Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:39:41 (3505735): wrapper (7.7.26015): starting
22:39:41 (3505735): wrapper: running run_atlas (--nthreads 4)
[2024-06-11 22:39:41] Arguments: --nthreads 4
[2024-06-11 22:39:41] Threads: 4
[2024-06-11 22:39:41] Checking for CVMFS
[2024-06-11 22:39:41] No cvmfs_config command found, will try listing directly
[2024-06-11 22:39:41] CVMFS is ok
[2024-06-11 22:39:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-11 22:39:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-11 22:39:41] Further information can be found at the LHC@home message board.
[2024-06-11 22:39:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-11 22:39:41] Checking for apptainer binary...
[2024-06-11 22:39:41] which: no apptainer in ((null))
[2024-06-11 22:39:41] apptainer is not installed, using version from CVMFS
[2024-06-11 22:39:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-11 22:39:42] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2024-06-11 22:39:42] apptainer works
[2024-06-11 22:39:42] Set ATHENA_PROC_NUMBER=4
[2024-06-11 22:39:42] Set ATHENA_CORE_NUMBER=4
[2024-06-11 22:39:42] Starting ATLAS job with PandaID=6225711250
[2024-06-11 22:39:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-12 09:01:30]  *** The last 200 lines of the pilot log: ***
[2024-06-12 09:01:31] 2024-06-12 07:01:14,548 | INFO     | fitting pss+swap vs Time
[2024-06-12 09:01:31] 2024-06-12 07:01:14,549 | INFO     | model: linear, x: [1718138418.0, 1718138479.0, 1718138540.0, 1718138601.0, 1718138662.0, 1718138723.0, 1718138784.0, 1718138845.0, 1718138906.0, 1718138967.0, 1718
[2024-06-12 09:01:31] 2024-06-12 07:01:14,549 | INFO     | sum of square deviations: 70729549410.0
[2024-06-12 09:01:31] 2024-06-12 07:01:14,555 | INFO     | sum of deviations: 253954923365.0
[2024-06-12 09:01:31] 2024-06-12 07:01:14,555 | INFO     | mean x: 1718157023.0
[2024-06-12 09:01:31] 2024-06-12 07:01:14,555 | INFO     | mean y: 2327378.4549918165
[2024-06-12 09:01:31] 2024-06-12 07:01:14,555 | INFO     | -- intersect: -6166726980.645888
[2024-06-12 09:01:31] 2024-06-12 07:01:14,555 | INFO     | intersect: -6166726980.645888
[2024-06-12 09:01:31] 2024-06-12 07:01:14,555 | INFO     | chi2: 4.614875594141221
[2024-06-12 09:01:31] 2024-06-12 07:01:14,556 | INFO     | model: linear, x: [1718138418.0, 1718138479.0, 1718138540.0, 1718138601.0, 1718138662.0, 1718138723.0, 1718138784.0, 1718138845.0, 1718138906.0, 1718138967.0, 1718
[2024-06-12 09:01:31] 2024-06-12 07:01:14,556 | INFO     | sum of square deviations: 69007312467.5
[2024-06-12 09:01:31] 2024-06-12 07:01:14,561 | INFO     | sum of deviations: 289805084281.0001
[2024-06-12 09:01:31] 2024-06-12 07:01:14,562 | INFO     | mean x: 1718156870.5
[2024-06-12 09:01:31] 2024-06-12 07:01:14,562 | INFO     | mean y: 2330530.6303630364
[2024-06-12 09:01:31] 2024-06-12 07:01:14,562 | INFO     | -- intersect: -7213290232.716125
[2024-06-12 09:01:31] 2024-06-12 07:01:14,562 | INFO     | intersect: -7213290232.716125
[2024-06-12 09:01:31] 2024-06-12 07:01:14,562 | INFO     | chi2: 3.858161011324899
[2024-06-12 09:01:31] 2024-06-12 07:01:14,562 | INFO     | current chi2=3.858161011324899 (change=16.397291051074117 %)
[2024-06-12 09:01:31] 2024-06-12 07:01:14,562 | INFO     | right removable region: 605
[2024-06-12 09:01:31] 2024-06-12 07:01:14,563 | INFO     | model: linear, x: [1718138723.0, 1718138784.0, 1718138845.0, 1718138906.0, 1718138967.0, 1718139028.0, 1718139089.0, 1718139150.0, 1718139211.0, 1718139272.0, 1718
[2024-06-12 09:01:31] 2024-06-12 07:01:14,563 | INFO     | sum of square deviations: 69007312467.5
[2024-06-12 09:01:31] 2024-06-12 07:01:14,568 | INFO     | sum of deviations: 110398009046.99997
[2024-06-12 09:01:31] 2024-06-12 07:01:14,568 | INFO     | mean x: 1718157175.5
[2024-06-12 09:01:31] 2024-06-12 07:01:14,569 | INFO     | mean y: 2340077.0297029703
[2024-06-12 09:01:31] 2024-06-12 07:01:14,569 | INFO     | -- intersect: -2746370525.116265
[2024-06-12 09:01:31] 2024-06-12 07:01:14,569 | INFO     | intersect: -2746370525.116265
[2024-06-12 09:01:31] 2024-06-12 07:01:14,569 | INFO     | chi2: 2.222211784108419
[2024-06-12 09:01:31] 2024-06-12 07:01:14,569 | INFO     | current chi2=2.222211784108419 (change=51.84676729033367 %)
[2024-06-12 09:01:31] 2024-06-12 07:01:14,570 | INFO     | model: linear, x: [1718139028.0, 1718139089.0, 1718139150.0, 1718139211.0, 1718139272.0, 1718139333.0, 1718139394.0, 1718139455.0, 1718139516.0, 1718139577.0, 1718
[2024-06-12 09:01:31] 2024-06-12 07:01:14,570 | INFO     | sum of square deviations: 67313262100.0
[2024-06-12 09:01:31] 2024-06-12 07:01:14,575 | INFO     | sum of deviations: -2437567991.0
[2024-06-12 09:01:31] 2024-06-12 07:01:14,575 | INFO     | mean x: 1718157328.0
[2024-06-12 09:01:31] 2024-06-12 07:01:14,575 | INFO     | mean y: 2350234.472545757
[2024-06-12 09:01:31] 2024-06-12 07:01:14,575 | INFO     | -- intersect: 64568661.801369086
[2024-06-12 09:01:31] 2024-06-12 07:01:14,575 | INFO     | intersect: 64568661.801369086
[2024-06-12 09:01:31] 2024-06-12 07:01:14,576 | INFO     | chi2: 0.8587500221380009
[2024-06-12 09:01:31] 2024-06-12 07:01:14,576 | INFO     | current chi2=0.8587500221380009 (change=61.356067487395535 %)
[2024-06-12 09:01:31] 2024-06-12 07:01:14,576 | INFO     | model: linear, x: [1718139333.0, 1718139394.0, 1718139455.0, 1718139516.0, 1718139577.0, 1718139638.0, 1718139699.0, 1718139760.0, 1718139821.0, 1718139882.0, 1718
[2024-06-12 09:01:31] 2024-06-12 07:01:14,576 | INFO     | sum of square deviations: 65647165745.0
[2024-06-12 09:01:31] 2024-06-12 07:01:14,582 | INFO     | sum of deviations: -18800437076.500004
[2024-06-12 09:01:31] 2024-06-12 07:01:14,582 | INFO     | mean x: 1718157480.5
[2024-06-12 09:01:31] 2024-06-12 07:01:14,582 | INFO     | mean y: 2351727.1560402685
[2024-06-12 09:01:31] 2024-06-12 07:01:14,582 | INFO     | -- intersect: 494408181.2782552
[2024-06-12 09:01:31] 2024-06-12 07:01:14,582 | INFO     | intersect: 494408181.2782552
[2024-06-12 09:01:31] 2024-06-12 07:01:14,583 | INFO     | chi2: 0.8019618563942021
[2024-06-12 09:01:31] 2024-06-12 07:01:14,583 | INFO     | current chi2=0.8019618563942021 (change=6.612886670141233 %)
[2024-06-12 09:01:31] 2024-06-12 07:01:14,583 | INFO     | left removable region: 30
[2024-06-12 09:01:31] 2024-06-12 07:01:14,583 | INFO     | model: linear, x: [1718140248.0, 1718140309.0, 1718140370.0, 1718140431.0, 1718140492.0, 1718140553.0, 1718140614.0, 1718140675.0, 1718140736.0, 1718140797.0, 1718
[2024-06-12 09:01:31] 2024-06-12 07:01:14,583 | INFO     | sum of square deviations: 58949570400.0
[2024-06-12 09:01:31] 2024-06-12 07:01:14,588 | INFO     | sum of deviations: 37929968664.99999
[2024-06-12 09:01:31] 2024-06-12 07:01:14,588 | INFO     | mean x: 1718157755.0
[2024-06-12 09:01:31] 2024-06-12 07:01:14,588 | INFO     | mean y: 2353258.7582608694
[2024-06-12 09:01:31] 2024-06-12 07:01:14,588 | INFO     | -- intersect: -1103162343.2464778
[2024-06-12 09:01:31] 2024-06-12 07:01:14,588 | INFO     | intersect: -1103162343.2464778
[2024-06-12 09:01:31] 2024-06-12 07:01:14,589 | INFO     | chi2: 0.010949941146718366
[2024-06-12 09:01:31] 2024-06-12 07:01:14,589 | INFO     | -- intersect: -1103162343.2464778
[2024-06-12 09:01:31] 2024-06-12 07:01:14,589 | INFO     | current memory leak: 0.64 B/s (using 575 data points, chi2=0.01)
[2024-06-12 09:01:31] 2024-06-12 07:01:14,590 | INFO     | ..............................
[2024-06-12 09:01:31] 2024-06-12 07:01:14,590 | INFO     | . Timing measurements:
[2024-06-12 09:01:31] 2024-06-12 07:01:14,590 | INFO     | . get job = 0 s
[2024-06-12 09:01:31] 2024-06-12 07:01:14,590 | INFO     | . initial setup = 1 s
[2024-06-12 09:01:31] 2024-06-12 07:01:14,590 | INFO     | . payload setup = 5 s
[2024-06-12 09:01:31] 2024-06-12 07:01:14,590 | INFO     | . stage-in = 0 s
[2024-06-12 09:01:31] 2024-06-12 07:01:14,590 | INFO     | . payload execution = 37249 s
[2024-06-12 09:01:31] 2024-06-12 07:01:14,590 | INFO     | . stage-out = 0 s
[2024-06-12 09:01:31] 2024-06-12 07:01:14,590 | INFO     | . log creation = 0 s
[2024-06-12 09:01:31] 2024-06-12 07:01:14,590 | INFO     | ..............................
[2024-06-12 09:01:31] 2024-06-12 07:01:14,651 | INFO     | 
[2024-06-12 09:01:31] 2024-06-12 07:01:14,652 | INFO     | job summary report
[2024-06-12 09:01:31] 2024-06-12 07:01:14,652 | INFO     | --------------------------------------------------
[2024-06-12 09:01:31] 2024-06-12 07:01:14,652 | INFO     | PanDA job id: 6225711250
[2024-06-12 09:01:31] 2024-06-12 07:01:14,652 | INFO     | task id: 38921007
[2024-06-12 09:01:31] 2024-06-12 07:01:14,652 | INFO     | errors: (none)
[2024-06-12 09:01:31] 2024-06-12 07:01:14,652 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-12 09:01:31] 2024-06-12 07:01:14,652 | INFO     | pilot state: finished 
[2024-06-12 09:01:31] 2024-06-12 07:01:14,652 | INFO     | transexitcode: 0
[2024-06-12 09:01:31] 2024-06-12 07:01:14,652 | INFO     | exeerrorcode: 0
[2024-06-12 09:01:31] 2024-06-12 07:01:14,652 | INFO     | exeerrordiag: 
[2024-06-12 09:01:31] 2024-06-12 07:01:14,652 | INFO     | exitcode: 0
[2024-06-12 09:01:31] 2024-06-12 07:01:14,652 | INFO     | exitmsg: OK
[2024-06-12 09:01:31] 2024-06-12 07:01:14,652 | INFO     | cpuconsumptiontime: 146115 s
[2024-06-12 09:01:31] 2024-06-12 07:01:14,652 | INFO     | nevents: 400
[2024-06-12 09:01:31] 2024-06-12 07:01:14,652 | INFO     | neventsw: 0
[2024-06-12 09:01:31] 2024-06-12 07:01:14,652 | INFO     | pid: 3519567
[2024-06-12 09:01:31] 2024-06-12 07:01:14,652 | INFO     | pgrp: 3519567
[2024-06-12 09:01:31] 2024-06-12 07:01:14,652 | INFO     | corecount: 4
[2024-06-12 09:01:31] 2024-06-12 07:01:14,653 | INFO     | event service: False
[2024-06-12 09:01:31] 2024-06-12 07:01:14,653 | INFO     | sizes: {0: 2393427, 5: 2393633, 11: 2393689, 37258: 2435078, 37259: 2444060, 37261: 2444116, 37267: 2444414}
[2024-06-12 09:01:31] 2024-06-12 07:01:14,653 | INFO     | --------------------------------------------------
[2024-06-12 09:01:31] 2024-06-12 07:01:14,653 | INFO     | 
[2024-06-12 09:01:31] 2024-06-12 07:01:14,653 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/1
[2024-06-12 09:01:31] 2024-06-12 07:01:14,673 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-12 09:01:31] 2024-06-12 07:01:14,674 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-12 09:01:31] 2024-06-12 07:01:14,674 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-12 09:01:31] 2024-06-12 07:01:14,674 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-12 09:01:31] 2024-06-12 07:01:14,674 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-12 09:01:31] 2024-06-12 07:01:14,674 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-12 09:01:31] 2024-06-12 07:01:14,674 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-12 09:01:31] 2024-06-12 07:01:14,674 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-12 09:01:31] 2024-06-12 07:01:14,674 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-12 09:01:31] 2024-06-12 07:01:14,675 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-12 09:01:31] 2024-06-12 07:01:14,675 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-12 09:01:31] 2024-06-12 07:01:14,675 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-12 09:01:31] 2024-06-12 07:01:14,675 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-12 09:01:31] 2024-06-12 07:01:14,675 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-12 09:01:31] 2024-06-12 07:01:14,675 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-12 09:01:31] 2024-06-12 07:01:14,675 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-12 09:01:31] 2024-06-12 07:01:14,675 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-12 09:01:31] 2024-06-12 07:01:14,675 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-12 09:01:31] 2024-06-12 07:01:14,675 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-12 09:01:31] 2024-06-12 07:01:14,675 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-12 09:01:31] 2024-06-12 07:01:14,675 | INFO     | job 6225711250 has completed (purged errors)
[2024-06-12 09:01:31] 2024-06-12 07:01:14,676 | INFO     | overall cleanup function is called
[2024-06-12 09:01:31] 2024-06-12 07:01:15,682 | INFO     | --- collectZombieJob: --- 10, [3519567]
[2024-06-12 09:01:31] 2024-06-12 07:01:15,683 | INFO     | zombie collector waiting for pid 3519567
[2024-06-12 09:01:31] 2024-06-12 07:01:15,683 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-12 09:01:31] 2024-06-12 07:01:16,687 | INFO     | collected zombie processes
[2024-06-12 09:01:31] 2024-06-12 07:01:16,688 | INFO     | will now attempt to kill all subprocesses of pid=3519567
[2024-06-12 09:01:31] 2024-06-12 07:01:16,841 | INFO     | process IDs to be killed: [3519567] (in reverse order)
[2024-06-12 09:01:31] 2024-06-12 07:01:16,953 | WARNING  | found no corresponding commands to process id(s)
[2024-06-12 09:01:31] 2024-06-12 07:01:16,954 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-12 09:01:31] 2024-06-12 07:01:16,966 | INFO     | did not find any defunct processes belonging to 3519567
[2024-06-12 09:01:31] 2024-06-12 07:01:16,973 | INFO     | did not find any defunct processes belonging to 3519567
[2024-06-12 09:01:31] 2024-06-12 07:01:16,973 | INFO     | ready for new job
[2024-06-12 09:01:31] 2024-06-12 07:01:16,973 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-12 09:01:31] 2024-06-12 07:01:16,976 | INFO     | *************************************
[2024-06-12 09:01:31] 2024-06-12 07:01:16,976 | INFO     | ***  PanDA Pilot version 3.7.6.8  ***
[2024-06-12 09:01:31] 2024-06-12 07:01:16,976 | INFO     | *************************************
[2024-06-12 09:01:31] 2024-06-12 07:01:16,976 | INFO     | 
[2024-06-12 09:01:31] 2024-06-12 07:01:16,979 | INFO     | architecture information:
[2024-06-12 09:01:31] 2024-06-12 07:01:16,979 | INFO     | executing command: cat /etc/os-release
[2024-06-12 09:01:31] 2024-06-12 07:01:16,993 | INFO     | cat /etc/os-release:
[2024-06-12 09:01:31] NAME="CentOS Linux"
[2024-06-12 09:01:31] VERSION="7 (Core)"
[2024-06-12 09:01:31] ID="centos"
[2024-06-12 09:01:31] ID_LIKE="rhel fedora"
[2024-06-12 09:01:31] VERSION_ID="7"
[2024-06-12 09:01:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-12 09:01:31] ANSI_COLOR="0;31"
[2024-06-12 09:01:31] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-12 09:01:31] HOME_URL="https://www.centos.org/"
[2024-06-12 09:01:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-12 09:01:31] 
[2024-06-12 09:01:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-12 09:01:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-12 09:01:31] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-12 09:01:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-12 09:01:31] 
[2024-06-12 09:01:31] 2024-06-12 07:01:16,993 | INFO     | *************************************
[2024-06-12 09:01:31] 2024-06-12 07:01:17,496 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/1
[2024-06-12 09:01:31] 2024-06-12 07:01:17,516 | INFO     | sufficient remaining disk space (609511014400 B)
[2024-06-12 09:01:31] 2024-06-12 07:01:17,516 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-12 09:01:31] 2024-06-12 07:01:17,517 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-12 09:01:31] 2024-06-12 07:01:17,517 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-12 09:01:31] 2024-06-12 07:01:17,517 | INFO     | found 0 job(s) in 20 queues
[2024-06-12 09:01:31] 2024-06-12 07:01:17,517 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-12 09:01:31] 2024-06-12 07:01:17,517 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-12 09:01:31] 2024-06-12 07:01:17,663 | INFO     | all job control threads have been joined
[2024-06-12 09:01:31] 2024-06-12 07:01:17,731 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-06-12 09:01:31] 2024-06-12 07:01:17,731 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-06-12 09:01:31] 2024-06-12 07:01:17,731 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-12 09:01:31] 2024-06-12 07:01:17,731 | INFO     | will abort loop
[2024-06-12 09:01:31] 2024-06-12 07:01:17,830 | INFO     | all data control threads have been joined
[2024-06-12 09:01:31] 2024-06-12 07:01:18,014 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-12 09:01:31] 2024-06-12 07:01:18,168 | INFO     | all payload control threads have been joined
[2024-06-12 09:01:31] 2024-06-12 07:01:18,522 | INFO     | [job] retrieve thread has finished
[2024-06-12 09:01:31] 2024-06-12 07:01:18,637 | INFO     | [payload] validate_pre thread has finished
[2024-06-12 09:01:31] 2024-06-12 07:01:18,668 | INFO     | [job] control thread has finished
[2024-06-12 09:01:31] 2024-06-12 07:01:18,736 | INFO     | [job] job monitor thread has finished
[2024-06-12 09:01:31] 2024-06-12 07:01:18,792 | INFO     | [payload] execute_payloads thread has finished
[2024-06-12 09:01:31] 2024-06-12 07:01:18,836 | INFO     | [data] control thread has finished
[2024-06-12 09:01:31] 2024-06-12 07:01:19,022 | INFO     | [job] validate thread has finished
[2024-06-12 09:01:31] 2024-06-12 07:01:19,096 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-12 09:01:31] 2024-06-12 07:01:19,174 | INFO     | [payload] control thread has finished
[2024-06-12 09:01:31] 2024-06-12 07:01:19,398 | INFO     | [data] copytool_in thread has finished
[2024-06-12 09:01:31] 2024-06-12 07:01:19,652 | INFO     | [job] create_data_payload thread has finished
[2024-06-12 09:01:31] 2024-06-12 07:01:19,657 | INFO     | [payload] validate_post thread has finished
[2024-06-12 09:01:31] 2024-06-12 07:01:19,661 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-12 09:01:31] 2024-06-12 07:01:19,795 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-12 09:01:31] 2024-06-12 07:01:19,946 | INFO     | [payload] failed_post thread has finished
[2024-06-12 09:01:31] 2024-06-12 07:01:20,020 | INFO     | [data] copytool_out thread has finished
[2024-06-12 09:01:31] 2024-06-12 07:01:20,667 | INFO     | [job] queue monitor thread has finished
[2024-06-12 09:01:31] 2024-06-12 07:01:23,801 | INFO     | [data] queue_monitor thread has finished
[2024-06-12 09:01:31] 2024-06-12 07:01:24,947 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47574005847104)>', '<ExcThread(monitor, started 47574177097472)>']
[2024-06-12 09:01:31] 2024-06-12 07:01:25,555 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-12 09:01:31] 2024-06-12 07:01:25,556 | INFO     | [monitor] control thread has ended
[2024-06-12 09:01:31] 2024-06-12 07:01:29,972 | INFO     | all workflow threads have been joined
[2024-06-12 09:01:31] 2024-06-12 07:01:29,972 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-12 09:01:31] 2024-06-12 07:01:29,973 | INFO     | traces error code: 0
[2024-06-12 09:01:31] 2024-06-12 07:01:29,973 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-12 09:01:31] 2024-06-12 07:01:30,052 [wrapper] ==== pilot stdout END ====
[2024-06-12 09:01:31] 2024-06-12 07:01:30,055 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-12 09:01:31] 2024-06-12 07:01:30,057 [wrapper] pilotpid: 3510060
[2024-06-12 09:01:31] 2024-06-12 07:01:30,059 [wrapper] Pilot exit status: 0
[2024-06-12 09:01:31] 2024-06-12 07:01:30,068 [wrapper] pandaids: 6225711250
[2024-06-12 09:01:31] 2024-06-12 07:01:30,135 [wrapper] cleanup supervisor_pilot  593204 3510061
[2024-06-12 09:01:31] 2024-06-12 07:01:30,137 [wrapper] Test setup, not cleaning
[2024-06-12 09:01:31] 2024-06-12 07:01:30,139 [wrapper] ==== wrapper stdout END ====
[2024-06-12 09:01:31] 2024-06-12 07:01:30,141 [wrapper] ==== wrapper stderr END ====
[2024-06-12 09:01:31] 2024-06-12 07:01:30,145 [wrapper] apfmon messages muted
[2024-06-12 09:01:31]  *** Error codes and diagnostics ***
[2024-06-12 09:01:31]     "exeErrorCode": 0,
[2024-06-12 09:01:31]     "exeErrorDiag": "",
[2024-06-12 09:01:31]     "pilotErrorCode": 0,
[2024-06-12 09:01:31]     "pilotErrorDiag": "",
[2024-06-12 09:01:31]  *** Listing of results directory ***
[2024-06-12 09:01:31] total 924696
[2024-06-12 09:01:31] -rw-r--r-- 1 boinc boinc    469443 Jun 10 09:08 pilot3.tar.gz
[2024-06-12 09:01:31] -rwx------ 1 boinc boinc     32308 Jun 10 09:36 runpilot2-wrapper.sh
[2024-06-12 09:01:31] -rw-r--r-- 1 boinc boinc      5654 Jun 10 09:36 queuedata.json
[2024-06-12 09:01:31] -rw-r--r-- 1 boinc boinc       100 Jun 11 22:39 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-12 09:01:31] -rwxr-xr-x 1 boinc boinc      7986 Jun 11 22:39 run_atlas
[2024-06-12 09:01:31] -rw-r--r-- 1 boinc boinc       105 Jun 11 22:39 job.xml
[2024-06-12 09:01:31] -rw-r--r-- 1 boinc boinc      6663 Jun 11 22:39 init_data.xml
[2024-06-12 09:01:31] -rw-r--r-- 2 boinc boinc 585232631 Jun 11 22:39 EVNT.38776201._000601.pool.root.1
[2024-06-12 09:01:31] -rw-r--r-- 2 boinc boinc     17537 Jun 11 22:39 start_atlas.sh
[2024-06-12 09:01:31] drwxrwx--x 2 boinc boinc      4096 Jun 11 22:39 shared
[2024-06-12 09:01:31] -rw-r--r-- 2 boinc boinc    482052 Jun 11 22:39 input.tar.gz
[2024-06-12 09:01:31] -rw-r--r-- 1 boinc boinc         0 Jun 11 22:39 boinc_lockfile
[2024-06-12 09:01:31] -rw-r--r-- 1 boinc boinc      2629 Jun 11 22:39 pandaJob.out
[2024-06-12 09:01:31] -rw------- 1 boinc boinc       424 Jun 11 22:39 setup.sh.local
[2024-06-12 09:01:31] -rw------- 1 boinc boinc   1022738 Jun 11 22:39 agis_schedconf.cvmfs.json
[2024-06-12 09:01:31] -rw------- 1 boinc boinc   1324173 Jun 11 22:39 cric_ddmendpoints.json
[2024-06-12 09:01:31] drwx------ 4 boinc boinc      4096 Jun 11 22:39 pilot3
[2024-06-12 09:01:31] -rw------- 1 boinc boinc 348120048 Jun 12 09:00 HITS.38921007._027178.pool.root.1
[2024-06-12 09:01:31] -rw-r--r-- 1 boinc boinc       533 Jun 12 09:00 boinc_task_state.xml
[2024-06-12 09:01:31] -rw------- 1 boinc boinc        95 Jun 12 09:00 pilot_heartbeat.json
[2024-06-12 09:01:31] -rw------- 1 boinc boinc      1063 Jun 12 09:01 memory_monitor_summary.json
[2024-06-12 09:01:31] -rw-r--r-- 1 boinc boinc      8192 Jun 12 09:01 boinc_mmap_file
[2024-06-12 09:01:31] -rw-r--r-- 1 boinc boinc        29 Jun 12 09:01 wrapper_checkpoint.txt
[2024-06-12 09:01:31] -rw------- 1 boinc boinc         0 Jun 12 09:01 agis_ddmendpoints.agis.ALL.json
[2024-06-12 09:01:31] -rw------- 1 boinc boinc    585010 Jun 12 09:01 log.38921007._027178.job.log.tgz.1
[2024-06-12 09:01:31] -rw------- 1 boinc boinc      7767 Jun 12 09:01 heartbeat.json
[2024-06-12 09:01:31] -rw------- 1 boinc boinc      4530 Jun 12 09:01 pilotlog.txt
[2024-06-12 09:01:31] -rw------- 1 boinc boinc   4414179 Jun 12 09:01 log.38921007._027178.job.log.1
[2024-06-12 09:01:31] -rw------- 1 boinc boinc       357 Jun 12 09:01 output.list
[2024-06-12 09:01:31] -rw-r--r-- 1 boinc boinc       620 Jun 12 09:01 runtime_log
[2024-06-12 09:01:31] -rw------- 1 boinc boinc   5017600 Jun 12 09:01 result.tar.gz
[2024-06-12 09:01:31] -rw------- 1 boinc boinc       662 Jun 12 09:01 zlNODm7koa5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmNLZKDmrx6Mym.diag
[2024-06-12 09:01:31] -rw-r--r-- 1 boinc boinc     11410 Jun 12 09:01 runtime_log.err
[2024-06-12 09:01:31] -rw-r--r-- 1 boinc boinc     21358 Jun 12 09:01 stderr.txt
[2024-06-12 09:01:31] HITS file was successfully produced:
[2024-06-12 09:01:31] -rw------- 1 boinc boinc 348120048 Jun 12 09:00 shared/HITS.pool.root.1
[2024-06-12 09:01:31]  *** Contents of shared directory: ***
[2024-06-12 09:01:31] total 916884
[2024-06-12 09:01:31] -rw-r--r-- 2 boinc boinc 585232631 Jun 11 22:39 ATLAS.root_0
[2024-06-12 09:01:31] -rw-r--r-- 2 boinc boinc     17537 Jun 11 22:39 start_atlas.sh
[2024-06-12 09:01:31] -rw-r--r-- 2 boinc boinc    482052 Jun 11 22:39 input.tar.gz
[2024-06-12 09:01:31] -rw------- 1 boinc boinc 348120048 Jun 12 09:00 HITS.pool.root.1
[2024-06-12 09:01:31] -rw------- 1 boinc boinc   5017600 Jun 12 09:01 result.tar.gz
09:01:32 (3505735): run_atlas exited; CPU time 145345.238835
09:01:32 (3505735): called boinc_finish(0)

</stderr_txt>
]]>

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