Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:15:16 (229709): wrapper (7.7.26015): starting
11:15:16 (229709): wrapper: running run_atlas (--nthreads 8)
[2024-06-11 11:15:16] Arguments: --nthreads 8
[2024-06-11 11:15:16] Threads: 8
[2024-06-11 11:15:16] Checking for CVMFS
[2024-06-11 11:15:16] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-11 11:15:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-11 11:15:16] Running cvmfs_config stat atlas.cern.ch
[2024-06-11 11:15:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-11 11:15:18] 2.11.2.0 214642 19708 148256 133754 3 418 15238296 18432000 18835 130560 0 82132188 99.498 78879097 41299 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-06-11 11:15:18] CVMFS is ok
[2024-06-11 11:15:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-11 11:15:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-11 11:15:18] Further information can be found at the LHC@home message board.
[2024-06-11 11:15:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-11 11:15:18] Checking for apptainer binary...
[2024-06-11 11:15:18] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-11 11:15:18] Running /usr/bin/apptainer --version
[2024-06-11 11:15:18] apptainer version 1.3.1-1.el7
[2024-06-11 11:15:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-11 11:15:23] c-211-33-2.aglt2.org
[2024-06-11 11:15:23] apptainer works
[2024-06-11 11:15:23] Set ATHENA_PROC_NUMBER=8
[2024-06-11 11:15:23] Set ATHENA_CORE_NUMBER=8
[2024-06-11 11:15:23] Starting ATLAS job with PandaID=6227184322
[2024-06-11 11:15:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-12 03:00:25]  *** The last 200 lines of the pilot log: ***
[2024-06-12 03:00:25] 2024-06-12 07:00:07,150 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-12 03:00:25] 2024-06-12 07:00:07,150 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-12 03:00:25] 2024-06-12 07:00:07,184 | INFO     | fitting pss+swap vs Time
[2024-06-12 03:00:25] 2024-06-12 07:00:07,185 | INFO     | model: linear, x: [1718119275.0, 1718119336.0, 1718119397.0, 1718119458.0, 1718119519.0, 1718119580.0, 1718119641.0, 1718119702.0, 1718119763.0, 1718119824.0, 1718
[2024-06-12 03:00:25] 2024-06-12 07:00:07,185 | INFO     | sum of square deviations: 243827826638.9121
[2024-06-12 03:00:25] 2024-06-12 07:00:07,205 | INFO     | sum of deviations: 1304430383230.046
[2024-06-12 03:00:25] 2024-06-12 07:00:07,205 | INFO     | mean x: 1718147396.2210183
[2024-06-12 03:00:25] 2024-06-12 07:00:07,205 | INFO     | mean y: 2492498.03900325
[2024-06-12 03:00:25] 2024-06-12 07:00:07,205 | INFO     | -- intersect: -9189254389.068008
[2024-06-12 03:00:25] 2024-06-12 07:00:07,205 | INFO     | intersect: -9189254389.068008
[2024-06-12 03:00:25] 2024-06-12 07:00:07,207 | INFO     | chi2: 15.547852443484079
[2024-06-12 03:00:25] 2024-06-12 07:00:07,208 | INFO     | model: linear, x: [1718119275.0, 1718119336.0, 1718119397.0, 1718119458.0, 1718119519.0, 1718119580.0, 1718119641.0, 1718119702.0, 1718119763.0, 1718119824.0, 1718
[2024-06-12 03:00:25] 2024-06-12 07:00:07,208 | INFO     | sum of square deviations: 239886726346.60995
[2024-06-12 03:00:25] 2024-06-12 07:00:07,226 | INFO     | sum of deviations: 1555556959267.6648
[2024-06-12 03:00:25] 2024-06-12 07:00:07,226 | INFO     | mean x: 1718147243.721133
[2024-06-12 03:00:25] 2024-06-12 07:00:07,226 | INFO     | mean y: 2502204.553376906
[2024-06-12 03:00:25] 2024-06-12 07:00:07,226 | INFO     | -- intersect: -11138905837.15395
[2024-06-12 03:00:25] 2024-06-12 07:00:07,227 | INFO     | intersect: -11138905837.15395
[2024-06-12 03:00:25] 2024-06-12 07:00:07,228 | INFO     | chi2: 12.346221997116315
[2024-06-12 03:00:25] 2024-06-12 07:00:07,228 | INFO     | current chi2=12.346221997116315 (change=20.592107225133393 %)
[2024-06-12 03:00:25] 2024-06-12 07:00:07,228 | INFO     | right removable region: 917
[2024-06-12 03:00:25] 2024-06-12 07:00:07,229 | INFO     | model: linear, x: [1718119580.0, 1718119641.0, 1718119702.0, 1718119763.0, 1718119824.0, 1718119885.0, 1718119946.0, 1718120007.0, 1718120068.0, 1718120129.0, 1718
[2024-06-12 03:00:25] 2024-06-12 07:00:07,229 | INFO     | sum of square deviations: 239886657966.1669
[2024-06-12 03:00:25] 2024-06-12 07:00:07,246 | INFO     | sum of deviations: 970484714893.1677
[2024-06-12 03:00:25] 2024-06-12 07:00:07,246 | INFO     | mean x: 1718147548.7222223
[2024-06-12 03:00:25] 2024-06-12 07:00:07,246 | INFO     | mean y: 2505418.545751634
[2024-06-12 03:00:25] 2024-06-12 07:00:07,246 | INFO     | -- intersect: -6948426943.024988
[2024-06-12 03:00:25] 2024-06-12 07:00:07,246 | INFO     | intersect: -6948426943.024988
[2024-06-12 03:00:25] 2024-06-12 07:00:07,247 | INFO     | chi2: 10.756703662501018
[2024-06-12 03:00:25] 2024-06-12 07:00:07,247 | INFO     | current chi2=10.756703662501018 (change=30.815502001956386 %)
[2024-06-12 03:00:25] 2024-06-12 07:00:07,248 | INFO     | model: linear, x: [1718119885.0, 1718119946.0, 1718120007.0, 1718120068.0, 1718120129.0, 1718120190.0, 1718120251.0, 1718120312.0, 1718120373.0, 1718120434.0, 1718
[2024-06-12 03:00:25] 2024-06-12 07:00:07,248 | INFO     | sum of square deviations: 235988187768.419
[2024-06-12 03:00:25] 2024-06-12 07:00:07,264 | INFO     | sum of deviations: 697798753558.6675
[2024-06-12 03:00:25] 2024-06-12 07:00:07,265 | INFO     | mean x: 1718147701.2234392
[2024-06-12 03:00:25] 2024-06-12 07:00:07,265 | INFO     | mean y: 2516082.398685652
[2024-06-12 03:00:25] 2024-06-12 07:00:07,265 | INFO     | -- intersect: -5077913305.532953
[2024-06-12 03:00:25] 2024-06-12 07:00:07,265 | INFO     | intersect: -5077913305.532953
[2024-06-12 03:00:25] 2024-06-12 07:00:07,266 | INFO     | chi2: 7.651037465629506
[2024-06-12 03:00:25] 2024-06-12 07:00:07,266 | INFO     | current chi2=7.651037465629506 (change=28.87191368577146 %)
[2024-06-12 03:00:25] 2024-06-12 07:00:07,267 | INFO     | model: linear, x: [1718120190.0, 1718120251.0, 1718120312.0, 1718120373.0, 1718120434.0, 1718120495.0, 1718120556.0, 1718120617.0, 1718120678.0, 1718120739.0, 1718
[2024-06-12 03:00:25] 2024-06-12 07:00:07,267 | INFO     | sum of square deviations: 232132183483.16748
[2024-06-12 03:00:25] 2024-06-12 07:00:07,284 | INFO     | sum of deviations: 483500370961.3215
[2024-06-12 03:00:25] 2024-06-12 07:00:07,284 | INFO     | mean x: 1718147853.7246697
[2024-06-12 03:00:25] 2024-06-12 07:00:07,284 | INFO     | mean y: 2524556.405286344
[2024-06-12 03:00:25] 2024-06-12 07:00:07,284 | INFO     | -- intersect: -3576148216.0520244
[2024-06-12 03:00:25] 2024-06-12 07:00:07,284 | INFO     | intersect: -3576148216.0520244
[2024-06-12 03:00:25] 2024-06-12 07:00:07,285 | INFO     | chi2: 5.801843998360776
[2024-06-12 03:00:25] 2024-06-12 07:00:07,285 | INFO     | current chi2=5.801843998360776 (change=24.16918588591153 %)
[2024-06-12 03:00:25] 2024-06-12 07:00:07,286 | INFO     | left removable region: 30
[2024-06-12 03:00:25] 2024-06-12 07:00:07,286 | INFO     | model: linear, x: [1718121106.0, 1718121166.0, 1718121227.0, 1718121288.0, 1718121349.0, 1718121410.0, 1718121471.0, 1718121532.0, 1718121593.0, 1718121654.0, 1718
[2024-06-12 03:00:25] 2024-06-12 07:00:07,287 | INFO     | sum of square deviations: 216395648395.4519
[2024-06-12 03:00:25] 2024-06-12 07:00:07,307 | INFO     | sum of deviations: 374804648000.4805
[2024-06-12 03:00:25] 2024-06-12 07:00:07,307 | INFO     | mean x: 1718148128.2266066
[2024-06-12 03:00:25] 2024-06-12 07:00:07,307 | INFO     | mean y: 2549208.2762119505
[2024-06-12 03:00:25] 2024-06-12 07:00:07,307 | INFO     | -- intersect: -2973341985.4128404
[2024-06-12 03:00:25] 2024-06-12 07:00:07,307 | INFO     | intersect: -2973341985.4128404
[2024-06-12 03:00:25] 2024-06-12 07:00:07,308 | INFO     | chi2: 0.37776775252830613
[2024-06-12 03:00:25] 2024-06-12 07:00:07,309 | INFO     | -- intersect: -2973341985.4128404
[2024-06-12 03:00:25] 2024-06-12 07:00:07,309 | INFO     | current memory leak: 1.73 B/s (using 887 data points, chi2=0.38)
[2024-06-12 03:00:25] 2024-06-12 07:00:07,314 | INFO     | ..............................
[2024-06-12 03:00:25] 2024-06-12 07:00:07,314 | INFO     | . Timing measurements:
[2024-06-12 03:00:25] 2024-06-12 07:00:07,314 | INFO     | . get job = 0 s
[2024-06-12 03:00:25] 2024-06-12 07:00:07,314 | INFO     | . initial setup = 3 s
[2024-06-12 03:00:25] 2024-06-12 07:00:07,315 | INFO     | . payload setup = 96 s
[2024-06-12 03:00:25] 2024-06-12 07:00:07,315 | INFO     | . stage-in = 0 s
[2024-06-12 03:00:25] 2024-06-12 07:00:07,315 | INFO     | . payload execution = 56347 s
[2024-06-12 03:00:25] 2024-06-12 07:00:07,315 | INFO     | . stage-out = 9 s
[2024-06-12 03:00:25] 2024-06-12 07:00:07,315 | INFO     | . log creation = 3 s
[2024-06-12 03:00:25] 2024-06-12 07:00:07,315 | INFO     | ..............................
[2024-06-12 03:00:25] 2024-06-12 07:00:07,516 | INFO     | 
[2024-06-12 03:00:25] 2024-06-12 07:00:07,516 | INFO     | job summary report
[2024-06-12 03:00:25] 2024-06-12 07:00:07,516 | INFO     | --------------------------------------------------
[2024-06-12 03:00:25] 2024-06-12 07:00:07,516 | INFO     | PanDA job id: 6227184322
[2024-06-12 03:00:25] 2024-06-12 07:00:07,516 | INFO     | task id: 38921001
[2024-06-12 03:00:25] 2024-06-12 07:00:07,517 | INFO     | errors: (none)
[2024-06-12 03:00:25] 2024-06-12 07:00:07,517 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-12 03:00:25] 2024-06-12 07:00:07,517 | INFO     | pilot state: finished 
[2024-06-12 03:00:25] 2024-06-12 07:00:07,517 | INFO     | transexitcode: 0
[2024-06-12 03:00:25] 2024-06-12 07:00:07,517 | INFO     | exeerrorcode: 0
[2024-06-12 03:00:25] 2024-06-12 07:00:07,517 | INFO     | exeerrordiag: 
[2024-06-12 03:00:25] 2024-06-12 07:00:07,517 | INFO     | exitcode: 0
[2024-06-12 03:00:25] 2024-06-12 07:00:07,517 | INFO     | exitmsg: OK
[2024-06-12 03:00:25] 2024-06-12 07:00:07,517 | INFO     | cpuconsumptiontime: 145485 s
[2024-06-12 03:00:25] 2024-06-12 07:00:07,517 | INFO     | nevents: 400
[2024-06-12 03:00:25] 2024-06-12 07:00:07,517 | INFO     | neventsw: 0
[2024-06-12 03:00:25] 2024-06-12 07:00:07,517 | INFO     | pid: 284994
[2024-06-12 03:00:25] 2024-06-12 07:00:07,517 | INFO     | pgrp: 284994
[2024-06-12 03:00:25] 2024-06-12 07:00:07,518 | INFO     | corecount: 8
[2024-06-12 03:00:25] 2024-06-12 07:00:07,518 | INFO     | event service: False
[2024-06-12 03:00:25] 2024-06-12 07:00:07,518 | INFO     | sizes: {0: 2393324, 1: 2393523, 12: 2393523, 22: 2393551, 33: 2393579, 39: 2393813, 44: 2393969, 56448: 2444024, 56458: 2452984, 56459: 2453040, 56522: 2453210}
[2024-06-12 03:00:25] 2024-06-12 07:00:07,518 | INFO     | --------------------------------------------------
[2024-06-12 03:00:25] 2024-06-12 07:00:07,518 | INFO     | 
[2024-06-12 03:00:25] 2024-06-12 07:00:07,518 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2024-06-12 03:00:25] 2024-06-12 07:00:07,865 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-12 03:00:25] 2024-06-12 07:00:07,865 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-12 03:00:25] 2024-06-12 07:00:07,865 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-12 03:00:25] 2024-06-12 07:00:07,865 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-12 03:00:25] 2024-06-12 07:00:07,865 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-12 03:00:25] 2024-06-12 07:00:07,865 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-12 03:00:25] 2024-06-12 07:00:07,865 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-12 03:00:25] 2024-06-12 07:00:07,865 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-12 03:00:25] 2024-06-12 07:00:07,865 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-12 03:00:25] 2024-06-12 07:00:07,866 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-12 03:00:25] 2024-06-12 07:00:07,866 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-12 03:00:25] 2024-06-12 07:00:07,866 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-12 03:00:25] 2024-06-12 07:00:07,866 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-12 03:00:25] 2024-06-12 07:00:07,866 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-12 03:00:25] 2024-06-12 07:00:07,866 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-12 03:00:25] 2024-06-12 07:00:07,866 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-12 03:00:25] 2024-06-12 07:00:07,866 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-12 03:00:25] 2024-06-12 07:00:07,866 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-12 03:00:25] 2024-06-12 07:00:07,866 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-12 03:00:25] 2024-06-12 07:00:07,866 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-12 03:00:25] 2024-06-12 07:00:07,867 | INFO     | job 6227184322 has completed (purged errors)
[2024-06-12 03:00:25] 2024-06-12 07:00:07,867 | INFO     | overall cleanup function is called
[2024-06-12 03:00:25] 2024-06-12 07:00:08,886 | INFO     | --- collectZombieJob: --- 10, [284994]
[2024-06-12 03:00:25] 2024-06-12 07:00:08,886 | INFO     | zombie collector waiting for pid 284994
[2024-06-12 03:00:25] 2024-06-12 07:00:08,886 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-12 03:00:25] 2024-06-12 07:00:09,892 | INFO     | collected zombie processes
[2024-06-12 03:00:25] 2024-06-12 07:00:09,892 | INFO     | will now attempt to kill all subprocesses of pid=284994
[2024-06-12 03:00:25] 2024-06-12 07:00:11,160 | INFO     | process IDs to be killed: [284994] (in reverse order)
[2024-06-12 03:00:25] 2024-06-12 07:00:12,233 | WARNING  | found no corresponding commands to process id(s)
[2024-06-12 03:00:25] 2024-06-12 07:00:12,234 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-12 03:00:25] 2024-06-12 07:00:12,287 | INFO     | did not find any defunct processes belonging to 284994
[2024-06-12 03:00:25] 2024-06-12 07:00:12,339 | INFO     | did not find any defunct processes belonging to 284994
[2024-06-12 03:00:25] 2024-06-12 07:00:12,339 | INFO     | ready for new job
[2024-06-12 03:00:25] 2024-06-12 07:00:12,340 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-12 03:00:25] 2024-06-12 07:00:12,389 | INFO     | *************************************
[2024-06-12 03:00:25] 2024-06-12 07:00:12,389 | INFO     | ***  PanDA Pilot version 3.7.6.8  ***
[2024-06-12 03:00:25] 2024-06-12 07:00:12,389 | INFO     | *************************************
[2024-06-12 03:00:25] 2024-06-12 07:00:12,389 | INFO     | 
[2024-06-12 03:00:25] 2024-06-12 07:00:12,440 | INFO     | architecture information:
[2024-06-12 03:00:25] 2024-06-12 07:00:12,465 | INFO     | executing command: cat /etc/os-release
[2024-06-12 03:00:25] 2024-06-12 07:00:12,595 | INFO     | cat /etc/os-release:
[2024-06-12 03:00:25] NAME="CentOS Linux"
[2024-06-12 03:00:25] VERSION="7 (Core)"
[2024-06-12 03:00:25] ID="centos"
[2024-06-12 03:00:25] ID_LIKE="rhel fedora"
[2024-06-12 03:00:25] VERSION_ID="7"
[2024-06-12 03:00:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-12 03:00:25] ANSI_COLOR="0;31"
[2024-06-12 03:00:25] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-12 03:00:25] HOME_URL="https://www.centos.org/"
[2024-06-12 03:00:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-12 03:00:25] 
[2024-06-12 03:00:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-12 03:00:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-12 03:00:25] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-12 03:00:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-12 03:00:25] 
[2024-06-12 03:00:25] 2024-06-12 07:00:12,595 | INFO     | *************************************
[2024-06-12 03:00:25] 2024-06-12 07:00:13,098 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2024-06-12 03:00:25] 2024-06-12 07:00:13,211 | INFO     | sufficient remaining disk space (99233038336 B)
[2024-06-12 03:00:25] 2024-06-12 07:00:13,211 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-12 03:00:25] 2024-06-12 07:00:13,211 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-12 03:00:25] 2024-06-12 07:00:13,212 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-12 03:00:25] 2024-06-12 07:00:13,212 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-12 03:00:25] 2024-06-12 07:00:13,212 | INFO     | aborting loop
[2024-06-12 03:00:25] 2024-06-12 07:00:13,212 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-12 03:00:25] 2024-06-12 07:00:13,212 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-12 03:00:25] 2024-06-12 07:00:13,212 | INFO     | found 0 job(s) in 20 queues
[2024-06-12 03:00:25] 2024-06-12 07:00:13,212 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-12 03:00:25] 2024-06-12 07:00:13,212 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-12 03:00:25] 2024-06-12 07:00:13,431 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-12 03:00:25] 2024-06-12 07:00:13,445 | INFO     | all data control threads have been joined
[2024-06-12 03:00:25] 2024-06-12 07:00:13,553 | INFO     | all payload control threads have been joined
[2024-06-12 03:00:25] 2024-06-12 07:00:13,571 | INFO     | all job control threads have been joined
[2024-06-12 03:00:25] 2024-06-12 07:00:14,216 | INFO     | [job] retrieve thread has finished
[2024-06-12 03:00:25] 2024-06-12 07:00:14,221 | INFO     | [job] job monitor thread has finished
[2024-06-12 03:00:25] 2024-06-12 07:00:14,226 | INFO     | [job] queue monitor thread has finished
[2024-06-12 03:00:25] 2024-06-12 07:00:14,283 | INFO     | [payload] failed_post thread has finished
[2024-06-12 03:00:25] 2024-06-12 07:00:14,383 | INFO     | [job] validate thread has finished
[2024-06-12 03:00:25] 2024-06-12 07:00:14,387 | INFO     | [payload] validate_pre thread has finished
[2024-06-12 03:00:25] 2024-06-12 07:00:14,465 | INFO     | [data] control thread has finished
[2024-06-12 03:00:25] 2024-06-12 07:00:14,496 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-12 03:00:25] 2024-06-12 07:00:14,559 | INFO     | [payload] control thread has finished
[2024-06-12 03:00:25] 2024-06-12 07:00:14,577 | INFO     | [job] control thread has finished
[2024-06-12 03:00:25] 2024-06-12 07:00:14,905 | INFO     | [job] create_data_payload thread has finished
[2024-06-12 03:00:25] 2024-06-12 07:00:14,943 | INFO     | [payload] execute_payloads thread has finished
[2024-06-12 03:00:25] 2024-06-12 07:00:15,217 | INFO     | [data] copytool_out thread has finished
[2024-06-12 03:00:25] 2024-06-12 07:00:15,273 | INFO     | [data] copytool_in thread has finished
[2024-06-12 03:00:25] 2024-06-12 07:00:15,546 | INFO     | [payload] validate_post thread has finished
[2024-06-12 03:00:25] 2024-06-12 07:00:17,439 | INFO     | [data] queue_monitor thread has finished
[2024-06-12 03:00:25] 2024-06-12 07:00:17,731 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140420239181632)>', '<ExcThread(monitor, started 140419501377280)>']
[2024-06-12 03:00:25] 2024-06-12 07:00:18,254 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-12 03:00:25] 2024-06-12 07:00:18,254 | INFO     | [monitor] control thread has ended
[2024-06-12 03:00:25] 2024-06-12 07:00:22,757 | INFO     | all workflow threads have been joined
[2024-06-12 03:00:25] 2024-06-12 07:00:22,757 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-12 03:00:25] 2024-06-12 07:00:22,758 | INFO     | traces error code: 0
[2024-06-12 03:00:25] 2024-06-12 07:00:22,758 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-12 03:00:25] 2024-06-12 07:00:23,660 [wrapper] ==== pilot stdout END ====
[2024-06-12 03:00:25] 2024-06-12 07:00:23,712 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-12 03:00:25] 2024-06-12 07:00:23,740 [wrapper] pilotpid: 245780
[2024-06-12 03:00:25] 2024-06-12 07:00:23,774 [wrapper] Pilot exit status: 0
[2024-06-12 03:00:25] 2024-06-12 07:00:23,945 [wrapper] pandaids: 6227184322
[2024-06-12 03:00:25] 2024-06-12 07:00:24,403 [wrapper] cleanup supervisor_pilot 163783 245781
[2024-06-12 03:00:25] 2024-06-12 07:00:24,456 [wrapper] Test setup, not cleaning
[2024-06-12 03:00:25] 2024-06-12 07:00:24,481 [wrapper] ==== wrapper stdout END ====
[2024-06-12 03:00:25] 2024-06-12 07:00:24,508 [wrapper] ==== wrapper stderr END ====
[2024-06-12 03:00:25] 2024-06-12 07:00:24,564 [wrapper] apfmon messages muted
[2024-06-12 03:00:25]  *** Error codes and diagnostics ***
[2024-06-12 03:00:25]     "exeErrorCode": 0,
[2024-06-12 03:00:25]     "exeErrorDiag": "",
[2024-06-12 03:00:25]     "pilotErrorCode": 0,
[2024-06-12 03:00:25]     "pilotErrorDiag": "",
[2024-06-12 03:00:25]  *** Listing of results directory ***
[2024-06-12 03:00:25] total 971996
[2024-06-12 03:00:25] -rw-r--r-- 1 boincer umatlas    469443 Jun 11 05:29 pilot3.tar.gz
[2024-06-12 03:00:25] -rw-r--r-- 1 boincer umatlas      5654 Jun 11 05:57 queuedata.json
[2024-06-12 03:00:25] -rwx------ 1 boincer umatlas     32308 Jun 11 06:01 runpilot2-wrapper.sh
[2024-06-12 03:00:25] -rw-r--r-- 1 boincer umatlas       100 Jun 11 11:14 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-12 03:00:25] -rwxr-xr-x 1 boincer umatlas      7986 Jun 11 11:14 run_atlas
[2024-06-12 03:00:25] -rw-r--r-- 1 boincer umatlas       105 Jun 11 11:14 job.xml
[2024-06-12 03:00:25] -rw-r--r-- 2 boincer umatlas 612009268 Jun 11 11:15 EVNT.38776190._000647.pool.root.1
[2024-06-12 03:00:25] -rw-r--r-- 2 boincer umatlas     17537 Jun 11 11:15 start_atlas.sh
[2024-06-12 03:00:25] drwxrwx--x 2 boincer umatlas      4096 Jun 11 11:15 shared
[2024-06-12 03:00:25] -rw-r--r-- 2 boincer umatlas    482061 Jun 11 11:15 input.tar.gz
[2024-06-12 03:00:25] -rw-r--r-- 1 boincer umatlas         0 Jun 11 11:15 boinc_lockfile
[2024-06-12 03:00:25] -rw-r--r-- 1 boincer umatlas      2655 Jun 11 11:15 pandaJob.out
[2024-06-12 03:00:25] -rw------- 1 boincer umatlas       424 Jun 11 11:15 setup.sh.local
[2024-06-12 03:00:25] -rw------- 1 boincer umatlas   1020474 Jun 11 11:16 agis_schedconf.cvmfs.json
[2024-06-12 03:00:25] -rw------- 1 boincer umatlas   1324173 Jun 11 11:16 cric_ddmendpoints.json
[2024-06-12 03:00:25] drwx------ 4 boincer umatlas      4096 Jun 11 11:16 pilot3
[2024-06-12 03:00:25] -rw------- 1 boincer umatlas 362961235 Jun 12 02:55 HITS.38921001._052507.pool.root.1
[2024-06-12 03:00:25] -rw-r--r-- 1 boincer umatlas       533 Jun 12 02:55 boinc_task_state.xml
[2024-06-12 03:00:25] -rw-r--r-- 1 boincer umatlas      6300 Jun 12 02:56 init_data.xml
[2024-06-12 03:00:25] -rw------- 1 boincer umatlas      1068 Jun 12 02:58 memory_monitor_summary.json
[2024-06-12 03:00:25] -rw------- 1 boincer umatlas         0 Jun 12 02:58 agis_ddmendpoints.agis.ALL.json
[2024-06-12 03:00:25] -rw------- 1 boincer umatlas    916632 Jun 12 02:59 log.38921001._052507.job.log.tgz.1
[2024-06-12 03:00:25] -rw------- 1 boincer umatlas      7794 Jun 12 03:00 heartbeat.json
[2024-06-12 03:00:25] -rw------- 1 boincer umatlas        95 Jun 12 03:00 pilot_heartbeat.json
[2024-06-12 03:00:25] -rw-r--r-- 1 boincer umatlas      8192 Jun 12 03:00 boinc_mmap_file
[2024-06-12 03:00:25] -rw-r--r-- 1 boincer umatlas        29 Jun 12 03:00 wrapper_checkpoint.txt
[2024-06-12 03:00:25] -rw------- 1 boincer umatlas      4334 Jun 12 03:00 pilotlog.txt
[2024-06-12 03:00:25] -rw------- 1 boincer umatlas   7488280 Jun 12 03:00 log.38921001._052507.job.log.1
[2024-06-12 03:00:25] -rw------- 1 boincer umatlas       357 Jun 12 03:00 output.list
[2024-06-12 03:00:25] -rw-r--r-- 1 boincer umatlas       620 Jun 12 03:00 runtime_log
[2024-06-12 03:00:25] -rw------- 1 boincer umatlas   8427520 Jun 12 03:00 result.tar.gz
[2024-06-12 03:00:25] -rw-r--r-- 1 boincer umatlas     11010 Jun 12 03:00 runtime_log.err
[2024-06-12 03:00:25] -rw------- 1 boincer umatlas       655 Jun 12 03:00 NK3MDmdUDb5n7Olcko1bjSoqABFKDmABFKDmOtvXDm7fnKDmuGbSwn.diag
[2024-06-12 03:00:25] -rw-r--r-- 1 boincer umatlas     21663 Jun 12 03:00 stderr.txt
[2024-06-12 03:00:26] HITS file was successfully produced:
[2024-06-12 03:00:26] -rw------- 1 boincer umatlas 362961235 Jun 12 02:55 shared/HITS.pool.root.1
[2024-06-12 03:00:26]  *** Contents of shared directory: ***
[2024-06-12 03:00:26] total 960856
[2024-06-12 03:00:26] -rw-r--r-- 2 boincer umatlas 612009268 Jun 11 11:15 ATLAS.root_0
[2024-06-12 03:00:26] -rw-r--r-- 2 boincer umatlas     17537 Jun 11 11:15 start_atlas.sh
[2024-06-12 03:00:26] -rw-r--r-- 2 boincer umatlas    482061 Jun 11 11:15 input.tar.gz
[2024-06-12 03:00:26] -rw------- 1 boincer umatlas 362961235 Jun 12 02:55 HITS.pool.root.1
[2024-06-12 03:00:26] -rw------- 1 boincer umatlas   8427520 Jun 12 03:00 result.tar.gz
03:00:27 (229709): run_atlas exited; CPU time 144617.549887
03:00:27 (229709): called boinc_finish(0)

</stderr_txt>
]]>

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