Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:38:43 (3767566): wrapper (7.7.26015): starting
06:38:43 (3767566): wrapper: running run_atlas (--nthreads 4)
[2024-06-13 06:38:44] Arguments: --nthreads 4
[2024-06-13 06:38:44] Threads: 4
[2024-06-13 06:38:44] Checking for CVMFS
[2024-06-13 06:38:44] No cvmfs_config command found, will try listing directly
[2024-06-13 06:38:44] CVMFS is ok
[2024-06-13 06:38:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-13 06:38:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-13 06:38:44] Further information can be found at the LHC@home message board.
[2024-06-13 06:38:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-13 06:38:44] Checking for apptainer binary...
[2024-06-13 06:38:44] which: no apptainer in ((null))
[2024-06-13 06:38:44] apptainer is not installed, using version from CVMFS
[2024-06-13 06:38:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-13 06:38:44] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2024-06-13 06:38:44] apptainer works
[2024-06-13 06:38:44] Set ATHENA_PROC_NUMBER=4
[2024-06-13 06:38:44] Set ATHENA_CORE_NUMBER=4
[2024-06-13 06:38:44] Starting ATLAS job with PandaID=6224598481
[2024-06-13 06:38:44] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-13 11:52:50]  *** The last 200 lines of the pilot log: ***
[2024-06-13 11:52:50] 2024-06-13 09:52:28,933 | INFO     | sum of square deviations: 8625843592.0
[2024-06-13 11:52:50] 2024-06-13 09:52:28,935 | INFO     | sum of deviations: 147847986157.99997
[2024-06-13 11:52:50] 2024-06-13 09:52:28,935 | INFO     | mean x: 1718262785.0
[2024-06-13 11:52:50] 2024-06-13 09:52:28,935 | INFO     | mean y: 2306112.326732673
[2024-06-13 11:52:50] 2024-06-13 09:52:28,935 | INFO     | -- intersect: -29448922598.57829
[2024-06-13 11:52:50] 2024-06-13 09:52:28,935 | INFO     | intersect: -29448922598.57829
[2024-06-13 11:52:50] 2024-06-13 09:52:28,936 | INFO     | chi2: 4.277454445207432
[2024-06-13 11:52:50] 2024-06-13 09:52:28,936 | INFO     | current chi2=4.277454445207432 (change=-0.022688922884149292 %)
[2024-06-13 11:52:50] 2024-06-13 09:52:28,936 | INFO     | right removable region: 302
[2024-06-13 11:52:50] 2024-06-13 09:52:28,936 | INFO     | model: linear, x: [1718253879.0, 1718253940.0, 1718254001.0, 1718254062.0, 1718254123.0, 1718254184.0, 1718254245.0, 1718254306.0, 1718254367.0, 1718254428.0, 1718
[2024-06-13 11:52:50] 2024-06-13 09:52:28,936 | INFO     | sum of square deviations: 8625843592.0
[2024-06-13 11:52:50] 2024-06-13 09:52:28,938 | INFO     | sum of deviations: 77568347189.00002
[2024-06-13 11:52:50] 2024-06-13 09:52:28,938 | INFO     | mean x: 1718263090.0
[2024-06-13 11:52:50] 2024-06-13 09:52:28,939 | INFO     | mean y: 2332767.9570957096
[2024-06-13 11:52:50] 2024-06-13 09:52:28,939 | INFO     | -- intersect: -15449237447.247889
[2024-06-13 11:52:50] 2024-06-13 09:52:28,939 | INFO     | intersect: -15449237447.247889
[2024-06-13 11:52:50] 2024-06-13 09:52:28,939 | INFO     | chi2: 1.7408630160774565
[2024-06-13 11:52:50] 2024-06-13 09:52:28,939 | INFO     | current chi2=1.7408630160774565 (change=59.2921906837455 %)
[2024-06-13 11:52:50] 2024-06-13 09:52:28,939 | INFO     | model: linear, x: [1718254184.0, 1718254245.0, 1718254306.0, 1718254367.0, 1718254428.0, 1718254489.0, 1718254550.0, 1718254611.0, 1718254672.0, 1718254733.0, 1718
[2024-06-13 11:52:50] 2024-06-13 09:52:28,940 | INFO     | sum of square deviations: 8205826414.5
[2024-06-13 11:52:50] 2024-06-13 09:52:28,942 | INFO     | sum of deviations: 16374316864.000002
[2024-06-13 11:52:50] 2024-06-13 09:52:28,942 | INFO     | mean x: 1718263242.5
[2024-06-13 11:52:50] 2024-06-13 09:52:28,942 | INFO     | mean y: 2354990.2416107384
[2024-06-13 11:52:50] 2024-06-13 09:52:28,942 | INFO     | -- intersect: -3426353511.1645126
[2024-06-13 11:52:50] 2024-06-13 09:52:28,942 | INFO     | intersect: -3426353511.1645126
[2024-06-13 11:52:50] 2024-06-13 09:52:28,942 | INFO     | chi2: 0.10815044395387498
[2024-06-13 11:52:50] 2024-06-13 09:52:28,942 | INFO     | current chi2=0.10815044395387498 (change=93.78753853950201 %)
[2024-06-13 11:52:50] 2024-06-13 09:52:28,943 | INFO     | model: linear, x: [1718254489.0, 1718254550.0, 1718254611.0, 1718254672.0, 1718254733.0, 1718254794.0, 1718254855.0, 1718254916.0, 1718254977.0, 1718255038.0, 1718
[2024-06-13 11:52:50] 2024-06-13 09:52:28,943 | INFO     | sum of square deviations: 7799669962.0
[2024-06-13 11:52:50] 2024-06-13 09:52:28,945 | INFO     | sum of deviations: 3628113897.000001
[2024-06-13 11:52:50] 2024-06-13 09:52:28,945 | INFO     | mean x: 1718263395.0
[2024-06-13 11:52:50] 2024-06-13 09:52:28,945 | INFO     | mean y: 2359754.423208191
[2024-06-13 11:52:50] 2024-06-13 09:52:28,945 | INFO     | -- intersect: -796911924.0552691
[2024-06-13 11:52:50] 2024-06-13 09:52:28,945 | INFO     | intersect: -796911924.0552691
[2024-06-13 11:52:50] 2024-06-13 09:52:28,945 | INFO     | chi2: 0.008358918003337967
[2024-06-13 11:52:50] 2024-06-13 09:52:28,945 | INFO     | current chi2=0.008358918003337967 (change=92.27102756332378 %)
[2024-06-13 11:52:50] 2024-06-13 09:52:28,946 | INFO     | model: linear, x: [1718254794.0, 1718254855.0, 1718254916.0, 1718254977.0, 1718255038.0, 1718255099.0, 1718255160.0, 1718255221.0, 1718255282.0, 1718255343.0, 1718
[2024-06-13 11:52:50] 2024-06-13 09:52:28,946 | INFO     | sum of square deviations: 7407141672.0
[2024-06-13 11:52:50] 2024-06-13 09:52:28,948 | INFO     | sum of deviations: 2505484598.0
[2024-06-13 11:52:50] 2024-06-13 09:52:28,948 | INFO     | mean x: 1718263547.5
[2024-06-13 11:52:50] 2024-06-13 09:52:28,948 | INFO     | mean y: 2360188.361111111
[2024-06-13 11:52:50] 2024-06-13 09:52:28,948 | INFO     | -- intersect: -578846847.2542448
[2024-06-13 11:52:50] 2024-06-13 09:52:28,948 | INFO     | intersect: -578846847.2542448
[2024-06-13 11:52:50] 2024-06-13 09:52:28,948 | INFO     | chi2: 0.007760008394194249
[2024-06-13 11:52:50] 2024-06-13 09:52:28,948 | INFO     | current chi2=0.007760008394194249 (change=7.164917862629534 %)
[2024-06-13 11:52:50] 2024-06-13 09:52:28,949 | INFO     | left removable region: 40
[2024-06-13 11:52:50] 2024-06-13 09:52:28,949 | INFO     | model: linear, x: [1718256014.0, 1718256075.0, 1718256136.0, 1718256197.0, 1718256258.0, 1718256319.0, 1718256380.0, 1718256441.0, 1718256502.0, 1718256563.0, 1718
[2024-06-13 11:52:50] 2024-06-13 09:52:28,949 | INFO     | sum of square deviations: 5576683165.5
[2024-06-13 11:52:50] 2024-06-13 09:52:28,951 | INFO     | sum of deviations: 5029703150.000001
[2024-06-13 11:52:50] 2024-06-13 09:52:28,951 | INFO     | mean x: 1718263974.5
[2024-06-13 11:52:50] 2024-06-13 09:52:28,951 | INFO     | mean y: 2358664.1679389314
[2024-06-13 11:52:50] 2024-06-13 09:52:28,951 | INFO     | -- intersect: -1547372146.8883326
[2024-06-13 11:52:50] 2024-06-13 09:52:28,951 | INFO     | intersect: -1547372146.8883326
[2024-06-13 11:52:50] 2024-06-13 09:52:28,952 | INFO     | chi2: 0.004946978617306366
[2024-06-13 11:52:50] 2024-06-13 09:52:28,952 | INFO     | -- intersect: -1547372146.8883326
[2024-06-13 11:52:50] 2024-06-13 09:52:28,952 | INFO     | current memory leak: 0.90 B/s (using 262 data points, chi2=0.00)
[2024-06-13 11:52:50] 2024-06-13 09:52:28,952 | INFO     | ..............................
[2024-06-13 11:52:50] 2024-06-13 09:52:28,952 | INFO     | . Timing measurements:
[2024-06-13 11:52:50] 2024-06-13 09:52:28,953 | INFO     | . get job = 0 s
[2024-06-13 11:52:50] 2024-06-13 09:52:28,953 | INFO     | . initial setup = 1 s
[2024-06-13 11:52:50] 2024-06-13 09:52:28,953 | INFO     | . payload setup = 7 s
[2024-06-13 11:52:50] 2024-06-13 09:52:28,953 | INFO     | . stage-in = 0 s
[2024-06-13 11:52:50] 2024-06-13 09:52:28,953 | INFO     | . payload execution = 18768 s
[2024-06-13 11:52:50] 2024-06-13 09:52:28,953 | INFO     | . stage-out = 0 s
[2024-06-13 11:52:50] 2024-06-13 09:52:28,953 | INFO     | . log creation = 0 s
[2024-06-13 11:52:50] 2024-06-13 09:52:28,953 | INFO     | ..............................
[2024-06-13 11:52:50] 2024-06-13 09:52:29,040 | INFO     | 
[2024-06-13 11:52:50] 2024-06-13 09:52:29,040 | INFO     | job summary report
[2024-06-13 11:52:50] 2024-06-13 09:52:29,040 | INFO     | --------------------------------------------------
[2024-06-13 11:52:50] 2024-06-13 09:52:29,040 | INFO     | PanDA job id: 6224598481
[2024-06-13 11:52:50] 2024-06-13 09:52:29,040 | INFO     | task id: 38920987
[2024-06-13 11:52:50] 2024-06-13 09:52:29,040 | INFO     | errors: (none)
[2024-06-13 11:52:50] 2024-06-13 09:52:29,040 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-13 11:52:50] 2024-06-13 09:52:29,040 | INFO     | pilot state: finished 
[2024-06-13 11:52:50] 2024-06-13 09:52:29,041 | INFO     | transexitcode: 0
[2024-06-13 11:52:50] 2024-06-13 09:52:29,041 | INFO     | exeerrorcode: 0
[2024-06-13 11:52:50] 2024-06-13 09:52:29,041 | INFO     | exeerrordiag: 
[2024-06-13 11:52:50] 2024-06-13 09:52:29,041 | INFO     | exitcode: 0
[2024-06-13 11:52:50] 2024-06-13 09:52:29,041 | INFO     | exitmsg: OK
[2024-06-13 11:52:50] 2024-06-13 09:52:29,041 | INFO     | cpuconsumptiontime: 71964 s
[2024-06-13 11:52:50] 2024-06-13 09:52:29,041 | INFO     | nevents: 400
[2024-06-13 11:52:50] 2024-06-13 09:52:29,041 | INFO     | neventsw: 0
[2024-06-13 11:52:50] 2024-06-13 09:52:29,041 | INFO     | pid: 3783473
[2024-06-13 11:52:50] 2024-06-13 09:52:29,041 | INFO     | pgrp: 3783473
[2024-06-13 11:52:50] 2024-06-13 09:52:29,041 | INFO     | corecount: 4
[2024-06-13 11:52:50] 2024-06-13 09:52:29,041 | INFO     | event service: False
[2024-06-13 11:52:50] 2024-06-13 09:52:29,041 | INFO     | sizes: {0: 2393305, 1: 2393447, 7: 2393653, 11: 2393681, 18779: 2426331, 18781: 2435313, 18784: 2435497, 18789: 2435667}
[2024-06-13 11:52:50] 2024-06-13 09:52:29,041 | INFO     | --------------------------------------------------
[2024-06-13 11:52:50] 2024-06-13 09:52:29,042 | INFO     | 
[2024-06-13 11:52:50] 2024-06-13 09:52:29,042 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/0
[2024-06-13 11:52:50] 2024-06-13 09:52:29,059 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-13 11:52:50] 2024-06-13 09:52:29,060 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-13 11:52:50] 2024-06-13 09:52:29,060 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-13 11:52:50] 2024-06-13 09:52:29,060 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-13 11:52:50] 2024-06-13 09:52:29,060 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-13 11:52:50] 2024-06-13 09:52:29,060 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-13 11:52:50] 2024-06-13 09:52:29,060 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-13 11:52:50] 2024-06-13 09:52:29,060 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-13 11:52:50] 2024-06-13 09:52:29,060 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-13 11:52:50] 2024-06-13 09:52:29,060 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-13 11:52:50] 2024-06-13 09:52:29,060 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-13 11:52:50] 2024-06-13 09:52:29,060 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-13 11:52:50] 2024-06-13 09:52:29,060 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-13 11:52:50] 2024-06-13 09:52:29,061 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-13 11:52:50] 2024-06-13 09:52:29,061 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-13 11:52:50] 2024-06-13 09:52:29,061 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-13 11:52:50] 2024-06-13 09:52:29,061 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-13 11:52:50] 2024-06-13 09:52:29,061 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-13 11:52:50] 2024-06-13 09:52:29,061 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-13 11:52:50] 2024-06-13 09:52:29,061 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-13 11:52:50] 2024-06-13 09:52:29,061 | INFO     | job 6224598481 has completed (purged errors)
[2024-06-13 11:52:50] 2024-06-13 09:52:29,061 | INFO     | overall cleanup function is called
[2024-06-13 11:52:50] 2024-06-13 09:52:30,068 | INFO     | --- collectZombieJob: --- 10, [3783473]
[2024-06-13 11:52:50] 2024-06-13 09:52:30,069 | INFO     | zombie collector waiting for pid 3783473
[2024-06-13 11:52:50] 2024-06-13 09:52:30,069 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-13 11:52:50] 2024-06-13 09:52:31,071 | INFO     | collected zombie processes
[2024-06-13 11:52:50] 2024-06-13 09:52:31,072 | INFO     | will now attempt to kill all subprocesses of pid=3783473
[2024-06-13 11:52:50] 2024-06-13 09:52:31,288 | INFO     | process IDs to be killed: [3783473] (in reverse order)
[2024-06-13 11:52:50] 2024-06-13 09:52:31,414 | WARNING  | found no corresponding commands to process id(s)
[2024-06-13 11:52:50] 2024-06-13 09:52:31,414 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-13 11:52:50] 2024-06-13 09:52:31,430 | INFO     | did not find any defunct processes belonging to 3783473
[2024-06-13 11:52:50] 2024-06-13 09:52:31,442 | INFO     | did not find any defunct processes belonging to 3783473
[2024-06-13 11:52:50] 2024-06-13 09:52:31,442 | INFO     | ready for new job
[2024-06-13 11:52:50] 2024-06-13 09:52:31,442 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-13 11:52:50] 2024-06-13 09:52:31,444 | INFO     | *************************************
[2024-06-13 11:52:50] 2024-06-13 09:52:31,444 | INFO     | ***  PanDA Pilot version 3.7.6.8  ***
[2024-06-13 11:52:50] 2024-06-13 09:52:31,444 | INFO     | *************************************
[2024-06-13 11:52:50] 2024-06-13 09:52:31,444 | INFO     | 
[2024-06-13 11:52:50] 2024-06-13 09:52:31,451 | INFO     | architecture information:
[2024-06-13 11:52:50] 2024-06-13 09:52:31,451 | INFO     | executing command: cat /etc/os-release
[2024-06-13 11:52:50] 2024-06-13 09:52:31,464 | INFO     | cat /etc/os-release:
[2024-06-13 11:52:50] NAME="CentOS Linux"
[2024-06-13 11:52:50] VERSION="7 (Core)"
[2024-06-13 11:52:50] ID="centos"
[2024-06-13 11:52:50] ID_LIKE="rhel fedora"
[2024-06-13 11:52:50] VERSION_ID="7"
[2024-06-13 11:52:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-13 11:52:50] ANSI_COLOR="0;31"
[2024-06-13 11:52:50] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-13 11:52:50] HOME_URL="https://www.centos.org/"
[2024-06-13 11:52:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-13 11:52:50] 
[2024-06-13 11:52:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-13 11:52:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-13 11:52:50] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-13 11:52:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-13 11:52:50] 
[2024-06-13 11:52:50] 2024-06-13 09:52:31,464 | INFO     | *************************************
[2024-06-13 11:52:50] 2024-06-13 09:52:31,967 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/0
[2024-06-13 11:52:50] 2024-06-13 09:52:31,985 | INFO     | sufficient remaining disk space (3052092260352 B)
[2024-06-13 11:52:50] 2024-06-13 09:52:31,986 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-13 11:52:50] 2024-06-13 09:52:31,986 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-13 11:52:50] 2024-06-13 09:52:31,986 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-13 11:52:50] 2024-06-13 09:52:31,986 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-13 11:52:50] 2024-06-13 09:52:31,987 | INFO     | found 0 job(s) in 20 queues
[2024-06-13 11:52:50] 2024-06-13 09:52:31,987 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-13 11:52:50] 2024-06-13 09:52:31,987 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-13 11:52:50] 2024-06-13 09:52:32,251 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-06-13 11:52:50] 2024-06-13 09:52:32,252 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-06-13 11:52:50] 2024-06-13 09:52:32,252 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-13 11:52:50] 2024-06-13 09:52:32,252 | INFO     | will abort loop
[2024-06-13 11:52:50] 2024-06-13 09:52:32,488 | INFO     | all data control threads have been joined
[2024-06-13 11:52:50] 2024-06-13 09:52:32,494 | INFO     | all job control threads have been joined
[2024-06-13 11:52:50] 2024-06-13 09:52:32,990 | INFO     | [job] retrieve thread has finished
[2024-06-13 11:52:50] 2024-06-13 09:52:33,033 | INFO     | [payload] failed_post thread has finished
[2024-06-13 11:52:50] 2024-06-13 09:52:33,039 | INFO     | all payload control threads have been joined
[2024-06-13 11:52:50] 2024-06-13 09:52:33,048 | INFO     | [payload] validate_post thread has finished
[2024-06-13 11:52:50] 2024-06-13 09:52:33,257 | INFO     | [job] job monitor thread has finished
[2024-06-13 11:52:50] 2024-06-13 09:52:33,492 | INFO     | [data] control thread has finished
[2024-06-13 11:52:50] 2024-06-13 09:52:33,498 | INFO     | [job] control thread has finished
[2024-06-13 11:52:50] 2024-06-13 09:52:33,674 | INFO     | [payload] execute_payloads thread has finished
[2024-06-13 11:52:50] 2024-06-13 09:52:33,845 | INFO     | [data] copytool_in thread has finished
[2024-06-13 11:52:50] 2024-06-13 09:52:33,993 | INFO     | [data] copytool_out thread has finished
[2024-06-13 11:52:50] 2024-06-13 09:52:34,044 | INFO     | [payload] control thread has finished
[2024-06-13 11:52:50] 2024-06-13 09:52:34,049 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-13 11:52:50] 2024-06-13 09:52:34,140 | INFO     | [job] validate thread has finished
[2024-06-13 11:52:50] 2024-06-13 09:52:34,391 | INFO     | [job] create_data_payload thread has finished
[2024-06-13 11:52:50] 2024-06-13 09:52:34,478 | INFO     | [payload] validate_pre thread has finished
[2024-06-13 11:52:50] 2024-06-13 09:52:34,934 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-13 11:52:50] 2024-06-13 09:52:35,054 | INFO     | [job] queue monitor thread has finished
[2024-06-13 11:52:50] 2024-06-13 09:52:38,939 | INFO     | [data] queue_monitor thread has finished
[2024-06-13 11:52:50] 2024-06-13 09:52:42,368 | INFO     | job.realtimelogging is not enabled
[2024-06-13 11:52:50] 2024-06-13 09:52:43,372 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-13 11:52:50] 2024-06-13 09:52:44,330 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47044849554496)>', '<ExcThread(monitor, started 47045018703616)>']
[2024-06-13 11:52:50] 2024-06-13 09:52:45,043 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-13 11:52:50] 2024-06-13 09:52:45,044 | INFO     | [monitor] control thread has ended
[2024-06-13 11:52:50] 2024-06-13 09:52:49,355 | INFO     | all workflow threads have been joined
[2024-06-13 11:52:50] 2024-06-13 09:52:49,356 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-13 11:52:50] 2024-06-13 09:52:49,356 | INFO     | traces error code: 0
[2024-06-13 11:52:50] 2024-06-13 09:52:49,356 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-13 11:52:50] 2024-06-13 09:52:49,433 [wrapper] ==== pilot stdout END ====
[2024-06-13 11:52:50] 2024-06-13 09:52:49,435 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-13 11:52:50] 2024-06-13 09:52:49,437 [wrapper] pilotpid: 3773541
[2024-06-13 11:52:50] 2024-06-13 09:52:49,439 [wrapper] Pilot exit status: 0
[2024-06-13 11:52:50] 2024-06-13 09:52:49,447 [wrapper] pandaids: 6224598481
[2024-06-13 11:52:50] 2024-06-13 09:52:49,543 [wrapper] cleanup supervisor_pilot  838975 3773542
[2024-06-13 11:52:50] 2024-06-13 09:52:49,545 [wrapper] Test setup, not cleaning
[2024-06-13 11:52:50] 2024-06-13 09:52:49,547 [wrapper] ==== wrapper stdout END ====
[2024-06-13 11:52:50] 2024-06-13 09:52:49,549 [wrapper] ==== wrapper stderr END ====
[2024-06-13 11:52:50] 2024-06-13 09:52:49,553 [wrapper] apfmon messages muted
[2024-06-13 11:52:50]  *** Error codes and diagnostics ***
[2024-06-13 11:52:50]     "exeErrorCode": 0,
[2024-06-13 11:52:50]     "exeErrorDiag": "",
[2024-06-13 11:52:50]     "pilotErrorCode": 0,
[2024-06-13 11:52:50]     "pilotErrorDiag": "",
[2024-06-13 11:52:50]  *** Listing of results directory ***
[2024-06-13 11:52:50] total 968268
[2024-06-13 11:52:50] -rw-r--r-- 1 boinc boinc    469443 Jun  8 17:02 pilot3.tar.gz
[2024-06-13 11:52:50] -rwx------ 1 boinc boinc     32308 Jun  8 17:24 runpilot2-wrapper.sh
[2024-06-13 11:52:50] -rw-r--r-- 1 boinc boinc      5654 Jun  8 17:24 queuedata.json
[2024-06-13 11:52:50] -rw-r--r-- 1 boinc boinc       100 Jun 13 06:38 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-13 11:52:50] -rwxr-xr-x 1 boinc boinc      7986 Jun 13 06:38 run_atlas
[2024-06-13 11:52:50] -rw-r--r-- 1 boinc boinc       105 Jun 13 06:38 job.xml
[2024-06-13 11:52:50] -rw-r--r-- 1 boinc boinc      6643 Jun 13 06:38 init_data.xml
[2024-06-13 11:52:50] -rw-r--r-- 2 boinc boinc 641326354 Jun 13 06:38 EVNT.38776170._000917.pool.root.1
[2024-06-13 11:52:50] -rw-r--r-- 2 boinc boinc     17537 Jun 13 06:38 start_atlas.sh
[2024-06-13 11:52:50] drwxrwx--x 2 boinc boinc      4096 Jun 13 06:38 shared
[2024-06-13 11:52:50] -rw-r--r-- 2 boinc boinc    482039 Jun 13 06:38 input.tar.gz
[2024-06-13 11:52:50] -rw-r--r-- 1 boinc boinc         0 Jun 13 06:38 boinc_lockfile
[2024-06-13 11:52:50] -rw-r--r-- 1 boinc boinc      2619 Jun 13 06:38 pandaJob.out
[2024-06-13 11:52:50] -rw------- 1 boinc boinc       424 Jun 13 06:38 setup.sh.local
[2024-06-13 11:52:50] -rw------- 1 boinc boinc   1026757 Jun 13 06:38 agis_schedconf.cvmfs.json
[2024-06-13 11:52:50] -rw------- 1 boinc boinc   1324173 Jun 13 06:38 cric_ddmendpoints.json
[2024-06-13 11:52:50] drwx------ 4 boinc boinc      4096 Jun 13 06:39 pilot3
[2024-06-13 11:52:50] -rw------- 1 boinc boinc 341938792 Jun 13 11:51 HITS.38920987._052907.pool.root.1
[2024-06-13 11:52:50] -rw------- 1 boinc boinc        95 Jun 13 11:51 pilot_heartbeat.json
[2024-06-13 11:52:50] -rw-r--r-- 1 boinc boinc       531 Jun 13 11:51 boinc_task_state.xml
[2024-06-13 11:52:50] -rw------- 1 boinc boinc      1048 Jun 13 11:52 memory_monitor_summary.json
[2024-06-13 11:52:50] -rw------- 1 boinc boinc         0 Jun 13 11:52 agis_ddmendpoints.agis.ALL.json
[2024-06-13 11:52:50] -rw------- 1 boinc boinc    381418 Jun 13 11:52 log.38920987._052907.job.log.tgz.1
[2024-06-13 11:52:50] -rw------- 1 boinc boinc      7728 Jun 13 11:52 heartbeat.json
[2024-06-13 11:52:50] -rw-r--r-- 1 boinc boinc      8192 Jun 13 11:52 boinc_mmap_file
[2024-06-13 11:52:50] -rw-r--r-- 1 boinc boinc        28 Jun 13 11:52 wrapper_checkpoint.txt
[2024-06-13 11:52:50] -rw------- 1 boinc boinc      4603 Jun 13 11:52 pilotlog.txt
[2024-06-13 11:52:50] -rw------- 1 boinc boinc   1969547 Jun 13 11:52 log.38920987._052907.job.log.1
[2024-06-13 11:52:50] -rw------- 1 boinc boinc       357 Jun 13 11:52 output.list
[2024-06-13 11:52:50] -rw-r--r-- 1 boinc boinc       620 Jun 13 11:52 runtime_log
[2024-06-13 11:52:50] -rw------- 1 boinc boinc   2365440 Jun 13 11:52 result.tar.gz
[2024-06-13 11:52:50] -rw-r--r-- 1 boinc boinc     11410 Jun 13 11:52 runtime_log.err
[2024-06-13 11:52:50] -rw------- 1 boinc boinc       658 Jun 13 11:52 dhINDmZ6Ca5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmk1PKDm60mkyn.diag
[2024-06-13 11:52:50] -rw-r--r-- 1 boinc boinc     21290 Jun 13 11:52 stderr.txt
[2024-06-13 11:52:50] HITS file was successfully produced:
[2024-06-13 11:52:50] -rw------- 1 boinc boinc 341938792 Jun 13 11:51 shared/HITS.pool.root.1
[2024-06-13 11:52:50]  *** Contents of shared directory: ***
[2024-06-13 11:52:50] total 963036
[2024-06-13 11:52:50] -rw-r--r-- 2 boinc boinc 641326354 Jun 13 06:38 ATLAS.root_0
[2024-06-13 11:52:50] -rw-r--r-- 2 boinc boinc     17537 Jun 13 06:38 start_atlas.sh
[2024-06-13 11:52:50] -rw-r--r-- 2 boinc boinc    482039 Jun 13 06:38 input.tar.gz
[2024-06-13 11:52:50] -rw------- 1 boinc boinc 341938792 Jun 13 11:51 HITS.pool.root.1
[2024-06-13 11:52:50] -rw------- 1 boinc boinc   2365440 Jun 13 11:52 result.tar.gz
11:52:51 (3767566): run_atlas exited; CPU time 71512.573864
11:52:51 (3767566): called boinc_finish(0)

</stderr_txt>
]]>

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