Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:05:20 (1813642): wrapper (7.7.26015): starting
23:05:20 (1813642): wrapper: running run_atlas (--nthreads 4)
[2024-06-12 23:05:20] Arguments: --nthreads 4
[2024-06-12 23:05:20] Threads: 4
[2024-06-12 23:05:20] Checking for CVMFS
[2024-06-12 23:05:20] No cvmfs_config command found, will try listing directly
[2024-06-12 23:05:20] CVMFS is ok
[2024-06-12 23:05:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-12 23:05:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-12 23:05:20] Further information can be found at the LHC@home message board.
[2024-06-12 23:05:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-12 23:05:20] Checking for apptainer binary...
[2024-06-12 23:05:20] which: no apptainer in ((null))
[2024-06-12 23:05:20] apptainer is not installed, using version from CVMFS
[2024-06-12 23:05:20] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-12 23:05:21] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2024-06-12 23:05:21] apptainer works
[2024-06-12 23:05:21] Set ATHENA_PROC_NUMBER=4
[2024-06-12 23:05:21] Set ATHENA_CORE_NUMBER=4
[2024-06-12 23:05:21] Starting ATLAS job with PandaID=6224822605
[2024-06-12 23:05:21] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-13 07:04:41]  *** The last 200 lines of the pilot log: ***
[2024-06-13 07:04:41] 2024-06-13 05:04:23,246 | INFO     | fitting pss+swap vs Time
[2024-06-13 07:04:41] 2024-06-13 05:04:23,247 | INFO     | model: linear, x: [1718226355.0, 1718226416.0, 1718226477.0, 1718226538.0, 1718226599.0, 1718226660.0, 1718226721.0, 1718226782.0, 1718226843.0, 1718226904.0, 1718
[2024-06-13 07:04:41] 2024-06-13 05:04:23,247 | INFO     | sum of square deviations: 32399565620.0
[2024-06-13 07:04:41] 2024-06-13 05:04:23,253 | INFO     | sum of deviations: 228439013948.00003
[2024-06-13 07:04:41] 2024-06-13 05:04:23,253 | INFO     | mean x: 1718240690.0
[2024-06-13 07:04:41] 2024-06-13 05:04:23,253 | INFO     | mean y: 2315285.016985138
[2024-06-13 07:04:41] 2024-06-13 05:04:23,253 | INFO     | -- intersect: -12112452349.603273
[2024-06-13 07:04:41] 2024-06-13 05:04:23,253 | INFO     | intersect: -12112452349.603273
[2024-06-13 07:04:41] 2024-06-13 05:04:23,254 | INFO     | chi2: 5.075050383392213
[2024-06-13 07:04:41] 2024-06-13 05:04:23,255 | INFO     | model: linear, x: [1718226355.0, 1718226416.0, 1718226477.0, 1718226538.0, 1718226599.0, 1718226660.0, 1718226721.0, 1718226782.0, 1718226843.0, 1718226904.0, 1718
[2024-06-13 07:04:41] 2024-06-13 05:04:23,255 | INFO     | sum of square deviations: 31378644152.5
[2024-06-13 07:04:41] 2024-06-13 05:04:23,261 | INFO     | sum of deviations: 255596248748.50003
[2024-06-13 07:04:41] 2024-06-13 05:04:23,261 | INFO     | mean x: 1718240537.5
[2024-06-13 07:04:41] 2024-06-13 05:04:23,261 | INFO     | mean y: 2319302.9635193134
[2024-06-13 07:04:41] 2024-06-13 05:04:23,261 | INFO     | -- intersect: -13993691286.219835
[2024-06-13 07:04:41] 2024-06-13 05:04:23,262 | INFO     | intersect: -13993691286.219835
[2024-06-13 07:04:41] 2024-06-13 05:04:23,262 | INFO     | chi2: 4.282300244494274
[2024-06-13 07:04:41] 2024-06-13 05:04:23,262 | INFO     | current chi2=4.282300244494274 (change=15.62053731510065 %)
[2024-06-13 07:04:41] 2024-06-13 05:04:23,262 | INFO     | right removable region: 465
[2024-06-13 07:04:41] 2024-06-13 05:04:23,263 | INFO     | model: linear, x: [1718226660.0, 1718226721.0, 1718226782.0, 1718226843.0, 1718226904.0, 1718226965.0, 1718227026.0, 1718227087.0, 1718227148.0, 1718227209.0, 1718
[2024-06-13 07:04:41] 2024-06-13 05:04:23,263 | INFO     | sum of square deviations: 31378644152.5
[2024-06-13 07:04:41] 2024-06-13 05:04:23,269 | INFO     | sum of deviations: 114529091337.50008
[2024-06-13 07:04:41] 2024-06-13 05:04:23,269 | INFO     | mean x: 1718240842.5
[2024-06-13 07:04:41] 2024-06-13 05:04:23,269 | INFO     | mean y: 2332280.847639485
[2024-06-13 07:04:41] 2024-06-13 05:04:23,269 | INFO     | -- intersect: -6269084719.648447
[2024-06-13 07:04:41] 2024-06-13 05:04:23,270 | INFO     | intersect: -6269084719.648447
[2024-06-13 07:04:41] 2024-06-13 05:04:23,270 | INFO     | chi2: 2.5292265382907364
[2024-06-13 07:04:41] 2024-06-13 05:04:23,270 | INFO     | current chi2=2.5292265382907364 (change=50.16351864077107 %)
[2024-06-13 07:04:41] 2024-06-13 05:04:23,271 | INFO     | model: linear, x: [1718226965.0, 1718227026.0, 1718227087.0, 1718227148.0, 1718227209.0, 1718227270.0, 1718227331.0, 1718227392.0, 1718227453.0, 1718227514.0, 1718
[2024-06-13 07:04:41] 2024-06-13 05:04:23,271 | INFO     | sum of square deviations: 30379397510.0
[2024-06-13 07:04:41] 2024-06-13 05:04:23,277 | INFO     | sum of deviations: 19446305473.00001
[2024-06-13 07:04:41] 2024-06-13 05:04:23,277 | INFO     | mean x: 1718240995.0
[2024-06-13 07:04:41] 2024-06-13 05:04:23,277 | INFO     | mean y: 2346793.1561822128
[2024-06-13 07:04:41] 2024-06-13 05:04:23,277 | INFO     | -- intersect: -1097524896.3334715
[2024-06-13 07:04:41] 2024-06-13 05:04:23,277 | INFO     | intersect: -1097524896.3334715
[2024-06-13 07:04:41] 2024-06-13 05:04:23,278 | INFO     | chi2: 0.8865863636687938
[2024-06-13 07:04:41] 2024-06-13 05:04:23,278 | INFO     | current chi2=0.8865863636687938 (change=64.94634425795827 %)
[2024-06-13 07:04:41] 2024-06-13 05:04:23,279 | INFO     | model: linear, x: [1718227270.0, 1718227331.0, 1718227392.0, 1718227453.0, 1718227514.0, 1718227575.0, 1718227636.0, 1718227697.0, 1718227758.0, 1718227819.0, 1718
[2024-06-13 07:04:41] 2024-06-13 05:04:23,279 | INFO     | sum of square deviations: 29401593130.0
[2024-06-13 07:04:41] 2024-06-13 05:04:23,284 | INFO     | sum of deviations: 3611794506.0
[2024-06-13 07:04:41] 2024-06-13 05:04:23,285 | INFO     | mean x: 1718241147.5
[2024-06-13 07:04:41] 2024-06-13 05:04:23,285 | INFO     | mean y: 2349252.8640350876
[2024-06-13 07:04:41] 2024-06-13 05:04:23,285 | INFO     | -- intersect: -208725497.71440867
[2024-06-13 07:04:41] 2024-06-13 05:04:23,285 | INFO     | intersect: -208725497.71440867
[2024-06-13 07:04:41] 2024-06-13 05:04:23,286 | INFO     | chi2: 0.8206412294580866
[2024-06-13 07:04:41] 2024-06-13 05:04:23,286 | INFO     | current chi2=0.8206412294580866 (change=7.438094799678498 %)
[2024-06-13 07:04:41] 2024-06-13 05:04:23,286 | INFO     | left removable region: 30
[2024-06-13 07:04:41] 2024-06-13 05:04:23,286 | INFO     | model: linear, x: [1718228185.0, 1718228246.0, 1718228307.0, 1718228368.0, 1718228429.0, 1718228490.0, 1718228551.0, 1718228612.0, 1718228673.0, 1718228734.0, 1718
[2024-06-13 07:04:41] 2024-06-13 05:04:23,287 | INFO     | sum of square deviations: 25523715770.0
[2024-06-13 07:04:41] 2024-06-13 05:04:23,292 | INFO     | sum of deviations: 21789882529.000004
[2024-06-13 07:04:41] 2024-06-13 05:04:23,292 | INFO     | mean x: 1718241422.0
[2024-06-13 07:04:41] 2024-06-13 05:04:23,292 | INFO     | mean y: 2355472.5540229883
[2024-06-13 07:04:41] 2024-06-13 05:04:23,292 | INFO     | -- intersect: -1464526508.0801754
[2024-06-13 07:04:41] 2024-06-13 05:04:23,292 | INFO     | intersect: -1464526508.0801754
[2024-06-13 07:04:41] 2024-06-13 05:04:23,293 | INFO     | chi2: 0.0010428620379875342
[2024-06-13 07:04:41] 2024-06-13 05:04:23,293 | INFO     | -- intersect: -1464526508.0801754
[2024-06-13 07:04:41] 2024-06-13 05:04:23,293 | INFO     | current memory leak: 0.85 B/s (using 435 data points, chi2=0.00)
[2024-06-13 07:04:41] 2024-06-13 05:04:23,294 | INFO     | ..............................
[2024-06-13 07:04:41] 2024-06-13 05:04:23,294 | INFO     | . Timing measurements:
[2024-06-13 07:04:41] 2024-06-13 05:04:23,294 | INFO     | . get job = 0 s
[2024-06-13 07:04:41] 2024-06-13 05:04:23,294 | INFO     | . initial setup = 1 s
[2024-06-13 07:04:41] 2024-06-13 05:04:23,294 | INFO     | . payload setup = 5 s
[2024-06-13 07:04:41] 2024-06-13 05:04:23,294 | INFO     | . stage-in = 0 s
[2024-06-13 07:04:41] 2024-06-13 05:04:23,294 | INFO     | . payload execution = 28701 s
[2024-06-13 07:04:41] 2024-06-13 05:04:23,294 | INFO     | . stage-out = 1 s
[2024-06-13 07:04:41] 2024-06-13 05:04:23,294 | INFO     | . log creation = 0 s
[2024-06-13 07:04:41] 2024-06-13 05:04:23,294 | INFO     | ..............................
[2024-06-13 07:04:41] 2024-06-13 05:04:23,400 | INFO     | 
[2024-06-13 07:04:41] 2024-06-13 05:04:23,400 | INFO     | job summary report
[2024-06-13 07:04:41] 2024-06-13 05:04:23,400 | INFO     | --------------------------------------------------
[2024-06-13 07:04:41] 2024-06-13 05:04:23,400 | INFO     | PanDA job id: 6224822605
[2024-06-13 07:04:41] 2024-06-13 05:04:23,400 | INFO     | task id: 38921001
[2024-06-13 07:04:41] 2024-06-13 05:04:23,400 | INFO     | errors: (none)
[2024-06-13 07:04:41] 2024-06-13 05:04:23,400 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-13 07:04:41] 2024-06-13 05:04:23,401 | INFO     | pilot state: finished 
[2024-06-13 07:04:41] 2024-06-13 05:04:23,401 | INFO     | transexitcode: 0
[2024-06-13 07:04:41] 2024-06-13 05:04:23,401 | INFO     | exeerrorcode: 0
[2024-06-13 07:04:41] 2024-06-13 05:04:23,401 | INFO     | exeerrordiag: 
[2024-06-13 07:04:41] 2024-06-13 05:04:23,401 | INFO     | exitcode: 0
[2024-06-13 07:04:41] 2024-06-13 05:04:23,401 | INFO     | exitmsg: OK
[2024-06-13 07:04:41] 2024-06-13 05:04:23,401 | INFO     | cpuconsumptiontime: 112067 s
[2024-06-13 07:04:41] 2024-06-13 05:04:23,401 | INFO     | nevents: 400
[2024-06-13 07:04:41] 2024-06-13 05:04:23,401 | INFO     | neventsw: 0
[2024-06-13 07:04:41] 2024-06-13 05:04:23,401 | INFO     | pid: 1828223
[2024-06-13 07:04:41] 2024-06-13 05:04:23,401 | INFO     | pgrp: 1828223
[2024-06-13 07:04:41] 2024-06-13 05:04:23,401 | INFO     | corecount: 4
[2024-06-13 07:04:41] 2024-06-13 05:04:23,401 | INFO     | event service: False
[2024-06-13 07:04:41] 2024-06-13 05:04:23,401 | INFO     | sizes: {0: 2393343, 1: 2393457, 4: 2393691, 11: 2393719, 28710: 2431020, 28713: 2440002, 28714: 2440186, 28718: 2440356}
[2024-06-13 07:04:41] 2024-06-13 05:04:23,401 | INFO     | --------------------------------------------------
[2024-06-13 07:04:41] 2024-06-13 05:04:23,402 | INFO     | 
[2024-06-13 07:04:41] 2024-06-13 05:04:23,402 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/1
[2024-06-13 07:04:41] 2024-06-13 05:04:23,427 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-13 07:04:41] 2024-06-13 05:04:23,427 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-13 07:04:41] 2024-06-13 05:04:23,427 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-13 07:04:41] 2024-06-13 05:04:23,427 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-13 07:04:41] 2024-06-13 05:04:23,427 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-13 07:04:41] 2024-06-13 05:04:23,427 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-13 07:04:41] 2024-06-13 05:04:23,427 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-13 07:04:41] 2024-06-13 05:04:23,427 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-13 07:04:41] 2024-06-13 05:04:23,428 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-13 07:04:41] 2024-06-13 05:04:23,428 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-13 07:04:41] 2024-06-13 05:04:23,428 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-13 07:04:41] 2024-06-13 05:04:23,428 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-13 07:04:41] 2024-06-13 05:04:23,428 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-13 07:04:41] 2024-06-13 05:04:23,428 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-13 07:04:41] 2024-06-13 05:04:23,428 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-13 07:04:41] 2024-06-13 05:04:23,428 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-13 07:04:41] 2024-06-13 05:04:23,428 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-13 07:04:41] 2024-06-13 05:04:23,428 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-13 07:04:41] 2024-06-13 05:04:23,428 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-13 07:04:41] 2024-06-13 05:04:23,428 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-13 07:04:41] 2024-06-13 05:04:23,428 | INFO     | job 6224822605 has completed (purged errors)
[2024-06-13 07:04:41] 2024-06-13 05:04:23,428 | INFO     | overall cleanup function is called
[2024-06-13 07:04:41] 2024-06-13 05:04:24,435 | INFO     | --- collectZombieJob: --- 10, [1828223]
[2024-06-13 07:04:41] 2024-06-13 05:04:24,435 | INFO     | zombie collector waiting for pid 1828223
[2024-06-13 07:04:41] 2024-06-13 05:04:24,435 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-13 07:04:41] 2024-06-13 05:04:25,441 | INFO     | collected zombie processes
[2024-06-13 07:04:41] 2024-06-13 05:04:25,441 | INFO     | will now attempt to kill all subprocesses of pid=1828223
[2024-06-13 07:04:41] 2024-06-13 05:04:25,694 | INFO     | process IDs to be killed: [1828223] (in reverse order)
[2024-06-13 07:04:41] 2024-06-13 05:04:25,848 | WARNING  | found no corresponding commands to process id(s)
[2024-06-13 07:04:41] 2024-06-13 05:04:25,848 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-13 07:04:41] 2024-06-13 05:04:25,861 | INFO     | did not find any defunct processes belonging to 1828223
[2024-06-13 07:04:41] 2024-06-13 05:04:25,869 | INFO     | did not find any defunct processes belonging to 1828223
[2024-06-13 07:04:41] 2024-06-13 05:04:25,869 | INFO     | ready for new job
[2024-06-13 07:04:41] 2024-06-13 05:04:25,870 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-13 07:04:41] 2024-06-13 05:04:25,872 | INFO     | *************************************
[2024-06-13 07:04:41] 2024-06-13 05:04:25,872 | INFO     | ***  PanDA Pilot version 3.7.6.8  ***
[2024-06-13 07:04:41] 2024-06-13 05:04:25,872 | INFO     | *************************************
[2024-06-13 07:04:41] 2024-06-13 05:04:25,872 | INFO     | 
[2024-06-13 07:04:41] 2024-06-13 05:04:25,877 | INFO     | architecture information:
[2024-06-13 07:04:41] 2024-06-13 05:04:25,877 | INFO     | executing command: cat /etc/os-release
[2024-06-13 07:04:41] 2024-06-13 05:04:25,899 | INFO     | cat /etc/os-release:
[2024-06-13 07:04:41] NAME="CentOS Linux"
[2024-06-13 07:04:41] VERSION="7 (Core)"
[2024-06-13 07:04:41] ID="centos"
[2024-06-13 07:04:41] ID_LIKE="rhel fedora"
[2024-06-13 07:04:41] VERSION_ID="7"
[2024-06-13 07:04:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-13 07:04:41] ANSI_COLOR="0;31"
[2024-06-13 07:04:41] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-13 07:04:41] HOME_URL="https://www.centos.org/"
[2024-06-13 07:04:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-13 07:04:41] 
[2024-06-13 07:04:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-13 07:04:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-13 07:04:41] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-13 07:04:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-13 07:04:41] 
[2024-06-13 07:04:41] 2024-06-13 05:04:25,899 | INFO     | *************************************
[2024-06-13 07:04:41] 2024-06-13 05:04:26,401 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/1
[2024-06-13 07:04:41] 2024-06-13 05:04:26,422 | INFO     | sufficient remaining disk space (3165585932288 B)
[2024-06-13 07:04:41] 2024-06-13 05:04:26,423 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-13 07:04:41] 2024-06-13 05:04:26,423 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-13 07:04:41] 2024-06-13 05:04:26,423 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-13 07:04:41] 2024-06-13 05:04:26,424 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-13 07:04:41] 2024-06-13 05:04:26,425 | INFO     | found 0 job(s) in 20 queues
[2024-06-13 07:04:41] 2024-06-13 05:04:26,425 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-13 07:04:41] 2024-06-13 05:04:26,425 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-13 07:04:41] 2024-06-13 05:04:26,433 | INFO     | all data control threads have been joined
[2024-06-13 07:04:41] 2024-06-13 05:04:26,625 | INFO     | all payload control threads have been joined
[2024-06-13 07:04:41] 2024-06-13 05:04:26,751 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-06-13 07:04:41] 2024-06-13 05:04:26,751 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-06-13 07:04:41] 2024-06-13 05:04:26,752 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-13 07:04:41] 2024-06-13 05:04:26,752 | INFO     | will abort loop
[2024-06-13 07:04:41] 2024-06-13 05:04:27,177 | INFO     | all job control threads have been joined
[2024-06-13 07:04:41] 2024-06-13 05:04:27,429 | INFO     | [job] retrieve thread has finished
[2024-06-13 07:04:41] 2024-06-13 05:04:27,438 | INFO     | [data] control thread has finished
[2024-06-13 07:04:41] 2024-06-13 05:04:27,528 | INFO     | [job] validate thread has finished
[2024-06-13 07:04:41] 2024-06-13 05:04:27,630 | INFO     | [payload] control thread has finished
[2024-06-13 07:04:41] 2024-06-13 05:04:27,674 | INFO     | [payload] validate_post thread has finished
[2024-06-13 07:04:41] 2024-06-13 05:04:27,757 | INFO     | [job] job monitor thread has finished
[2024-06-13 07:04:41] 2024-06-13 05:04:28,056 | INFO     | [job] create_data_payload thread has finished
[2024-06-13 07:04:41] 2024-06-13 05:04:28,134 | INFO     | [payload] failed_post thread has finished
[2024-06-13 07:04:41] 2024-06-13 05:04:28,183 | INFO     | [job] control thread has finished
[2024-06-13 07:04:41] 2024-06-13 05:04:28,356 | INFO     | [payload] validate_pre thread has finished
[2024-06-13 07:04:41] 2024-06-13 05:04:28,357 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-13 07:04:41] 2024-06-13 05:04:28,361 | INFO     | [payload] execute_payloads thread has finished
[2024-06-13 07:04:41] 2024-06-13 05:04:28,410 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-13 07:04:41] 2024-06-13 05:04:28,429 | INFO     | [data] copytool_out thread has finished
[2024-06-13 07:04:41] 2024-06-13 05:04:28,875 | INFO     | [data] copytool_in thread has finished
[2024-06-13 07:04:41] 2024-06-13 05:04:29,276 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-13 07:04:41] 2024-06-13 05:04:29,415 | INFO     | [job] queue monitor thread has finished
[2024-06-13 07:04:41] 2024-06-13 05:04:33,286 | INFO     | [data] queue_monitor thread has finished
[2024-06-13 07:04:41] 2024-06-13 05:04:35,025 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47651832771648)>', '<ExcThread(monitor, started 47652077078272)>']
[2024-06-13 07:04:41] 2024-06-13 05:04:35,470 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-13 07:04:41] 2024-06-13 05:04:35,470 | INFO     | [monitor] control thread has ended
[2024-06-13 07:04:41] 2024-06-13 05:04:40,050 | INFO     | all workflow threads have been joined
[2024-06-13 07:04:41] 2024-06-13 05:04:40,050 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-13 07:04:41] 2024-06-13 05:04:40,051 | INFO     | traces error code: 0
[2024-06-13 07:04:41] 2024-06-13 05:04:40,051 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-13 07:04:41] 2024-06-13 05:04:40,131 [wrapper] ==== pilot stdout END ====
[2024-06-13 07:04:41] 2024-06-13 05:04:40,135 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-13 07:04:41] 2024-06-13 05:04:40,138 [wrapper] pilotpid: 1818351
[2024-06-13 07:04:41] 2024-06-13 05:04:40,141 [wrapper] Pilot exit status: 0
[2024-06-13 07:04:41] 2024-06-13 05:04:40,153 [wrapper] pandaids: 6224822605
[2024-06-13 07:04:41] 2024-06-13 05:04:40,249 [wrapper] cleanup supervisor_pilot  347607 1818352
[2024-06-13 07:04:41] 2024-06-13 05:04:40,253 [wrapper] Test setup, not cleaning
[2024-06-13 07:04:41] 2024-06-13 05:04:40,255 [wrapper] ==== wrapper stdout END ====
[2024-06-13 07:04:41] 2024-06-13 05:04:40,257 [wrapper] ==== wrapper stderr END ====
[2024-06-13 07:04:41] 2024-06-13 05:04:40,262 [wrapper] apfmon messages muted
[2024-06-13 07:04:41]  *** Error codes and diagnostics ***
[2024-06-13 07:04:41]     "exeErrorCode": 0,
[2024-06-13 07:04:41]     "exeErrorDiag": "",
[2024-06-13 07:04:41]     "pilotErrorCode": 0,
[2024-06-13 07:04:41]     "pilotErrorDiag": "",
[2024-06-13 07:04:41]  *** Listing of results directory ***
[2024-06-13 07:04:41] total 949920
[2024-06-13 07:04:41] -rw-r--r-- 1 boinc boinc    469443 Jun  8 22:49 pilot3.tar.gz
[2024-06-13 07:04:41] -rw-r--r-- 1 boinc boinc      5654 Jun  8 23:05 queuedata.json
[2024-06-13 07:04:41] -rwx------ 1 boinc boinc     32308 Jun  8 23:07 runpilot2-wrapper.sh
[2024-06-13 07:04:41] -rw-r--r-- 1 boinc boinc       100 Jun 12 22:26 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-13 07:04:41] -rwxr-xr-x 1 boinc boinc      7986 Jun 12 22:26 run_atlas
[2024-06-13 07:04:41] -rw-r--r-- 1 boinc boinc       105 Jun 12 22:26 job.xml
[2024-06-13 07:04:41] -rw-r--r-- 1 boinc boinc      6644 Jun 12 23:05 init_data.xml
[2024-06-13 07:04:41] -rw-r--r-- 2 boinc boinc 614528983 Jun 12 23:05 EVNT.38776190._000949.pool.root.1
[2024-06-13 07:04:41] -rw-r--r-- 2 boinc boinc     17537 Jun 12 23:05 start_atlas.sh
[2024-06-13 07:04:41] drwxrwx--x 2 boinc boinc      4096 Jun 12 23:05 shared
[2024-06-13 07:04:41] -rw-r--r-- 2 boinc boinc    482026 Jun 12 23:05 input.tar.gz
[2024-06-13 07:04:41] -rw-r--r-- 1 boinc boinc         0 Jun 12 23:05 boinc_lockfile
[2024-06-13 07:04:41] -rw-r--r-- 1 boinc boinc      2656 Jun 12 23:05 pandaJob.out
[2024-06-13 07:04:41] -rw------- 1 boinc boinc       424 Jun 12 23:05 setup.sh.local
[2024-06-13 07:04:41] -rw------- 1 boinc boinc   1026730 Jun 12 23:05 agis_schedconf.cvmfs.json
[2024-06-13 07:04:41] -rw------- 1 boinc boinc   1324173 Jun 12 23:05 cric_ddmendpoints.json
[2024-06-13 07:04:41] drwx------ 4 boinc boinc      4096 Jun 12 23:05 pilot3
[2024-06-13 07:04:41] -rw------- 1 boinc boinc 346855614 Jun 13 07:03 HITS.38921001._049736.pool.root.1
[2024-06-13 07:04:41] -rw-r--r-- 1 boinc boinc       532 Jun 13 07:03 boinc_task_state.xml
[2024-06-13 07:04:41] -rw------- 1 boinc boinc        95 Jun 13 07:03 pilot_heartbeat.json
[2024-06-13 07:04:41] -rw------- 1 boinc boinc      1041 Jun 13 07:04 memory_monitor_summary.json
[2024-06-13 07:04:41] -rw------- 1 boinc boinc         0 Jun 13 07:04 agis_ddmendpoints.agis.ALL.json
[2024-06-13 07:04:41] -rw------- 1 boinc boinc    500673 Jun 13 07:04 log.38921001._049736.job.log.tgz.1
[2024-06-13 07:04:41] -rw------- 1 boinc boinc      7721 Jun 13 07:04 heartbeat.json
[2024-06-13 07:04:41] -rw-r--r-- 1 boinc boinc        29 Jun 13 07:04 wrapper_checkpoint.txt
[2024-06-13 07:04:41] -rw-r--r-- 1 boinc boinc      8192 Jun 13 07:04 boinc_mmap_file
[2024-06-13 07:04:41] -rw------- 1 boinc boinc      4531 Jun 13 07:04 pilotlog.txt
[2024-06-13 07:04:41] -rw------- 1 boinc boinc   3400505 Jun 13 07:04 log.38921001._049736.job.log.1
[2024-06-13 07:04:41] -rw------- 1 boinc boinc       357 Jun 13 07:04 output.list
[2024-06-13 07:04:41] -rw-r--r-- 1 boinc boinc       620 Jun 13 07:04 runtime_log
[2024-06-13 07:04:41] -rw------- 1 boinc boinc   3921920 Jun 13 07:04 result.tar.gz
[2024-06-13 07:04:41] -rw-r--r-- 1 boinc boinc     11410 Jun 13 07:04 runtime_log.err
[2024-06-13 07:04:41] -rw------- 1 boinc boinc       661 Jun 13 07:04 PmsNDmSSIa5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmRVXKDmpMzMmn.diag
[2024-06-13 07:04:41] -rw-r--r-- 1 boinc boinc      4383 Jun 13 07:04 stderr.txt
[2024-06-13 07:04:41] HITS file was successfully produced:
[2024-06-13 07:04:41] -rw------- 1 boinc boinc 346855614 Jun 13 07:03 shared/HITS.pool.root.1
[2024-06-13 07:04:41]  *** Contents of shared directory: ***
[2024-06-13 07:04:41] total 943188
[2024-06-13 07:04:41] -rw-r--r-- 2 boinc boinc 614528983 Jun 12 23:05 ATLAS.root_0
[2024-06-13 07:04:41] -rw-r--r-- 2 boinc boinc     17537 Jun 12 23:05 start_atlas.sh
[2024-06-13 07:04:41] -rw-r--r-- 2 boinc boinc    482026 Jun 12 23:05 input.tar.gz
[2024-06-13 07:04:41] -rw------- 1 boinc boinc 346855614 Jun 13 07:03 HITS.pool.root.1
[2024-06-13 07:04:41] -rw------- 1 boinc boinc   3921920 Jun 13 07:04 result.tar.gz
07:04:42 (1813642): run_atlas exited; CPU time 111392.052262
07:04:42 (1813642): called boinc_finish(0)

</stderr_txt>
]]>

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