Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2024-06-11 15:47:12 (15588): Detected: vboxwrapper 26206
2024-06-11 15:47:12 (15588): Detected: BOINC client v8.0.2
2024-06-11 15:47:14 (15588): Detected: VirtualBox VboxManage Interface (Version: 7.0.14)
2024-06-11 15:47:14 (15588): Successfully copied 'init_data.xml' to the shared directory.
2024-06-11 15:47:14 (15588): Create VM. (boinc_79771939e4ecf762, slot#10)
2024-06-11 15:47:15 (15588): Setting Memory Size for VM. (4800MB)
2024-06-11 15:47:15 (15588): Setting CPU Count for VM. (8)
2024-06-11 15:47:15 (15588): Setting Chipset Options for VM.
2024-06-11 15:47:16 (15588): Setting Graphics Controller Options for VM.
2024-06-11 15:47:16 (15588): Setting Boot Options for VM.
2024-06-11 15:47:16 (15588): Setting Network Configuration for NAT.
2024-06-11 15:47:16 (15588): Enabling VM Network Access.
2024-06-11 15:47:17 (15588): Disabling USB Support for VM.
2024-06-11 15:47:17 (15588): Disabling COM Port Support for VM.
2024-06-11 15:47:17 (15588): Disabling LPT Port Support for VM.
2024-06-11 15:47:17 (15588): Disabling Audio Support for VM.
2024-06-11 15:47:18 (15588): Disabling Clipboard Support for VM.
2024-06-11 15:47:18 (15588): Disabling Drag and Drop Support for VM.
2024-06-11 15:47:18 (15588): Adding storage controller(s) to VM.
2024-06-11 15:47:19 (15588): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-06-11 15:47:21 (15588): Adding VirtualBox Guest Additions to VM.
2024-06-11 15:47:22 (15588): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-06-11 15:47:22 (15588): forwarding host port 51405 to guest port 80
2024-06-11 15:47:22 (15588): Enabling remote desktop for VM.
2024-06-11 15:47:23 (15588): Enabling shared directory for VM.
2024-06-11 15:47:24 (15588): Starting VM using VBoxManage interface. (boinc_79771939e4ecf762, slot#10)
2024-06-11 15:47:29 (15588): Successfully started VM. (PID = '10880')
2024-06-11 15:47:29 (15588): Reporting VM Process ID to BOINC.
2024-06-11 15:47:29 (15588): Guest Log: BIOS: VirtualBox 7.0.14
2024-06-11 15:47:29 (15588): Guest Log: CPUID EDX: 0x178bfbff
2024-06-11 15:47:29 (15588): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-06-11 15:47:29 (15588): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-06-11 15:47:29 (15588): VM state change detected. (old = 'poweredoff', new = 'running')
2024-06-11 15:47:29 (15588): Detected: Web Application Enabled (http://localhost:51405)
2024-06-11 15:47:29 (15588): Detected: Remote Desktop Enabled (localhost:51406)
2024-06-11 15:47:29 (15588): Preference change detected
2024-06-11 15:47:29 (15588): Setting CPU throttle for VM. (100%)
2024-06-11 15:47:30 (15588): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2024-06-11 15:47:31 (15588): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-06-11 15:47:31 (15588): Guest Log: BIOS: Booting from Hard Disk...
2024-06-11 15:47:34 (15588): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-06-11 15:47:34 (15588): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-06-11 15:47:34 (15588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-06-11 15:47:34 (15588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-06-11 15:47:34 (15588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-06-11 15:47:34 (15588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-06-11 15:47:34 (15588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-06-11 15:47:34 (15588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-06-11 15:47:34 (15588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-06-11 15:47:34 (15588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-06-11 15:47:34 (15588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-06-11 15:47:34 (15588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-06-11 15:47:34 (15588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-06-11 15:47:34 (15588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-06-11 15:47:34 (15588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-06-11 15:47:34 (15588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-06-11 15:47:34 (15588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-06-11 15:47:34 (15588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-06-11 15:47:34 (15588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-06-11 15:47:34 (15588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-06-11 15:47:34 (15588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-06-11 15:47:34 (15588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-06-11 15:47:34 (15588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-06-11 15:47:34 (15588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-06-11 15:47:34 (15588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-06-11 15:47:34 (15588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-06-11 15:47:34 (15588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-06-11 15:47:34 (15588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-06-11 15:47:34 (15588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-06-11 15:47:34 (15588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-06-11 15:47:34 (15588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-06-11 15:47:34 (15588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-06-11 15:47:40 (15588): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-06-11 15:47:40 (15588): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-06-11 15:47:45 (15588): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-06-11 15:47:45 (15588): Guest Log: 00:00:00.000166 main     Log opened 2024-06-11T15:47:43.438542000Z
2024-06-11 15:47:45 (15588): Guest Log: 00:00:00.000263 main     OS Product: Linux
2024-06-11 15:47:45 (15588): Guest Log: 00:00:00.000295 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-06-11 15:47:45 (15588): Guest Log: 00:00:00.000316 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-06-11 15:47:45 (15588): Guest Log: 00:00:00.000336 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-06-11 15:47:45 (15588): Guest Log: 00:00:00.000337 main     Process ID: 1367
2024-06-11 15:47:45 (15588): Guest Log: 00:00:00.000337 main     Package type: LINUX_64BITS_GENERIC
2024-06-11 15:47:45 (15588): Guest Log: 00:00:00.001472 main     5.2.32 r132073 started. Verbose level = 0
2024-06-11 15:47:45 (15588): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-06-11 15:47:45 (15588): Guest Log: [INFO] Mounting shared directory
2024-06-11 15:47:45 (15588): Guest Log: [INFO] Checking for init_data.xml
2024-06-11 15:47:49 (15588): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-06-11 15:47:49 (15588): Guest Log: [INFO] Detected branch: prod
2024-06-11 15:47:50 (15588): Guest Log: This is the prod version of the ATLAS job wrapper
2024-06-11 15:47:50 (15588): Guest Log: Copying input files
2024-06-11 15:47:54 (15588): Guest Log: Copied input files into RunAtlas.
2024-06-11 15:47:54 (15588): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-06-11 15:47:54 (15588): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-06-11 15:47:54 (15588): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-06-11 15:47:54 (15588): Guest Log: Further information can be found at the LHC@home message board.
2024-06-11 15:47:55 (15588): Guest Log: 00:00:10.024105 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 187 599 667 000ns (GuestNow=1 718 113 675 842 875 000 ns GuestLast=1 718 120 863 442 542 000 ns fSetTimeLastLoop=true )
2024-06-11 15:48:02 (15588): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-06-11 15:48:02 (15588): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-06-11 15:48:02 (15588): Guest Log: 2.6.3.0 1644 0 32204 133752 4 1 3117205 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2024-06-11 15:48:03 (15588): Guest Log: copied the webapp to /var/www
2024-06-11 15:48:03 (15588): Guest Log: ATHENA_PROC_NUMBER=8
2024-06-11 15:48:03 (15588): Guest Log: ATHENA_CORE_NUMBER=8
2024-06-11 15:48:03 (15588): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-06-11 15:48:03 (15588): Guest Log:  *** Starting ATLAS job. (PandaID=6227118178 taskID=38920982) ***
2024-06-11 17:29:01 (15588): Status Report: Elapsed Time: '6000.000000'
2024-06-11 17:29:01 (15588): Status Report: CPU Time: '38947.203125'
2024-06-11 18:32:52 (15588): Guest Log:  *** Job finished ***
2024-06-11 18:32:52 (15588): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-06-11 18:32:52 (15588): Guest Log: 2024-06-11 16:32:38,173 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
2024-06-11 18:32:52 (15588): Guest Log: 2024-06-11 16:32:39,178 | INFO     | [job] queue monitor thread has finished
2024-06-11 18:32:52 (15588): Guest Log: 2024-06-11 16:32:40,971 | INFO     | [data] queue_monitor thread has finished
2024-06-11 18:32:52 (15588): Guest Log: 2024-06-11 16:32:41,540 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139939750639424)>', '<ExcThread(monitor, started 139938800584448)>']
2024-06-11 18:32:52 (15588): Guest Log: 2024-06-11 16:32:41,745 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-06-11 18:32:52 (15588): Guest Log: 2024-06-11 16:32:41,746 | INFO     | [monitor] control thread has ended
2024-06-11 18:32:52 (15588): Guest Log: 2024-06-11 16:32:46,554 | INFO     | all workflow threads have been joined
2024-06-11 18:32:52 (15588): Guest Log: 2024-06-11 16:32:46,555 | INFO     | end of generic workflow (traces error code: 0)
2024-06-11 18:32:52 (15588): Guest Log: 2024-06-11 16:32:46,555 | INFO     | traces error code: 0
2024-06-11 18:32:52 (15588): Guest Log: 2024-06-11 16:32:46,555 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-06-11 18:32:52 (15588): Guest Log: 2024-06-11 16:32:46,644 [wrapper] ==== pilot stdout END ====
2024-06-11 18:32:52 (15588): Guest Log: 2024-06-11 16:32:46,650 [wrapper] ==== wrapper stdout RESUME ====
2024-06-11 18:32:52 (15588): Guest Log: 2024-06-11 16:32:46,657 [wrapper] pilotpid: 6568
2024-06-11 18:32:52 (15588): Guest Log: 2024-06-11 16:32:46,664 [wrapper] Pilot exit status: 0
2024-06-11 18:32:52 (15588): Guest Log: 2024-06-11 16:32:46,771 [wrapper] pandaids: 6227118178
2024-06-11 18:32:52 (15588): Guest Log: 2024-06-11 16:32:46,811 [wrapper] cleanup supervisor_pilot  7796 6569
2024-06-11 18:32:52 (15588): Guest Log: 2024-06-11 16:32:46,818 [wrapper] Test setup, not cleaning
2024-06-11 18:32:52 (15588): Guest Log: 2024-06-11 16:32:46,825 [wrapper] ==== wrapper stdout END ====
2024-06-11 18:32:52 (15588): Guest Log: 2024-06-11 16:32:46,832 [wrapper] ==== wrapper stderr END ====
2024-06-11 18:32:52 (15588): Guest Log: 2024-06-11 16:32:46,849 [wrapper] apfmon messages muted
2024-06-11 18:32:52 (15588): Guest Log:  *** Error codes and diagnostics ***
2024-06-11 18:32:52 (15588): Guest Log:     "exeErrorCode": 0,
2024-06-11 18:32:52 (15588): Guest Log:     "exeErrorDiag": "",
2024-06-11 18:32:52 (15588): Guest Log:     "pilotErrorCode": 0,
2024-06-11 18:32:52 (15588): Guest Log:     "pilotErrorDiag": "",
2024-06-11 18:32:52 (15588): Guest Log:  *** Listing of results directory ***
2024-06-11 18:32:52 (15588): Guest Log: total 313148
2024-06-11 18:32:52 (15588): Guest Log: -rw-r--r--. 1 atlas atlas    469443 Jun 11 09:20 pilot3.tar.gz
2024-06-11 18:32:52 (15588): Guest Log: -rw-r--r--. 1 atlas atlas      5654 Jun 11 09:24 queuedata.json
2024-06-11 18:32:52 (15588): Guest Log: -rwx------. 1 atlas atlas     32308 Jun 11 09:24 runpilot2-wrapper.sh
2024-06-11 18:32:52 (15588): Guest Log: -rwxr-xr-x. 1 atlas atlas     17537 Jun 11 13:47 start_atlas.sh
2024-06-11 18:32:52 (15588): Guest Log: -rwxr-xr-x. 1 atlas atlas    482031 Jun 11 13:47 input.tar.gz
2024-06-11 18:32:52 (15588): Guest Log: -rwxr-xr-x. 1 atlas atlas      8974 Jun 11 13:47 init_data.xml
2024-06-11 18:32:52 (15588): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun 11 13:47 EVNT.38776160._000934.pool.root.1 -> /data/./ATLAS.root_0
2024-06-11 18:32:52 (15588): Guest Log: -rw-r--r--. 1 atlas atlas      2628 Jun 11 13:48 pandaJob.out
2024-06-11 18:32:52 (15588): Guest Log: -rw-------. 1 atlas atlas       424 Jun 11 13:48 setup.sh.local
2024-06-11 18:32:52 (15588): Guest Log: -rw-------. 1 atlas atlas   1014402 Jun 11 13:48 agis_schedconf.cvmfs.json
2024-06-11 18:32:52 (15588): Guest Log: -rw-------. 1 atlas atlas         0 Jun 11 13:48 agis_ddmendpoints.agis.ALL.json
2024-06-11 18:32:52 (15588): Guest Log: -rw-------. 1 atlas atlas   1324173 Jun 11 13:48 cric_ddmendpoints.json
2024-06-11 18:32:52 (15588): Guest Log: drwx------. 4 atlas atlas      4096 Jun 11 13:48 pilot3
2024-06-11 18:32:52 (15588): Guest Log: -rw-------. 1 atlas atlas 315248909 Jun 11 16:31 HITS.38920982._069737.pool.root.1
2024-06-11 18:32:52 (15588): Guest Log: -rw-------. 1 atlas atlas      1027 Jun 11 16:32 memory_monitor_summary.json
2024-06-11 18:32:52 (15588): Guest Log: -rw-------. 1 atlas atlas    345486 Jun 11 16:32 log.38920982._069737.job.log.tgz.1
2024-06-11 18:32:52 (15588): Guest Log: -rw-------. 1 atlas atlas        95 Jun 11 16:32 pilot_heartbeat.json
2024-06-11 18:32:52 (15588): Guest Log: -rw-------. 1 atlas atlas      7709 Jun 11 16:32 heartbeat.json
2024-06-11 18:32:52 (15588): Guest Log: -rw-------. 1 atlas atlas      4394 Jun 11 16:32 pilotlog.txt
2024-06-11 18:32:52 (15588): Guest Log: -rw-------. 1 atlas atlas    630890 Jun 11 16:32 log.38920982._069737.job.log.1
2024-06-11 18:32:52 (15588): Guest Log: -rw-------. 1 atlas atlas       357 Jun 11 16:32 output.list
2024-06-11 18:32:52 (15588): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun 11 16:32 runtime_log
2024-06-11 18:32:52 (15588): Guest Log: -rw-------. 1 atlas atlas    993280 Jun 11 16:32 result.tar.gz
2024-06-11 18:32:52 (15588): Guest Log: -rw-r--r--. 1 atlas atlas     10936 Jun 11 16:32 runtime_log.err
2024-06-11 18:32:52 (15588): Guest Log: -rw-------. 1 atlas atlas       645 Jun 11 16:32 Bo7MDm7uCb5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmpdaKDm5lOM1n.diag
2024-06-11 18:32:52 (15588): Guest Log: Looking for outputfile HITS.38920982._069737.pool.root.1
2024-06-11 18:32:52 (15588): Guest Log: HITS file was successfully produced
2024-06-11 18:32:52 (15588): Guest Log: -rw-------. 1 atlas atlas 315248909 Jun 11 16:31 /home/atlas/RunAtlas/HITS.38920982._069737.pool.root.1
2024-06-11 18:32:54 (15588): Guest Log: Successfully finished the ATLAS job!
2024-06-11 18:32:54 (15588): Guest Log: Copying the results back to the shared directory!
2024-06-11 18:32:54 (15588): Guest Log:  *** Contents of shared directory: ***
2024-06-11 18:32:54 (15588): Guest Log: total 928952
2024-06-11 18:32:54 (15588): Guest Log: -rwxrwxrwx. 1 root root 634482422 Jun 11 13:47 ATLAS.root_0
2024-06-11 18:32:54 (15588): Guest Log: -rwxrwxrwx. 1 root root 315248909 Jun 11  2024 HITS.pool.root.1
2024-06-11 18:32:54 (15588): Guest Log: -rwxrwxrwx. 1 root root      8974 Jun 11 13:47 init_data.xml
2024-06-11 18:32:54 (15588): Guest Log: -rwxrwxrwx. 1 root root    482031 Jun 11 13:46 input.tar.gz
2024-06-11 18:32:54 (15588): Guest Log: -rwxrwxrwx. 1 root root    993280 Jun 11  2024 result.tar.gz
2024-06-11 18:32:54 (15588): Guest Log: -rwxrwxrwx. 1 root root     17537 Jun 11 13:46 start_atlas.sh
2024-06-11 18:32:54 (15588): Guest Log:  *** Success! Shutting down the machine. ***
2024-06-11 18:32:54 (15588): VM Completion File Detected.
2024-06-11 18:32:54 (15588): Powering off VM.
2024-06-11 18:32:55 (15588): Successfully stopped VM.
2024-06-11 18:32:55 (15588): Deregistering VM. (boinc_79771939e4ecf762, slot#10)
2024-06-11 18:32:55 (15588): Removing network bandwidth throttle group from VM.
2024-06-11 18:32:55 (15588): Removing VM from VirtualBox.
18:33:00 (15588): called boinc_finish(0)

</stderr_txt>
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