Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:25:35 (3505920): wrapper (7.7.26015): starting
14:25:35 (3505920): wrapper: running run_atlas (--nthreads 4)
[2024-06-13 14:25:35] Arguments: --nthreads 4
[2024-06-13 14:25:35] Threads: 4
[2024-06-13 14:25:35] Checking for CVMFS
[2024-06-13 14:25:35] No cvmfs_config command found, will try listing directly
[2024-06-13 14:25:35] CVMFS is ok
[2024-06-13 14:25:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-13 14:25:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-13 14:25:35] Further information can be found at the LHC@home message board.
[2024-06-13 14:25:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-13 14:25:35] Checking for apptainer binary...
[2024-06-13 14:25:35] which: no apptainer in ((null))
[2024-06-13 14:25:35] apptainer is not installed, using version from CVMFS
[2024-06-13 14:25:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-13 14:25:36] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2024-06-13 14:25:36] apptainer works
[2024-06-13 14:25:36] Set ATHENA_PROC_NUMBER=4
[2024-06-13 14:25:36] Set ATHENA_CORE_NUMBER=4
[2024-06-13 14:25:36] Starting ATLAS job with PandaID=6224208897
[2024-06-13 14:25:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-13 23:45:14]  *** The last 200 lines of the pilot log: ***
[2024-06-13 23:45:14] 2024-06-13 19:38:49,295 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-13 23:45:14] 2024-06-13 19:38:49,303 | INFO     | fitting pss+swap vs Time
[2024-06-13 23:45:14] 2024-06-13 19:38:49,304 | INFO     | model: linear, x: [1718281571.0, 1718281632.0, 1718281693.0, 1718281754.0, 1718281815.0, 1718281876.0, 1718281937.0, 1718281998.0, 1718282059.0, 1718282120.0, 1718
[2024-06-13 23:45:14] 2024-06-13 19:38:49,304 | INFO     | sum of square deviations: 23972030862.5
[2024-06-13 23:45:14] 2024-06-13 19:38:49,307 | INFO     | sum of deviations: 97595253346.00003
[2024-06-13 23:45:14] 2024-06-13 19:38:49,307 | INFO     | mean x: 1718294533.5
[2024-06-13 23:45:14] 2024-06-13 19:38:49,307 | INFO     | mean y: 2340024.7699530516
[2024-06-13 23:45:14] 2024-06-13 19:38:49,307 | INFO     | -- intersect: -6993203710.421558
[2024-06-13 23:45:14] 2024-06-13 19:38:49,307 | INFO     | intersect: -6993203710.421558
[2024-06-13 23:45:14] 2024-06-13 19:38:49,307 | INFO     | chi2: 4.324467381403179
[2024-06-13 23:45:14] 2024-06-13 19:38:49,308 | INFO     | model: linear, x: [1718281571.0, 1718281632.0, 1718281693.0, 1718281754.0, 1718281815.0, 1718281876.0, 1718281937.0, 1718281998.0, 1718282059.0, 1718282120.0, 1718
[2024-06-13 23:45:14] 2024-06-13 19:38:49,308 | INFO     | sum of square deviations: 23137810570.0
[2024-06-13 23:45:14] 2024-06-13 19:38:49,310 | INFO     | sum of deviations: 122392708179.00003
[2024-06-13 23:45:14] 2024-06-13 19:38:49,311 | INFO     | mean x: 1718294381.0
[2024-06-13 23:45:14] 2024-06-13 19:38:49,311 | INFO     | mean y: 2344511.8408551067
[2024-06-13 23:45:14] 2024-06-13 19:38:49,311 | INFO     | -- intersect: -9086964180.660404
[2024-06-13 23:45:14] 2024-06-13 19:38:49,311 | INFO     | intersect: -9086964180.660404
[2024-06-13 23:45:14] 2024-06-13 19:38:49,311 | INFO     | chi2: 3.583282912511886
[2024-06-13 23:45:14] 2024-06-13 19:38:49,311 | INFO     | current chi2=3.583282912511886 (change=17.13932384086563 %)
[2024-06-13 23:45:14] 2024-06-13 19:38:49,311 | INFO     | right removable region: 420
[2024-06-13 23:45:14] 2024-06-13 19:38:49,312 | INFO     | model: linear, x: [1718281876.0, 1718281937.0, 1718281998.0, 1718282059.0, 1718282120.0, 1718282181.0, 1718282242.0, 1718282303.0, 1718282364.0, 1718282425.0, 1718
[2024-06-13 23:45:14] 2024-06-13 19:38:49,312 | INFO     | sum of square deviations: 23137810570.0
[2024-06-13 23:45:14] 2024-06-13 19:38:49,314 | INFO     | sum of deviations: 3221716708.0000153
[2024-06-13 23:45:14] 2024-06-13 19:38:49,314 | INFO     | mean x: 1718294686.0
[2024-06-13 23:45:14] 2024-06-13 19:38:49,314 | INFO     | mean y: 2357246.3325415677
[2024-06-13 23:45:14] 2024-06-13 19:38:49,315 | INFO     | -- intersect: -236898697.19789422
[2024-06-13 23:45:14] 2024-06-13 19:38:49,315 | INFO     | intersect: -236898697.19789422
[2024-06-13 23:45:14] 2024-06-13 19:38:49,315 | INFO     | chi2: 2.111634995178486
[2024-06-13 23:45:14] 2024-06-13 19:38:49,315 | INFO     | current chi2=2.111634995178486 (change=51.17005612623411 %)
[2024-06-13 23:45:14] 2024-06-13 19:38:49,315 | INFO     | model: linear, x: [1718282181.0, 1718282242.0, 1718282303.0, 1718282364.0, 1718282425.0, 1718282486.0, 1718282547.0, 1718282608.0, 1718282669.0, 1718282730.0, 1718
[2024-06-13 23:45:14] 2024-06-13 19:38:49,315 | INFO     | sum of square deviations: 22323172040.0
[2024-06-13 23:45:14] 2024-06-13 19:38:49,318 | INFO     | sum of deviations: -67028365656.500015
[2024-06-13 23:45:14] 2024-06-13 19:38:49,318 | INFO     | mean x: 1718294838.5
[2024-06-13 23:45:14] 2024-06-13 19:38:49,318 | INFO     | mean y: 2370396.9014423075
[2024-06-13 23:45:14] 2024-06-13 19:38:49,318 | INFO     | -- intersect: 5161784772.881616
[2024-06-13 23:45:14] 2024-06-13 19:38:49,318 | INFO     | intersect: 5161784772.881616
[2024-06-13 23:45:14] 2024-06-13 19:38:49,319 | INFO     | chi2: 0.9921565302101423
[2024-06-13 23:45:14] 2024-06-13 19:38:49,319 | INFO     | current chi2=0.9921565302101423 (change=53.014771374998915 %)
[2024-06-13 23:45:14] 2024-06-13 19:38:49,319 | INFO     | model: linear, x: [1718282486.0, 1718282547.0, 1718282608.0, 1718282669.0, 1718282730.0, 1718282791.0, 1718282852.0, 1718282913.0, 1718282974.0, 1718283035.0, 1718
[2024-06-13 23:45:14] 2024-06-13 19:38:49,319 | INFO     | sum of square deviations: 21527882710.0
[2024-06-13 23:45:14] 2024-06-13 19:38:49,322 | INFO     | sum of deviations: -72112874653.0
[2024-06-13 23:45:14] 2024-06-13 19:38:49,322 | INFO     | mean x: 1718294991.0
[2024-06-13 23:45:14] 2024-06-13 19:38:49,322 | INFO     | mean y: 2371359.0802919706
[2024-06-13 23:45:14] 2024-06-13 19:38:49,322 | INFO     | -- intersect: 5758217996.302181
[2024-06-13 23:45:14] 2024-06-13 19:38:49,322 | INFO     | intersect: 5758217996.302181
[2024-06-13 23:45:14] 2024-06-13 19:38:49,322 | INFO     | chi2: 0.953584655319949
[2024-06-13 23:45:14] 2024-06-13 19:38:49,322 | INFO     | current chi2=0.953584655319949 (change=3.8876803927323498 %)
[2024-06-13 23:45:14] 2024-06-13 19:38:49,322 | INFO     | left removable region: 30
[2024-06-13 23:45:14] 2024-06-13 19:38:49,323 | INFO     | model: linear, x: [1718283401.0, 1718283462.0, 1718283523.0, 1718283584.0, 1718283645.0, 1718283706.0, 1718283767.0, 1718283828.0, 1718283889.0, 1718283950.0, 1718
[2024-06-13 23:45:14] 2024-06-13 19:38:49,323 | INFO     | sum of square deviations: 18393712317.5
[2024-06-13 23:45:14] 2024-06-13 19:38:49,325 | INFO     | sum of deviations: -6156139886.0
[2024-06-13 23:45:14] 2024-06-13 19:38:49,325 | INFO     | mean x: 1718295265.5
[2024-06-13 23:45:14] 2024-06-13 19:38:49,325 | INFO     | mean y: 2368070.3435897436
[2024-06-13 23:45:14] 2024-06-13 19:38:49,325 | INFO     | -- intersect: 577459484.0439883
[2024-06-13 23:45:14] 2024-06-13 19:38:49,325 | INFO     | intersect: 577459484.0439883
[2024-06-13 23:45:14] 2024-06-13 19:38:49,326 | INFO     | chi2: 0.08147967764457748
[2024-06-13 23:45:14] 2024-06-13 19:38:49,326 | INFO     | -- intersect: 577459484.0439883
[2024-06-13 23:45:14] 2024-06-13 19:38:49,326 | INFO     | current memory leak: -0.33 B/s (using 390 data points, chi2=0.08)
[2024-06-13 23:45:14] 2024-06-13 19:38:49,326 | INFO     | ..............................
[2024-06-13 23:45:14] 2024-06-13 19:38:49,327 | INFO     | . Timing measurements:
[2024-06-13 23:45:14] 2024-06-13 19:38:49,327 | INFO     | . get job = 0 s
[2024-06-13 23:45:14] 2024-06-13 19:38:49,327 | INFO     | . initial setup = 1 s
[2024-06-13 23:45:14] 2024-06-13 19:38:49,327 | INFO     | . payload setup = 4 s
[2024-06-13 23:45:14] 2024-06-13 19:38:49,327 | INFO     | . stage-in = 0 s
[2024-06-13 23:45:14] 2024-06-13 19:38:49,327 | INFO     | . payload execution = 25952 s
[2024-06-13 23:45:14] 2024-06-13 19:38:49,327 | INFO     | . stage-out = 0 s
[2024-06-13 23:45:14] 2024-06-13 19:38:49,327 | INFO     | . log creation = 0 s
[2024-06-13 23:45:14] 2024-06-13 19:38:49,327 | INFO     | ..............................
[2024-06-13 23:45:14] 2024-06-13 19:38:49,385 | INFO     | 
[2024-06-13 23:45:14] 2024-06-13 19:38:49,385 | INFO     | job summary report
[2024-06-13 23:45:14] 2024-06-13 19:38:49,386 | INFO     | --------------------------------------------------
[2024-06-13 23:45:14] 2024-06-13 19:38:49,386 | INFO     | PanDA job id: 6224208897
[2024-06-13 23:45:14] 2024-06-13 19:38:49,386 | INFO     | task id: 38920987
[2024-06-13 23:45:14] 2024-06-13 19:38:49,386 | INFO     | errors: (none)
[2024-06-13 23:45:14] 2024-06-13 19:38:49,386 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-13 23:45:14] 2024-06-13 19:38:49,386 | INFO     | pilot state: finished 
[2024-06-13 23:45:14] 2024-06-13 19:38:49,386 | INFO     | transexitcode: 0
[2024-06-13 23:45:14] 2024-06-13 19:38:49,386 | INFO     | exeerrorcode: 0
[2024-06-13 23:45:14] 2024-06-13 19:38:49,386 | INFO     | exeerrordiag: 
[2024-06-13 23:45:14] 2024-06-13 19:38:49,386 | INFO     | exitcode: 0
[2024-06-13 23:45:14] 2024-06-13 19:38:49,387 | INFO     | exitmsg: OK
[2024-06-13 23:45:14] 2024-06-13 19:38:49,387 | INFO     | cpuconsumptiontime: 100499 s
[2024-06-13 23:45:14] 2024-06-13 19:38:49,387 | INFO     | nevents: 400
[2024-06-13 23:45:14] 2024-06-13 19:38:49,387 | INFO     | neventsw: 0
[2024-06-13 23:45:14] 2024-06-13 19:38:49,387 | INFO     | pid: 3517674
[2024-06-13 23:45:14] 2024-06-13 19:38:49,387 | INFO     | pgrp: 3517674
[2024-06-13 23:45:14] 2024-06-13 19:38:49,387 | INFO     | corecount: 4
[2024-06-13 23:45:14] 2024-06-13 19:38:49,387 | INFO     | event service: False
[2024-06-13 23:45:14] 2024-06-13 19:38:49,387 | INFO     | sizes: {0: 2379093, 5: 2379299, 11: 2379355, 25961: 2415535, 25963: 2424573, 25968: 2424687}
[2024-06-13 23:45:14] 2024-06-13 19:38:49,387 | INFO     | --------------------------------------------------
[2024-06-13 23:45:14] 2024-06-13 19:38:49,387 | INFO     | 
[2024-06-13 23:45:14] 2024-06-13 19:38:49,387 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/1
[2024-06-13 23:45:14] 2024-06-13 19:38:49,401 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-13 23:45:14] 2024-06-13 19:38:49,402 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-13 23:45:14] 2024-06-13 19:38:49,402 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-13 23:45:14] 2024-06-13 19:38:49,402 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-13 23:45:14] 2024-06-13 19:38:49,402 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-13 23:45:14] 2024-06-13 19:38:49,402 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-13 23:45:14] 2024-06-13 19:38:49,402 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-13 23:45:14] 2024-06-13 19:38:49,402 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-13 23:45:14] 2024-06-13 19:38:49,402 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-13 23:45:14] 2024-06-13 19:38:49,402 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-13 23:45:14] 2024-06-13 19:38:49,402 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-13 23:45:14] 2024-06-13 19:38:49,402 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-13 23:45:14] 2024-06-13 19:38:49,403 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-13 23:45:14] 2024-06-13 19:38:49,403 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-13 23:45:14] 2024-06-13 19:38:49,403 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-13 23:45:14] 2024-06-13 19:38:49,403 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-13 23:45:14] 2024-06-13 19:38:49,403 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-13 23:45:14] 2024-06-13 19:38:49,403 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-13 23:45:14] 2024-06-13 19:38:49,403 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-13 23:45:14] 2024-06-13 19:38:49,403 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-13 23:45:14] 2024-06-13 19:38:49,403 | INFO     | job 6224208897 has completed (purged errors)
[2024-06-13 23:45:14] 2024-06-13 19:38:49,403 | INFO     | overall cleanup function is called
[2024-06-13 23:45:14] 2024-06-13 19:38:50,409 | INFO     | --- collectZombieJob: --- 10, [3517674]
[2024-06-13 23:45:14] 2024-06-13 19:38:50,410 | INFO     | zombie collector waiting for pid 3517674
[2024-06-13 23:45:14] 2024-06-13 19:38:50,410 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-13 23:45:14] 2024-06-13 19:38:51,414 | INFO     | collected zombie processes
[2024-06-13 23:45:14] 2024-06-13 19:38:51,415 | INFO     | will now attempt to kill all subprocesses of pid=3517674
[2024-06-13 23:45:14] 2024-06-13 19:38:51,526 | INFO     | process IDs to be killed: [3517674] (in reverse order)
[2024-06-13 23:45:14] 2024-06-13 19:38:51,613 | WARNING  | found no corresponding commands to process id(s)
[2024-06-13 23:45:14] 2024-06-13 19:38:51,614 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-13 23:45:14] 2024-06-13 19:38:51,623 | INFO     | did not find any defunct processes belonging to 3517674
[2024-06-13 23:45:14] 2024-06-13 19:38:51,632 | INFO     | did not find any defunct processes belonging to 3517674
[2024-06-13 23:45:14] 2024-06-13 19:38:51,633 | INFO     | ready for new job
[2024-06-13 23:45:14] 2024-06-13 19:38:51,633 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-13 23:45:14] 2024-06-13 19:38:51,636 | INFO     | *************************************
[2024-06-13 23:45:14] 2024-06-13 19:38:51,636 | INFO     | ***  PanDA Pilot version 3.7.6.8  ***
[2024-06-13 23:45:14] 2024-06-13 19:38:51,636 | INFO     | *************************************
[2024-06-13 23:45:14] 2024-06-13 19:38:51,636 | INFO     | 
[2024-06-13 23:45:14] 2024-06-13 19:38:51,638 | INFO     | architecture information:
[2024-06-13 23:45:14] 2024-06-13 19:38:51,639 | INFO     | executing command: cat /etc/os-release
[2024-06-13 23:45:14] 2024-06-13 19:38:51,653 | INFO     | cat /etc/os-release:
[2024-06-13 23:45:14] NAME="CentOS Linux"
[2024-06-13 23:45:14] VERSION="7 (Core)"
[2024-06-13 23:45:14] ID="centos"
[2024-06-13 23:45:14] ID_LIKE="rhel fedora"
[2024-06-13 23:45:14] VERSION_ID="7"
[2024-06-13 23:45:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-13 23:45:14] ANSI_COLOR="0;31"
[2024-06-13 23:45:14] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-13 23:45:14] HOME_URL="https://www.centos.org/"
[2024-06-13 23:45:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-13 23:45:14] 
[2024-06-13 23:45:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-13 23:45:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-13 23:45:14] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-13 23:45:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-13 23:45:14] 
[2024-06-13 23:45:14] 2024-06-13 19:38:51,653 | INFO     | *************************************
[2024-06-13 23:45:14] 2024-06-13 19:38:52,156 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/1
[2024-06-13 23:45:14] 2024-06-13 19:38:52,171 | INFO     | sufficient remaining disk space (1625852739584 B)
[2024-06-13 23:45:14] 2024-06-13 19:38:52,171 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-13 23:45:14] 2024-06-13 19:38:52,171 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-13 23:45:14] 2024-06-13 19:38:52,171 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-13 23:45:14] 2024-06-13 19:38:52,172 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-13 23:45:14] 2024-06-13 19:38:52,172 | INFO     | found 0 job(s) in 20 queues
[2024-06-13 23:45:14] 2024-06-13 19:38:52,172 | INFO     | aborting loop
[2024-06-13 23:45:14] 2024-06-13 19:38:52,172 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-13 23:45:14] 2024-06-13 19:38:52,173 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-13 23:45:14] 2024-06-13 19:38:52,535 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-13 23:45:14] 2024-06-13 19:38:52,638 | INFO     | all data control threads have been joined
[2024-06-13 23:45:14] 2024-06-13 19:38:53,020 | INFO     | all payload control threads have been joined
[2024-06-13 23:45:14] 2024-06-13 19:38:53,177 | INFO     | [job] retrieve thread has finished
[2024-06-13 23:45:14] 2024-06-13 19:38:53,177 | INFO     | [job] job monitor thread has finished
[2024-06-13 23:45:14] 2024-06-13 19:38:53,296 | INFO     | [payload] validate_pre thread has finished
[2024-06-13 23:45:14] 2024-06-13 19:38:53,299 | INFO     | [job] validate thread has finished
[2024-06-13 23:45:14] 2024-06-13 19:38:53,644 | INFO     | [data] control thread has finished
[2024-06-13 23:45:14] 2024-06-13 19:38:53,707 | INFO     | all job control threads have been joined
[2024-06-13 23:45:14] 2024-06-13 19:38:53,716 | INFO     | [payload] validate_post thread has finished
[2024-06-13 23:45:14] 2024-06-13 19:38:53,723 | INFO     | [data] copytool_in thread has finished
[2024-06-13 23:45:14] 2024-06-13 19:38:53,823 | INFO     | [job] create_data_payload thread has finished
[2024-06-13 23:45:14] 2024-06-13 19:38:54,026 | INFO     | [payload] control thread has finished
[2024-06-13 23:45:14] 2024-06-13 19:38:54,174 | INFO     | [payload] failed_post thread has finished
[2024-06-13 23:45:14] 2024-06-13 19:38:54,394 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-13 23:45:14] 2024-06-13 19:38:54,524 | INFO     | [payload] execute_payloads thread has finished
[2024-06-13 23:45:14] 2024-06-13 19:38:54,541 | INFO     | [data] copytool_out thread has finished
[2024-06-13 23:45:14] 2024-06-13 19:38:54,712 | INFO     | [job] control thread has finished
[2024-06-13 23:45:14] 2024-06-13 19:38:55,091 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-13 23:45:14] 2024-06-13 19:38:55,398 | INFO     | [job] queue monitor thread has finished
[2024-06-13 23:45:14] 2024-06-13 19:38:59,097 | INFO     | [data] queue_monitor thread has finished
[2024-06-13 23:45:14] 2024-06-13 19:39:03,101 | INFO     | job.realtimelogging is not enabled
[2024-06-13 23:45:14] 2024-06-13 19:39:04,105 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-13 23:45:14] 2024-06-13 19:39:04,596 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47037273396288)>', '<ExcThread(monitor, started 47037453051648)>']
[2024-06-13 23:45:14] 2024-06-13 19:39:05,237 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-13 23:45:14] 2024-06-13 19:39:05,238 | INFO     | [monitor] control thread has ended
[2024-06-13 23:45:14] 2024-06-13 19:39:09,622 | INFO     | all workflow threads have been joined
[2024-06-13 23:45:14] 2024-06-13 19:39:09,622 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-13 23:45:14] 2024-06-13 19:39:09,623 | INFO     | traces error code: 0
[2024-06-13 23:45:14] 2024-06-13 19:39:09,623 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-13 23:45:14] 2024-06-13 19:39:09,690 [wrapper] ==== pilot stdout END ====
[2024-06-13 23:45:14] 2024-06-13 19:39:09,693 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-13 23:45:14] 2024-06-13 19:39:09,695 [wrapper] pilotpid: 3510447
[2024-06-13 23:45:14] 2024-06-13 19:39:09,697 [wrapper] Pilot exit status: 0
[2024-06-13 23:45:14] 2024-06-13 19:39:09,704 [wrapper] pandaids: 6224208897
[2024-06-13 23:45:14] 2024-06-13 19:39:09,752 [wrapper] cleanup supervisor_pilot 4124524 3510448
[2024-06-13 23:45:14] 2024-06-13 19:39:09,755 [wrapper] Test setup, not cleaning
[2024-06-13 23:45:14] 2024-06-13 19:39:09,757 [wrapper] ==== wrapper stdout END ====
[2024-06-13 23:45:14] 2024-06-13 19:39:09,759 [wrapper] ==== wrapper stderr END ====
[2024-06-13 23:45:14] 2024-06-13 19:39:09,763 [wrapper] apfmon messages muted
[2024-06-13 23:45:14]  *** Error codes and diagnostics ***
[2024-06-13 23:45:14]     "exeErrorCode": 0,
[2024-06-13 23:45:14]     "exeErrorDiag": "",
[2024-06-13 23:45:14]     "pilotErrorCode": 0,
[2024-06-13 23:45:14]     "pilotErrorDiag": "",
[2024-06-13 23:45:14]  *** Listing of results directory ***
[2024-06-13 23:45:14] total 959852
[2024-06-13 23:45:14] -rw-r--r-- 1 boinc boinc    469443 Jun  8 01:38 pilot3.tar.gz
[2024-06-13 23:45:14] -rw-r--r-- 1 boinc boinc      5654 Jun  8 01:42 queuedata.json
[2024-06-13 23:45:14] -rwx------ 1 boinc boinc     32308 Jun  8 01:44 runpilot2-wrapper.sh
[2024-06-13 23:45:14] -rw-r--r-- 1 boinc boinc       100 Jun 13 14:25 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-13 23:45:14] -rwxr-xr-x 1 boinc boinc      7986 Jun 13 14:25 run_atlas
[2024-06-13 23:45:14] -rw-r--r-- 1 boinc boinc       105 Jun 13 14:25 job.xml
[2024-06-13 23:45:14] -rw-r--r-- 1 boinc boinc      6457 Jun 13 14:25 init_data.xml
[2024-06-13 23:45:14] -rw-r--r-- 2 boinc boinc 637013279 Jun 13 14:25 EVNT.38776170._000759.pool.root.1
[2024-06-13 23:45:14] drwxrwx--x 2 boinc boinc      4096 Jun 13 14:25 shared
[2024-06-13 23:45:14] -rw-r--r-- 2 boinc boinc    482036 Jun 13 14:25 input.tar.gz
[2024-06-13 23:45:14] -rw-r--r-- 2 boinc boinc     17537 Jun 13 14:25 start_atlas.sh
[2024-06-13 23:45:14] -rw-r--r-- 1 boinc boinc         0 Jun 13 14:25 boinc_lockfile
[2024-06-13 23:45:14] -rw-r--r-- 1 boinc boinc      2620 Jun 13 14:25 pandaJob.out
[2024-06-13 23:45:14] -rw------- 1 boinc boinc       424 Jun 13 14:25 setup.sh.local
[2024-06-13 23:45:14] -rw------- 1 boinc boinc   1024849 Jun 13 14:25 agis_schedconf.cvmfs.json
[2024-06-13 23:45:14] -rw------- 1 boinc boinc   1316790 Jun 13 14:25 cric_ddmendpoints.json
[2024-06-13 23:45:14] drwx------ 4 boinc boinc      4096 Jun 13 14:25 pilot3
[2024-06-13 23:45:14] -rw------- 1 boinc boinc        95 Jun 13 21:37 pilot_heartbeat.json
[2024-06-13 23:45:14] -rw------- 1 boinc boinc 335679842 Jun 13 21:38 HITS.38920987._051602.pool.root.1
[2024-06-13 23:45:14] -rw-r--r-- 1 boinc boinc       532 Jun 13 21:38 boinc_task_state.xml
[2024-06-13 23:45:14] -rw------- 1 boinc boinc      1052 Jun 13 21:38 memory_monitor_summary.json
[2024-06-13 23:45:14] -rw------- 1 boinc boinc         0 Jun 13 21:38 agis_ddmendpoints.agis.ALL.json
[2024-06-13 23:45:14] -rw------- 1 boinc boinc    481236 Jun 13 21:38 log.38920987._051602.job.log.tgz.1
[2024-06-13 23:45:14] -rw------- 1 boinc boinc      7773 Jun 13 21:38 heartbeat.json
[2024-06-13 23:45:14] -rw------- 1 boinc boinc      4417 Jun 13 21:39 pilotlog.txt
[2024-06-13 23:45:14] -rw------- 1 boinc boinc   2848309 Jun 13 21:39 log.38920987._051602.job.log.1
[2024-06-13 23:45:14] -rw------- 1 boinc boinc       357 Jun 13 21:39 output.list
[2024-06-13 23:45:14] -rw-r--r-- 1 boinc boinc       620 Jun 13 21:39 runtime_log
[2024-06-13 23:45:14] -rw------- 1 boinc boinc   3348480 Jun 13 21:39 result.tar.gz
[2024-06-13 23:45:14] -rw-r--r-- 1 boinc boinc     11410 Jun 13 21:39 runtime_log.err
[2024-06-13 23:45:14] -rw------- 1 boinc boinc       661 Jun 13 21:39 dHBODmCRyZ5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmNEWKDmepf5Sm.diag
[2024-06-13 23:45:14] -rw-r--r-- 1 boinc boinc        29 Jun 13 23:45 wrapper_checkpoint.txt
[2024-06-13 23:45:14] -rw-r--r-- 1 boinc boinc      8192 Jun 13 23:45 boinc_mmap_file
[2024-06-13 23:45:14] -rw-r--r-- 1 boinc boinc     21302 Jun 13 23:45 stderr.txt
[2024-06-13 23:45:14] HITS file was successfully produced:
[2024-06-13 23:45:14] -rw------- 1 boinc boinc 335679842 Jun 13 21:38 shared/HITS.pool.root.1
[2024-06-13 23:45:14]  *** Contents of shared directory: ***
[2024-06-13 23:45:14] total 953672
[2024-06-13 23:45:14] -rw-r--r-- 2 boinc boinc 637013279 Jun 13 14:25 ATLAS.root_0
[2024-06-13 23:45:14] -rw-r--r-- 2 boinc boinc    482036 Jun 13 14:25 input.tar.gz
[2024-06-13 23:45:14] -rw-r--r-- 2 boinc boinc     17537 Jun 13 14:25 start_atlas.sh
[2024-06-13 23:45:14] -rw------- 1 boinc boinc 335679842 Jun 13 21:38 HITS.pool.root.1
[2024-06-13 23:45:14] -rw------- 1 boinc boinc   3348480 Jun 13 21:39 result.tar.gz
23:45:16 (3505920): run_atlas exited; CPU time 100070.432669
23:45:16 (3505920): called boinc_finish(0)

</stderr_txt>
]]>

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