Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:52:01 (3761653): wrapper (7.7.26015): starting
12:52:01 (3761653): wrapper: running run_atlas (--nthreads 4)
[2024-06-12 12:52:01] Arguments: --nthreads 4
[2024-06-12 12:52:01] Threads: 4
[2024-06-12 12:52:01] Checking for CVMFS
[2024-06-12 12:52:01] No cvmfs_config command found, will try listing directly
[2024-06-12 12:52:01] CVMFS is ok
[2024-06-12 12:52:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-12 12:52:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-12 12:52:01] Further information can be found at the LHC@home message board.
[2024-06-12 12:52:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-12 12:52:01] Checking for apptainer binary...
[2024-06-12 12:52:01] which: no apptainer in ((null))
[2024-06-12 12:52:01] apptainer is not installed, using version from CVMFS
[2024-06-12 12:52:01] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-12 12:52:02] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot68/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2024-06-12 12:52:02] apptainer works
[2024-06-12 12:52:02] Set ATHENA_PROC_NUMBER=4
[2024-06-12 12:52:02] Set ATHENA_CORE_NUMBER=4
[2024-06-12 12:52:02] Starting ATLAS job with PandaID=6223920990
[2024-06-12 12:52:02] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot68/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-12 22:12:00]  *** The last 200 lines of the pilot log: ***
[2024-06-12 22:12:00] 2024-06-12 20:11:43,121 | INFO     | right removable region: 544
[2024-06-12 22:12:00] 2024-06-12 20:11:43,121 | INFO     | model: linear, x: [1718189864.0, 1718189925.0, 1718189986.0, 1718190047.0, 1718190108.0, 1718190169.0, 1718190230.0, 1718190291.0, 1718190352.0, 1718190413.0, 1718
[2024-06-12 22:12:00] 2024-06-12 20:11:43,121 | INFO     | sum of square deviations: 50195694640.0
[2024-06-12 22:12:00] 2024-06-12 20:11:43,127 | INFO     | sum of deviations: 187730402746.0
[2024-06-12 22:12:00] 2024-06-12 20:11:43,127 | INFO     | mean x: 1718206456.0
[2024-06-12 22:12:00] 2024-06-12 20:11:43,127 | INFO     | mean y: 2336127.480733945
[2024-06-12 22:12:00] 2024-06-12 20:11:43,127 | INFO     | -- intersect: -6423704836.769927
[2024-06-12 22:12:00] 2024-06-12 20:11:43,127 | INFO     | intersect: -6423704836.769927
[2024-06-12 22:12:00] 2024-06-12 20:11:43,127 | INFO     | chi2: 1.5989307560760473
[2024-06-12 22:12:00] 2024-06-12 20:11:43,128 | INFO     | current chi2=1.5989307560760473 (change=60.08563144276135 %)
[2024-06-12 22:12:00] 2024-06-12 20:11:43,128 | INFO     | model: linear, x: [1718190169.0, 1718190230.0, 1718190291.0, 1718190352.0, 1718190413.0, 1718190474.0, 1718190535.0, 1718190596.0, 1718190657.0, 1718190718.0, 1718
[2024-06-12 22:12:00] 2024-06-12 20:11:43,128 | INFO     | sum of square deviations: 48826794555.0
[2024-06-12 22:12:00] 2024-06-12 20:11:43,134 | INFO     | sum of deviations: 80422897271.99998
[2024-06-12 22:12:00] 2024-06-12 20:11:43,134 | INFO     | mean x: 1718206608.5
[2024-06-12 22:12:00] 2024-06-12 20:11:43,134 | INFO     | mean y: 2348081.933333333
[2024-06-12 22:12:00] 2024-06-12 20:11:43,134 | INFO     | -- intersect: -2827720015.4473634
[2024-06-12 22:12:00] 2024-06-12 20:11:43,134 | INFO     | intersect: -2827720015.4473634
[2024-06-12 22:12:00] 2024-06-12 20:11:43,135 | INFO     | chi2: 0.08308000756173732
[2024-06-12 22:12:00] 2024-06-12 20:11:43,135 | INFO     | current chi2=0.08308000756173732 (change=94.80402717590944 %)
[2024-06-12 22:12:00] 2024-06-12 20:11:43,135 | INFO     | model: linear, x: [1718190474.0, 1718190535.0, 1718190596.0, 1718190657.0, 1718190718.0, 1718190779.0, 1718190840.0, 1718190901.0, 1718190962.0, 1718191023.0, 1718
[2024-06-12 22:12:00] 2024-06-12 20:11:43,135 | INFO     | sum of square deviations: 47483011220.0
[2024-06-12 22:12:00] 2024-06-12 20:11:43,141 | INFO     | sum of deviations: 60510101558.00001
[2024-06-12 22:12:00] 2024-06-12 20:11:43,141 | INFO     | mean x: 1718206761.0
[2024-06-12 22:12:00] 2024-06-12 20:11:43,141 | INFO     | mean y: 2350336.5626168223
[2024-06-12 22:12:00] 2024-06-12 20:11:43,141 | INFO     | -- intersect: -2187251016.309465
[2024-06-12 22:12:00] 2024-06-12 20:11:43,141 | INFO     | intersect: -2187251016.309465
[2024-06-12 22:12:00] 2024-06-12 20:11:43,141 | INFO     | chi2: 0.018257369068307775
[2024-06-12 22:12:00] 2024-06-12 20:11:43,141 | INFO     | current chi2=0.018257369068307775 (change=78.02435314568238 %)
[2024-06-12 22:12:00] 2024-06-12 20:11:43,142 | INFO     | model: linear, x: [1718190779.0, 1718190840.0, 1718190901.0, 1718190962.0, 1718191023.0, 1718191084.0, 1718191145.0, 1718191206.0, 1718191267.0, 1718191328.0, 1718
[2024-06-12 22:12:00] 2024-06-12 20:11:43,142 | INFO     | sum of square deviations: 46164112072.5
[2024-06-12 22:12:00] 2024-06-12 20:11:43,147 | INFO     | sum of deviations: 54825611506.5
[2024-06-12 22:12:00] 2024-06-12 20:11:43,147 | INFO     | mean x: 1718206913.5
[2024-06-12 22:12:00] 2024-06-12 20:11:43,147 | INFO     | mean y: 2350992.6811320754
[2024-06-12 22:12:00] 2024-06-12 20:11:43,147 | INFO     | -- intersect: -2038232926.2598653
[2024-06-12 22:12:00] 2024-06-12 20:11:43,148 | INFO     | intersect: -2038232926.2598653
[2024-06-12 22:12:00] 2024-06-12 20:11:43,148 | INFO     | chi2: 0.013618812435937417
[2024-06-12 22:12:00] 2024-06-12 20:11:43,148 | INFO     | current chi2=0.013618812435937417 (change=25.406489922045992 %)
[2024-06-12 22:12:00] 2024-06-12 20:11:43,149 | INFO     | model: linear, x: [1718191084.0, 1718191145.0, 1718191206.0, 1718191267.0, 1718191328.0, 1718191389.0, 1718191450.0, 1718191511.0, 1718191572.0, 1718191633.0, 1718
[2024-06-12 22:12:00] 2024-06-12 20:11:43,149 | INFO     | sum of square deviations: 44869864550.0
[2024-06-12 22:12:00] 2024-06-12 20:11:43,154 | INFO     | sum of deviations: 48616608807.00001
[2024-06-12 22:12:00] 2024-06-12 20:11:43,154 | INFO     | mean x: 1718207066.0
[2024-06-12 22:12:00] 2024-06-12 20:11:43,154 | INFO     | mean y: 2351724.0933333333
[2024-06-12 22:12:00] 2024-06-12 20:11:43,154 | INFO     | -- intersect: -1859329865.8758354
[2024-06-12 22:12:00] 2024-06-12 20:11:43,154 | INFO     | intersect: -1859329865.8758354
[2024-06-12 22:12:00] 2024-06-12 20:11:43,155 | INFO     | chi2: 0.010409657226696952
[2024-06-12 22:12:00] 2024-06-12 20:11:43,155 | INFO     | current chi2=0.010409657226696952 (change=23.564133982579307 %)
[2024-06-12 22:12:00] 2024-06-12 20:11:43,155 | INFO     | left removable region: 50
[2024-06-12 22:12:00] 2024-06-12 20:11:43,155 | INFO     | model: linear, x: [1718192609.0, 1718192670.0, 1718192731.0, 1718192792.0, 1718192853.0, 1718192914.0, 1718192975.0, 1718193036.0, 1718193097.0, 1718193158.0, 1718
[2024-06-12 22:12:00] 2024-06-12 20:11:43,155 | INFO     | sum of square deviations: 37381566007.5
[2024-06-12 22:12:00] 2024-06-12 20:11:43,160 | INFO     | sum of deviations: 28664091631.499996
[2024-06-12 22:12:00] 2024-06-12 20:11:43,160 | INFO     | mean x: 1718207645.5
[2024-06-12 22:12:00] 2024-06-12 20:11:43,160 | INFO     | mean y: 2354081.9979757085
[2024-06-12 22:12:00] 2024-06-12 20:11:43,160 | INFO     | -- intersect: -1315163257.5023139
[2024-06-12 22:12:00] 2024-06-12 20:11:43,160 | INFO     | intersect: -1315163257.5023139
[2024-06-12 22:12:00] 2024-06-12 20:11:43,161 | INFO     | chi2: 0.004260108362856128
[2024-06-12 22:12:00] 2024-06-12 20:11:43,161 | INFO     | -- intersect: -1315163257.5023139
[2024-06-12 22:12:00] 2024-06-12 20:11:43,161 | INFO     | current memory leak: 0.77 B/s (using 494 data points, chi2=0.00)
[2024-06-12 22:12:00] 2024-06-12 20:11:43,161 | INFO     | ..............................
[2024-06-12 22:12:00] 2024-06-12 20:11:43,161 | INFO     | . Timing measurements:
[2024-06-12 22:12:00] 2024-06-12 20:11:43,161 | INFO     | . get job = 0 s
[2024-06-12 22:12:00] 2024-06-12 20:11:43,161 | INFO     | . initial setup = 1 s
[2024-06-12 22:12:00] 2024-06-12 20:11:43,162 | INFO     | . payload setup = 5 s
[2024-06-12 22:12:00] 2024-06-12 20:11:43,162 | INFO     | . stage-in = 0 s
[2024-06-12 22:12:00] 2024-06-12 20:11:43,162 | INFO     | . payload execution = 33537 s
[2024-06-12 22:12:00] 2024-06-12 20:11:43,162 | INFO     | . stage-out = 0 s
[2024-06-12 22:12:00] 2024-06-12 20:11:43,162 | INFO     | . log creation = 0 s
[2024-06-12 22:12:00] 2024-06-12 20:11:43,162 | INFO     | ..............................
[2024-06-12 22:12:00] 2024-06-12 20:11:43,298 | INFO     | 
[2024-06-12 22:12:00] 2024-06-12 20:11:43,298 | INFO     | job summary report
[2024-06-12 22:12:00] 2024-06-12 20:11:43,298 | INFO     | --------------------------------------------------
[2024-06-12 22:12:00] 2024-06-12 20:11:43,298 | INFO     | PanDA job id: 6223920990
[2024-06-12 22:12:00] 2024-06-12 20:11:43,298 | INFO     | task id: 38921013
[2024-06-12 22:12:00] 2024-06-12 20:11:43,298 | INFO     | errors: (none)
[2024-06-12 22:12:00] 2024-06-12 20:11:43,298 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-12 22:12:00] 2024-06-12 20:11:43,298 | INFO     | pilot state: finished 
[2024-06-12 22:12:00] 2024-06-12 20:11:43,298 | INFO     | transexitcode: 0
[2024-06-12 22:12:00] 2024-06-12 20:11:43,299 | INFO     | exeerrorcode: 0
[2024-06-12 22:12:00] 2024-06-12 20:11:43,299 | INFO     | exeerrordiag: 
[2024-06-12 22:12:00] 2024-06-12 20:11:43,299 | INFO     | exitcode: 0
[2024-06-12 22:12:00] 2024-06-12 20:11:43,299 | INFO     | exitmsg: OK
[2024-06-12 22:12:00] 2024-06-12 20:11:43,299 | INFO     | cpuconsumptiontime: 131186 s
[2024-06-12 22:12:00] 2024-06-12 20:11:43,299 | INFO     | nevents: 400
[2024-06-12 22:12:00] 2024-06-12 20:11:43,299 | INFO     | neventsw: 0
[2024-06-12 22:12:00] 2024-06-12 20:11:43,299 | INFO     | pid: 3774375
[2024-06-12 22:12:00] 2024-06-12 20:11:43,299 | INFO     | pgrp: 3774375
[2024-06-12 22:12:00] 2024-06-12 20:11:43,299 | INFO     | corecount: 4
[2024-06-12 22:12:00] 2024-06-12 20:11:43,299 | INFO     | event service: False
[2024-06-12 22:12:00] 2024-06-12 20:11:43,299 | INFO     | sizes: {0: 2393402, 5: 2393608, 11: 2393664, 33546: 2433145, 33547: 2442127, 33550: 2442183, 33554: 2442481}
[2024-06-12 22:12:00] 2024-06-12 20:11:43,299 | INFO     | --------------------------------------------------
[2024-06-12 22:12:00] 2024-06-12 20:11:43,299 | INFO     | 
[2024-06-12 22:12:00] 2024-06-12 20:11:43,300 | INFO     | executing command: ls -lF /scratch/boinc/var/slot68/slots/1
[2024-06-12 22:12:00] 2024-06-12 20:11:43,320 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-12 22:12:00] 2024-06-12 20:11:43,320 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-12 22:12:00] 2024-06-12 20:11:43,320 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-12 22:12:00] 2024-06-12 20:11:43,320 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-12 22:12:00] 2024-06-12 20:11:43,320 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-12 22:12:00] 2024-06-12 20:11:43,320 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-12 22:12:00] 2024-06-12 20:11:43,320 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-12 22:12:00] 2024-06-12 20:11:43,320 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-12 22:12:00] 2024-06-12 20:11:43,320 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-12 22:12:00] 2024-06-12 20:11:43,320 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-12 22:12:00] 2024-06-12 20:11:43,320 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-12 22:12:00] 2024-06-12 20:11:43,320 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-12 22:12:00] 2024-06-12 20:11:43,321 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-12 22:12:00] 2024-06-12 20:11:43,321 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-12 22:12:00] 2024-06-12 20:11:43,321 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-12 22:12:00] 2024-06-12 20:11:43,321 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-12 22:12:00] 2024-06-12 20:11:43,321 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-12 22:12:00] 2024-06-12 20:11:43,321 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-12 22:12:00] 2024-06-12 20:11:43,321 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-12 22:12:00] 2024-06-12 20:11:43,321 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-12 22:12:00] 2024-06-12 20:11:43,321 | INFO     | job 6223920990 has completed (purged errors)
[2024-06-12 22:12:00] 2024-06-12 20:11:43,321 | INFO     | overall cleanup function is called
[2024-06-12 22:12:00] 2024-06-12 20:11:44,328 | INFO     | --- collectZombieJob: --- 10, [3774375]
[2024-06-12 22:12:00] 2024-06-12 20:11:44,328 | INFO     | zombie collector waiting for pid 3774375
[2024-06-12 22:12:00] 2024-06-12 20:11:44,329 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-12 22:12:00] 2024-06-12 20:11:45,334 | INFO     | collected zombie processes
[2024-06-12 22:12:00] 2024-06-12 20:11:45,334 | INFO     | will now attempt to kill all subprocesses of pid=3774375
[2024-06-12 22:12:00] 2024-06-12 20:11:45,519 | INFO     | process IDs to be killed: [3774375] (in reverse order)
[2024-06-12 22:12:00] 2024-06-12 20:11:45,697 | WARNING  | found no corresponding commands to process id(s)
[2024-06-12 22:12:00] 2024-06-12 20:11:45,697 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-12 22:12:00] 2024-06-12 20:11:45,710 | INFO     | did not find any defunct processes belonging to 3774375
[2024-06-12 22:12:00] 2024-06-12 20:11:45,719 | INFO     | did not find any defunct processes belonging to 3774375
[2024-06-12 22:12:00] 2024-06-12 20:11:45,719 | INFO     | ready for new job
[2024-06-12 22:12:00] 2024-06-12 20:11:45,719 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-12 22:12:00] 2024-06-12 20:11:45,722 | INFO     | *************************************
[2024-06-12 22:12:00] 2024-06-12 20:11:45,722 | INFO     | ***  PanDA Pilot version 3.7.6.8  ***
[2024-06-12 22:12:00] 2024-06-12 20:11:45,722 | INFO     | *************************************
[2024-06-12 22:12:00] 2024-06-12 20:11:45,722 | INFO     | 
[2024-06-12 22:12:00] 2024-06-12 20:11:45,726 | INFO     | architecture information:
[2024-06-12 22:12:00] 2024-06-12 20:11:45,727 | INFO     | executing command: cat /etc/os-release
[2024-06-12 22:12:00] 2024-06-12 20:11:45,742 | INFO     | cat /etc/os-release:
[2024-06-12 22:12:00] NAME="CentOS Linux"
[2024-06-12 22:12:00] VERSION="7 (Core)"
[2024-06-12 22:12:00] ID="centos"
[2024-06-12 22:12:00] ID_LIKE="rhel fedora"
[2024-06-12 22:12:00] VERSION_ID="7"
[2024-06-12 22:12:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-12 22:12:00] ANSI_COLOR="0;31"
[2024-06-12 22:12:00] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-12 22:12:00] HOME_URL="https://www.centos.org/"
[2024-06-12 22:12:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-12 22:12:00] 
[2024-06-12 22:12:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-12 22:12:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-12 22:12:00] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-12 22:12:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-12 22:12:00] 
[2024-06-12 22:12:00] 2024-06-12 20:11:45,743 | INFO     | *************************************
[2024-06-12 22:12:00] 2024-06-12 20:11:46,246 | INFO     | executing command: df -mP /scratch/boinc/var/slot68/slots/1
[2024-06-12 22:12:00] 2024-06-12 20:11:46,266 | INFO     | sufficient remaining disk space (3080414298112 B)
[2024-06-12 22:12:00] 2024-06-12 20:11:46,266 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-12 22:12:00] 2024-06-12 20:11:46,266 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-12 22:12:00] 2024-06-12 20:11:46,266 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-12 22:12:00] 2024-06-12 20:11:46,267 | INFO     | found 0 job(s) in 20 queues
[2024-06-12 22:12:00] 2024-06-12 20:11:46,267 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-12 22:12:00] 2024-06-12 20:11:46,267 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-12 22:12:00] 2024-06-12 20:11:46,305 | INFO     | all payload control threads have been joined
[2024-06-12 22:12:00] 2024-06-12 20:11:46,466 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-06-12 22:12:00] 2024-06-12 20:11:46,466 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-06-12 22:12:00] 2024-06-12 20:11:46,466 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-12 22:12:00] 2024-06-12 20:11:46,466 | INFO     | will abort loop
[2024-06-12 22:12:00] 2024-06-12 20:11:46,908 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-12 22:12:00] 2024-06-12 20:11:47,271 | INFO     | [job] retrieve thread has finished
[2024-06-12 22:12:00] 2024-06-12 20:11:47,311 | INFO     | [payload] control thread has finished
[2024-06-12 22:12:00] 2024-06-12 20:11:47,326 | INFO     | [job] validate thread has finished
[2024-06-12 22:12:00] 2024-06-12 20:11:47,328 | INFO     | all data control threads have been joined
[2024-06-12 22:12:00] 2024-06-12 20:11:47,372 | INFO     | all job control threads have been joined
[2024-06-12 22:12:00] 2024-06-12 20:11:47,472 | INFO     | [job] job monitor thread has finished
[2024-06-12 22:12:00] 2024-06-12 20:11:47,622 | INFO     | [payload] validate_post thread has finished
[2024-06-12 22:12:00] 2024-06-12 20:11:47,717 | INFO     | [job] create_data_payload thread has finished
[2024-06-12 22:12:00] 2024-06-12 20:11:47,907 | INFO     | [payload] validate_pre thread has finished
[2024-06-12 22:12:00] 2024-06-12 20:11:48,256 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-12 22:12:00] 2024-06-12 20:11:48,333 | INFO     | [data] control thread has finished
[2024-06-12 22:12:00] 2024-06-12 20:11:48,357 | INFO     | [payload] execute_payloads thread has finished
[2024-06-12 22:12:00] 2024-06-12 20:11:48,378 | INFO     | [job] control thread has finished
[2024-06-12 22:12:00] 2024-06-12 20:11:48,415 | INFO     | [data] copytool_in thread has finished
[2024-06-12 22:12:00] 2024-06-12 20:11:48,446 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-12 22:12:00] 2024-06-12 20:11:48,520 | INFO     | [payload] failed_post thread has finished
[2024-06-12 22:12:00] 2024-06-12 20:11:48,913 | INFO     | [data] copytool_out thread has finished
[2024-06-12 22:12:00] 2024-06-12 20:11:49,258 | INFO     | [job] queue monitor thread has finished
[2024-06-12 22:12:00] 2024-06-12 20:11:49,496 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-12 22:12:00] 2024-06-12 20:11:53,502 | INFO     | [data] queue_monitor thread has finished
[2024-06-12 22:12:00] 2024-06-12 20:11:54,218 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47824511235136)>', '<ExcThread(monitor, started 47824686688000)>']
[2024-06-12 22:12:00] 2024-06-12 20:11:54,307 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-12 22:12:00] 2024-06-12 20:11:54,307 | INFO     | [monitor] control thread has ended
[2024-06-12 22:12:00] 2024-06-12 20:11:59,244 | INFO     | all workflow threads have been joined
[2024-06-12 22:12:00] 2024-06-12 20:11:59,244 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-12 22:12:00] 2024-06-12 20:11:59,244 | INFO     | traces error code: 0
[2024-06-12 22:12:00] 2024-06-12 20:11:59,245 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-12 22:12:00] 2024-06-12 20:11:59,310 [wrapper] ==== pilot stdout END ====
[2024-06-12 22:12:00] 2024-06-12 20:11:59,313 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-12 22:12:00] 2024-06-12 20:11:59,316 [wrapper] pilotpid: 3766322
[2024-06-12 22:12:00] 2024-06-12 20:11:59,319 [wrapper] Pilot exit status: 0
[2024-06-12 22:12:00] 2024-06-12 20:11:59,330 [wrapper] pandaids: 6223920990
[2024-06-12 22:12:00] 2024-06-12 20:11:59,419 [wrapper] cleanup supervisor_pilot 1949208 3766323
[2024-06-12 22:12:00] 2024-06-12 20:11:59,421 [wrapper] Test setup, not cleaning
[2024-06-12 22:12:00] 2024-06-12 20:11:59,423 [wrapper] ==== wrapper stdout END ====
[2024-06-12 22:12:00] 2024-06-12 20:11:59,425 [wrapper] ==== wrapper stderr END ====
[2024-06-12 22:12:00] 2024-06-12 20:11:59,430 [wrapper] apfmon messages muted
[2024-06-12 22:12:00]  *** Error codes and diagnostics ***
[2024-06-12 22:12:00]     "exeErrorCode": 0,
[2024-06-12 22:12:00]     "exeErrorDiag": "",
[2024-06-12 22:12:00]     "pilotErrorCode": 0,
[2024-06-12 22:12:00]     "pilotErrorDiag": "",
[2024-06-12 22:12:00]  *** Listing of results directory ***
[2024-06-12 22:12:00] total 884768
[2024-06-12 22:12:00] -rw-r--r-- 1 boinc boinc    469443 Jun  7 18:18 pilot3.tar.gz
[2024-06-12 22:12:00] -rw-r--r-- 1 boinc boinc      5654 Jun  7 18:37 queuedata.json
[2024-06-12 22:12:00] -rwx------ 1 boinc boinc     32308 Jun  7 18:37 runpilot2-wrapper.sh
[2024-06-12 22:12:00] -rw-r--r-- 1 boinc boinc       100 Jun 12 12:51 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-12 22:12:00] -rwxr-xr-x 1 boinc boinc      7986 Jun 12 12:51 run_atlas
[2024-06-12 22:12:00] -rw-r--r-- 1 boinc boinc       105 Jun 12 12:51 job.xml
[2024-06-12 22:12:00] -rw-r--r-- 1 boinc boinc      6644 Jun 12 12:52 init_data.xml
[2024-06-12 22:12:00] -rw-r--r-- 2 boinc boinc 540415075 Jun 12 12:52 EVNT.38776210._000323.pool.root.1
[2024-06-12 22:12:00] -rw-r--r-- 2 boinc boinc     17537 Jun 12 12:52 start_atlas.sh
[2024-06-12 22:12:00] drwxrwx--x 2 boinc boinc      4096 Jun 12 12:52 shared
[2024-06-12 22:12:00] -rw-r--r-- 2 boinc boinc    482042 Jun 12 12:52 input.tar.gz
[2024-06-12 22:12:00] -rw-r--r-- 1 boinc boinc         0 Jun 12 12:52 boinc_lockfile
[2024-06-12 22:12:00] -rw-r--r-- 1 boinc boinc      2645 Jun 12 12:52 pandaJob.out
[2024-06-12 22:12:00] -rw------- 1 boinc boinc       424 Jun 12 12:52 setup.sh.local
[2024-06-12 22:12:00] -rw------- 1 boinc boinc   1026188 Jun 12 12:52 agis_schedconf.cvmfs.json
[2024-06-12 22:12:00] -rw------- 1 boinc boinc   1324173 Jun 12 12:52 cric_ddmendpoints.json
[2024-06-12 22:12:00] drwx------ 4 boinc boinc      4096 Jun 12 12:52 pilot3
[2024-06-12 22:12:00] -rw------- 1 boinc boinc        95 Jun 12 22:10 pilot_heartbeat.json
[2024-06-12 22:12:00] -rw------- 1 boinc boinc 352685393 Jun 12 22:10 HITS.38921013._017961.pool.root.1
[2024-06-12 22:12:00] -rw-r--r-- 1 boinc boinc       533 Jun 12 22:11 boinc_task_state.xml
[2024-06-12 22:12:00] -rw------- 1 boinc boinc      1047 Jun 12 22:11 memory_monitor_summary.json
[2024-06-12 22:12:00] -rw------- 1 boinc boinc         0 Jun 12 22:11 agis_ddmendpoints.agis.ALL.json
[2024-06-12 22:12:00] -rw------- 1 boinc boinc    570842 Jun 12 22:11 log.38921013._017961.job.log.tgz.1
[2024-06-12 22:12:00] -rw-r--r-- 1 boinc boinc      8192 Jun 12 22:11 boinc_mmap_file
[2024-06-12 22:12:00] -rw-r--r-- 1 boinc boinc        29 Jun 12 22:11 wrapper_checkpoint.txt
[2024-06-12 22:12:00] -rw------- 1 boinc boinc      7731 Jun 12 22:11 heartbeat.json
[2024-06-12 22:12:00] -rw------- 1 boinc boinc      4531 Jun 12 22:11 pilotlog.txt
[2024-06-12 22:12:00] -rw------- 1 boinc boinc   4106296 Jun 12 22:11 log.38921013._017961.job.log.1
[2024-06-12 22:12:00] -rw------- 1 boinc boinc       357 Jun 12 22:11 output.list
[2024-06-12 22:12:00] -rw-r--r-- 1 boinc boinc       620 Jun 12 22:11 runtime_log
[2024-06-12 22:12:00] -rw------- 1 boinc boinc   4700160 Jun 12 22:11 result.tar.gz
[2024-06-12 22:12:00] -rw-r--r-- 1 boinc boinc     11410 Jun 12 22:11 runtime_log.err
[2024-06-12 22:12:00] -rw------- 1 boinc boinc       661 Jun 12 22:11 BWKMDmxlrZ5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmULPKDmvMJxFm.diag
[2024-06-12 22:12:00] -rw-r--r-- 1 boinc boinc     21419 Jun 12 22:12 stderr.txt
[2024-06-12 22:12:00] HITS file was successfully produced:
[2024-06-12 22:12:00] -rw------- 1 boinc boinc 352685393 Jun 12 22:10 shared/HITS.pool.root.1
[2024-06-12 22:12:00]  *** Contents of shared directory: ***
[2024-06-12 22:12:00] total 877264
[2024-06-12 22:12:00] -rw-r--r-- 2 boinc boinc 540415075 Jun 12 12:52 ATLAS.root_0
[2024-06-12 22:12:00] -rw-r--r-- 2 boinc boinc     17537 Jun 12 12:52 start_atlas.sh
[2024-06-12 22:12:00] -rw-r--r-- 2 boinc boinc    482042 Jun 12 12:52 input.tar.gz
[2024-06-12 22:12:00] -rw------- 1 boinc boinc 352685393 Jun 12 22:10 HITS.pool.root.1
[2024-06-12 22:12:00] -rw------- 1 boinc boinc   4700160 Jun 12 22:11 result.tar.gz
22:12:02 (3761653): run_atlas exited; CPU time 130392.466978
22:12:02 (3761653): called boinc_finish(0)

</stderr_txt>
]]>

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