Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2024-06-12 00:29:41 (395321): Detected: vboxwrapper 26206
2024-06-12 00:29:41 (395321): Detected: BOINC client v7.24.1
2024-06-12 00:29:41 (395321): Detected: VirtualBox VboxManage Interface (Version: 7.0.18)
2024-06-12 00:29:41 (395321): Successfully copied 'init_data.xml' to the shared directory.
2024-06-12 00:29:41 (395321): Create VM. (boinc_ab4e5b81d2a876de, slot#0)
2024-06-12 00:29:41 (395321): Setting Memory Size for VM. (4600MB)
2024-06-12 00:29:42 (395321): Setting CPU Count for VM. (6)
2024-06-12 00:29:42 (395321): Setting Chipset Options for VM.
2024-06-12 00:29:42 (395321): Setting Graphics Controller Options for VM.
2024-06-12 00:29:42 (395321): Setting Boot Options for VM.
2024-06-12 00:29:42 (395321): Setting Network Configuration for NAT.
2024-06-12 00:29:42 (395321): Enabling VM Network Access.
2024-06-12 00:29:42 (395321): Disabling USB Support for VM.
2024-06-12 00:29:43 (395321): Disabling COM Port Support for VM.
2024-06-12 00:29:43 (395321): Disabling LPT Port Support for VM.
2024-06-12 00:29:43 (395321): Disabling Audio Support for VM.
2024-06-12 00:29:43 (395321): Disabling Clipboard Support for VM.
2024-06-12 00:29:43 (395321): Disabling Drag and Drop Support for VM.
2024-06-12 00:29:44 (395321): Adding storage controller(s) to VM.
2024-06-12 00:29:44 (395321): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-06-12 00:29:46 (395321): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-06-12 00:29:46 (395321): forwarding host port 40571 to guest port 80
2024-06-12 00:29:46 (395321): Enabling remote desktop for VM.
2024-06-12 00:29:46 (395321): Required extension pack not installed, remote desktop not enabled.
2024-06-12 00:29:46 (395321): Enabling shared directory for VM.
2024-06-12 00:29:46 (395321): Starting VM using VBoxManage interface. (boinc_ab4e5b81d2a876de, slot#0)
2024-06-12 00:29:48 (395321): Successfully started VM. (PID = '395575')
2024-06-12 00:29:48 (395321): Reporting VM Process ID to BOINC.
2024-06-12 00:29:48 (395321): Guest Log: BIOS: VirtualBox 7.0.18
2024-06-12 00:29:48 (395321): Guest Log: CPUID EDX: 0x178bfbff
2024-06-12 00:29:48 (395321): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-06-12 00:29:48 (395321): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-06-12 00:29:48 (395321): VM state change detected. (old = 'poweredoff', new = 'running')
2024-06-12 00:29:48 (395321): Detected: Web Application Enabled (http://localhost:40571)
2024-06-12 00:29:48 (395321): Preference change detected
2024-06-12 00:29:48 (395321): Setting CPU throttle for VM. (50%)
2024-06-12 00:29:48 (395321): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2024-06-12 00:29:50 (395321): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-06-12 00:29:50 (395321): Guest Log: BIOS: Booting from Hard Disk...
2024-06-12 00:29:56 (395321): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-06-12 00:29:56 (395321): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-06-12 00:29:56 (395321): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-06-12 00:29:56 (395321): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-06-12 00:29:56 (395321): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-06-12 00:29:56 (395321): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-06-12 00:29:56 (395321): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-06-12 00:29:56 (395321): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-06-12 00:29:56 (395321): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-06-12 00:29:56 (395321): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-06-12 00:29:56 (395321): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-06-12 00:29:56 (395321): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-06-12 00:29:56 (395321): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-06-12 00:29:56 (395321): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-06-12 00:29:56 (395321): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-06-12 00:29:56 (395321): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-06-12 00:29:56 (395321): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-06-12 00:29:56 (395321): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-06-12 00:29:56 (395321): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-06-12 00:29:56 (395321): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-06-12 00:29:56 (395321): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-06-12 00:29:56 (395321): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-06-12 00:29:56 (395321): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-06-12 00:29:56 (395321): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-06-12 00:29:56 (395321): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-06-12 00:29:56 (395321): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-06-12 00:29:56 (395321): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-06-12 00:29:56 (395321): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-06-12 00:29:56 (395321): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-06-12 00:29:56 (395321): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-06-12 00:29:56 (395321): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-06-12 00:29:56 (395321): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-06-12 00:30:07 (395321): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-06-12 00:30:07 (395321): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-06-12 00:30:24 (395321): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-06-12 00:30:24 (395321): Guest Log: 00:00:00.000119 main     Log opened 2024-06-11T22:30:23.159953000Z
2024-06-12 00:30:24 (395321): Guest Log: 00:00:00.000200 main     OS Product: Linux
2024-06-12 00:30:24 (395321): Guest Log: 00:00:00.000226 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-06-12 00:30:24 (395321): Guest Log: 00:00:00.000246 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-06-12 00:30:24 (395321): Guest Log: 00:00:00.000267 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-06-12 00:30:24 (395321): Guest Log: 00:00:00.000267 main     Process ID: 1328
2024-06-12 00:30:24 (395321): Guest Log: 00:00:00.000268 main     Package type: LINUX_64BITS_GENERIC
2024-06-12 00:30:24 (395321): Guest Log: 00:00:00.001720 main     5.2.32 r132073 started. Verbose level = 0
2024-06-12 00:30:25 (395321): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-06-12 00:30:25 (395321): Guest Log: [INFO] Mounting shared directory
2024-06-12 00:30:25 (395321): Guest Log: [INFO] Checking for init_data.xml
2024-06-12 00:30:30 (395321): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-06-12 00:30:30 (395321): Guest Log: [INFO] Detected branch: prod
2024-06-12 00:30:30 (395321): Guest Log: This is the prod version of the ATLAS job wrapper
2024-06-12 00:30:30 (395321): Guest Log: Copying input files
2024-06-12 00:30:43 (395321): Guest Log: Copied input files into RunAtlas.
2024-06-12 00:30:43 (395321): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-06-12 00:30:43 (395321): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-06-12 00:30:43 (395321): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-06-12 00:30:43 (395321): Guest Log: Further information can be found at the LHC@home message board.
2024-06-12 00:30:53 (395321): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-06-12 00:30:53 (395321): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-06-12 00:30:53 (395321): Guest Log: 2.6.3.0 1606 0 30200 133767 4 1 3117205 4096000 0 65024 0 0 n/a 1 4 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
2024-06-12 00:30:56 (395321): Guest Log: copied the webapp to /var/www
2024-06-12 00:30:56 (395321): Guest Log: ATHENA_PROC_NUMBER=6
2024-06-12 00:30:56 (395321): Guest Log: ATHENA_CORE_NUMBER=6
2024-06-12 00:30:57 (395321): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-06-12 00:30:57 (395321): Guest Log:  *** Starting ATLAS job. (PandaID=6226216191 taskID=38921007) ***
2024-06-12 02:08:49 (395321): Status Report: Elapsed Time: '6000.000000'
2024-06-12 02:08:49 (395321): Status Report: CPU Time: '15542.130000'
2024-06-12 03:47:49 (395321): Status Report: Elapsed Time: '12000.000000'
2024-06-12 03:47:49 (395321): Status Report: CPU Time: '35430.060000'
2024-06-12 05:26:50 (395321): Status Report: Elapsed Time: '18000.000000'
2024-06-12 05:26:50 (395321): Status Report: CPU Time: '55289.970000'
2024-06-12 07:05:50 (395321): Status Report: Elapsed Time: '24000.000000'
2024-06-12 07:05:50 (395321): Status Report: CPU Time: '75181.450000'
2024-06-12 08:44:50 (395321): Status Report: Elapsed Time: '30000.000000'
2024-06-12 08:44:50 (395321): Status Report: CPU Time: '95129.000000'
2024-06-12 10:23:51 (395321): Status Report: Elapsed Time: '36000.000000'
2024-06-12 10:23:51 (395321): Status Report: CPU Time: '114988.340000'
2024-06-12 12:02:51 (395321): Status Report: Elapsed Time: '42000.000000'
2024-06-12 12:02:51 (395321): Status Report: CPU Time: '134787.110000'
2024-06-12 12:13:21 (395321): Guest Log:  *** Job finished ***
2024-06-12 12:13:21 (395321): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-06-12 12:13:21 (395321): Guest Log: 2024-06-12 10:13:04,272 | INFO     | [data] queue_monitor thread has finished
2024-06-12 12:13:21 (395321): Guest Log: 2024-06-12 10:13:10,375 | INFO     | job.realtimelogging is not enabled
2024-06-12 12:13:21 (395321): Guest Log: 2024-06-12 10:13:11,377 | INFO     | [payload] run_realtimelog thread has finished
2024-06-12 12:13:21 (395321): Guest Log: 2024-06-12 10:13:13,055 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139980796778304)>', '<ExcThread(monitor, started 139980047357696)>']
2024-06-12 12:13:21 (395321): Guest Log: 2024-06-12 10:13:13,405 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-06-12 12:13:21 (395321): Guest Log: 2024-06-12 10:13:13,405 | INFO     | [monitor] control thread has ended
2024-06-12 12:13:21 (395321): Guest Log: 2024-06-12 10:13:18,057 | INFO     | all workflow threads have been joined
2024-06-12 12:13:21 (395321): Guest Log: 2024-06-12 10:13:18,058 | INFO     | end of generic workflow (traces error code: 0)
2024-06-12 12:13:21 (395321): Guest Log: 2024-06-12 10:13:18,059 | INFO     | traces error code: 0
2024-06-12 12:13:21 (395321): Guest Log: 2024-06-12 10:13:18,059 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-06-12 12:13:21 (395321): Guest Log: 2024-06-12 10:13:18,143 [wrapper] ==== pilot stdout END ====
2024-06-12 12:13:21 (395321): Guest Log: 2024-06-12 10:13:18,148 [wrapper] ==== wrapper stdout RESUME ====
2024-06-12 12:13:21 (395321): Guest Log: 2024-06-12 10:13:18,152 [wrapper] pilotpid: 6503
2024-06-12 12:13:21 (395321): Guest Log: 2024-06-12 10:13:18,156 [wrapper] Pilot exit status: 0
2024-06-12 12:13:21 (395321): Guest Log: 2024-06-12 10:13:18,174 [wrapper] pandaids: 6226216191
2024-06-12 12:13:21 (395321): Guest Log: 2024-06-12 10:13:18,204 [wrapper] cleanup supervisor_pilot 17235 6504
2024-06-12 12:13:21 (395321): Guest Log: 2024-06-12 10:13:18,210 [wrapper] Test setup, not cleaning
2024-06-12 12:13:21 (395321): Guest Log: 2024-06-12 10:13:18,213 [wrapper] ==== wrapper stdout END ====
2024-06-12 12:13:21 (395321): Guest Log: 2024-06-12 10:13:18,217 [wrapper] ==== wrapper stderr END ====
2024-06-12 12:13:21 (395321): Guest Log: 2024-06-12 10:13:18,224 [wrapper] apfmon messages muted
2024-06-12 12:13:21 (395321): Guest Log:  *** Error codes and diagnostics ***
2024-06-12 12:13:21 (395321): Guest Log:     "exeErrorCode": 0,
2024-06-12 12:13:21 (395321): Guest Log:     "exeErrorDiag": "",
2024-06-12 12:13:21 (395321): Guest Log:     "pilotErrorCode": 0,
2024-06-12 12:13:21 (395321): Guest Log:     "pilotErrorDiag": "",
2024-06-12 12:13:21 (395321): Guest Log:  *** Listing of results directory ***
2024-06-12 12:13:21 (395321): Guest Log: total 358428
2024-06-12 12:13:21 (395321): Guest Log: -rw-r--r--. 1 atlas atlas    469443 Jun 10 16:44 pilot3.tar.gz
2024-06-12 12:13:21 (395321): Guest Log: -rw-r--r--. 1 atlas atlas      5654 Jun 10 16:49 queuedata.json
2024-06-12 12:13:21 (395321): Guest Log: -rwx------. 1 atlas atlas     32308 Jun 10 16:50 runpilot2-wrapper.sh
2024-06-12 12:13:21 (395321): Guest Log: -rw-r--r--. 1 atlas atlas     17537 Jun 11 22:30 start_atlas.sh
2024-06-12 12:13:21 (395321): Guest Log: -rw-r--r--. 1 atlas atlas    482054 Jun 11 22:30 input.tar.gz
2024-06-12 12:13:21 (395321): Guest Log: -rw-r--r--. 1 atlas atlas      6647 Jun 11 22:30 init_data.xml
2024-06-12 12:13:21 (395321): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun 11 22:30 EVNT.38776201._000671.pool.root.1 -> /data/./ATLAS.root_0
2024-06-12 12:13:21 (395321): Guest Log: -rw-r--r--. 1 atlas atlas      2631 Jun 11 22:30 pandaJob.out
2024-06-12 12:13:21 (395321): Guest Log: -rw-------. 1 atlas atlas       424 Jun 11 22:30 setup.sh.local
2024-06-12 12:13:21 (395321): Guest Log: -rw-------. 1 atlas atlas   1024138 Jun 11 22:31 agis_schedconf.cvmfs.json
2024-06-12 12:13:21 (395321): Guest Log: -rw-------. 1 atlas atlas   1324173 Jun 11 22:31 cric_ddmendpoints.json
2024-06-12 12:13:21 (395321): Guest Log: drwx------. 4 atlas atlas      4096 Jun 11 22:31 pilot3
2024-06-12 12:13:21 (395321): Guest Log: -rw-------. 1 atlas atlas 356245526 Jun 12 10:11 HITS.38921007._029031.pool.root.1
2024-06-12 12:13:21 (395321): Guest Log: -rw-------. 1 atlas atlas        95 Jun 12 10:12 pilot_heartbeat.json
2024-06-12 12:13:21 (395321): Guest Log: -rw-------. 1 atlas atlas      1031 Jun 12 10:12 memory_monitor_summary.json
2024-06-12 12:13:21 (395321): Guest Log: -rw-------. 1 atlas atlas         0 Jun 12 10:12 agis_ddmendpoints.agis.ALL.json
2024-06-12 12:13:21 (395321): Guest Log: -rw-------. 1 atlas atlas    535990 Jun 12 10:12 log.38921007._029031.job.log.tgz.1
2024-06-12 12:13:21 (395321): Guest Log: -rw-------. 1 atlas atlas      7743 Jun 12 10:12 heartbeat.json
2024-06-12 12:13:21 (395321): Guest Log: -rw-------. 1 atlas atlas      4466 Jun 12 10:13 pilotlog.txt
2024-06-12 12:13:21 (395321): Guest Log: -rw-------. 1 atlas atlas   3117175 Jun 12 10:13 log.38921007._029031.job.log.1
2024-06-12 12:13:21 (395321): Guest Log: -rw-------. 1 atlas atlas       357 Jun 12 10:13 output.list
2024-06-12 12:13:21 (395321): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun 12 10:13 runtime_log
2024-06-12 12:13:21 (395321): Guest Log: -rw-------. 1 atlas atlas   3676160 Jun 12 10:13 result.tar.gz
2024-06-12 12:13:21 (395321): Guest Log: -rw-------. 1 atlas atlas       676 Jun 12 10:13 VChNDmGPxa5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmDoZKDmbcQRJm.diag
2024-06-12 12:13:21 (395321): Guest Log: -rw-r--r--. 1 atlas atlas     11015 Jun 12 10:13 runtime_log.err
2024-06-12 12:13:21 (395321): Guest Log: Looking for outputfile HITS.38921007._029031.pool.root.1
2024-06-12 12:13:21 (395321): Guest Log: HITS file was successfully produced
2024-06-12 12:13:21 (395321): Guest Log: -rw-------. 1 atlas atlas 356245526 Jun 12 10:11 /home/atlas/RunAtlas/HITS.38921007._029031.pool.root.1
2024-06-12 12:13:22 (395321): Guest Log: Successfully finished the ATLAS job!
2024-06-12 12:13:22 (395321): Guest Log: Copying the results back to the shared directory!
2024-06-12 12:13:22 (395321): Guest Log:  *** Contents of shared directory: ***
2024-06-12 12:13:22 (395321): Guest Log: total 575788
2024-06-12 12:13:22 (395321): Guest Log: -rw-r--r--. 1 root root 585412204 Jun 11 22:29 ATLAS.root_0
2024-06-12 12:13:22 (395321): Guest Log: -rw-r--r--. 1 root root      6647 Jun 11 22:29 init_data.xml
2024-06-12 12:13:22 (395321): Guest Log: -rw-r--r--. 1 root root    482054 Jun 11 22:29 input.tar.gz
2024-06-12 12:13:22 (395321): Guest Log: -rw-r--r--. 1 root root   3676160 Jun 12 10:13 result.tar.gz
2024-06-12 12:13:22 (395321): Guest Log: -rw-r--r--. 1 root root     17537 Jun 11 22:29 start_atlas.sh
2024-06-12 12:13:22 (395321): Guest Log:  *** Success! Shutting down the machine. ***
2024-06-12 12:13:22 (395321): VM Completion File Detected.
2024-06-12 12:13:22 (395321): Powering off VM.
2024-06-12 12:13:23 (395321): Successfully stopped VM.
2024-06-12 12:13:23 (395321): Deregistering VM. (boinc_ab4e5b81d2a876de, slot#0)
2024-06-12 12:13:23 (395321): Removing network bandwidth throttle group from VM.
2024-06-12 12:13:23 (395321): Removing VM from VirtualBox.
12:13:28 (395321): called boinc_finish(0)

</stderr_txt>
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