Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2024-06-12 07:26:04 (450029): Detected: vboxwrapper 26206
2024-06-12 07:26:04 (450029): Detected: BOINC client v7.24.1
2024-06-12 07:26:05 (450029): Detected: VirtualBox VboxManage Interface (Version: 7.0.18)
2024-06-12 07:26:05 (450029): Successfully copied 'init_data.xml' to the shared directory.
2024-06-12 07:26:05 (450029): Create VM. (boinc_27477859d7362517, slot#0)
2024-06-12 07:26:05 (450029): Setting Memory Size for VM. (4600MB)
2024-06-12 07:26:05 (450029): Setting CPU Count for VM. (6)
2024-06-12 07:26:05 (450029): Setting Chipset Options for VM.
2024-06-12 07:26:05 (450029): Setting Graphics Controller Options for VM.
2024-06-12 07:26:06 (450029): Setting Boot Options for VM.
2024-06-12 07:26:06 (450029): Setting Network Configuration for NAT.
2024-06-12 07:26:06 (450029): Enabling VM Network Access.
2024-06-12 07:26:06 (450029): Disabling USB Support for VM.
2024-06-12 07:26:06 (450029): Disabling COM Port Support for VM.
2024-06-12 07:26:06 (450029): Disabling LPT Port Support for VM.
2024-06-12 07:26:07 (450029): Disabling Audio Support for VM.
2024-06-12 07:26:07 (450029): Disabling Clipboard Support for VM.
2024-06-12 07:26:07 (450029): Disabling Drag and Drop Support for VM.
2024-06-12 07:26:07 (450029): Adding storage controller(s) to VM.
2024-06-12 07:26:07 (450029): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-06-12 07:26:09 (450029): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-06-12 07:26:09 (450029): forwarding host port 32979 to guest port 80
2024-06-12 07:26:10 (450029): Enabling remote desktop for VM.
2024-06-12 07:26:10 (450029): Required extension pack not installed, remote desktop not enabled.
2024-06-12 07:26:10 (450029): Enabling shared directory for VM.
2024-06-12 07:26:10 (450029): Starting VM using VBoxManage interface. (boinc_27477859d7362517, slot#0)
2024-06-12 07:26:11 (450029): Successfully started VM. (PID = '450285')
2024-06-12 07:26:11 (450029): Reporting VM Process ID to BOINC.
2024-06-12 07:26:11 (450029): Guest Log: BIOS: VirtualBox 7.0.18
2024-06-12 07:26:11 (450029): Guest Log: CPUID EDX: 0x178bfbff
2024-06-12 07:26:11 (450029): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-06-12 07:26:11 (450029): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-06-12 07:26:11 (450029): VM state change detected. (old = 'poweredoff', new = 'running')
2024-06-12 07:26:11 (450029): Detected: Web Application Enabled (http://localhost:32979)
2024-06-12 07:26:11 (450029): Preference change detected
2024-06-12 07:26:11 (450029): Setting CPU throttle for VM. (50%)
2024-06-12 07:26:11 (450029): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2024-06-12 07:26:13 (450029): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-06-12 07:26:13 (450029): Guest Log: BIOS: Booting from Hard Disk...
2024-06-12 07:26:19 (450029): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-06-12 07:26:19 (450029): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-06-12 07:26:19 (450029): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-06-12 07:26:19 (450029): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-06-12 07:26:19 (450029): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-06-12 07:26:19 (450029): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-06-12 07:26:19 (450029): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-06-12 07:26:19 (450029): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-06-12 07:26:19 (450029): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-06-12 07:26:19 (450029): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-06-12 07:26:19 (450029): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-06-12 07:26:19 (450029): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-06-12 07:26:19 (450029): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-06-12 07:26:19 (450029): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-06-12 07:26:19 (450029): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-06-12 07:26:19 (450029): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-06-12 07:26:19 (450029): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-06-12 07:26:19 (450029): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-06-12 07:26:19 (450029): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-06-12 07:26:19 (450029): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-06-12 07:26:19 (450029): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-06-12 07:26:19 (450029): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-06-12 07:26:19 (450029): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-06-12 07:26:19 (450029): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-06-12 07:26:19 (450029): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-06-12 07:26:19 (450029): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-06-12 07:26:19 (450029): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-06-12 07:26:19 (450029): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-06-12 07:26:19 (450029): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-06-12 07:26:19 (450029): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-06-12 07:26:19 (450029): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-06-12 07:26:19 (450029): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-06-12 07:26:29 (450029): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-06-12 07:26:29 (450029): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-06-12 07:26:47 (450029): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-06-12 07:26:47 (450029): Guest Log: 00:00:00.000183 main     Log opened 2024-06-12T05:26:44.967739000Z
2024-06-12 07:26:47 (450029): Guest Log: 00:00:00.000305 main     OS Product: Linux
2024-06-12 07:26:47 (450029): Guest Log: 00:00:00.000343 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-06-12 07:26:47 (450029): Guest Log: 00:00:00.000374 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-06-12 07:26:47 (450029): Guest Log: 00:00:00.000404 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-06-12 07:26:47 (450029): Guest Log: 00:00:00.000405 main     Process ID: 1327
2024-06-12 07:26:47 (450029): Guest Log: 00:00:00.000406 main     Package type: LINUX_64BITS_GENERIC
2024-06-12 07:26:47 (450029): Guest Log: 00:00:00.001665 main     5.2.32 r132073 started. Verbose level = 0
2024-06-12 07:26:48 (450029): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-06-12 07:26:48 (450029): Guest Log: [INFO] Mounting shared directory
2024-06-12 07:26:48 (450029): Guest Log: [INFO] Checking for init_data.xml
2024-06-12 07:26:52 (450029): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-06-12 07:26:52 (450029): Guest Log: [INFO] Detected branch: prod
2024-06-12 07:26:52 (450029): Guest Log: This is the prod version of the ATLAS job wrapper
2024-06-12 07:26:52 (450029): Guest Log: Copying input files
2024-06-12 07:27:01 (450029): Guest Log: Copied input files into RunAtlas.
2024-06-12 07:27:01 (450029): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-06-12 07:27:01 (450029): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-06-12 07:27:01 (450029): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-06-12 07:27:01 (450029): Guest Log: Further information can be found at the LHC@home message board.
2024-06-12 07:27:11 (450029): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-06-12 07:27:11 (450029): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-06-12 07:27:11 (450029): Guest Log: 2.6.3.0 1604 0 32204 133777 4 1 3117205 4096000 0 65024 0 0 n/a 1 17 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
2024-06-12 07:27:15 (450029): Guest Log: copied the webapp to /var/www
2024-06-12 07:27:15 (450029): Guest Log: ATHENA_PROC_NUMBER=6
2024-06-12 07:27:15 (450029): Guest Log: ATHENA_CORE_NUMBER=6
2024-06-12 07:27:15 (450029): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-06-12 07:27:15 (450029): Guest Log:  *** Starting ATLAS job. (PandaID=6226541865 taskID=38921007) ***
2024-06-12 09:05:12 (450029): Status Report: Elapsed Time: '6000.000000'
2024-06-12 09:05:12 (450029): Status Report: CPU Time: '15050.270000'
2024-06-12 10:44:12 (450029): Status Report: Elapsed Time: '12000.000000'
2024-06-12 10:44:12 (450029): Status Report: CPU Time: '34391.620000'
2024-06-12 12:23:13 (450029): Status Report: Elapsed Time: '18000.000000'
2024-06-12 12:23:13 (450029): Status Report: CPU Time: '53784.930000'
2024-06-12 14:02:13 (450029): Status Report: Elapsed Time: '24000.000000'
2024-06-12 14:02:13 (450029): Status Report: CPU Time: '73115.880000'
2024-06-12 15:41:14 (450029): Status Report: Elapsed Time: '30000.000000'
2024-06-12 15:41:14 (450029): Status Report: CPU Time: '92503.800000'
2024-06-12 17:20:14 (450029): Status Report: Elapsed Time: '36000.000000'
2024-06-12 17:20:14 (450029): Status Report: CPU Time: '111850.010000'
2024-06-12 18:52:50 (450029): Guest Log:  *** Job finished ***
2024-06-12 18:52:50 (450029): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-06-12 18:52:50 (450029): Guest Log: 2024-06-12 16:52:35,897 | INFO     | [data] queue_monitor thread has finished
2024-06-12 18:52:50 (450029): Guest Log: 2024-06-12 16:52:40,636 | INFO     | job.realtimelogging is not enabled
2024-06-12 18:52:50 (450029): Guest Log: 2024-06-12 16:52:41,641 | INFO     | [payload] run_realtimelog thread has finished
2024-06-12 18:52:50 (450029): Guest Log: 2024-06-12 16:52:41,769 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139836643866432)>', '<ExcThread(monitor, started 139835478112000)>']
2024-06-12 18:52:50 (450029): Guest Log: 2024-06-12 16:52:42,174 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-06-12 18:52:50 (450029): Guest Log: 2024-06-12 16:52:42,175 | INFO     | [monitor] control thread has ended
2024-06-12 18:52:50 (450029): Guest Log: 2024-06-12 16:52:46,776 | INFO     | all workflow threads have been joined
2024-06-12 18:52:50 (450029): Guest Log: 2024-06-12 16:52:46,777 | INFO     | end of generic workflow (traces error code: 0)
2024-06-12 18:52:50 (450029): Guest Log: 2024-06-12 16:52:46,777 | INFO     | traces error code: 0
2024-06-12 18:52:50 (450029): Guest Log: 2024-06-12 16:52:46,778 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-06-12 18:52:50 (450029): Guest Log: 2024-06-12 16:52:47,134 [wrapper] ==== pilot stdout END ====
2024-06-12 18:52:50 (450029): Guest Log: 2024-06-12 16:52:47,156 [wrapper] ==== wrapper stdout RESUME ====
2024-06-12 18:52:50 (450029): Guest Log: 2024-06-12 16:52:47,177 [wrapper] pilotpid: 6502
2024-06-12 18:52:50 (450029): Guest Log: 2024-06-12 16:52:47,187 [wrapper] Pilot exit status: 0
2024-06-12 18:52:50 (450029): Guest Log: 2024-06-12 16:52:47,231 [wrapper] pandaids: 6226541865
2024-06-12 18:52:50 (450029): Guest Log: 2024-06-12 16:52:47,266 [wrapper] cleanup supervisor_pilot 14378 6503
2024-06-12 18:52:50 (450029): Guest Log: 2024-06-12 16:52:47,273 [wrapper] Test setup, not cleaning
2024-06-12 18:52:50 (450029): Guest Log: 2024-06-12 16:52:47,278 [wrapper] ==== wrapper stdout END ====
2024-06-12 18:52:50 (450029): Guest Log: 2024-06-12 16:52:47,283 [wrapper] ==== wrapper stderr END ====
2024-06-12 18:52:50 (450029): Guest Log: 2024-06-12 16:52:47,294 [wrapper] apfmon messages muted
2024-06-12 18:52:50 (450029): Guest Log:  *** Error codes and diagnostics ***
2024-06-12 18:52:50 (450029): Guest Log:     "exeErrorCode": 0,
2024-06-12 18:52:50 (450029): Guest Log:     "exeErrorDiag": "",
2024-06-12 18:52:50 (450029): Guest Log:     "pilotErrorCode": 0,
2024-06-12 18:52:50 (450029): Guest Log:     "pilotErrorDiag": "",
2024-06-12 18:52:50 (450029): Guest Log:  *** Listing of results directory ***
2024-06-12 18:52:50 (450029): Guest Log: total 352136
2024-06-12 18:52:50 (450029): Guest Log: -rw-r--r--. 1 atlas atlas    469443 Jun 11 03:20 pilot3.tar.gz
2024-06-12 18:52:50 (450029): Guest Log: -rw-r--r--. 1 atlas atlas      5654 Jun 11 03:31 queuedata.json
2024-06-12 18:52:50 (450029): Guest Log: -rwx------. 1 atlas atlas     32308 Jun 11 03:32 runpilot2-wrapper.sh
2024-06-12 18:52:50 (450029): Guest Log: -rw-r--r--. 1 atlas atlas      6648 Jun 12 05:26 init_data.xml
2024-06-12 18:52:50 (450029): Guest Log: -rw-r--r--. 1 atlas atlas    482048 Jun 12 05:26 input.tar.gz
2024-06-12 18:52:50 (450029): Guest Log: -rw-r--r--. 1 atlas atlas     17537 Jun 12 05:26 start_atlas.sh
2024-06-12 18:52:50 (450029): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun 12 05:26 EVNT.38776201._000747.pool.root.1 -> /data/./ATLAS.root_0
2024-06-12 18:52:50 (450029): Guest Log: -rw-r--r--. 1 atlas atlas      2631 Jun 12 05:27 pandaJob.out
2024-06-12 18:52:50 (450029): Guest Log: -rw-------. 1 atlas atlas       424 Jun 12 05:27 setup.sh.local
2024-06-12 18:52:50 (450029): Guest Log: -rw-------. 1 atlas atlas   1024276 Jun 12 05:27 agis_schedconf.cvmfs.json
2024-06-12 18:52:50 (450029): Guest Log: -rw-------. 1 atlas atlas   1324173 Jun 12 05:27 cric_ddmendpoints.json
2024-06-12 18:52:50 (450029): Guest Log: drwx------. 4 atlas atlas      4096 Jun 12 05:27 pilot3
2024-06-12 18:52:50 (450029): Guest Log: -rw-------. 1 atlas atlas 350498813 Jun 12 16:50 HITS.38921007._030996.pool.root.1
2024-06-12 18:52:50 (450029): Guest Log: -rw-------. 1 atlas atlas      1043 Jun 12 16:51 memory_monitor_summary.json
2024-06-12 18:52:50 (450029): Guest Log: -rw-------. 1 atlas atlas         0 Jun 12 16:51 agis_ddmendpoints.agis.ALL.json
2024-06-12 18:52:50 (450029): Guest Log: -rw-------. 1 atlas atlas    525187 Jun 12 16:51 log.38921007._030996.job.log.tgz.1
2024-06-12 18:52:50 (450029): Guest Log: -rw-------. 1 atlas atlas        95 Jun 12 16:51 pilot_heartbeat.json
2024-06-12 18:52:50 (450029): Guest Log: -rw-------. 1 atlas atlas      7749 Jun 12 16:52 heartbeat.json
2024-06-12 18:52:50 (450029): Guest Log: -rw-------. 1 atlas atlas      4466 Jun 12 16:52 pilotlog.txt
2024-06-12 18:52:50 (450029): Guest Log: -rw-------. 1 atlas atlas   2783755 Jun 12 16:52 log.38921007._030996.job.log.1
2024-06-12 18:52:50 (450029): Guest Log: -rw-------. 1 atlas atlas       357 Jun 12 16:52 output.list
2024-06-12 18:52:50 (450029): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun 12 16:52 runtime_log
2024-06-12 18:52:50 (450029): Guest Log: -rw-------. 1 atlas atlas   3328000 Jun 12 16:52 result.tar.gz
2024-06-12 18:52:50 (450029): Guest Log: -rw-r--r--. 1 atlas atlas     11021 Jun 12 16:52 runtime_log.err
2024-06-12 18:52:50 (450029): Guest Log: -rw-------. 1 atlas atlas       678 Jun 12 16:52 jpeLDmgQ7a5n7Olcko1bjSoqABFKDmABFKDmOtvXDmvanKDmW47EJn.diag
2024-06-12 18:52:50 (450029): Guest Log: Looking for outputfile HITS.38921007._030996.pool.root.1
2024-06-12 18:52:50 (450029): Guest Log: HITS file was successfully produced
2024-06-12 18:52:50 (450029): Guest Log: -rw-------. 1 atlas atlas 350498813 Jun 12 16:50 /home/atlas/RunAtlas/HITS.38921007._030996.pool.root.1
2024-06-12 18:52:50 (450029): Guest Log: Successfully finished the ATLAS job!
2024-06-12 18:52:50 (450029): Guest Log: Copying the results back to the shared directory!
2024-06-12 18:52:51 (450029): Guest Log:  *** Contents of shared directory: ***
2024-06-12 18:52:51 (450029): Guest Log: total 575976
2024-06-12 18:52:51 (450029): Guest Log: -rw-r--r--. 1 root root 585949242 Jun 12 05:26 ATLAS.root_0
2024-06-12 18:52:51 (450029): Guest Log: -rw-r--r--. 1 root root      6648 Jun 12 05:26 init_data.xml
2024-06-12 18:52:51 (450029): Guest Log: -rw-r--r--. 1 root root    482048 Jun 12 05:26 input.tar.gz
2024-06-12 18:52:51 (450029): Guest Log: -rw-r--r--. 1 root root   3328000 Jun 12  2024 result.tar.gz
2024-06-12 18:52:51 (450029): Guest Log: -rw-r--r--. 1 root root     17537 Jun 12 05:26 start_atlas.sh
2024-06-12 18:52:51 (450029): Guest Log:  *** Success! Shutting down the machine. ***
2024-06-12 18:52:51 (450029): VM Completion File Detected.
2024-06-12 18:52:51 (450029): Powering off VM.
2024-06-12 18:52:51 (450029): Successfully stopped VM.
2024-06-12 18:52:51 (450029): Deregistering VM. (boinc_27477859d7362517, slot#0)
2024-06-12 18:52:51 (450029): Removing network bandwidth throttle group from VM.
2024-06-12 18:52:51 (450029): Removing VM from VirtualBox.
18:52:57 (450029): called boinc_finish(0)

</stderr_txt>
]]>

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