Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2024-06-11 10:35:09 (1112718): Detected: vboxwrapper 26206
2024-06-11 10:35:09 (1112718): Detected: BOINC client v7.24.1
2024-06-11 10:35:09 (1112718): Detected: VirtualBox VboxManage Interface (Version: 7.0.18)
2024-06-11 10:35:09 (1112718): Successfully copied 'init_data.xml' to the shared directory.
2024-06-11 10:35:09 (1112718): Create VM. (boinc_f55e902beacadf35, slot#0)
2024-06-11 10:35:09 (1112718): Setting Memory Size for VM. (4800MB)
2024-06-11 10:35:10 (1112718): Setting CPU Count for VM. (8)
2024-06-11 10:35:10 (1112718): Setting Chipset Options for VM.
2024-06-11 10:35:10 (1112718): Setting Graphics Controller Options for VM.
2024-06-11 10:35:10 (1112718): Setting Boot Options for VM.
2024-06-11 10:35:10 (1112718): Setting Network Configuration for NAT.
2024-06-11 10:35:10 (1112718): Enabling VM Network Access.
2024-06-11 10:35:10 (1112718): Disabling USB Support for VM.
2024-06-11 10:35:10 (1112718): Disabling COM Port Support for VM.
2024-06-11 10:35:10 (1112718): Disabling LPT Port Support for VM.
2024-06-11 10:35:10 (1112718): Disabling Audio Support for VM.
2024-06-11 10:35:10 (1112718): Disabling Clipboard Support for VM.
2024-06-11 10:35:10 (1112718): Disabling Drag and Drop Support for VM.
2024-06-11 10:35:10 (1112718): Adding storage controller(s) to VM.
2024-06-11 10:35:10 (1112718): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-06-11 10:35:11 (1112718): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-06-11 10:35:11 (1112718): forwarding host port 56783 to guest port 80
2024-06-11 10:35:11 (1112718): Enabling remote desktop for VM.
2024-06-11 10:35:11 (1112718): Required extension pack not installed, remote desktop not enabled.
2024-06-11 10:35:11 (1112718): Enabling shared directory for VM.
2024-06-11 10:35:11 (1112718): Starting VM using VBoxManage interface. (boinc_f55e902beacadf35, slot#0)
2024-06-11 10:35:13 (1112718): Successfully started VM. (PID = '1112972')
2024-06-11 10:35:13 (1112718): Reporting VM Process ID to BOINC.
2024-06-11 10:35:13 (1112718): Guest Log: BIOS: VirtualBox 7.0.18
2024-06-11 10:35:13 (1112718): Guest Log: CPUID EDX: 0x178bfbff
2024-06-11 10:35:13 (1112718): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-06-11 10:35:13 (1112718): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-06-11 10:35:13 (1112718): VM state change detected. (old = 'poweredoff', new = 'running')
2024-06-11 10:35:13 (1112718): Detected: Web Application Enabled (http://localhost:56783)
2024-06-11 10:35:13 (1112718): Preference change detected
2024-06-11 10:35:13 (1112718): Setting CPU throttle for VM. (50%)
2024-06-11 10:35:13 (1112718): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2024-06-11 10:35:14 (1112718): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-06-11 10:35:14 (1112718): Guest Log: BIOS: Booting from Hard Disk...
2024-06-11 10:35:17 (1112718): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-06-11 10:35:17 (1112718): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-06-11 10:35:17 (1112718): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-06-11 10:35:17 (1112718): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-06-11 10:35:17 (1112718): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-06-11 10:35:17 (1112718): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-06-11 10:35:17 (1112718): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-06-11 10:35:17 (1112718): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-06-11 10:35:17 (1112718): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-06-11 10:35:17 (1112718): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-06-11 10:35:17 (1112718): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-06-11 10:35:17 (1112718): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-06-11 10:35:17 (1112718): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-06-11 10:35:17 (1112718): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-06-11 10:35:17 (1112718): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-06-11 10:35:17 (1112718): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-06-11 10:35:17 (1112718): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-06-11 10:35:17 (1112718): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-06-11 10:35:17 (1112718): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-06-11 10:35:17 (1112718): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-06-11 10:35:17 (1112718): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-06-11 10:35:17 (1112718): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-06-11 10:35:17 (1112718): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-06-11 10:35:17 (1112718): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-06-11 10:35:17 (1112718): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-06-11 10:35:17 (1112718): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-06-11 10:35:17 (1112718): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-06-11 10:35:17 (1112718): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-06-11 10:35:17 (1112718): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-06-11 10:35:17 (1112718): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-06-11 10:35:17 (1112718): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-06-11 10:35:17 (1112718): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-06-11 10:35:25 (1112718): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-06-11 10:35:25 (1112718): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-06-11 10:35:31 (1112718): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-06-11 10:35:31 (1112718): Guest Log: 00:00:00.000127 main     Log opened 2024-06-11T08:35:30.338503000Z
2024-06-11 10:35:31 (1112718): Guest Log: 00:00:00.000192 main     OS Product: Linux
2024-06-11 10:35:31 (1112718): Guest Log: 00:00:00.000204 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-06-11 10:35:31 (1112718): Guest Log: 00:00:00.000216 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-06-11 10:35:31 (1112718): Guest Log: 00:00:00.000225 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-06-11 10:35:31 (1112718): Guest Log: 00:00:00.000226 main     Process ID: 1361
2024-06-11 10:35:31 (1112718): Guest Log: 00:00:00.000226 main     Package type: LINUX_64BITS_GENERIC
2024-06-11 10:35:31 (1112718): Guest Log: 00:00:00.000540 main     5.2.32 r132073 started. Verbose level = 0
2024-06-11 10:35:31 (1112718): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-06-11 10:35:31 (1112718): Guest Log: [INFO] Mounting shared directory
2024-06-11 10:35:31 (1112718): Guest Log: [INFO] Checking for init_data.xml
2024-06-11 10:35:32 (1112718): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-06-11 10:35:32 (1112718): Guest Log: [INFO] Detected branch: prod
2024-06-11 10:35:33 (1112718): Guest Log: This is the prod version of the ATLAS job wrapper
2024-06-11 10:35:33 (1112718): Guest Log: Copying input files
2024-06-11 10:35:36 (1112718): Guest Log: Copied input files into RunAtlas.
2024-06-11 10:35:36 (1112718): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-06-11 10:35:36 (1112718): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-06-11 10:35:36 (1112718): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-06-11 10:35:36 (1112718): Guest Log: Further information can be found at the LHC@home message board.
2024-06-11 10:35:43 (1112718): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-06-11 10:35:43 (1112718): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-06-11 10:35:43 (1112718): Guest Log: 2.6.3.0 1635 0 30212 133744 4 1 3117205 4096000 0 65024 0 0 n/a 1 20 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
2024-06-11 10:35:44 (1112718): Guest Log: copied the webapp to /var/www
2024-06-11 10:35:44 (1112718): Guest Log: ATHENA_PROC_NUMBER=8
2024-06-11 10:35:44 (1112718): Guest Log: ATHENA_CORE_NUMBER=8
2024-06-11 10:35:45 (1112718): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-06-11 10:35:45 (1112718): Guest Log:  *** Starting ATLAS job. (PandaID=6226245529 taskID=38921007) ***
2024-06-11 12:14:13 (1112718): Status Report: Elapsed Time: '6000.000000'
2024-06-11 12:14:13 (1112718): Status Report: CPU Time: '18881.180000'
2024-06-11 13:53:13 (1112718): Status Report: Elapsed Time: '12000.000000'
2024-06-11 13:53:13 (1112718): Status Report: CPU Time: '41526.320000'
2024-06-11 15:32:14 (1112718): Status Report: Elapsed Time: '18000.000000'
2024-06-11 15:32:14 (1112718): Status Report: CPU Time: '64164.760000'
2024-06-11 16:11:17 (1112718): Guest Log:  *** Job finished ***
2024-06-11 16:11:17 (1112718): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-06-11 16:11:17 (1112718): Guest Log: 2024-06-11 14:11:09,465 | INFO     | [job] create_data_payload thread has finished
2024-06-11 16:11:17 (1112718): Guest Log: 2024-06-11 14:11:10,441 | INFO     | [job] queue monitor thread has finished
2024-06-11 16:11:17 (1112718): Guest Log: 2024-06-11 14:11:11,669 | INFO     | [data] queue_monitor thread has finished
2024-06-11 16:11:17 (1112718): Guest Log: 2024-06-11 14:11:12,000 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140062565558080)>', '<ExcThread(monitor, started 140062146676480)>']
2024-06-11 16:11:17 (1112718): Guest Log: 2024-06-11 14:11:12,441 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-06-11 16:11:17 (1112718): Guest Log: 2024-06-11 14:11:12,441 | INFO     | [monitor] control thread has ended
2024-06-11 16:11:17 (1112718): Guest Log: 2024-06-11 14:11:17,009 | INFO     | all workflow threads have been joined
2024-06-11 16:11:17 (1112718): Guest Log: 2024-06-11 14:11:17,009 | INFO     | end of generic workflow (traces error code: 0)
2024-06-11 16:11:17 (1112718): Guest Log: 2024-06-11 14:11:17,009 | INFO     | traces error code: 0
2024-06-11 16:11:17 (1112718): Guest Log: 2024-06-11 14:11:17,009 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-06-11 16:11:17 (1112718): Guest Log: 2024-06-11 14:11:17,057 [wrapper] ==== pilot stdout END ====
2024-06-11 16:11:17 (1112718): Guest Log: 2024-06-11 14:11:17,060 [wrapper] ==== wrapper stdout RESUME ====
2024-06-11 16:11:17 (1112718): Guest Log: 2024-06-11 14:11:17,062 [wrapper] pilotpid: 6541
2024-06-11 16:11:17 (1112718): Guest Log: 2024-06-11 14:11:17,065 [wrapper] Pilot exit status: 0
2024-06-11 16:11:17 (1112718): Guest Log: 2024-06-11 14:11:17,078 [wrapper] pandaids: 6226245529
2024-06-11 16:11:17 (1112718): Guest Log: 2024-06-11 14:11:17,094 [wrapper] cleanup supervisor_pilot 20454 6542
2024-06-11 16:11:17 (1112718): Guest Log: 2024-06-11 14:11:17,097 [wrapper] Test setup, not cleaning
2024-06-11 16:11:17 (1112718): Guest Log: 2024-06-11 14:11:17,100 [wrapper] ==== wrapper stdout END ====
2024-06-11 16:11:17 (1112718): Guest Log: 2024-06-11 14:11:17,103 [wrapper] ==== wrapper stderr END ====
2024-06-11 16:11:17 (1112718): Guest Log: 2024-06-11 14:11:17,109 [wrapper] apfmon messages muted
2024-06-11 16:11:17 (1112718): Guest Log:  *** Error codes and diagnostics ***
2024-06-11 16:11:17 (1112718): Guest Log:     "exeErrorCode": 0,
2024-06-11 16:11:17 (1112718): Guest Log:     "exeErrorDiag": "",
2024-06-11 16:11:17 (1112718): Guest Log:     "pilotErrorCode": 0,
2024-06-11 16:11:17 (1112718): Guest Log:     "pilotErrorDiag": "",
2024-06-11 16:11:17 (1112718): Guest Log:  *** Listing of results directory ***
2024-06-11 16:11:17 (1112718): Guest Log: total 342692
2024-06-11 16:11:17 (1112718): Guest Log: -rw-r--r--. 1 atlas atlas    469443 Jun 10 17:18 pilot3.tar.gz
2024-06-11 16:11:17 (1112718): Guest Log: -rw-r--r--. 1 atlas atlas      5654 Jun 10 17:22 queuedata.json
2024-06-11 16:11:17 (1112718): Guest Log: -rwx------. 1 atlas atlas     32308 Jun 10 17:23 runpilot2-wrapper.sh
2024-06-11 16:11:17 (1112718): Guest Log: -rw-r--r--. 1 atlas atlas     17537 Jun 11 08:35 start_atlas.sh
2024-06-11 16:11:17 (1112718): Guest Log: -rw-r--r--. 1 atlas atlas    482040 Jun 11 08:35 input.tar.gz
2024-06-11 16:11:17 (1112718): Guest Log: -rw-r--r--. 1 atlas atlas      6810 Jun 11 08:35 init_data.xml
2024-06-11 16:11:17 (1112718): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun 11 08:35 EVNT.38776201._000673.pool.root.1 -> /data/./ATLAS.root_0
2024-06-11 16:11:17 (1112718): Guest Log: -rw-r--r--. 1 atlas atlas      2630 Jun 11 08:35 pandaJob.out
2024-06-11 16:11:17 (1112718): Guest Log: -rw-------. 1 atlas atlas       424 Jun 11 08:35 setup.sh.local
2024-06-11 16:11:17 (1112718): Guest Log: -rw-------. 1 atlas atlas   1016293 Jun 11 08:35 agis_schedconf.cvmfs.json
2024-06-11 16:11:17 (1112718): Guest Log: -rw-------. 1 atlas atlas   1324173 Jun 11 08:35 cric_ddmendpoints.json
2024-06-11 16:11:17 (1112718): Guest Log: drwx------. 4 atlas atlas      4096 Jun 11 08:35 pilot3
2024-06-11 16:11:17 (1112718): Guest Log: -rw-------. 1 atlas atlas 344321756 Jun 11 14:10 HITS.38921007._029079.pool.root.1
2024-06-11 16:11:17 (1112718): Guest Log: -rw-------. 1 atlas atlas        95 Jun 11 14:10 pilot_heartbeat.json
2024-06-11 16:11:17 (1112718): Guest Log: -rw-------. 1 atlas atlas      1035 Jun 11 14:10 memory_monitor_summary.json
2024-06-11 16:11:17 (1112718): Guest Log: -rw-------. 1 atlas atlas         0 Jun 11 14:11 agis_ddmendpoints.agis.ALL.json
2024-06-11 16:11:17 (1112718): Guest Log: -rw-------. 1 atlas atlas    387295 Jun 11 14:11 log.38921007._029079.job.log.tgz.1
2024-06-11 16:11:17 (1112718): Guest Log: -rw-------. 1 atlas atlas      7753 Jun 11 14:11 heartbeat.json
2024-06-11 16:11:17 (1112718): Guest Log: -rw-------. 1 atlas atlas      4271 Jun 11 14:11 pilotlog.txt
2024-06-11 16:11:17 (1112718): Guest Log: -rw-------. 1 atlas atlas   1182864 Jun 11 14:11 log.38921007._029079.job.log.1
2024-06-11 16:11:17 (1112718): Guest Log: -rw-------. 1 atlas atlas       357 Jun 11 14:11 output.list
2024-06-11 16:11:17 (1112718): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun 11 14:11 runtime_log
2024-06-11 16:11:17 (1112718): Guest Log: -rw-------. 1 atlas atlas   1587200 Jun 11 14:11 result.tar.gz
2024-06-11 16:11:17 (1112718): Guest Log: -rw-r--r--. 1 atlas atlas     11015 Jun 11 14:11 runtime_log.err
2024-06-11 16:11:17 (1112718): Guest Log: -rw-------. 1 atlas atlas       675 Jun 11 14:11 7Y8NDmRvxa5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmoNRKDmBEpIHm.diag
2024-06-11 16:11:17 (1112718): Guest Log: Looking for outputfile HITS.38921007._029079.pool.root.1
2024-06-11 16:11:18 (1112718): Guest Log: HITS file was successfully produced
2024-06-11 16:11:18 (1112718): Guest Log: -rw-------. 1 atlas atlas 344321756 Jun 11 14:10 /home/atlas/RunAtlas/HITS.38921007._029079.pool.root.1
2024-06-11 16:11:18 (1112718): Guest Log: Successfully finished the ATLAS job!
2024-06-11 16:11:18 (1112718): Guest Log: Copying the results back to the shared directory!
2024-06-11 16:11:18 (1112718): Guest Log:  *** Contents of shared directory: ***
2024-06-11 16:11:18 (1112718): Guest Log: total 569812
2024-06-11 16:11:18 (1112718): Guest Log: -rw-r--r--. 1 root root 581379372 Jun 11 08:35 ATLAS.root_0
2024-06-11 16:11:18 (1112718): Guest Log: -rw-r--r--. 1 root root      6810 Jun 11 08:35 init_data.xml
2024-06-11 16:11:18 (1112718): Guest Log: -rw-r--r--. 1 root root    482040 Jun 11 08:35 input.tar.gz
2024-06-11 16:11:18 (1112718): Guest Log: -rw-r--r--. 1 root root   1587200 Jun 11 14:11 result.tar.gz
2024-06-11 16:11:18 (1112718): Guest Log: -rw-r--r--. 1 root root     17537 Jun 11 08:35 start_atlas.sh
2024-06-11 16:11:18 (1112718): Guest Log:  *** Success! Shutting down the machine. ***
2024-06-11 16:11:18 (1112718): VM Completion File Detected.
2024-06-11 16:11:18 (1112718): Powering off VM.
2024-06-11 16:11:18 (1112718): Successfully stopped VM.
2024-06-11 16:11:18 (1112718): Deregistering VM. (boinc_f55e902beacadf35, slot#0)
2024-06-11 16:11:18 (1112718): Removing network bandwidth throttle group from VM.
2024-06-11 16:11:19 (1112718): Removing VM from VirtualBox.
16:11:24 (1112718): called boinc_finish(0)

</stderr_txt>
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