Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
14:15:04 (200290): wrapper (7.7.26015): starting
14:15:04 (200290): wrapper: running run_atlas (--nthreads 12)
[2024-06-12 14:15:04] Arguments: --nthreads 12
[2024-06-12 14:15:04] Threads: 12
[2024-06-12 14:15:04] Checking for CVMFS
[2024-06-12 14:15:04] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-12 14:15:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-12 14:15:04] Running cvmfs_config stat atlas.cern.ch
[2024-06-12 14:15:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-12 14:15:05] 2.10.1.0 65076 59028 131568 133802 1 81 26740812 45568001 15420 130560 0 226448568 99.733 164853476 21603 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2024-06-12 14:15:05] CVMFS is ok
[2024-06-12 14:15:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-12 14:15:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-12 14:15:05] Further information can be found at the LHC@home message board.
[2024-06-12 14:15:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-12 14:15:05] Checking for apptainer binary...
[2024-06-12 14:15:05] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-12 14:15:05] Running /usr/bin/apptainer --version
[2024-06-12 14:15:05] apptainer version 1.1.8-1.el7
[2024-06-12 14:15:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-12 14:15:06] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0109.triumf.lcg
[2024-06-12 14:15:06] apptainer works
[2024-06-12 14:15:06] Set ATHENA_PROC_NUMBER=12
[2024-06-12 14:15:06] Set ATHENA_CORE_NUMBER=12
[2024-06-12 14:15:06] Starting ATLAS job with PandaID=6226541600
[2024-06-12 14:15:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-12 20:01:57]  *** The last 200 lines of the pilot log: ***
[2024-06-12 20:01:57] 2024-06-13 03:01:41,452 | INFO     | chi2: 5.710060150897208
[2024-06-12 20:01:57] 2024-06-13 03:01:41,452 | INFO     | current chi2=5.710060150897208 (change=-1.5014409821870662e-05 %)
[2024-06-12 20:01:57] 2024-06-13 03:01:41,452 | INFO     | right removable region: 334
[2024-06-12 20:01:57] 2024-06-13 03:01:41,452 | INFO     | model: linear, x: [1718227255.0, 1718227316.0, 1718227377.0, 1718227438.0, 1718227499.0, 1718227560.0, 1718227621.0, 1718227682.0, 1718227743.0, 1718227804.0, 1718
[2024-06-12 20:01:57] 2024-06-13 03:01:41,452 | INFO     | sum of square deviations: 11657783487.534267
[2024-06-12 20:01:57] 2024-06-13 03:01:41,455 | INFO     | sum of deviations: 173467586351.27762
[2024-06-12 20:01:57] 2024-06-13 03:01:41,455 | INFO     | mean x: 1718237442.6746268
[2024-06-12 20:01:57] 2024-06-13 03:01:41,455 | INFO     | mean y: 2707049.0208955226
[2024-06-12 20:01:57] 2024-06-13 03:01:41,455 | INFO     | -- intersect: -25564631911.929516
[2024-06-12 20:01:57] 2024-06-13 03:01:41,455 | INFO     | intersect: -25564631911.929516
[2024-06-12 20:01:57] 2024-06-13 03:01:41,455 | INFO     | chi2: 3.047949101596277
[2024-06-12 20:01:57] 2024-06-13 03:01:41,455 | INFO     | current chi2=3.047949101596277 (change=46.62141065626201 %)
[2024-06-12 20:01:57] 2024-06-13 03:01:41,456 | INFO     | model: linear, x: [1718227560.0, 1718227621.0, 1718227682.0, 1718227743.0, 1718227804.0, 1718227865.0, 1718227926.0, 1718227987.0, 1718228048.0, 1718228109.0, 1718
[2024-06-12 20:01:57] 2024-06-13 03:01:41,456 | INFO     | sum of square deviations: 11143481657.72424
[2024-06-12 20:01:57] 2024-06-13 03:01:41,458 | INFO     | sum of deviations: 89176636851.21817
[2024-06-12 20:01:57] 2024-06-13 03:01:41,458 | INFO     | mean x: 1718237595.1848485
[2024-06-12 20:01:57] 2024-06-13 03:01:41,458 | INFO     | mean y: 2732053.963636364
[2024-06-12 20:01:57] 2024-06-13 03:01:41,458 | INFO     | -- intersect: -13747606911.569523
[2024-06-12 20:01:57] 2024-06-13 03:01:41,458 | INFO     | intersect: -13747606911.569523
[2024-06-12 20:01:57] 2024-06-13 03:01:41,458 | INFO     | chi2: 1.1479580829430291
[2024-06-12 20:01:57] 2024-06-13 03:01:41,458 | INFO     | current chi2=1.1479580829430291 (change=62.33670429923457 %)
[2024-06-12 20:01:57] 2024-06-13 03:01:41,459 | INFO     | model: linear, x: [1718227865.0, 1718227926.0, 1718227987.0, 1718228048.0, 1718228109.0, 1718228170.0, 1718228231.0, 1718228292.0, 1718228353.0, 1718228414.0, 1718
[2024-06-12 20:01:57] 2024-06-13 03:01:41,459 | INFO     | sum of square deviations: 10644528952.843071
[2024-06-12 20:01:57] 2024-06-13 03:01:41,461 | INFO     | sum of deviations: 31426497900.030773
[2024-06-12 20:01:57] 2024-06-13 03:01:41,461 | INFO     | mean x: 1718237747.6953845
[2024-06-12 20:01:57] 2024-06-13 03:01:41,461 | INFO     | mean y: 2749646.3538461537
[2024-06-12 20:01:57] 2024-06-13 03:01:41,461 | INFO     | -- intersect: -5070109397.848396
[2024-06-12 20:01:57] 2024-06-13 03:01:41,461 | INFO     | intersect: -5070109397.848396
[2024-06-12 20:01:57] 2024-06-13 03:01:41,461 | INFO     | chi2: 0.1256239151735757
[2024-06-12 20:01:57] 2024-06-13 03:01:41,462 | INFO     | current chi2=0.1256239151735757 (change=89.05675067407404 %)
[2024-06-12 20:01:57] 2024-06-13 03:01:41,462 | INFO     | model: linear, x: [1718228170.0, 1718228231.0, 1718228292.0, 1718228353.0, 1718228414.0, 1718228477.0, 1718228537.0, 1718228599.0, 1718228659.0, 1718228719.0, 1718
[2024-06-12 20:01:57] 2024-06-13 03:01:41,462 | INFO     | sum of square deviations: 10160692810.387463
[2024-06-12 20:01:57] 2024-06-13 03:01:41,464 | INFO     | sum of deviations: 13163377243.849998
[2024-06-12 20:01:57] 2024-06-13 03:01:41,464 | INFO     | mean x: 1718237900.20625
[2024-06-12 20:01:57] 2024-06-13 03:01:41,464 | INFO     | mean y: 2755377.275
[2024-06-12 20:01:57] 2024-06-13 03:01:41,464 | INFO     | -- intersect: -2223255594.336399
[2024-06-12 20:01:57] 2024-06-13 03:01:41,464 | INFO     | intersect: -2223255594.336399
[2024-06-12 20:01:57] 2024-06-13 03:01:41,465 | INFO     | chi2: 0.01106308495305512
[2024-06-12 20:01:57] 2024-06-13 03:01:41,465 | INFO     | current chi2=0.01106308495305512 (change=91.19348816841988 %)
[2024-06-12 20:01:57] 2024-06-13 03:01:41,465 | INFO     | model: linear, x: [1718228477.0, 1718228537.0, 1718228599.0, 1718228659.0, 1718228719.0, 1718228780.0, 1718228841.0, 1718228902.0, 1718228963.0, 1718229024.0, 1718
[2024-06-12 20:01:57] 2024-06-13 03:01:41,465 | INFO     | sum of square deviations: 9691740667.853952
[2024-06-12 20:01:57] 2024-06-13 03:01:41,467 | INFO     | sum of deviations: 10995463699.365076
[2024-06-12 20:01:57] 2024-06-13 03:01:41,467 | INFO     | mean x: 1718238052.7174604
[2024-06-12 20:01:57] 2024-06-13 03:01:41,467 | INFO     | mean y: 2756080.206349206
[2024-06-12 20:01:57] 2024-06-13 03:01:41,467 | INFO     | -- intersect: -1946617596.102101
[2024-06-12 20:01:57] 2024-06-13 03:01:41,467 | INFO     | intersect: -1946617596.102101
[2024-06-12 20:01:57] 2024-06-13 03:01:41,468 | INFO     | chi2: 0.010175130813207301
[2024-06-12 20:01:57] 2024-06-13 03:01:41,468 | INFO     | current chi2=0.010175130813207301 (change=8.02627968252749 %)
[2024-06-12 20:01:57] 2024-06-13 03:01:41,468 | INFO     | left removable region: 50
[2024-06-12 20:01:57] 2024-06-13 03:01:41,468 | INFO     | model: linear, x: [1718230000.0, 1718230061.0, 1718230122.0, 1718230183.0, 1718230244.0, 1718230305.0, 1718230366.0, 1718230427.0, 1718230489.0, 1718230549.0, 1718
[2024-06-12 20:01:57] 2024-06-13 03:01:41,468 | INFO     | sum of square deviations: 7102565028.123261
[2024-06-12 20:01:57] 2024-06-13 03:01:41,470 | INFO     | sum of deviations: 13490054057.890839
[2024-06-12 20:01:57] 2024-06-13 03:01:41,470 | INFO     | mean x: 1718238632.2711267
[2024-06-12 20:01:57] 2024-06-13 03:01:41,470 | INFO     | mean y: 2754516.5598591547
[2024-06-12 20:01:57] 2024-06-13 03:01:41,470 | INFO     | -- intersect: -3260732961.824922
[2024-06-12 20:01:57] 2024-06-13 03:01:41,470 | INFO     | intersect: -3260732961.824922
[2024-06-12 20:01:57] 2024-06-13 03:01:41,470 | INFO     | chi2: 0.005786641206252452
[2024-06-12 20:01:57] 2024-06-13 03:01:41,470 | INFO     | -- intersect: -3260732961.824922
[2024-06-12 20:01:57] 2024-06-13 03:01:41,470 | INFO     | current memory leak: 1.90 B/s (using 284 data points, chi2=0.01)
[2024-06-12 20:01:57] 2024-06-13 03:01:41,471 | INFO     | ..............................
[2024-06-12 20:01:57] 2024-06-13 03:01:41,471 | INFO     | . Timing measurements:
[2024-06-12 20:01:57] 2024-06-13 03:01:41,471 | INFO     | . get job = 0 s
[2024-06-12 20:01:57] 2024-06-13 03:01:41,471 | INFO     | . initial setup = 2 s
[2024-06-12 20:01:57] 2024-06-13 03:01:41,471 | INFO     | . payload setup = 6 s
[2024-06-12 20:01:57] 2024-06-13 03:01:41,471 | INFO     | . stage-in = 0 s
[2024-06-12 20:01:57] 2024-06-13 03:01:41,471 | INFO     | . payload execution = 20746 s
[2024-06-12 20:01:57] 2024-06-13 03:01:41,471 | INFO     | . stage-out = 1 s
[2024-06-12 20:01:57] 2024-06-13 03:01:41,472 | INFO     | . log creation = 0 s
[2024-06-12 20:01:57] 2024-06-13 03:01:41,472 | INFO     | ..............................
[2024-06-12 20:01:57] 2024-06-13 03:01:41,808 | INFO     | 
[2024-06-12 20:01:57] 2024-06-13 03:01:41,808 | INFO     | job summary report
[2024-06-12 20:01:57] 2024-06-13 03:01:41,808 | INFO     | --------------------------------------------------
[2024-06-12 20:01:57] 2024-06-13 03:01:41,808 | INFO     | PanDA job id: 6226541600
[2024-06-12 20:01:57] 2024-06-13 03:01:41,808 | INFO     | task id: 38921007
[2024-06-12 20:01:57] 2024-06-13 03:01:41,809 | INFO     | errors: (none)
[2024-06-12 20:01:57] 2024-06-13 03:01:41,809 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-12 20:01:57] 2024-06-13 03:01:41,809 | INFO     | pilot state: finished 
[2024-06-12 20:01:57] 2024-06-13 03:01:41,809 | INFO     | transexitcode: 0
[2024-06-12 20:01:57] 2024-06-13 03:01:41,809 | INFO     | exeerrorcode: 0
[2024-06-12 20:01:57] 2024-06-13 03:01:41,809 | INFO     | exeerrordiag: 
[2024-06-12 20:01:57] 2024-06-13 03:01:41,809 | INFO     | exitcode: 0
[2024-06-12 20:01:57] 2024-06-13 03:01:41,809 | INFO     | exitmsg: OK
[2024-06-12 20:01:57] 2024-06-13 03:01:41,810 | INFO     | cpuconsumptiontime: 120839 s
[2024-06-12 20:01:57] 2024-06-13 03:01:41,810 | INFO     | nevents: 400
[2024-06-12 20:01:57] 2024-06-13 03:01:41,810 | INFO     | neventsw: 0
[2024-06-12 20:01:57] 2024-06-13 03:01:41,810 | INFO     | pid: 211192
[2024-06-12 20:01:57] 2024-06-13 03:01:41,810 | INFO     | pgrp: 211192
[2024-06-12 20:01:57] 2024-06-13 03:01:41,810 | INFO     | corecount: 12
[2024-06-12 20:01:57] 2024-06-13 03:01:41,810 | INFO     | event service: False
[2024-06-12 20:01:57] 2024-06-13 03:01:41,810 | INFO     | sizes: {0: 2393247, 1: 2393446, 5: 2393652, 11: 2393708, 20756: 2426830, 20759: 2435784, 20760: 2435968, 20766: 2436138}
[2024-06-12 20:01:57] 2024-06-13 03:01:41,810 | INFO     | --------------------------------------------------
[2024-06-12 20:01:57] 2024-06-13 03:01:41,811 | INFO     | 
[2024-06-12 20:01:57] 2024-06-13 03:01:41,811 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-06-12 20:01:57] 2024-06-13 03:01:41,835 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-12 20:01:57] 2024-06-13 03:01:41,836 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-12 20:01:57] 2024-06-13 03:01:41,836 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-12 20:01:57] 2024-06-13 03:01:41,836 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-12 20:01:57] 2024-06-13 03:01:41,836 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-12 20:01:57] 2024-06-13 03:01:41,836 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-12 20:01:57] 2024-06-13 03:01:41,836 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-12 20:01:57] 2024-06-13 03:01:41,837 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-12 20:01:57] 2024-06-13 03:01:41,837 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-12 20:01:57] 2024-06-13 03:01:41,837 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-12 20:01:57] 2024-06-13 03:01:41,837 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-12 20:01:57] 2024-06-13 03:01:41,837 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-12 20:01:57] 2024-06-13 03:01:41,837 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-12 20:01:57] 2024-06-13 03:01:41,837 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-12 20:01:57] 2024-06-13 03:01:41,838 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-12 20:01:57] 2024-06-13 03:01:41,838 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-12 20:01:57] 2024-06-13 03:01:41,838 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-12 20:01:57] 2024-06-13 03:01:41,838 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-12 20:01:57] 2024-06-13 03:01:41,838 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-12 20:01:57] 2024-06-13 03:01:41,838 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-12 20:01:57] 2024-06-13 03:01:41,838 | INFO     | job 6226541600 has completed (purged errors)
[2024-06-12 20:01:57] 2024-06-13 03:01:41,839 | INFO     | overall cleanup function is called
[2024-06-12 20:01:57] 2024-06-13 03:01:42,848 | INFO     | --- collectZombieJob: --- 10, [211192]
[2024-06-12 20:01:57] 2024-06-13 03:01:42,848 | INFO     | zombie collector waiting for pid 211192
[2024-06-12 20:01:57] 2024-06-13 03:01:42,848 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-12 20:01:57] 2024-06-13 03:01:43,854 | INFO     | collected zombie processes
[2024-06-12 20:01:57] 2024-06-13 03:01:43,854 | INFO     | will now attempt to kill all subprocesses of pid=211192
[2024-06-12 20:01:57] 2024-06-13 03:01:43,956 | INFO     | process IDs to be killed: [211192] (in reverse order)
[2024-06-12 20:01:57] 2024-06-13 03:01:44,033 | WARNING  | found no corresponding commands to process id(s)
[2024-06-12 20:01:57] 2024-06-13 03:01:44,034 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-12 20:01:57] 2024-06-13 03:01:44,043 | INFO     | did not find any defunct processes belonging to 211192
[2024-06-12 20:01:57] 2024-06-13 03:01:44,050 | INFO     | did not find any defunct processes belonging to 211192
[2024-06-12 20:01:57] 2024-06-13 03:01:44,051 | INFO     | ready for new job
[2024-06-12 20:01:57] 2024-06-13 03:01:44,051 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-12 20:01:57] 2024-06-13 03:01:44,054 | INFO     | *************************************
[2024-06-12 20:01:57] 2024-06-13 03:01:44,054 | INFO     | ***  PanDA Pilot version 3.7.6.8  ***
[2024-06-12 20:01:57] 2024-06-13 03:01:44,054 | INFO     | *************************************
[2024-06-12 20:01:57] 2024-06-13 03:01:44,054 | INFO     | 
[2024-06-12 20:01:57] 2024-06-13 03:01:44,058 | INFO     | architecture information:
[2024-06-12 20:01:57] 2024-06-13 03:01:44,059 | INFO     | executing command: cat /etc/os-release
[2024-06-12 20:01:57] 2024-06-13 03:01:44,080 | INFO     | cat /etc/os-release:
[2024-06-12 20:01:57] NAME="CentOS Linux"
[2024-06-12 20:01:57] VERSION="7 (Core)"
[2024-06-12 20:01:57] ID="centos"
[2024-06-12 20:01:57] ID_LIKE="rhel fedora"
[2024-06-12 20:01:57] VERSION_ID="7"
[2024-06-12 20:01:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-12 20:01:57] ANSI_COLOR="0;31"
[2024-06-12 20:01:57] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-12 20:01:57] HOME_URL="https://www.centos.org/"
[2024-06-12 20:01:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-12 20:01:57] 
[2024-06-12 20:01:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-12 20:01:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-12 20:01:57] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-12 20:01:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-12 20:01:57] 
[2024-06-12 20:01:57] 2024-06-13 03:01:44,080 | INFO     | *************************************
[2024-06-12 20:01:57] 2024-06-13 03:01:44,583 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-06-12 20:01:57] 2024-06-13 03:01:44,608 | INFO     | sufficient remaining disk space (1963680858112 B)
[2024-06-12 20:01:57] 2024-06-13 03:01:44,609 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-12 20:01:57] 2024-06-13 03:01:44,609 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-12 20:01:57] 2024-06-13 03:01:44,610 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-12 20:01:57] 2024-06-13 03:01:44,610 | INFO     | found 0 job(s) in 20 queues
[2024-06-12 20:01:57] 2024-06-13 03:01:44,611 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-12 20:01:57] 2024-06-13 03:01:44,611 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-12 20:01:57] 2024-06-13 03:01:44,644 | INFO     | all payload control threads have been joined
[2024-06-12 20:01:57] 2024-06-13 03:01:44,672 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-12 20:01:57] 2024-06-13 03:01:44,673 | INFO     | aborting loop
[2024-06-12 20:01:57] 2024-06-13 03:01:44,684 | INFO     | all data control threads have been joined
[2024-06-12 20:01:57] 2024-06-13 03:01:45,361 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-12 20:01:57] 2024-06-13 03:01:45,426 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-12 20:01:57] 2024-06-13 03:01:45,610 | INFO     | [job] retrieve thread has finished
[2024-06-12 20:01:57] 2024-06-13 03:01:45,646 | INFO     | [payload] control thread has finished
[2024-06-12 20:01:57] 2024-06-13 03:01:45,678 | INFO     | [job] job monitor thread has finished
[2024-06-12 20:01:57] 2024-06-13 03:01:45,686 | INFO     | [data] control thread has finished
[2024-06-12 20:01:57] 2024-06-13 03:01:45,777 | INFO     | [payload] validate_pre thread has finished
[2024-06-12 20:01:57] 2024-06-13 03:01:45,803 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-12 20:01:57] 2024-06-13 03:01:45,816 | INFO     | all job control threads have been joined
[2024-06-12 20:01:57] 2024-06-13 03:01:46,021 | INFO     | [payload] execute_payloads thread has finished
[2024-06-12 20:01:57] 2024-06-13 03:01:46,103 | INFO     | [job] create_data_payload thread has finished
[2024-06-12 20:01:57] 2024-06-13 03:01:46,254 | INFO     | [payload] failed_post thread has finished
[2024-06-12 20:01:57] 2024-06-13 03:01:46,547 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-12 20:01:57] 2024-06-13 03:01:46,821 | INFO     | [job] control thread has finished
[2024-06-12 20:01:57] 2024-06-13 03:01:46,892 | INFO     | [data] copytool_in thread has finished
[2024-06-12 20:01:57] 2024-06-13 03:01:46,905 | INFO     | [job] validate thread has finished
[2024-06-12 20:01:57] 2024-06-13 03:01:46,998 | INFO     | [payload] validate_post thread has finished
[2024-06-12 20:01:57] 2024-06-13 03:01:47,367 | INFO     | [data] copytool_out thread has finished
[2024-06-12 20:01:57] 2024-06-13 03:01:47,553 | INFO     | [job] queue monitor thread has finished
[2024-06-12 20:01:57] 2024-06-13 03:01:49,431 | INFO     | [data] queue_monitor thread has finished
[2024-06-12 20:01:57] 2024-06-13 03:01:51,261 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140507945899840)>', '<ExcThread(monitor, started 140507657246464)>']
[2024-06-12 20:01:57] 2024-06-13 03:01:51,647 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-12 20:01:57] 2024-06-13 03:01:51,647 | INFO     | [monitor] control thread has ended
[2024-06-12 20:01:57] 2024-06-13 03:01:56,286 | INFO     | all workflow threads have been joined
[2024-06-12 20:01:57] 2024-06-13 03:01:56,287 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-12 20:01:57] 2024-06-13 03:01:56,287 | INFO     | traces error code: 0
[2024-06-12 20:01:57] 2024-06-13 03:01:56,287 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-12 20:01:57] 2024-06-13 03:01:56,368 [wrapper] ==== pilot stdout END ====
[2024-06-12 20:01:57] 2024-06-13 03:01:56,373 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-12 20:01:57] 2024-06-13 03:01:56,378 [wrapper] pilotpid: 204566
[2024-06-12 20:01:57] 2024-06-13 03:01:56,383 [wrapper] Pilot exit status: 0
[2024-06-12 20:01:57] 2024-06-13 03:01:56,418 [wrapper] pandaids: 6226541600
[2024-06-12 20:01:57] 2024-06-13 03:01:56,472 [wrapper] cleanup supervisor_pilot  92488 204567
[2024-06-12 20:01:57] 2024-06-13 03:01:56,475 [wrapper] Test setup, not cleaning
[2024-06-12 20:01:57] 2024-06-13 03:01:56,478 [wrapper] ==== wrapper stdout END ====
[2024-06-12 20:01:57] 2024-06-13 03:01:56,481 [wrapper] ==== wrapper stderr END ====
[2024-06-12 20:01:57] 2024-06-13 03:01:56,485 [wrapper] apfmon messages muted
[2024-06-12 20:01:57]  *** Error codes and diagnostics ***
[2024-06-12 20:01:57]     "exeErrorCode": 0,
[2024-06-12 20:01:57]     "exeErrorDiag": "",
[2024-06-12 20:01:57]     "pilotErrorCode": 0,
[2024-06-12 20:01:57]     "pilotErrorDiag": "",
[2024-06-12 20:01:57]  *** Listing of results directory ***
[2024-06-12 20:01:57] total 919072
[2024-06-12 20:01:57] -rw-r--r-- 1 boinc boinc    469443 Jun 10 19:39 pilot3.tar.gz
[2024-06-12 20:01:57] -rw-r--r-- 1 boinc boinc      5654 Jun 10 20:07 queuedata.json
[2024-06-12 20:01:57] -rwx------ 1 boinc boinc     32308 Jun 10 20:08 runpilot2-wrapper.sh
[2024-06-12 20:01:57] -rw-r--r-- 1 boinc boinc       100 Jun 12 14:15 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-12 20:01:57] -rwxr-xr-x 1 boinc boinc      7986 Jun 12 14:15 run_atlas
[2024-06-12 20:01:57] -rw-r--r-- 1 boinc boinc       105 Jun 12 14:15 job.xml
[2024-06-12 20:01:57] -rw-r--r-- 1 boinc boinc      6623 Jun 12 14:15 init_data.xml
[2024-06-12 20:01:57] -rw-r--r-- 2 boinc boinc 581858715 Jun 12 14:15 EVNT.38776201._000742.pool.root.1
[2024-06-12 20:01:57] drwxrwx--x 2 boinc boinc      4096 Jun 12 14:15 shared
[2024-06-12 20:01:57] -rw-r--r-- 2 boinc boinc    482047 Jun 12 14:15 input.tar.gz
[2024-06-12 20:01:57] -rw-r--r-- 2 boinc boinc     17537 Jun 12 14:15 start_atlas.sh
[2024-06-12 20:01:57] -rw-r--r-- 1 boinc boinc         0 Jun 12 14:15 boinc_lockfile
[2024-06-12 20:01:57] -rw-r--r-- 1 boinc boinc      2631 Jun 12 14:15 pandaJob.out
[2024-06-12 20:01:57] -rw------- 1 boinc boinc       424 Jun 12 14:15 setup.sh.local
[2024-06-12 20:01:57] -rw------- 1 boinc boinc   1026730 Jun 12 14:15 agis_schedconf.cvmfs.json
[2024-06-12 20:01:57] -rw------- 1 boinc boinc   1324173 Jun 12 14:15 cric_ddmendpoints.json
[2024-06-12 20:01:57] drwx------ 4 boinc boinc      4096 Jun 12 14:15 pilot3
[2024-06-12 20:01:57] -rw------- 1 boinc boinc 350544827 Jun 12 20:00 HITS.38921007._030869.pool.root.1
[2024-06-12 20:01:57] -rw-r--r-- 1 boinc boinc       533 Jun 12 20:00 boinc_task_state.xml
[2024-06-12 20:01:57] -rw------- 1 boinc boinc        95 Jun 12 20:00 pilot_heartbeat.json
[2024-06-12 20:01:57] -rw------- 1 boinc boinc      1061 Jun 12 20:01 memory_monitor_summary.json
[2024-06-12 20:01:57] -rw------- 1 boinc boinc         0 Jun 12 20:01 agis_ddmendpoints.agis.ALL.json
[2024-06-12 20:01:57] -rw------- 1 boinc boinc    531836 Jun 12 20:01 log.38921007._030869.job.log.tgz.1
[2024-06-12 20:01:57] -rw-r--r-- 1 boinc boinc      8192 Jun 12 20:01 boinc_mmap_file
[2024-06-12 20:01:57] -rw-r--r-- 1 boinc boinc        29 Jun 12 20:01 wrapper_checkpoint.txt
[2024-06-12 20:01:57] -rw------- 1 boinc boinc      7793 Jun 12 20:01 heartbeat.json
[2024-06-12 20:01:57] -rw------- 1 boinc boinc      4333 Jun 12 20:01 pilotlog.txt
[2024-06-12 20:01:57] -rw------- 1 boinc boinc   2059887 Jun 12 20:01 log.38921007._030869.job.log.1
[2024-06-12 20:01:57] -rw------- 1 boinc boinc       357 Jun 12 20:01 output.list
[2024-06-12 20:01:57] -rw-r--r-- 1 boinc boinc       620 Jun 12 20:01 runtime_log
[2024-06-12 20:01:57] -rw------- 1 boinc boinc   2611200 Jun 12 20:01 result.tar.gz
[2024-06-12 20:01:57] -rw-r--r-- 1 boinc boinc     11287 Jun 12 20:01 runtime_log.err
[2024-06-12 20:01:57] -rw------- 1 boinc boinc       660 Jun 12 20:01 gEkNDmX36a5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmGbRKDmKYzqKm.diag
[2024-06-12 20:01:57] -rw-r--r-- 1 boinc boinc     21983 Jun 12 20:01 stderr.txt
[2024-06-12 20:01:57] HITS file was successfully produced:
[2024-06-12 20:01:57] -rw------- 1 boinc boinc 350544827 Jun 12 20:00 shared/HITS.pool.root.1
[2024-06-12 20:01:57]  *** Contents of shared directory: ***
[2024-06-12 20:01:57] total 913608
[2024-06-12 20:01:57] -rw-r--r-- 2 boinc boinc 581858715 Jun 12 14:15 ATLAS.root_0
[2024-06-12 20:01:57] -rw-r--r-- 2 boinc boinc    482047 Jun 12 14:15 input.tar.gz
[2024-06-12 20:01:57] -rw-r--r-- 2 boinc boinc     17537 Jun 12 14:15 start_atlas.sh
[2024-06-12 20:01:57] -rw------- 1 boinc boinc 350544827 Jun 12 20:00 HITS.pool.root.1
[2024-06-12 20:01:57] -rw------- 1 boinc boinc   2611200 Jun 12 20:01 result.tar.gz
20:01:59 (200290): run_atlas exited; CPU time 120242.440192
20:01:59 (200290): called boinc_finish(0)

</stderr_txt>
]]>

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