Log:  *** Success! Shutting down the machine. ***
2024-06-12 00:12:54 (8944): VM Completion File Detected.
2024-06-12 00:12:54 (8944): Powering off VM.
2024-06-12 00:12:55 (8944): Successfully stopped VM.
2024-06-12 00:12:55 (8944): Deregistering VM. (boinc_2225b7935c41091d, slot#13)
2024-06-12 00:12:55 (8944): Removing network bandwidth throttle group from VM.
2024-06-12 00:12:55 (8944): Removing VM from VirtualBox.
00:13:00 (8944): called boinc_finish(0)

</stderr_txt>
]]>

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